mRNA_S-ischiensis_contig11.2306.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig11.2306.1 vs. uniprot
Match: A0A6H5LBX1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBX1_9PHAE) HSP 1 Score: 223 bits (567), Expect = 1.010e-63 Identity = 150/305 (49.18%), Postives = 194/305 (63.61%), Query Frame = 3
Query: 156 ARSSKPVWLARLSLVLVATLYGTNYSAIKVLGASLDPSALMTLRFGLAAAALSPALARAGGGALRGGAEVGLWVALGYAAQAWGLQSIPASKVAVVNSLSVVLVPLLDRLRGK-ETGLRVLLGAGLAVVGLVVLESGDLAAAAPAAAHTGAWLLPQDLGTLPLLLAQPFYFGLGTWRLEQIVANNRGEAFALSAAQLAAVAAASAAWALAAGSMPT-LPELGQLLGDRPVLLG-LLWTGLATTALTLYLEATALEELSAAEAMVIYSLEPLVGASLAVGLLGEPFTNNLAVGGSLVLAACLSTAL 1061
A+ S+P W ARL+L LVA LYGTNY+AIK +G +D S+L+TLRFGLA+ AL P L G L GAEVG++ LGY AQA+ + S+PAS++A+V L+V++VP LD++ GK + G + A LA G +L+SG A P A A LLP+ L L QPF+FG TWR+E +V + G+A L+A+Q+A VA SA W++ G P L E G P L +LW GL TAL L+LE ALE +SA+EA VIYSLEPLVGA LA LGEPF + L G S VL CL ++L
Sbjct: 174 AKPSEP-WRARLTLALVACLYGTNYTAIKFMGDFMDTSSLLTLRFGLASLALLPTLQGVGMDVLLAGAEVGIYATLGYMAQAYAMTSLPASQLALVGCLAVLVVPFLDQISGKRKAGGATVSAAVLACGGAALLQSGG---AQPDAVDGAADLLPRVLSLL-----QPFFFGFSTWRMEAVVQRHPGQALPLTASQVAVVAITSALWSIGQGGFPAGLLEALMNPGTDPWALAVMLWLGLVNTALVLFLETDALESVSASEATVIYSLEPLVGAGLASSALGEPFPSPL--GASFVLGGCLCSSL 467
BLAST of mRNA_S-ischiensis_contig11.2306.1 vs. uniprot
Match: A0A7S0TJA2_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TJA2_HEMAN) HSP 1 Score: 176 bits (447), Expect = 5.040e-48 Identity = 126/305 (41.31%), Postives = 165/305 (54.10%), Query Frame = 3
Query: 180 LARLSLVLVATLYGTNYSAIKVLGASLDPSALMTLRFGLAAAALSPALARAGGGALRGGAEVGLWVALGYAAQAWGLQSIPASKVAVVNSLSVVLVPLLDRLRGKETGLRVLLGAGLAVVGLVVLESGDLAAAAPAAAHTGAWLLPQDLGTLPLLLAQPFYFGLGTWRLEQIVANNRGEAFALSAAQLAAVAAASAAWALAA-------GSMPTLPELGQLLGDRPVLLGLLWTGLATTALTLYLEATALEELSAAEAMVIYSLEPLVGASLAVGLLGEPFTNNLAVGGSLVLAACLSTALLPPG 1073
+AR ++ A LYGTN+ ++K+L +DPS LRF LAA ALSP L A+ G VGL A+GY +Q L++ AS A + SL+VV+ PLLD G E A LAV G VLE G +AP A A L QP FG G W++E + ++ G+ AL+A QLA VA + AW + + G +P + L LG V + LLWTGL TTALT++LE AL L +AE V++S EPL G + A LLGE N VGG L++AACL+ LL G
Sbjct: 17 VARGMVLCAAALYGTNFGSVKLLQGLVDPSLAAALRFSLAAVALSPMLRNLKKEAISDGLVVGLLAAVGYISQGLSLETADASTAAFLCSLAVVVCPLLDAFTGVEVKKSAWAAALLAVGGAGVLELGG--GSAPGAGDLWA-------------LVQPLAFGAGFWKMEHAMRDHPGQGGALTAVQLAVVALCTVAWTVLSPGSGTPMGELPAIDALVAALGQSQVQMALLWTGLVTTALTVWLETVALGRLPSAEVTVLFSTEPLWGTAFAAALLGEQVGANTFVGGGLIMAACLTRTLLGEG 306
BLAST of mRNA_S-ischiensis_contig11.2306.1 vs. uniprot
