mRNA_S-ischiensis_contig11.2263.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig11.2263.1
Unique NamemRNA_S-ischiensis_contig11.2263.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
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BLAST of mRNA_S-ischiensis_contig11.2263.1 vs. uniprot
Match: D8LBW9_ECTSI (Novel cap binding protein nCBP n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBW9_ECTSI)

HSP 1 Score: 283 bits (725), Expect = 8.500e-90
Identity = 131/189 (69.31%), Postives = 155/189 (82.01%), Query Frame = 1 
Query:   58 GVVSEELYDQDEDLTGTLQTPIQNRYCFWYYRKQPVKD--DPGESYEASIKEVASFQTVEHFWRIYNHLQRPGQVPTATDYHLFKDGIKPTWEDSQNLRGGQLMVRLRKGLASHYWEELVLAIIGEQFDVGNEICGAVVSIRYSEDVISLWNRNCDNSEALDKMREVLTRIFKLPGHVQMEYRRHQDNL 618
            G   E LY++ EDLTGT QT IQNRYCFWYYRK   K+  DP E+YE+ IK V SFQTVEHFWRIYNH+ R  QVP ATD HLF+DGIKPTWED+ N RGGQL++RL+KGLAS  WE LVLAIIGEQFDVGNEICGAVVS+RYSEDVIS+WNR+  N+E ++K+R+ + R+ ++P  VQ+EYRRHQDNL
Sbjct:   75 GPAYESLYNEPEDLTGTRQTLIQNRYCFWYYRKGAQKESKDPSEAYESGIKVVDSFQTVEHFWRIYNHILRADQVPNATDVHLFRDGIKPTWEDASNSRGGQLLIRLKKGLASRAWESLVLAIIGEQFDVGNEICGAVVSVRYSEDVISVWNRSASNTEGIEKIRDTVKRLLQIPSFVQVEYRRHQDNL 263
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BLAST of mRNA_S-ischiensis_contig11.2263.1 vs. uniprot
Match: A0A835Z354_9STRA (Putative eukaryotic initiation factor 4E n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z354_9STRA)

HSP 1 Score: 268 bits (686), Expect = 5.580e-88
Identity = 129/184 (70.11%), Postives = 148/184 (80.43%), Query Frame = 1 
Query:   76 LYDQDEDLTGTLQTPIQNRYCFWYYRKQPVKDDPGESYEASIKEVASFQTVEHFWRIYNHLQRPGQVPTATDYHLFKDGIKPTWEDSQNLRGGQLMVRLRKGLASHYWEELVLAIIGEQFDVGNEICGAVVSIRYSEDVISLWNRNCDNSEALDKMREVLTRIFKLPGHVQMEYRRHQDNLSTL 627
            LYD  ED TG  QT IQNRYCFWY +K   K    E YE+SIK++ASFQTVEHFWRIYNHLQRP QVP  TDYHLFKDGIKP WEDS N RGG  M+RL+KGLAS   +EL+LA+IGEQFDVGNEICGAV+S+RYSEDV+ +WNRN DN EA DK+R+ + RI KLP  VQ+EYRRHQD++S L
Sbjct:   11 LYDSPEDTTGGTQTAIQNRYCFWYKQKGN-KQLTTEDYESSIKQLASFQTVEHFWRIYNHLQRPDQVPIGTDYHLFKDGIKPAWEDSHNARGGLWMMRLKKGLASR--QELLLAMIGEQFDVGNEICGAVMSVRYSEDVVYVWNRNADNREAADKIRDQIRRILKLPNFVQLEYRRHQDSMSGL 191
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BLAST of mRNA_S-ischiensis_contig11.2263.1 vs. uniprot
Match: A0A7S2B9L2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B9L2_9STRA)

HSP 1 Score: 241 bits (616), Expect = 1.580e-76
Identity = 105/183 (57.38%), Postives = 144/183 (78.69%), Query Frame = 1 
Query:   73 ELYDQDEDLTGTLQTPIQNRYCFWYYRKQPVKDDPGESYEASIKEVASFQTVEHFWRIYNHLQRPGQVPTATDYHLFKDGIKPTWEDSQNLRGGQLMVRLRKGLASHYWEELVLAIIGEQFDVGNEICGAVVSIRYSEDVISLWNRNCDNSEALDKMREVLTRIFKLPGHVQMEYRRHQDNLS 621
            EL D+ EDL    QT IQNRY FW+ ++Q       ++++A+++++ASFQTV+HFWR+Y+H+QR   +P  TD+HLFKDGIKPTWED  N +GG+ ++RLRKGLA+ YWEEL+L I+GEQFDVGNE+CGAV+SIRY+ED+IS+WNRN DN+EA  K+R+ + R+ +LP  +  EY+RH D LS
