mRNA_S-ischiensis_contig11.2226.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig11.2226.1 vs. uniprot
Match: A0A7S3XNY6_HETAK (Protein DPCD (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNY6_HETAK) HSP 1 Score: 166 bits (421), Expect = 1.210e-48 Identity = 83/179 (46.37%), Postives = 110/179 (61.45%), Query Frame = 1
Query: 19 GGVRNAIALGDKVRVQTTFDDKTELVSNDAYVIRSR-GRRWRSPDTLGRVSPWEYEIGDPPKVR--ERGPIHRVEGTDLKSALYIGLDNPTFHPRDSGQSWEWHIRNLPYPVETYLLSVNANEQRVVLRTTNKKYFNKWAVPALVRAGMELEEGRLSRVHSGSTLVVSYSKPCAILEAE 546
G + I + DK+RVQTTF D TELV + RRWRS D LGR WE+EIGDPP R + VEG ++ NP+FHPRD+ + WEW +RNLPYP++TY ++V +VLRT+NKKYF +W VP LVR G+ LE+ + H +TL++ Y+KP A+LE E
Sbjct: 13 GATSSTIPIQDKLRVQTTFVDGTELVEEFSAASGDLLARRWRSADALGRQGAWEHEIGDPPAARGGQASEAAVVEG------MFTSRVNPSFHPRDNTECWEWRVRNLPYPLDTYSITVEKEGTELVLRTSNKKYFKRWKVPFLVRLGLLLEDEHIEFDHQNNTLIIQYAKPTAVLELE 185
BLAST of mRNA_S-ischiensis_contig11.2226.1 vs. uniprot
Match: W4FTS3_9STRA (Protein DPCD n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FTS3_9STRA) HSP 1 Score: 159 bits (401), Expect = 1.390e-45 Identity = 84/211 (39.81%), Postives = 122/211 (57.82%), Query Frame = 1
Query: 1 MLTAHAGGVRNAIALGDKVRVQTTFDDKTELVSNDAYVIRSRG----RRWRSPDTLGRVSPWEYEIGDPPKVRERGPIHRVEGTDLKSALYIGLDNPTFHPRDSGQSWEWHIRNLPYPVETYLLSVNANEQRVVLRTTNKKYFNKWAVPALVRAGMELEEGRLSRVHSGSTLVVSYSKPCAILEAERAAYEGDLRANGAANGGGHAPECQQ 621
M T H GG N G + R+ TTF D E+V + Y SR RRW++P TLG WE+E+G+P + V D+ + NP F R+S + WEW +RNLPYP +TYL++++ + Q +++RTTNKKYF ++ +PA+ RA + L+ LS HS +TLV+ Y KP A+LEAE+ + L+ G GG P+C+Q
Sbjct: 5 MFTLHPGGTSNCAVAGGRSRIHTTFADGVEMV--EEYTADSRPQILVRRWKAPTTLGGDGKWEFEVGEPT-------VDTVVEKDI--GIIPSGTNPIFLCRESTEVWEWRVRNLPYPKDTYLITIDESSQELIIRTTNKKYFKRFRIPAMARANLPLDRSALSHSHSNNTLVIQYDKPDAVLEAEQTSLAERLQ--GTKRDGGD-PQCRQ 201
BLAST of mRNA_S-ischiensis_contig11.2226.1 vs. uniprot
Match: A0A485KGI5_9STRA (Protein DPCD n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KGI5_9STRA) HSP 1 Score: 154 bits (390), Expect = 6.520e-44 Identity = 79/212 (37.26%), Postives = 118/212 (55.66%), Query Frame = 1
Query: 1 MLTAHAGGVRNAIALGDKVRVQTTFDDKTELVS-----NDAYVIRSRGRRWRSPDTLGRVSPWEYEIGDPPKVRERGPIHRVEGTDLKSALYIGLDNPTFHPRDSGQSWEWHIRNLPYPVETYLLSVNANEQRVVLRTTNKKYFNKWAVPALVRAGMELEEGRLSRVHSGSTLVVSYSKPCAILEAERAAYEGDLRANGAANGGGHAPECQQ 621
