mRNA_S-ischiensis_contig11.2255.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig11.2255.1 vs. uniprot
Match: A0A6H5KPX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPX6_9PHAE) HSP 1 Score: 196 bits (497), Expect = 4.300e-60 Identity = 118/182 (64.84%), Postives = 139/182 (76.37%), Query Frame = 1
Query: 16 DDVGRRKKDDDH-AGKAGDNGGAGFSWGR---LRISGVLNLAADALHNLTDGLAIGAAFAAGGSRLGVGTMLATLLHELPHEIGDYTVLVQSGFTKWQAIGAQFCTAIAAFAGAALGLVATGCEGMEQVLLAFTAGGFLYVAG-SLIPEILDGPPPTALRAAGEMGAMATGVALMAGVALLE 546
DDV RRKKDDDH + K+G A G L++SGVLNLAADALHNL+DG+AIGA+FA+G S LG T LATLLHELPHEIGD+ VLVQSG TKWQAIGAQF TAIAAF G A+GL+AT GMEQ LLA T GGF+YV+ ++PEIL+ P+ L+ E+GAM+ G+ALMA VALLE
Sbjct: 51 DDVSRRKKDDDHVSNKSGSELSASPPPGEESGLKVSGVLNLAADALHNLSDGIAIGASFASG-SGLGFSTALATLLHELPHEIGDFAVLVQSGCTKWQAIGAQFATAIAAFLGTAIGLLATRYAGMEQPLLAVTGGGFVYVSCVGVMPEILNSGNPSFLQGVAEIGAMSAGIALMAIVALLE 231
BLAST of mRNA_S-ischiensis_contig11.2255.1 vs. uniprot
Match: A0A7S3GR45_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GR45_9STRA) HSP 1 Score: 134 bits (336), Expect = 8.700e-37 Identity = 78/150 (52.00%), Postives = 104/150 (69.33%), Query Frame = 1
Query: 100 LRISGVLNLAADALHNLTDGLAIGAAFAAGGSRLGVGTMLATLLHELPHEIGDYTVLVQSGFTKWQAIGAQFCTAIAAFAGAALGLVATGCEGMEQVLLAFTAGGFLYVAG-SLIPEILDGPPPTALRAAGEMGAMATGVALMAGVALLE 546
L+ SG LNL AD++HN TDG+AIGA+FA+G L T L+ + HE+PHEIGD+ +L+QSG TK QAI AQF TAIAA G ++GL+A E E++LL+FTAGGF+Y+AG +++P I+ T L+ EMG GV +M V LE
Sbjct: 4 LKASGWLNLIADSMHNFTDGIAIGASFASGHG-LAYATFLSVIFHEIPHEIGDFAILIQSGLTKSQAIKAQFVTAIAAVLGVSVGLLARRSEVAEELLLSFTAGGFVYLAGVNMLPGIVRTKSST-LQTVLEMGCFVLGVGMMVMVTFLE 151
BLAST of mRNA_S-ischiensis_contig11.2255.1 vs. uniprot
Match: W7TT21_9STRA (Zinc transporter n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TT21_9STRA) HSP 1 Score: 140 bits (354), Expect = 2.770e-36 Identity = 82/150 (54.67%), Postives = 107/150 (71.33%), Query Frame = 1
Query: 100 LRISGVLNLAADALHNLTDGLAIGAAFAAGGSRLGVGTMLATLLHELPHEIGDYTVLVQSGFTKWQAIGAQFCTAIAAFAGAALGLVATGCEGMEQVLLAFTAGGFLYVAG-SLIPEILDGPPPTALRAAGEMGAMATGVALMAGVALLE 546
L+ SG LN+ D LHNLTDG+AIGA+FA+G +GV T ++ LHE+PHEIGD+ +LVQSG + A QFCTA+AAF G LGLVA EG+E+++LA T GGFLYVA S++PE+L G P A ++ E+G + G+ LMA VAL E
Sbjct: 329 LKSSGYLNVVIDVLHNLTDGVAIGASFASGHG-VGVATTISVFLHEIPHEIGDFAILVQSGLSVQSAFLLQFCTAVAAFIGTLLGLVAKRQEGLERLVLALTTGGFLYVATVSVLPELLAGKPGGA-QSLREVGGVVGGIGLMAWVALGE 476
BLAST of mRNA_S-ischiensis_contig11.2255.1 vs. uniprot
Match: A0A7S2CHD3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CHD3_9STRA) HSP 1 Score: 135 bits (339), Expect = 1.560e-35 Identity = 85/177 (48.02%), Postives = 111/177 (62.71%), Query Frame = 1
Query: 19 DVGRRKKDDDHAGKAGDNGGAGFSWGRLRISGVLNLAADALHNLTDGLAIGAAFAAGGSRLGVGTMLATLLHELPHEIGDYTVLVQSGFTKWQAIGAQFCTAIAAFAGAALGLVATGCEGMEQVLLAFTAGGFLYVAG-SLIPEILDGPPPTALRAAGEMGAMATGVALMAGVALLE 546
D +KKDDD + GF RL G LNLAAD+LHN TDG+AIGA+F GG +G+ T L+ L+HELPHEIGD+ +L+Q+G QAIG QFCTA AFAG ALGL + + M + LLA +GGF+YVA +++PE+ G + E+ A + GV +M VA LE