Sbjct:   17 ELVDEPEDLE--KQTAIQNRYVFWFMQRQSKSAVGNDNFDANLQQIASFQTVQHFWRVYDHVQRATSLPQMTDFHLFKDGIKPTWEDPSNKQGGKWIIRLRKGLAARYWEELLLGIVGEQFDVGNEVCGAVLSIRYNEDIISIWNRNADNTEATSKIRDHMRRLLRLPAFISTEYKRHADALS 197
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BLAST of mRNA_S-ischiensis_contig11.2263.1 vs. uniprot
Match: A0A6G0XTE8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XTE8_9STRA)

HSP 1 Score: 241 bits (614), Expect = 9.940e-76
Identity = 107/171 (62.57%), Postives = 134/171 (78.36%), Query Frame = 1 
Query:  112 QTPIQNRYCFWYYRKQPVKD-DPGESYEASIKEVASFQTVEHFWRIYNHLQRPGQVPTATDYHLFKDGIKPTWEDSQNLRGGQLMVRLRKGLASHYWEELVLAIIGEQFDVGNEICGAVVSIRYSEDVISLWNRNCDNSEALDKMREVLTRIFKLPGHVQMEYRRHQDNLS 621
            + PIQN YCFWY +K   K  D  ESYE SIKE+  F+TV+ FWR+YNHL RP  +P  TDYHLFK GIKP WED+ N RGG+ M+R+RKG+AS YWE+LVLAIIGEQFDVGNEICGAV+SIRY+ED+ISLWNRN DN+EA  ++R+ + ++  LP  V +EY+RH  +L+
Sbjct:   19 EAPIQNTYCFWYMKKNSGKTLDDQESYEKSIKEIGEFRTVQGFWRVYNHLIRPNDLPNTTDYHLFKSGIKPMWEDAANRRGGKWMIRIRKGIASRYWEDLVLAIIGEQFDVGNEICGAVMSIRYNEDIISLWNRNADNNEACYRIRDTMRKLLNLPQFVSLEYKRHDTSLN 189
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BLAST of mRNA_S-ischiensis_contig11.2263.1 vs. uniprot
Match: D0MYJ6_PHYIT (Eukaryotic initiation factor 4E, putative n=11 Tax=Phytophthora TaxID=4783 RepID=D0MYJ6_PHYIT)

HSP 1 Score: 239 bits (609), Expect = 1.160e-75
Identity = 107/173 (61.85%), Postives = 132/173 (76.30%), Query Frame = 1 
Query:  103 GTLQTPIQNRYCFWYYRKQPVKDDPGESYEASIKEVASFQTVEHFWRIYNHLQRPGQVPTATDYHLFKDGIKPTWEDSQNLRGGQLMVRLRKGLASHYWEELVLAIIGEQFDVGNEICGAVVSIRYSEDVISLWNRNCDNSEALDKMREVLTRIFKLPGHVQMEYRRHQDNLS 621
            GT +TPIQN Y FWY ++        ESYE SIK +  F+TV+ FW+IYNHL RP  +P   DYHLFK GIKP WEDS N RGG+ MVRLRKG+AS YWE+LVLAIIGEQFDVGNEICGAV+SIRY+ED+ISLWNRN DN+EA  ++R+ + ++  LP  V +EY+RH  +L+
Sbjct:   18 GTTETPIQNMYTFWYIKRSTGNKAVSESYEKSIKGLGDFKTVQDFWKIYNHLVRPNDLPNTMDYHLFKTGIKPMWEDSANRRGGKWMVRLRKGIASRYWEDLVLAIIGEQFDVGNEICGAVISIRYNEDIISLWNRNADNNEACYRIRDTMRKVLNLPQFVALEYKRHDTSLN 190
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BLAST of mRNA_S-ischiensis_contig11.2263.1 vs. uniprot
Match: F0W0Q3_9STRA (Eukaryotic initiation factor 4E putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W0Q3_9STRA)

HSP 1 Score: 238 bits (608), Expect = 2.640e-75
Identity = 107/183 (58.47%), Postives = 136/183 (74.32%), Query Frame = 1 
Query:   73 ELYDQDEDLTGTLQTPIQNRYCFWYYRKQPVKDDPGESYEASIKEVASFQTVEHFWRIYNHLQRPGQVPTATDYHLFKDGIKPTWEDSQNLRGGQLMVRLRKGLASHYWEELVLAIIGEQFDVGNEICGAVVSIRYSEDVISLWNRNCDNSEALDKMREVLTRIFKLPGHVQMEYRRHQDNLS 621
            ++ + D+D TG    PIQN Y FWY ++     +  ESYE SIKE+  F+TV+ FW IYNHL RP  +P   DYHLFK GIKP WED  N RGG+ MVR+RKG+AS YWE+L+LAIIGEQFDVGNEICGAV+SIRY+ED+ISLWNRN DN+EA  ++R+ + R+  LP  V +EY+RH  +L+
Sbjct:   10 DISEADDDTTGKSDAPIQNMYTFWYMKRNTA--NKAESYEKSIKELGDFKTVQGFWCIYNHLVRPNDLPNTMDYHLFKTGIKPMWEDPSNRRGGKWMVRMRKGIASRYWEDLILAIIGEQFDVGNEICGAVISIRYNEDIISLWNRNADNNEACYRIRDTMRRVLNLPQFVALEYKRHDASLN 190
