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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 988 |
| Cds size | 765 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815579.359948-CDS-S-ischiensis_contig11:2393210..2393416 | 1622815579.359948-CDS-S-ischiensis_contig11:2393210..2393416 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 2393211..2393416 - |
| 1695739782.5696487-CDS-S-ischiensis_contig11:2393210..2393416 | 1695739782.5696487-CDS-S-ischiensis_contig11:2393210..2393416 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 2393211..2393416 - |
| 1622815579.3707213-CDS-S-ischiensis_contig11:2393887..2394030 | 1622815579.3707213-CDS-S-ischiensis_contig11:2393887..2394030 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 2393888..2394030 - |
| 1695739782.5795248-CDS-S-ischiensis_contig11:2393887..2394030 | 1695739782.5795248-CDS-S-ischiensis_contig11:2393887..2394030 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 2393888..2394030 - |
| 1622815579.3800318-CDS-S-ischiensis_contig11:2394277..2394384 | 1622815579.3800318-CDS-S-ischiensis_contig11:2394277..2394384 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 2394278..2394384 - |
| 1695739782.589657-CDS-S-ischiensis_contig11:2394277..2394384 | 1695739782.589657-CDS-S-ischiensis_contig11:2394277..2394384 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 2394278..2394384 - |
| 1622815579.3891141-CDS-S-ischiensis_contig11:2394756..2395065 | 1622815579.3891141-CDS-S-ischiensis_contig11:2394756..2395065 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 2394757..2395065 - |
| 1695739782.6029341-CDS-S-ischiensis_contig11:2394756..2395065 | 1695739782.6029341-CDS-S-ischiensis_contig11:2394756..2395065 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 2394757..2395065 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815579.398087-UTR-S-ischiensis_contig11:2395065..2395288 | 1622815579.398087-UTR-S-ischiensis_contig11:2395065..2395288 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig11 2395066..2395288 - |
| 1695739782.6126187-UTR-S-ischiensis_contig11:2395065..2395288 | 1695739782.6126187-UTR-S-ischiensis_contig11:2395065..2395288 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig11 2395066..2395288 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig11.2268.1 >prot_S-ischiensis_contig11.2268.1 ID=prot_S-ischiensis_contig11.2268.1|Name=mRNA_S-ischiensis_contig11.2268.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=255bp