Match: A0A7S1EIS4_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EIS4_HEMAN) HSP 1 Score: 174 bits (441), Expect = 5.630e-46 Identity = 124/301 (41.20%), Postives = 163/301 (54.15%), Query Frame = 3
Query: 180 LARLSLVLVATLYGTNYSAIKVLGASLDPSALMTLRFGLAAAALSPALARAGGGALRGGAEVGLWVALGYAAQAWGLQSIPASKVAVVNSLSVVLVPLLDRLRGKETGLRVLLGAGLAVVGLVVLESGDLAAAAPAAAHTGAWLLPQDLGTLPLLLAQPFYFGLGTWRLEQIVANNRGEAFALSAAQLAAVAAASAAWALAA-------GSMPTLPELGQLLGDRPVLLGLLWTGLATTALTLYLEATALEELSAAEAMVIYSLEPLVGASLAVGLLGEPFTNNLAVGGSLVLAACLSTAL 1061
+AR ++ A LYGTN+ ++K+L +DPS LRF LAA ALSP L A+ G VGL A+GY +Q L++ AS A + SL+VV+ PLLD G E A LAV G VLE G +AP A A L QP FG G W++E + ++ G+ AL+A QLA VA + AW + + G +P + L LG V + LLWTGL TTALT++LE AL L +AE V++S EPL G + A LLGE N VGG L++AACL+ L
Sbjct: 135 VARGMVLCAAALYGTNFGSVKLLQGLVDPSLAAALRFSLAAVALSPMLRNLKKEAISDGLVVGLLAAVGYISQGLSLETADASTAAFLCSLAVVVCPLLDAFTGVEVKKSAWAAALLAVGGAGVLELGG--GSAPGAGDLWA-------------LVQPLAFGAGFWKMEHAMRDHPGQGGALTAVQLAVVALCTVAWTVLSPGSGTPMGELPAIDALVAALGQSQVQMALLWTGLVTTALTVWLETVALGRLPSAEVTVLFSTEPLWGTAFAAALLGEQVGANTFVGGGLIMAACLTRTL 420
BLAST of mRNA_S-ischiensis_contig11.2306.1 vs. uniprot
Match: A0A7S2LCB5_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LCB5_9STRA) HSP 1 Score: 176 bits (447), Expect = 1.120e-45 Identity = 125/310 (40.32%), Postives = 174/310 (56.13%), Query Frame = 3
Query: 174 VWLARLSLVLVATLYGTNYSAIKVLGASLDPSALMTLRFGLAAAA-----LSPALARAGG--------GALRGGAEVGLWVALGYAAQAWGLQSIPASKVAVVNSLSVVLVPLLDRLRGKETGLRVLLGAGLAVVGLVVLESGDLAAAAPAAAHTGAWLLPQDLGTLPLLLAQPFYFGLGTWRLEQIVANNRGEAFALSAAQLAAVAAASAAWALAAGS---MPTLPELGQLLGDRPVLLGLLWTGLATTALTLYLEATALEELSAAEAMVIYSLEPLVGASLAVGLLGEPFTNNLAVGGSLVLAACLST 1055
VW+ARL +++ A LYGTN++ +K+L S+ A LRF LA+ A + P G + G EVG+W A GY AQA GLQ+ ASK A + SL+VV+VP+LD L GK + ++GA +A+ G+ +LE GD H+ L DL +L QP FG+G WR+E + EA L+AAQL +VAA S ++ L G P L ++ + + D +L+ LLWTGL TTALT+YLE AL+ LSAAE +++S EPL GA+ A +L E VG +L+L T
Sbjct: 190 VWIARLLVLISAALYGTNFTYVKILSESIPVGAGAALRFSLASFATLYWLMQPVDTEHDDYEDNTSRLGVILAGLEVGMWNACGYVAQAVGLQTTDASKSAFICSLAVVVVPVLDALTGKRMTRKSIIGAIMALFGVSILEIGD------GDIHSALSLSSGDLASL----VQPLVFGMGFWRMEDAMHKYPSEAPRLTAAQLFSVAAVSISYCLLGGGGVDPPALHQIVEWVADPSILMALLWTGLITTALTIYLETLALKTLSAAETTLLFSTEPLWGAAFATFMLSEKLGFGAVVGAALILGGIYVT 489
BLAST of mRNA_S-ischiensis_contig11.2306.1 vs. uniprot
Match: A0A836CMZ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMZ2_9STRA) HSP 1 Score: 168 bits (425), Expect = 4.470e-44 Identity = 125/301 (41.53%), Postives = 163/301 (54.15%), Query Frame = 3