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BLAST of mRNA_S-ischiensis_contig11.2263.1 vs. uniprot
Match: A0A024TVS7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TVS7_9STRA)

HSP 1 Score: 238 bits (606), Expect = 7.240e-75
Identity = 109/177 (61.58%), Postives = 137/177 (77.40%), Query Frame = 1 
Query:   94 DLTGTLQTPIQNRYCFWYYRKQPVKD-DPGESYEASIKEVASFQTVEHFWRIYNHLQRPGQVPTATDYHLFKDGIKPTWEDSQNLRGGQLMVRLRKGLASHYWEELVLAIIGEQFDVGNEICGAVVSIRYSEDVISLWNRNCDNSEALDKMREVLTRIFKLPGHVQMEYRRHQDNLS 621
            D TG  ++PIQN Y FWY +K   K  +  ESYE SIKE+A F+TV+ FWR+YNHL RP  +P  TDYHLFK GIKP WEDS N RGG+ M+R+RKG+AS YWE+LVLAIIGEQFDVGNEICGAV+SIRY+ED+ISLWNRN DN+EA  ++R+ + ++  LP    +EY+RH  +L+
Sbjct:   12 DATG--ESPIQNTYTFWYMKKNSGKALEDQESYEKSIKEIAEFRTVQGFWRVYNHLIRPNDLPNTTDYHLFKAGIKPMWEDSANRRGGKWMIRIRKGIASRYWEDLVLAIIGEQFDVGNEICGAVMSIRYNEDIISLWNRNADNNEACYRIRDTMRKVLNLPQFASLEYKRHDTSLN 186
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BLAST of mRNA_S-ischiensis_contig11.2263.1 vs. uniprot
Match: G4YG94_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YG94_PHYSP)

HSP 1 Score: 235 bits (600), Expect = 2.290e-74
Identity = 105/173 (60.69%), Postives = 131/173 (75.72%), Query Frame = 1 
Query:  103 GTLQTPIQNRYCFWYYRKQPVKDDPGESYEASIKEVASFQTVEHFWRIYNHLQRPGQVPTATDYHLFKDGIKPTWEDSQNLRGGQLMVRLRKGLASHYWEELVLAIIGEQFDVGNEICGAVVSIRYSEDVISLWNRNCDNSEALDKMREVLTRIFKLPGHVQMEYRRHQDNLS 621
            G+ +TPIQN Y FWY ++        ESYE SIK +  F+TV+ FW+IYNHL RP  +P   DYHLFK GIKP WED  N RGG+ MVRLRKG+AS YWE+LVLAIIGEQFDVGNEICGAV+SIRY+ED+ISLWNRN DN+EA  ++R+ + ++  LP  V +EY+RH  +L+
Sbjct:   12 GSAETPIQNMYSFWYIKRSTGNKAVSESYEKSIKGLGDFKTVQDFWKIYNHLVRPNDLPNTMDYHLFKTGIKPMWEDPANRRGGKWMVRLRKGIASRYWEDLVLAIIGEQFDVGNEICGAVISIRYNEDIISLWNRNADNNEACYRIRDTMRKVLNLPQFVALEYKRHDTSLN 184
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BLAST of mRNA_S-ischiensis_contig11.2263.1 vs. uniprot
Match: A0A485LDV3_9STRA (Aste57867_20004 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LDV3_9STRA)

HSP 1 Score: 237 bits (605), Expect = 2.640e-74
Identity = 105/170 (61.76%), Postives = 134/170 (78.82%), Query Frame = 1 
Query:  112 QTPIQNRYCFWYYRKQPVKDDPGESYEASIKEVASFQTVEHFWRIYNHLQRPGQVPTATDYHLFKDGIKPTWEDSQNLRGGQLMVRLRKGLASHYWEELVLAIIGEQFDVGNEICGAVVSIRYSEDVISLWNRNCDNSEALDKMREVLTRIFKLPGHVQMEYRRHQDNLS 621
            ++PIQN YCFWY +K   K    ESYE SIKE+  F+TV+ FWR+YNHL RP  +P  TDYHLFK GIKP WED+ N RGG+ M+R+RKG+AS YWE+LVLAI+GEQFDVGNEICGAV+SIRY+ED+ISLWNRN DN+EA  ++R+ + ++  LP  V +EY+RH  +L+
Sbjct:   19 ESPIQNTYCFWYMKKNSGKT---ESYEKSIKELGEFRTVQGFWRVYNHLIRPNDLPNTTDYHLFKAGIKPMWEDAANRRGGKWMIRIRKGIASRYWEDLVLAIVGEQFDVGNEICGAVMSIRYNEDIISLWNRNADNNEACYRIRDTMRKLLNLPQFVSLEYKRHDTSLN 185
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BLAST of mRNA_S-ischiensis_contig11.2263.1 vs. uniprot
Match: W4FZB5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FZB5_9STRA)

HSP 1 Score: 235 bits (600), Expect = 8.200e-74