MAESSGRADRAPDLQSRAARVLLRDRERGPQRQARRTVGESRPDQEDATP
ARRRPGGAGGSPLASPSLQQARKRQHNNRPLRKRQPQLRLRNGRFSYRVN
SGKVVNPGGVGAEHGAWQMTQVYAWLQAEKLGVLRSLNRRFRGIMDETSM
WVVWVELLNTLASKLVVEVPRSLPPGCNRGNLEQLAGFLGQHVTPHIGCR
LYIADIPGLATSGTVELTSESWRPGTGAGRVVPTLPSGPHASRAASQPGW
GGGCG back to topmRNA from alignment at S-ischiensis_contig11:2393211..2395288- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig11.2268.1 ID=mRNA_S-ischiensis_contig11.2268.1|Name=mRNA_S-ischiensis_contig11.2268.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2078bp|location=Sequence derived from alignment at S-ischiensis_contig11:2393211..2395288- (Schizocladia ischiensis KU_0333)
CTCAAGTTCAAACACCTCGGTTTCTCGCAAGTGGGCCCCTCTCGCGCGCC
AGGGCCGGCCTCCCCGGCATGTAGGCGATGCGTGACAACCGTACCGGCCT
TGACCCGGTGGAGAAGCGGATGTCTCGCTCTCTCTCGGCGTTGTGCGTGC
CGCGAAACTGTTGAGCTGCTCGCGGAGGACGTCCTCTCCCATTGGGGAAC
ACGAGAGGGACAAGATCACCAGGATGGCTGAATCGTCGGGTAGGGCGGAC
CGCGCGCCGGATCTTCAGTCCCGCGCCGCCCGAGTCTTGTTGCGGGACCG
CGAACGGGGCCCCCAGCGACAGGCACGTCGCACGGTTGGCGAGTCACGCC
CCGACCAAGAGGACGCTACGCCGGCCCGCCGGCGCCCCGGGGGGGCTGGA
GGGAGTCCACTGGCATCCCCGTCCCTCCAGCAAGCCCGAAAACGTCAACA
CAACAACCGTCCTTTGAGGAAGCGGCAACCTCAACTACGCCTCCGAAACG
GGCGATTCTCCTATCGCGTGAATTCGGGCAAGGTGGGAGTGTGATGCGCC
CAAGGTGGGATCAAGCGCTCCGCCGATCATATTCAAAGACCTGAATAGTC
TCCCTGGCCAGCTGTGTACGTCGCGGCTGGATGAGACTGAATGTGCCCTC
ATGATGGCCCGCTCAGGCTTTTGCTTGCAAAGTCGCCAGTTGTCGCTCTC
GTAGCCTTTGTGGCGCTGATGCGGGGGAAGGCCGGGCATGCACTTCGGCA
CGCAAACTTAGAGCAATGGGCGCTCCACGACCTTGACAGTCAACTCTACC
CCCCCCCCCCCAAAGAAGAGCTGCCGTGCCGGTAAGCTTAGCCAATCATC
GCTTGAGCAAGCTCCGTTGCCGCCTCGCCTTGATCAATCACTTGGCTGTG
CCAGGTGGTGAACCCAGGCGGGGTTGGAGCGGAGCATGGCGCGTGGCAGA
TGACCCAGGTATACGCATGGCTCCAGGCGGAGAAGTTGGGGGTTCTCCGT
TCCTTGAACCGGTGAGTTCAGAGGGCATTCATCCGACACAACTCTCTGAG
TACTATTATTCCTCGTACTTCGAAGTACACAAGAAGGATTAAAGACGAGG
ATCGTTCGGGGCCAGGGCATGCACAGAGACGTGGGTAAACACACAGTAAT
GCCTCCGCGTGCTCTATGCTGTCCGATCTTCGGTTGAGAAGGTCTGGTGT
GCGTGGGCCTTTTCATGACCGAGTGCATCCACACACGCAACATATCTGTC
CACCACAGGCGCTTCCGCGGCATCATGGATGAGACTTCCATGTGGGTGGT
GTGGGTAGAGCTGCTTAACACGTTGGCTTCCAAGCTGGTGGTGGAGGTGC
CGCGGAGCCTCCCCCCGGGGTGCAATCGAGGCAACCTGGAGCAGCTGGCC
GGTAAGTTTCGTGATACTTCCAAGTTATTTACTCCAAGAAGTCTTCCGAA
GCACGGCGCACTGCCTATTCTTGGAGCAGGCATGCTCGTTCCGTCGAATC
TTGTCGCCAGGCATGCGGGGATACGGTGGAGTTTTCTCTCCACACCGATG
CGTTTCCGCTCCGCACGCGTTGCGTACGTGGGCGCCGCCCTTTGTGGCGC
TGCTGCCCTGCCACTGCCGGATTGAATCAGAGGCTGCTGACCGCCTGGCT