Sbjct: 133 DGSAKKKDDDKKDEK------GF---RLDAGGYLNLAADSLHNFTDGIAIGASFV-GGKNMGIATTLSVLVHELPHEIGDFAILIQNGAKPAQAIGLQFCTAFFAFAGTALGLTSANYDNMSEFLLALVSGGFVYVATMTVLPELQVGKSSLG-QIFLEVSAFSAGVGMMVIVAALE 298
BLAST of mRNA_S-ischiensis_contig11.2255.1 vs. uniprot
Match: A0A7K4JH83_GEOCA (S39A7 protein (Fragment) n=1 Tax=Geococcyx californianus TaxID=8947 RepID=A0A7K4JH83_GEOCA) HSP 1 Score: 125 bits (313), Expect = 2.300e-33 Identity = 80/152 (52.63%), Postives = 101/152 (66.45%), Query Frame = 1
Query: 100 LRISGVLNLAADALHNLTDGLAIGAAFAAGGSRLGVGTMLATLLHELPHEIGDYTVLVQSGFTKWQAIGAQFCTAIAAFAGAALGLVATGCEGMEQV-LLAFTAGGFLYVAG-SLIPEILD--GPPPTALRAAGEMGAMATGVALMAGVALL 543
L +SG LNLAAD HN TDGLA+GA+FAAG + LG T L LLHELPHE+GD+ +LVQSG TK QA+ Q TA+ A AGAA L+A G + +L FTAGGF+YV S++PE+L GP P ALR +AL+AG+A++
Sbjct: 1 LAVSGYLNLAADVAHNFTDGLALGASFAAGPA-LGTVTALTVLLHELPHEVGDFAILVQSGCTKRQAMQLQLVTALGAVAGAACSLLAEGAGAAATLAVLPFTAGGFIYVGTVSVLPELLRDAGPLPAALRL----------LALLAGLAMM 141
BLAST of mRNA_S-ischiensis_contig11.2255.1 vs. uniprot
Match: A0A132A5N3_SARSC (Zinc transporter SLC39A7-like protein n=1 Tax=Sarcoptes scabiei TaxID=52283 RepID=A0A132A5N3_SARSC) HSP 1 Score: 126 bits (317), Expect = 4.070e-33 Identity = 74/148 (50.00%), Postives = 102/148 (68.92%), Query Frame = 1
Query: 106 ISGVLNLAADALHNLTDGLAIGAAFAAGGSRLGVGTMLATLLHELPHEIGDYTVLVQSGFTKWQAIGAQFCTAIAAFAGAALGLVATGCEGMEQVLLAFTAGGFLYVAG-SLIPEILDGPPPTALRAAGEMGAMATGVALMAGVALLE 546
+SG+LNL AD LHNLTDGLAIGA FAAGGS +G T L+HE+PHEIGDY +L+Q+G+ + A+ Q TAI A G +GL G + Q++L TAGGF+Y+A S++PE+L+G + L++ E+ A+ GVA+M +AL E
Sbjct: 72 VSGILNLIADFLHNLTDGLAIGATFAAGGS-MGAITAFTILMHEIPHEIGDYAMLIQAGYLRRNAMALQLVTAIGALIGTFIGLHYGGLDYATQIILPITAGGFIYIATVSIVPELLEGKI-SHLQSFYELTALFIGVAMMYWIALNE 217
BLAST of mRNA_S-ischiensis_contig11.2255.1 vs. uniprot
Match: A0A7S2S064_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S064_9STRA) HSP 1 Score: 125 bits (314), Expect = 4.950e-33 Identity = 73/149 (48.99%), Postives = 98/149 (65.77%), Query Frame = 1
Query: 100 LRISGVLNLAADALHNLTDGLAIGAAFAAGGSRLGVGTMLATLLHELPHEIGDYTVLVQSGFTKWQAIGAQFCTAIAAFAGAALGLVATGCEGMEQVLLAFTAGGFLYVAGSLIPEILDGPPPTALRAAGEMGAMATGVALMAGVALLE 546
L+ + LNLAAD+LHN TDG+AI A+F +GG LG+ T L+ L+HELPHEIGD+++L Q+G TK QAIG QFCTAI AFAG GL + ++LA +GGF+Y+A + L + ++ E+ A + GVALM VA LE
Sbjct: 38 LQAAAYLNLAADSLHNFTDGVAIAASFMSGGRGLGLATSLSVLVHELPHEIGDFSILRQNGCTKLQAIGLQFCTAIFAFAGTLAGLQFKAFDAHSDLILAVVSGGFVYIATMSVMAELMAHESSLFQSFIEVLAFSFGVALMVLVAELE 186
BLAST of mRNA_S-ischiensis_contig11.2255.1 vs. uniprot
Match: A0A1Y3BBP3_EURMA (Zinc transporter SLC39A7-like protein n=3 Tax=Pyroglyphidae TaxID=6952 RepID=A0A1Y3BBP3_EURMA) HSP 1 Score: 127 bits (320), Expect = 1.370e-32 Identity = 75/155 (48.39%), Postives = 103/155 (66.45%), Query Frame = 1
Query: 88 SWGRLRISGVLNLAADALHNLTDGLAIGAAFAAG-GSRLGVGTMLATLLHELPHEIGDYTVLVQSGFTKWQAIGAQFCTAIAAFAGAALGLVATGCEGMEQVLLAFTAGGFLYVAG-SLIPEILDGPPPTALRAAGEMGAMATGVALMAGVALLE 546