Identity = 105/171 (61.40%), Postives = 134/171 (78.36%), Query Frame = 1 
Query:  112 QTPIQNRYCFWYYRKQPVKD-DPGESYEASIKEVASFQTVEHFWRIYNHLQRPGQVPTATDYHLFKDGIKPTWEDSQNLRGGQLMVRLRKGLASHYWEELVLAIIGEQFDVGNEICGAVVSIRYSEDVISLWNRNCDNSEALDKMREVLTRIFKLPGHVQMEYRRHQDNLS 621
            + PIQN Y FWY +K   K  +  ESYE SIKE++ F+TV+ FWR+YNHL RP  +P  TDYHLFK GIKP WED+ N RGG+ M+R+RKG+AS YWE+LVLAI+GEQFDVGNEICGAV+SIRY+ED+ISLWNRN DNSEA  ++R+ + ++  LP  V +EY+RH  +L+
Sbjct:   17 EVPIQNTYTFWYMKKNSGKALEDQESYEKSIKEISEFRTVQGFWRVYNHLIRPNDLPNTTDYHLFKAGIKPMWEDTANRRGGKWMIRIRKGIASRYWEDLVLAIVGEQFDVGNEICGAVMSIRYNEDIISLWNRNADNSEACYRIRDTMRKLLNLPQFVSLEYKRHDTSLN 187
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2263.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBW9_ECTSI8.500e-9069.31Novel cap binding protein nCBP n=2 Tax=Ectocarpus ... [more]
A0A835Z354_9STRA5.580e-8870.11Putative eukaryotic initiation factor 4E n=1 Tax=T... [more]
A0A7S2B9L2_9STRA1.580e-7657.38Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A6G0XTE8_9STRA9.940e-7662.57Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
D0MYJ6_PHYIT1.160e-7561.85Eukaryotic initiation factor 4E, putative n=11 Tax... [more]
F0W0Q3_9STRA2.640e-7558.47Eukaryotic initiation factor 4E putative n=1 Tax=A... [more]
A0A024TVS7_9STRA7.240e-7561.58Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
G4YG94_PHYSP2.290e-7460.69Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A485LDV3_9STRA2.640e-7461.76Aste57867_20004 protein n=1 Tax=Aphanomyces stella... [more]
W4FZB5_9STRA8.200e-7461.40Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig11contigS-ischiensis_contig11:2363731..2369208 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score284.3
Seed ortholog evalue5.3e-74
Seed eggNOG ortholog2880.D8LBW9
Preferred nameEIF4E2
KEGG koko:K03259
KEGG Pathwayko01521,ko03013,ko04066,ko04150,ko04151,ko04211,ko04910,map01521,map03013,map04066,map04150,map04151,map04211,map04910
KEGG ModuleM00428
GOsGO:0000339,GO:0000340,GO:0001701,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005845,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0007275,GO:0007553,GO:0007554,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009790,GO:0009792,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010565,GO:0010566,GO:0010605,GO:0010608,GO:0010629,GO:0010817,GO:0010893,GO:0017148,GO:0019216,GO:0019218,GO:0019222,GO:0019538,GO:0019899,GO:0030371,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031625,GO:0032268,GO:0032269,GO:0032350,GO:0032352,GO:0032501,GO:0032502,GO:0032991,GO:0034248,GO:0034249,GO:0034518,GO:0034641,GO:0034645,GO:0043009,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044389,GO:0044424,GO:0044444,GO:0044464,GO:0045182,GO:0045834,GO:0045940,GO:0045966,GO:0045998,GO:0046885,GO:0046886,GO:0046889,GO:0046890,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048580,GO:0048582,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050810,GO:0051094,GO:0051171,GO:0051172,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0060255,GO:0062012,GO:0062013,GO:0065007,GO:0065008,GO:0071704,GO:0080090,GO:0090030,GO:0090031,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000026,GO:2000112,GO:2000113