GCCAGGCTGAGACCTAGCAAAGACTGTCTCAGCTTGTCGCCCGCTGCGTC
AGACTTGCACCGCGTACGCTCGCGTAGACGTGTTTCCATATCCTCTTCTT
CAAGCAGCACATTGTAAATAAAAACTCTAACTTATCTGCCACAGCGGGCC
GTCGTGGTGTCCGCAAGTCACAAAACATCCAACATCGGCCTGGGAATACT
TGTACTGCATGCCCGTCTGTAGGTTTCCTGGGCCAGCATGTCACTCCACA
CATCGGCTGCCGATTGTACATAGCGGACATCCCGGGCCTTGCCACCTCGG
GCACCGTTGAGCTCACATCGGAGTCATGGAGACCAGGGACAGGGGCAGGG
CGTGTGGTGCCCACTCTGCCATCAGGACCGCATGCTTCCCGTGCAGCCTC
CCAACCAGGGTGGGGTGGAGGGTGCGGG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig11:2393211..2395288- >mRNA_S-ischiensis_contig11.2268.1 ID=mRNA_S-ischiensis_contig11.2268.1|Name=mRNA_S-ischiensis_contig11.2268.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1530bp|location=Sequence derived from alignment at S-ischiensis_contig11:2393211..2395288- (Schizocladia ischiensis KU_0333)
ATGGCTGAATCGTCGGGTAGGGCGGACCGCGCGCCGGATCTTCAGTCCCG
CGCCGCCCGAGTCTTGTTGCGGGACCGCGAACGGGGCCCCCAGCGACAGG
CACGTCGCACGGTTGGCGAGTCACGCCCCGACCAAGAGGACGCTACGCCG
GCCCGCCGGCGCCCCGGGGGGGCTGGAGGGAGTCCACTGGCATCCCCGTC
CCTCCAGCAAGCCCGAAAACGTCAACACAACAACCGTCCTTTGAGGAAGC
GGCAACCTCAACTACGCCTCCGAAACGGGCGATTCTCCTATCGCGTGAAT
TCGGGCAAGATGGCTGAATCGTCGGGTAGGGCGGACCGCGCGCCGGATCT
TCAGTCCCGCGCCGCCCGAGTCTTGTTGCGGGACCGCGAACGGGGCCCCC
AGCGACAGGCACGTCGCACGGTTGGCGAGTCACGCCCCGACCAAGAGGAC
GCTACGCCGGCCCGCCGGCGCCCCGGGGGGGCTGGAGGGAGTCCACTGGC
ATCCCCGTCCCTCCAGCAAGCCCGAAAACGTCAACACAACAACCGTCCTT
TGAGGAAGCGGCAACCTCAACTACGCCTCCGAAACGGGCGATTCTCCTAT
CGCGTGAATTCGGGCAAGGTGGTGAACCCAGGCGGGGTTGGAGCGGAGCA
TGGCGCGTGGCAGATGACCCAGGTATACGCATGGCTCCAGGCGGAGAAGT
TGGGGGTTCTCCGTTCCTTGAACCGGTGGTGAACCCAGGCGGGGTTGGAG
CGGAGCATGGCGCGTGGCAGATGACCCAGGTATACGCATGGCTCCAGGCG
GAGAAGTTGGGGGTTCTCCGTTCCTTGAACCGGCGCTTCCGCGGCATCAT
GGATGAGACTTCCATGTGGGTGGTGTGGGTAGAGCTGCTTAACACGTTGG
CTTCCAAGCTGGTGGTGGAGGTGCCGCGGAGCCTCCCCCCGGGGTGCAAT
CGAGGCAACCTGGAGCAGCTGGCCGGCGCTTCCGCGGCATCATGGATGAG
ACTTCCATGTGGGTGGTGTGGGTAGAGCTGCTTAACACGTTGGCTTCCAA
GCTGGTGGTGGAGGTGCCGCGGAGCCTCCCCCCGGGGTGCAATCGAGGCA
ACCTGGAGCAGCTGGCCGGTTTCCTGGGCCAGCATGTCACTCCACACATC
GGCTGCCGATTGTACATAGCGGACATCCCGGGCCTTGCCACCTCGGGCAC
CGTTGAGCTCACATCGGAGTCATGGAGACCAGGGACAGGGGCAGGGCGTG
TGGTGCCCACTCTGCCATCAGGACCGCATGCTTCCCGTGCAGCCTCCCAA
CCAGGGTGGGGTGGAGGGTGCGGGGTTTCCTGGGCCAGCATGTCACTCCA
CACATCGGCTGCCGATTGTACATAGCGGACATCCCGGGCCTTGCCACCTC
GGGCACCGTTGAGCTCACATCGGAGTCATGGAGACCAGGGACAGGGGCAG
GGCGTGTGGTGCCCACTCTGCCATCAGGACCGCATGCTTCCCGTGCAGCC
TCCCAACCAGGGTGGGGTGGAGGGTGCGGG back to top
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