M H GG N G + R+ TTF D E+V N ++ RRW++P LG WE+E+G+P I V G D + + NP F R++ + WEW +RNLPYP +TYL+S++ + Q +V+RTTNKKY+ ++ VPA+ RA + L+ LS H+ +TLV+ Y KP ++EAER + L+ G+ G +C+Q
Sbjct: 1 MFRGHPGGTSNCAVAGGRARIHTTFADGVEMVEEYSQCNPPQILV---RRWKAPTALGGDGKWEFEVGEPTAA-----IDVVGGADKNIGIAVNGANPIFVCREATEVWEWRVRNLPYPKDTYLISIDNSTQEIVIRTTNKKYYKRFRVPAMARANLPLDTFALSHSHANNTLVIQYDKPEDVIEAERKSITERLK--GSRGGANDPQQCRQ 202
BLAST of mRNA_S-ischiensis_contig11.2226.1 vs. uniprot
Match: A0A024TDT6_9STRA (Protein DPCD n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TDT6_9STRA) HSP 1 Score: 150 bits (379), Expect = 2.800e-42 Identity = 74/187 (39.57%), Postives = 109/187 (58.29%), Query Frame = 1
Query: 1 MLTAHAGGVRNAIALGDKVRVQTTFDDKTELVSNDAYVIRSRG----RRWRSPDTLGRVSPWEYEIGDPPKVRERGPIHRVEGTDLKSALYIGLDNPTFHPRDSGQSWEWHIRNLPYPVETYLLSVNANEQRVVLRTTNKKYFNKWAVPALVRAGMELEEGRLSRVHSGSTLVVSYSKPCAILEAER 549
M + H GG N G + R+ TTF D E+V + Y R RRW++P LG WE+E+G+P + V D+ + NP F R+S +WEW +RNLPYP +TY+++++ Q +++RTTNKKYF ++ VPA+VRA + L++ LS HS +TLVV Y KP ++EAE+
Sbjct: 5 MFSVHPGGTSNCAIAGGRSRIHTTFSDGVEMV--EEYTADGRPQLLVRRWKAPTALGGDGKWEFEVGEPT-------LDTVVEKDI--GIVPSGTNPIFLCRESTATWEWRVRNLPYPKDTYVITIDQATQEIIIRTTNKKYFKRFRVPAMVRASLPLQQSSLSHTHSNNTLVVQYEKPDEVVEAEK 180
BLAST of mRNA_S-ischiensis_contig11.2226.1 vs. uniprot
Match: A0A1V9ZUR2_9STRA (Protein DPCD n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZUR2_9STRA) HSP 1 Score: 142 bits (359), Expect = 2.480e-39 Identity = 81/209 (38.76%), Postives = 111/209 (53.11%), Query Frame = 1
Query: 1 MLTAHAGGVRNAIALGDKVRVQTTFDDKTELVSNDAYVIRSR--GRRWRSPDTLGRVSPWEYEIGDPPKVRERGPIHRVEGTDLKSALYIGLDNPTFHPRDSGQSWEWHIRNLPYPVETYLLSVNANEQRVVLRTTNKKYFNKWAVPALVRAGMELEEGRLSRVHSGSTLVVSYSKPCAILEAERAAYEGDLRANGAANGGGHAPECQQ 621
M H+GG +A G + RV TTF D E++ + RRW++P LG WE+EIG+P RG D+ L P F R+S WEW +RNLPYP +TY +SV+ + Q + +RT+NKKYF ++ VPALVR G L+ LS H+ STLVV Y+KP ++E ER LR + P+C+Q
Sbjct: 1 MFQNHSGGKSTLVAAGGRKRVHTTFADGVEMIEEYTKDGSPQLLARRWKAPTALGGDGKWEFEIGEPATDDTRG-------RDI--GLAPSCTTPVFLCRESPTCWEWRVRNLPYPKDTYAISVDDDSQTITIRTSNKKYFKRFQVPALVRGGHRLDAQALSFDHANSTLVVQYAKPLDVVELERKTMAELLRGTETSE-----PQCRQ 195
BLAST of mRNA_S-ischiensis_contig11.2226.1 vs. uniprot
Match: T0Q6P4_SAPDV (Protein DPCD n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0Q6P4_SAPDV) HSP 1 Score: 138 bits (348), Expect = 1.120e-37 Identity = 78/211 (36.97%), Postives = 109/211 (51.66%), Query Frame = 1