EggNOG free text desc.translation initiation factor activity
EggNOG OGsCOG5053@1,KOG1669@2759
Ec32 ortholog descriptionnovel cap binding protein nCBP
Ec32 orthologEc-20_003570.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03012,ko03019
Hectar predicted targeting categoryother localisation
Exons6
Model size711
Cds size708
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig11.2263.1prot_S-ischiensis_contig11.2263.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig11 2363732..2369208 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815610.7032568-CDS-S-ischiensis_contig11:2363731..23638511622815610.7032568-CDS-S-ischiensis_contig11:2363731..2363851Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 2363732..2363851 -
1695739802.3724763-CDS-S-ischiensis_contig11:2363731..23638511695739802.3724763-CDS-S-ischiensis_contig11:2363731..2363851Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 2363732..2363851 -
1622815610.7152152-CDS-S-ischiensis_contig11:2364454..23645601622815610.7152152-CDS-S-ischiensis_contig11:2364454..2364560Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 2364455..2364560 -
1695739802.385208-CDS-S-ischiensis_contig11:2364454..23645601695739802.385208-CDS-S-ischiensis_contig11:2364454..2364560Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 2364455..2364560 -
1622815610.727075-CDS-S-ischiensis_contig11:2366218..23663551622815610.727075-CDS-S-ischiensis_contig11:2366218..2366355Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 2366219..2366355 -
1695739802.397637-CDS-S-ischiensis_contig11:2366218..23663551695739802.397637-CDS-S-ischiensis_contig11:2366218..2366355Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 2366219..2366355 -
1622815610.7379844-CDS-S-ischiensis_contig11:2366651..23667231622815610.7379844-CDS-S-ischiensis_contig11:2366651..2366723Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 2366652..2366723 -
1695739802.4064507-CDS-S-ischiensis_contig11:2366651..23667231695739802.4064507-CDS-S-ischiensis_contig11:2366651..2366723Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 2366652..2366723 -
1622815610.7494154-CDS-S-ischiensis_contig11:2367505..23676471622815610.7494154-CDS-S-ischiensis_contig11:2367505..2367647Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 2367506..2367647 -
1695739802.4147458-CDS-S-ischiensis_contig11:2367505..23676471695739802.4147458-CDS-S-ischiensis_contig11:2367505..2367647Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 2367506..2367647 -
1622815610.7594297-CDS-S-ischiensis_contig11:2369077..23692081622815610.7594297-CDS-S-ischiensis_contig11:2369077..2369208Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 2369078..2369208 -