Query: 174 VWLARLSLVLVATLYGTNYSAIKVLGASLDPSALMTLRFGLAAAALSPALARAGGGALRGGAEVGLWVALGYAAQAWGLQSIPASKVAVVNSLSVVLVPLLDRLRGKETGLRVLLGAGLAVVGLVVLESGDLAAAAPAAAHTGAWLLPQDLGTLPLLLAQPFYFGLGTWRLEQIVANNRGEAFALSAAQLAAVAAASAAWALAAGSMPTLPELGQLLGDRPVLLG-LLWTGLATTALTLYLEATALEELSAAEAMVIYSLEPLVGASLAVGLLGEPFTN-NLAVGGSLVLAACLSTALLPP 1070
VWLAR +L+ VA LYGTNYS+IKVL D +RF +AA P L + AL GG +VG + A+GY +Q L ASK A + SL+VV VP + L G+ + LL A +A G+++LE G L P + G L + LAQP +FGLG WRL + G + L AAQ AVA AA+A A +PT + L +P L G L+WTG+ TT ++ +E AL LSAAEA V+YS EPL A L+GE + G +L+LAACL LL P
Sbjct: 87 VWLARGTLLTVAALYGTNYSSIKVLQEMWDGDGAAAVRFIIAAVCTLPWLVKLPKEALAGGLQVGAFNAIGYLSQFEALHQTTASKTAFIGSLAVVAVPCFEALSGQASAAGALLPAMVATAGVMLLELGGLT--------------PPNSGDL-VALAQPLFFGLGYWRLGAVTKQWPGLSLPLVAAQSLAVAVVVAAYAFATHGLPTPAGVTAALRAQPALGGALVWTGIMTTVVSAIMETKALRVLSAAEATVLYSTEPLFATLFAAVLVGEGLGGWSTGAGAALILAACLWRVLLKP 372
BLAST of mRNA_S-ischiensis_contig11.2306.1 vs. uniprot
Match: L1K2N7_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K2N7_GUITC) HSP 1 Score: 167 bits (422), Expect = 7.060e-44 Identity = 118/297 (39.73%), Postives = 168/297 (56.57%), Query Frame = 3
Query: 183 ARLSLVLVATLYGTNYSAIKVLGASLDPSALMTLRFGLAAAALSPALARAGGGALRGGAEVGLWVALGYAAQAWGLQSIPASKVAVVNSLSVVLVPLLDRLRGKETGLRVLLGAGLAVVGLVVLESGDLAAAAPAAAHTGAWLLPQDL-GTLPL-LLAQPFYFGLGTWRLEQIVANNRGEAFALSAAQLAAVAAASAAWALAAGSMP------TLPELGQLLGDRPVLLGLLWTGLATTALTLYLEATALEELSAAEAMVIYSLEPLVGASLAVGLLGEPFTNNLAVGGSLVLAACL 1049
ARL ++ VA LYGTN+ ++K+L +SLDPSA +RFG+A+ A+ P L ++ G E+G++ LGY AQ GLQ+ AS +A + SL+VV+ PLLD L G G + GLA+ G VLE L D+ GT L L QP FG G WR E+++ +A L+A Q+ V S W ++ M + E+ D +LL LLWTG+ATTA+T+ LE AL +L++AE V+++ EPL G + A +LGE +N +GG+L+LAACL
Sbjct: 13 ARLVILGVAALYGTNFGSVKILESSLDPSAAAFVRFGIASLAMLPLLKNLRVETIKPGLEIGMFAFLGYFAQGIGLQTCHASTMAFLCSLAVVVCPLLDVLEGSRLGAKAWTSVGLAIAGTAVLE-----------------LAGADMPGTGDLWALIQPLAFGAGFWRCERVMRELPDQAAPLTAMQILTVGMMSMMWMVSDTVMHPGSAGHVMQEILHSFHDGHLLLALLWTGIATTAITVGLETWALGKLTSAETTVLFATEPLWGTAFAHAVLGEQVGSNAYLGGTLILAACL 292
BLAST of mRNA_S-ischiensis_contig11.2306.1 vs. uniprot
Match: D8LIX0_ECTSI (EamA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIX0_ECTSI) HSP 1 Score: 163 bits (412), Expect = 4.510e-43 Identity = 111/238 (46.64%), Postives = 151/238 (63.45%), Query Frame = 3
Query: 84 GALESSSSVEKQGVASATSPTPPSARSSKPV--WLARLSLVLVATLYGTNYSAIKVLGASLDPSALMTLRFGLAAAALSPALARAGGGALRGGAEVGLWVALGYAAQAWGLQSIPASKVAVVNSLSVVLVPLLDRLRGK-ETGLRVLLGAGLAVVGLVVLESGDLAAAAPAAAHTGAWLLPQDLGTLPLLLAQPFYFGLGTWRLEQIVANNRGEAFALSAAQLAAVAAASAAWALAAG 788