S R +SG+LNL AD LHN TDGLAIGA FAAG G ++G+ T + LLHE+PHEIGDY +L++SG+ + AI Q TA+ A G A+GL E Q +L TAGGF+Y+A S+IPE+L+ + ++ E+ A+ G+A+M G+AL E
Sbjct: 157 SQSRHLVSGILNLIADFLHNFTDGLAIGATFAAGHGPQMGIITAVTILLHEIPHEIGDYAILIRSGYRRRSAILLQLVTAVGALMGTAVGLHYGNLEHATQFILPITAGGFIYIATVSVIPELLETKASSHGQSIMEIFALLVGIAMMYGIALNE 311
BLAST of mRNA_S-ischiensis_contig11.2255.1 vs. uniprot
Match: A0A6P6XVL1_DERPT (protein catecholamines up-like n=1 Tax=Dermatophagoides pteronyssinus TaxID=6956 RepID=A0A6P6XVL1_DERPT) HSP 1 Score: 126 bits (317), Expect = 6.930e-32 Identity = 80/163 (49.08%), Postives = 105/163 (64.42%), Query Frame = 1
Query: 67 DNGGAGFSWGRLRISGVLNLAADALHNLTDGLAIGAAFAAG-GSRLGVGTMLATLLHELPHEIGDYTVLVQSGFTKWQAIGAQFCTAIAAFAGAALGLVATGCEGMEQVLLAFTAGGFLYVAG-SLIPEILDGPPPTAL-RAAGEMGAMATGVALMAGVALLE 546
D G R +SG+LNL AD LHN TDGLAIGA FAAG GS++GV T + LLHE+PHEIGDY +L+QSG+ + AI Q TAI A G A+GL E Q +L TAGGF+Y+A S+IPE+L+ ++ ++ E+ A+ GVA+M +AL E
Sbjct: 179 DAGSLSSGQSRHLVSGILNLIADFLHNFTDGLAIGATFAAGHGSQMGVITAVTILLHEIPHEIGDYAILIQSGYRRRSAILLQLVTAIGALMGTAVGLHYGTLEHATQFILPITAGGFIYIATVSVIPELLETTKSSSHGQSIKEISALLVGVAMMYFIALNE 341
BLAST of mRNA_S-ischiensis_contig11.2255.1 vs. uniprot
Match: A0A7S0LI07_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LI07_9EUKA) HSP 1 Score: 122 bits (306), Expect = 1.090e-31 Identity = 74/149 (49.66%), Postives = 103/149 (69.13%), Query Frame = 1
Query: 106 ISGVLNLAADALHNLTDGLAIGAAFAAGGSRLGVGTMLATLLHELPHEIGDYTVLVQSGFTKWQAIGAQFCTAIAAFAGAALGLVATGCEGMEQVLLAFTAGGFLYVAG-SLIPEIL-DGPPPTALRAAGEMGAMATGVALMAGVALLE 546
++G LNLAADA HN TDGL +GAAF +G+ + +A L+HE+PHEIGD +L+Q+GF+KW+AI AQ CTAIAA G A+ L +TG + LL FTAGGF+YVA ++P +L +G +L+ ++GAM G+ +M GV +LE
Sbjct: 54 VAGYLNLAADAAHNFTDGLMLGAAFRTSWE-VGISSTIAVLVHEVPHEIGDVAILMQAGFSKWKAIRAQACTAIAALLGTAVAL-STG-QAEAATLLNFTAGGFVYVATVDVLPPLLREGGVLESLQ---QLGAMGAGIGMMVGVLVLE 196 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2255.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig11.2255.1 >prot_S-ischiensis_contig11.2255.1 ID=prot_S-ischiensis_contig11.2255.1|Name=mRNA_S-ischiensis_contig11.2255.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=185bp MGGRGDDVGRRKKDDDHAGKAGDNGGAGFSWGRLRISGVLNLAADALHNLback to top mRNA from alignment at S-ischiensis_contig11:2280941..2282393+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig11.2255.1 ID=mRNA_S-ischiensis_contig11.2255.1|Name=mRNA_S-ischiensis_contig11.2255.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1453bp|location=Sequence derived from alignment at S-ischiensis_contig11:2280941..2282393+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig11:2280941..2282393+ >mRNA_S-ischiensis_contig11.2255.1 ID=mRNA_S-ischiensis_contig11.2255.1|Name=mRNA_S-ischiensis_contig11.2255.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1110bp|location=Sequence derived from alignment at S-ischiensis_contig11:2280941..2282393+ (Schizocladia ischiensis KU_0333)back to top |