1695739802.4226635-CDS-S-ischiensis_contig11:2369077..23692081695739802.4226635-CDS-S-ischiensis_contig11:2369077..2369208Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 2369078..2369208 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig11.2263.1

>prot_S-ischiensis_contig11.2263.1 ID=prot_S-ischiensis_contig11.2263.1|Name=mRNA_S-ischiensis_contig11.2263.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=236bp
PGEAASLQEAPPPPQGATEGVVSEELYDQDEDLTGTLQTPIQNRYCFWYY
RKQPVKDDPGESYEASIKEVASFQTVEHFWRIYNHLQRPGQVPTATDYHL
FKDGIKPTWEDSQNLRGGQLMVRLRKGLASHYWEELVLAIIGEQFDVGNE
ICGAVVSIRYSEDVISLWNRNCDNSEALDKMREVLTRIFKLPGHVQMEYR
RHQDNLSTLHTPGGGGGGGTAALEGTGTPGSAAGAS
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mRNA from alignment at S-ischiensis_contig11:2363731..2369208-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig11.2263.1 ID=mRNA_S-ischiensis_contig11.2263.1|Name=mRNA_S-ischiensis_contig11.2263.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=5478bp|location=Sequence derived from alignment at S-ischiensis_contig11:2363731..2369208- (Schizocladia ischiensis KU_0333)
CCGGGCGAGGCCGCCTCCCTCCAGGAGGCGCCCCCTCCCCCTCAGGGGGC
GACGGAAGGCGTTGTGTCGGAGGAGCTGTACGACCAGGACGAGGACCTTA
CAGGGACTCTGCAGACCCCAATCCAGAACAGGTAAGCAAGATATAGCTGT
GCGGCCGGCCGGGCCACGCCAATGTTGCGTGTGTCACAGCGCGCCGACGC
CGTGGCGCACCGGCTGCCGCGCCCTTGGCACTGGCTCTCGTCTTGTCTTG
CAACTGTGTTTGTTCGGCGCGCGGCGGGCCTGTTATTTGGGACCGCCGGG
GTGTGTTTTTCTGGCCCCGTGCTGCTGTTTTCCCCGTCGATGGTGATGCT
GTTTGCATGGCCGTCCCCATGCCGCCTGCACTAAATAGCTTACTCGGTGC
GTGCATGAGTAGCGCTCGACAGCCGGGACAGGCCGGCTACGCGAGGTTTT
TTTTTTACGACCTCGGTCAATTGACTGTACGGTTTTCATATTTATACATG
GGATATCTGGACAATGTGGGGATCGACATGGGCACTGGGGGAGCGGGGGG
ATCAGAGACGCCTTTGTTGATTGATAAGGCCCGGCGGCTACTTGCTAGCA
CACGAGACCGCCACCCCCCCTTCTTGTGGAACCCTTGGGCATGCTCATGC
CGCGGGTGTGCTGTATCACTAATGTGTACTACTGCCCAATACTGTTGCTG
CTACTGCTGCTTCAACTACTGCAGCTGCCACTCGTGCTGAGCACTGCTTC
GAAGTACAGTATATGTATGCACTCACGTGGTGCTTGCCGTAGTCCCGAGA
CCATTGACCCGCACCTCGTGCGAGGCGGAGCAGGACCCCTCCCTCCCCTG
GCAGAGCCAAGGTGGGAGGGGGTGGCCACCGAAGTACAGTACAGTATATA
TATAGAGAGAGAGCGATGCGAGTACTCGTACTCACGTTGTGCTTGCCCTA
GTCCCGAGACCATTGACCACACGCTTGACAACTGTACTGTACTACCAGTA
CTCCTACTCGAGTAATACAATACAGTACAACTATGCGCTACTGTACTAAT
ATATGCTGCTCGTGCTACTACATATTGCAAGGTAGAATTTCAACATTTTG
TTTTTTTGTACTGCAAGCGCAATGTGAGGACACACGCTTTTTCAAAGGTG
CAGTACAAGCATGTTATTATACACACGTACTCGTACTCACGTCGCGCTTC
TGTAGCCGCAATAGTAGAAACGGCTAACTTACACGCCCTGAAATGGGACT
ACTCTGCATACACATCGATCCGGTTGTCCCCGTCGTTTCCCCCTGAGACG
CCCTCGCTTCCCCCGCCCCGCCATGCCGCCGCCGCTGCGGCGGGACCCAG
ATACGAAGTACTACAGTACACTCAATTCTGAAATGGGACAACTACTAATA
CGAGAACACTCATCTCACACACGTGCGATTGTACCTCGTTACGATTTATA
TGAATAACCATGCATGGTATCTTAAACGGGACAACTACTACAGTAGTACG
AGAACACTCAATCTCACACATGTGCTATTGTACCTCGTTACAATTGACGT
GAATCGCCCAGGTATTGCTTCTGGTACTACCGCAAGCAGCCTGTCAAGGA
TGATCCCGGGGAGTCTTACGAGGCGAGCATCAAGGAGGTTGCCAGCTTCC
AGACGGTGGAGCACTTCTGGCGGATATACAACCACCTGCAGCGCCCTGGC