G E SSS SA+S SA +KP W ARL+L LVA LYGTNY+AIK +G +D S+L+TLRFGLA+ AL PAL G L GAEVG++ LGY AQA+ ++S+PAS++A+V L+V++VP LD++ GK + G+ + A LA G +L+SG A P + A LLP+ L L QPF+FG TWR+E +V + G+A L+A+Q+A VA SA W++A G
Sbjct: 54 GVAEGSSSASSIIAPSASSTD--SANGAKPSEPWRARLTLALVACLYGTNYTAIKFMGDFMDTSSLLTLRFGLASLALLPALKGVGMDVLLAGAEVGIYATLGYMAQAYAMRSLPASQLALVGCLAVLVVPFLDQISGKRKVGVATISAAVLACGGAALLQSGG---AQPDSVDGAADLLPRVLALL-----QPFFFGFSTWRMETVVQRHPGQALPLTASQVAVVAITSALWSIAQG 281
BLAST of mRNA_S-ischiensis_contig11.2306.1 vs. uniprot
Match: A0A1E7FD72_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FD72_9STRA) HSP 1 Score: 166 bits (420), Expect = 1.100e-42 Identity = 121/308 (39.29%), Postives = 176/308 (57.14%), Query Frame = 3
Query: 174 VWLARLSLVLVATLYGTNYSAIKVLGASLDPSALMTLRFGLAAAALSPAL-ARAGGGALRG--------GAEVGLWVALGYAAQAWGLQSIPASKVAVVNSLSVVLVPLLDRLRGKETGLRVLLGAGLAVVGLVVLESGDLAAAAPA-AAHTGAWLLPQDLGTLPLLLAQPFYFGLGTWRLEQIVANNRGEAFALSAAQLAAVAAASAAWALAAGSMPTLPELGQL--LGDRPVLLGLLWTGLATTALTLYLEATALEELSAAEAMVIYSLEPLVGASLAVGLLGEPFTNNLAVGGSLVLAACLSTAL 1061
VW AR L+ A LYGTN+S +K+LG + ++LRF LA+ P L + AG + G G EVGLW ++GY +QA GL++ AS A + SL+VV VPLLD GK R +GA LAV+G+ VLE + A A+ + ++L DL L L QP FG+G W++E+ + EA L+AAQL A+ AS + L++ TL + + ++ L WTG+ T+ALT+Y+E A+E LSAAEA VI++ EP+ G + A ++ E F N AVG + +++AC + L
Sbjct: 70 VWKARSLLIGAAALYGTNFSLVKLLGDVMPEGVSLSLRFALASLVTLPWLFSEAGAELVDGDVWMATWLGFEVGLWNSVGYISQAVGLETTQASTSAFLCSLAVVTVPLLDFFTGKRIESRQWIGAILAVIGVAVLELNGAGGSGEAVASQSSSFLSTGDL----LSLVQPLAFGIGFWKVEKALERYPTEARRLTAAQLLAIFCASVGFGLSSIDASTLQSYPWMDWFTNPSIMFSLFWTGVITSALTIYMENKAMETLSAAEATVIFATEPIWGTAFAAVVMSEQFGMNSAVGAAFIMSACFYSNL 373
BLAST of mRNA_S-ischiensis_contig11.2306.1 vs. uniprot
Match: A0A835Z0F0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0F0_9STRA) HSP 1 Score: 162 bits (411), Expect = 1.960e-42 Identity = 122/293 (41.64%), Postives = 161/293 (54.95%), Query Frame = 3
Query: 177 WLARLSLVLVATLYGTNYSAIK-VLGASLDPSALMTLRFGLAAAALSPALARAGGGALRGGAEVGLWVALGYAAQAWGLQSIPASKVAVVNSLSVVLVPLLDRLRGKETGLRVLLGAGLAVVGLVVLESGDLAAAAPAAAHTGAWLLPQDLGTLPLLLAQPFYFGLGTWRLEQIVANNRGEAFALSAAQLAAVAAASAAWALAAGSMPTLPELGQLLGDRPVLLGLLWTGLATTALTLYLEATALEELSAAEAMVIYSLEPLVGASLAVGLLGEPFTNNLAVGGSLVLAACLS 1052
W R L LVA L+GTN+ +K V A + S RFG+AA A+SP L + + G E GLW+ALGY QA GLQS A+K A + SL+VV+VPL++ LRGK + A LA++G VLE GD + +G L L Q F FG+ R+E + G+A +L+A+QL AVA S WA+ S LP+L G + L L +TGL TTAL +YLE AL+ +SAAE VI++ EPL A LLGE A+G +LAACL+