CAGGCGAGACTCTTGTGTGTGTGTGTGTGTGTCTGTGTGCGTGTGTGTGT
GTGTGTGTGTGTGCGTGCGCATGTGCGTTTGTGCGAGCATATAAGTGCAT
GTGTGCCCATATACAACCACCTGCAGCGCCCTGACCAGGCGAGACTCGAG
TGTGTGTGTGTGTGTGTGTGTGCGAGCGCTTGTTGTGCCGTTGTTCTTGT
TGTTGTCTGTCTTTGTTTCTTGAGAGAGTGTGTGTTTGCGCGCGAGTGTG
TGTGGTGTGCGCTCCGTTGTTGTCACTCCCCCGGGCTGGGAGCACACGGG
CCACCACGCACCTGGAGTTCCCGCATCCCCACCCAAACAATGACACCAAA
GGAGATCGAGCTGAGCCGCTGACTCTCTTGGGGTTCATACAGCATCCACG
TGTATATATATATATATATGTACTCACGTTGTGCTGTACTCACATTGTGC
TTGCCGTAGTCCCGAGACCATTGACTACGCGCCTCGGTCGGACGTATATA
TATATACATATATATATACTACGTTTTTATGTACTCGCGTTGTGCTTGCC
GTAGTCCCGAGACCATTGACCATGCAAGGTATTTAGCAACAACCACAATG
CACTCCTCTCCTTTGCCGCCCCCCTTCTCCCTAGCCTGCCTCCCTCTCAT
CCCCCAACCCGCCCGTCCCCCCGACCCCCCCCCCCTGGCGCCAACGCCCC
GTTCTACTTGCCCTTGCCTCCCGCCCCCTTTCCCCTTCCGCTCGCCTGGA
CCTTTCTCCATAACTTAACTGTGTTTTTGGTACAGGTGCCCACGGCCACA
GACTACCACCTGTTCAAGGACGGCATCAAGCCCACGTGGGAGGACAGCCA
GAACCTGGCAAGTGGAGTACTTGGAAGTACTTGATAATTGTACTCGAGTA
CGAGTACTACAGTAGTGTACAAGAGGGACACCCTTACGGAACCGTGACAG
GGAATGCCACAAGGACAGTGTCCTCAACGGTCTCGGGGCAAAAGCAAGCA
CAGCATGAGTACGAGTACACACACACACATATATACACACATACTTCCAC
CTATGCCGCAACTAGTTCAGGTGTGCCTGCGTGGTCCAAGACTTTAAAGC
AATGTAGCCTCAAAAAGGTTGGCGTGCGCCTCGCCCCCGTCTATGTGTAA
CAGAGGGGGGGGCAGCTGATGGTGCGCCTGCGCAAGGGCTTGGCGAGCCA
TTACTGGGAGGAGCTGGTCCTTGCCATCATCGGGGAGCAGTTTGACGTGG
GCAATGAGATATGCGGCGCTGTGGTGTCGATCCGCTACAGGTGAGTTGGT
TGGTGTTGGGTGCCAAATATGCAGTATCTGCTCCGTCTCGACCGAGGCGC
GTCGTAAATGGTCACGGGACCACGGCAAGCACAGATGTGAGTACATACAT
ACTTCCAAGTATATATCAAGCACCAGGCACATGGTGGAGCGTAAGCGTTA
CGTTGCGGGCGCGTGTGTGTGGAAGGCCGAGCGGCCCCTCTGGGGTTTAT
TGTGAAGGGCAAGGCGTACTCGAGTGCTTCGAAGTTCTTCGAAGTACGAG
TTTGACTGGAAACCCTTTTGCACCCGGTTCAGTTGACCGGTTTACCAACC
AGTTTGCTCGATAGCTCCTATTGTGGTATGTGAGAGGAGGGTGAGACAGT
ACCACACACTATGCCTGAGTGCCCCCACTGGAAAGCAGTTTGCATGGCGT
CTGGATCCCTCAGGTGAGCCTGCGCTGTGGCCCGAGGAAACCCAGAGTAA
GGTATAGTCTGCGCTTCAAGATTTTCTTGTGTCTGTGTGGTGTTCGTGGT
TAGACCGAGTAGATAGGGTAGATGGTGACCTTGGATATCCCCCCTCCATG
CCCCTGCATGGCGGGGGACCCCCCTCCTCTGCTGAACTCGGTCCAGCAGG
GGAGCCCCCCCCCCCGCCCTGACTCTCACGAGTCAGGAGCGGGGCCCGCC
ATGCGCGGGGGGATGGTCCCTCCCTCCCACCCCGGCTTGCCAGGGACGGG
AGGGAGATTGCTCCGTCGTCAACGGCGCGTGGTCAAATGGTCTCGGGACT
ACGGCAATCACAACGCGAATACATATATATACTATAGTAGTAGTTTTCAG
AACTTGGGCAATACGGTATTGTTGCCATGCAATGGCTACCTGATACGACG
GCCAAACATCACGATTTTGAAGGAGAAAAAACAGGCAAAGCCTTCGTGGG
TAACCGGTTAAACCAGCTAGCTGAAACCGGCCGGTACAATAGTTCACAAC
CCTATCAAGCATCCGCCGGGCGGACTACTTTGCCGTCTCTTTCTGTTTTG
ATAGTGTATCTCCATGCCTGGTTGAAGGGAGCTCTCGTGCGAGCAAAAAC
GTCGCCGGCTTCTTCTCCAAGTACCGCGGAAGCACCACATACATAGTTAC
ATGTACTCGAGTGCCACTGTAGTATGGGGGAGGGGTGGCGCAGGGTTGGA
CAGGGCCTGCTCTCGCTCTCTCTCTCTCTCTCAGTCGAGGCGTACGCTCA
AACGTCTCGAGACAATCAATGCACGGCCAGTTTGTCACGTGGTGAGTACT
GTACGGTGCCTACAAATAGCTACGCGCACACGTACAGTGTTTCGTGTTCG
AAGATGCGTGTATACTTCCACGTACATGTCATGAGAGAGGCAACCAATAC
CTACTCATACTTCGTACACATACTCGAGTACAGTATTTCGTGCTCGAGGA
TGCGTGCAACTGTATACTTCCACGTACATACATGAGAGAGGCGACCAATT
CCTACTCATACACGTACTCGAGTACAGTACTTCGTGCTCGAGGATGCGTG
TAACCGTACACTTCCAAGTACATACATATCATGTGGAGACTACAATAGAG
AATGGAGGATGACCCCGTGGCATCTGACGCCCCGTCGTCGCTGCAACGCC
GCGCTCCGCCGGCCGTCCCGTCGCCGCCGGCGCTCACTGGGGCGGCAGCG
AGGACGTGATATCCCTGTGGAACCGCAACTGTGACAACAGCGAGGCTCTG
GACAAGATGCGGGAGGTGCTCACCCGCATATTCAAGCTGCCCGGCCATGT
GCAGGTATTGTGCTTGGAAGTACTGTACGACGCAGGTACTGTAGTGCAGT
ACAAGTACTGCGAAGCACATGTGCACGGAGTGTACGTGGTAGCGTAATCG
TCCAAGAGATCTTGCACTCCCATGCTAAACTTCGCGAGGGCATTTCTTGC
CGAGTACTGGTCGGATTCGCCCAGGAACATTCGGAAAGTCTCCCTCACGA
CCTGGCGGAACCTTTCCGAGATCTTTCGGGACACTTCAGGACCTTCCCGG
CTAGGAATATTCCCCCTAAAACCCGTGAGGGCAACATCTCTCCGACGATT
GCGGTACTCACGGTGTGCTTGCAGCATCAAGACCATGGACCGCCATATGT
AGCGCCTCGGCCAAGACGGAGCCCTCCGCCCTGGAAGTGTGTCTCACATA
AAAACGTGAGGGAGTGAAGTGATGGCACAGTACAGTACCACTACACTCGC
TAGCACTACTCTGACTGTACGTGTGCTCGAGTACAGTACTTGTGACTCCT
CGCCAAACTCGTACTCGAGTAGAGTGCTCATGGGATCATTGCAAGCACAC
CCACCTTGGCCAGGAACAACAATCTCTCTGCTCGCTACGACTTGCCATGC
CCTTCAGATGGAGTACCGGCGCCACCAAGACAACCTGAGCACTCTCCACA
CCCCAGGGGGGGGCGGCGGCGGCGGCACAGCCGCCCTCGAGGGCACCGGG
ACCCCGGGCAGCGCTGCGGGCGCCTCCC
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Coding sequence (CDS) from alignment at S-ischiensis_contig11:2363731..2369208-

>mRNA_S-ischiensis_contig11.2263.1 ID=mRNA_S-ischiensis_contig11.2263.1|Name=mRNA_S-ischiensis_contig11.2263.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1416bp|location=Sequence derived from alignment at S-ischiensis_contig11:2363731..2369208- (Schizocladia ischiensis KU_0333)
CCGGGCGAGGCCGCCTCCCTCCAGGAGGCGCCCCCTCCCCCTCAGGGGGC
GACGGAAGGCGTTGTGTCGGAGGAGCTGTACGACCAGGACGAGGACCTTA
CAGGGACTCTGCAGACCCCAATCCAGAACAGCCGGGCGAGGCCGCCTCCC
TCCAGGAGGCGCCCCCTCCCCCTCAGGGGGCGACGGAAGGCGTTGTGTCG
GAGGAGCTGTACGACCAGGACGAGGACCTTACAGGGACTCTGCAGACCCC
AATCCAGAACAGGTATTGCTTCTGGTACTACCGCAAGCAGCCTGTCAAGG
ATGATCCCGGGGAGTCTTACGAGGCGAGCATCAAGGAGGTTGCCAGCTTC
CAGACGGTGGAGCACTTCTGGCGGATATACAACCACCTGCAGCGCCCTGG
CCAGGTATTGCTTCTGGTACTACCGCAAGCAGCCTGTCAAGGATGATCCC
GGGGAGTCTTACGAGGCGAGCATCAAGGAGGTTGCCAGCTTCCAGACGGT
GGAGCACTTCTGGCGGATATACAACCACCTGCAGCGCCCTGGCCAGGTGC
CCACGGCCACAGACTACCACCTGTTCAAGGACGGCATCAAGCCCACGTGG
GAGGACAGCCAGAACCTGGTGCCCACGGCCACAGACTACCACCTGTTCAA
GGACGGCATCAAGCCCACGTGGGAGGACAGCCAGAACCTGAGGGGGGGGC
AGCTGATGGTGCGCCTGCGCAAGGGCTTGGCGAGCCATTACTGGGAGGAG
CTGGTCCTTGCCATCATCGGGGAGCAGTTTGACGTGGGCAATGAGATATG
CGGCGCTGTGGTGTCGATCCGCTACAGAGGGGGGGGCAGCTGATGGTGCG
CCTGCGCAAGGGCTTGGCGAGCCATTACTGGGAGGAGCTGGTCCTTGCCA
TCATCGGGGAGCAGTTTGACGTGGGCAATGAGATATGCGGCGCTGTGGTG
TCGATCCGCTACAGCGAGGACGTGATATCCCTGTGGAACCGCAACTGTGA
CAACAGCGAGGCTCTGGACAAGATGCGGGAGGTGCTCACCCGCATATTCA
AGCTGCCCGGCCATGTGCAGCGAGGACGTGATATCCCTGTGGAACCGCAA
CTGTGACAACAGCGAGGCTCTGGACAAGATGCGGGAGGTGCTCACCCGCA
TATTCAAGCTGCCCGGCCATGTGCAGATGGAGTACCGGCGCCACCAAGAC
AACCTGAGCACTCTCCACACCCCAGGGGGGGGCGGCGGCGGCGGCACAGC
CGCCCTCGAGGGCACCGGGACCCCGGGCAGCGCTGCGGGCGCCTCCATGG
AGTACCGGCGCCACCAAGACAACCTGAGCACTCTCCACACCCCAGGGGGG
GGCGGCGGCGGCGGCACAGCCGCCCTCGAGGGCACCGGGACCCCGGGCAG
CGCTGCGGGCGCCTCC
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