Sbjct: 48 WAYRGLLALVAVLWGTNFGTVKFVQNADISASVAALSRFGIAAVAMSPFLFKGDKAVFKAGFECGLWIALGYITQAIGLQSTDANKSAFICSLTVVIVPLINWLRGKGIQWNNGIAALLALLGTGVLELGDSSV--------------PTMGDL-WSLGQAFGFGIAFTRIEHYMEKFPGQALSLAASQLLAVATVSLGWAVV-DSGGVLPDLS-FFGTPSIALALGYTGLITTALAVYLETIALQRVSAAEMSVIFATEPLWATGFASVLLGETLGPQAAIGAVFILAACLT 323
BLAST of mRNA_S-ischiensis_contig11.2306.1 vs. uniprot
Match: A0A6S8J0W1_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A6S8J0W1_9STRA) HSP 1 Score: 164 bits (416), Expect = 7.350e-42 Identity = 131/313 (41.85%), Postives = 173/313 (55.27%), Query Frame = 3
Query: 180 LARLSLVLVATLYGTNYSAIKVLGASLDPSALM-TLRFGLAAAALSP-----------------ALARAGGGALRGGAEVGLWVALGYAAQAWGLQSIPASKVAVVNSLSVVLVPLLDRLRGKETGLRVLLGAGLAVVGLVVLESGDLAAAAPAAAHTGAWLLPQDLGTLPLLLAQPFYFGLGTWRLEQIVANNRGEAFALSAAQLAAVAAASAAWALAAG-SMPTLPELGQLLGDRPVLLGLLWTGLATTALTLYLEATALEELSAAEAMVIYSLEPLVGASLAVGLLGEPFTNNLAVGGSLVLAACLSTAL 1061
+ARL L+ A LYGTN+S +K+LG + AL TLRFGLAA SP A+ G LRG EVG W + GY AQA GL + ASK A + SL+VV VPLLD GK R + G LA++G+ VLE G L+A+ A L DL ++ QP FG+ WR+EQ++ EA +AAQL AV SAA+ + ++ Q + + VLL L WTG TTALT+Y+E+TAL+ LSAAE +I S EPL G + A +LGE + +G L++AACL + L
Sbjct: 112 MARLLLIGAAALYGTNFSVVKMLGQTDMSIALSATLRFGLAALITSPWLFGKTENPNTNEVHGEAMDHRLGVTLRG-MEVGFWNSAGYIAQAVGLGTTLASKSAFLCSLAVVTVPLLDFATGKRLETRQITGIVLALLGVAVLELGGLSASDLA-------LTSGDLASM----VQPLAFGVAFWRMEQVMHKYPEEAKRATAAQLLAVFLGSAAYGFVTDPGFFDMTKIIQFVSEPTVLLSLFWTGCITTALTIYMESTALKSLSAAETTLILSTEPLWGTAFAAAVLGEQVGVDTGIGAVLIIAACLVSNL 412 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2306.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig11.2306.1 >prot_S-ischiensis_contig11.2306.1 ID=prot_S-ischiensis_contig11.2306.1|Name=mRNA_S-ischiensis_contig11.2306.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=311bp MTLRFGLAAAALSPALARAGGGALRGGAEVGLWVALGYAAQAWGLQSIPAback to top mRNA from alignment at S-ischiensis_contig11:2772349..2779896+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig11.2306.1 ID=mRNA_S-ischiensis_contig11.2306.1|Name=mRNA_S-ischiensis_contig11.2306.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=7548bp|location=Sequence derived from alignment at S-ischiensis_contig11:2772349..2779896+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig11:2772349..2779896+ >mRNA_S-ischiensis_contig11.2306.1 ID=mRNA_S-ischiensis_contig11.2306.1|Name=mRNA_S-ischiensis_contig11.2306.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1866bp|location=Sequence derived from alignment at S-ischiensis_contig11:2772349..2779896+ (Schizocladia ischiensis KU_0333)back to top |