Query: 1 MLTAHAGGVRNAIALGDKVRVQTTFDDKTELVSNDAYVIRSRG----RRWRSPDTLGRVSPWEYEIGDPPKVRERGPIHRVEGTDLKSALYIGLDNPTFHPRDSGQSWEWHIRNLPYPVETYLLSVNANEQRVVLRTTNKKYFNKWAVPALVRAGMELEEGRLSRVHSGSTLVVSYSKPCAILEAERAAYEGDLRANGAANGGGHAPECQQ 621
M +H+GG + G + R+ TTF D ELV + Y RRW++ LG WEYEIG+P EG L PTF R++ WEW +RNLPYP ETY +S++ + Q + +RT+NKKYF ++ +PALVR L+ +S H +TLVV Y KP A++ ER L A G++ P+C+Q
Sbjct: 1 MYRSHSGGNSAVVVAGGRKRLHTTFADGVELVED--YTKDGPPELLVRRWKTTTALGGDGRWEYEIGEPLP---------AEGRSRDIGLAPSSTQPTFLCREAPAHWEWRVRNLPYPKETYAISIDDDVQTISIRTSNKKYFKRFQIPALVRQNQRLDAAAISFTHESNTLVVRYKKPDAVVAVERQVLRERLHAAGSSE-----PQCRQ 195
BLAST of mRNA_S-ischiensis_contig11.2226.1 vs. uniprot
Match: A0A7S2WU54_9STRA (Protein DPCD n=2 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WU54_9STRA) HSP 1 Score: 136 bits (343), Expect = 6.510e-37 Identity = 74/197 (37.56%), Postives = 103/197 (52.28%), Query Frame = 1
Query: 13 HAGGVRNAIALGDKVRVQTTFDDKTELVSNDAYVIRSRG-RRWRSPDTLGRVSPWEYEIGDPPKVRERGPIHRVEGTDLKSALYIGLDNPTFHPRDSGQSWEWHIRNLPYPVETYLLSVNANEQRVVLRTTNKKYFNKWAVPALVRAGMELEEGRLSRV-HSGSTLVVSYSKPCAILEAERAAYEGDLRANGAANGG 597
H GG A+ G K ++T F D E+V V R RRW+ P G+ WEYE+G+P K E + NP+F RDS WEW +RN+PYP++ Y LS++ +Q +VLRT+NKKYF ++ +P+L R +L+ G L V H+ TL + Y KP I++ EGD R NGG
Sbjct: 5 HHGGKSTAVTTGGKHIIRTAFQDGVEMVEEIDVVTRELVVRRWKVPKAFGKEGGWEYELGEPQKTANSSESLLCESSSR---------NPSFVARDSTDFWEWRVRNIPYPIQVYQLSIDETKQEIVLRTSNKKYFKRFYIPSLKRENRKLDPGSLQLVDHTNDTLTIRYRKPLDIVK-----LEGDERRQKIENGG 187
BLAST of mRNA_S-ischiensis_contig11.2226.1 vs. uniprot
Match: A0A067CDT4_SAPPC (Protein DPCD n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CDT4_SAPPC) HSP 1 Score: 135 bits (341), Expect = 1.260e-36 Identity = 75/211 (35.55%), Postives = 105/211 (49.76%), Query Frame = 1
Query: 1 MLTAHAGGVRNAIALGDKVRVQTTFDDKTELVSNDAYVIRSRG----RRWRSPDTLGRVSPWEYEIGDPPKVRERGPIHRVEGTDLKSALYIGLDNPTFHPRDSGQSWEWHIRNLPYPVETYLLSVNANEQRVVLRTTNKKYFNKWAVPALVRAGMELEEGRLSRVHSGSTLVVSYSKPCAILEAERAAYEGDLRANGAANGGGHAPECQQ 621
M +H+GG + G + R+ TTF D ELV + Y RRW++ LG WEYEIG+P EG L PTF R++ WEW +RNLPYP ETY + ++ + Q +V+RT+NKKYF ++ +PA+VR L +S H +TLVV Y KP A++ E L G + P+C+Q
Sbjct: 1 MYRSHSGGNSTVVVAGGRKRLHTTFADGVELV--EEYTKDGPPELLVRRWKNTTALGGDGRWEYEIGEPLP---------AEGRSRDIGLAPSSTQPTFLCREAATHWEWRVRNLPYPKETYAIGIDDDAQTIVIRTSNKKYFKRFQIPAMVRQSQRLSAAAVSFTHDNNTLVVHYKKPDAVMAVEHQELRDRLHGAGTSE-----PQCRQ 195
BLAST of mRNA_S-ischiensis_contig11.2226.1 vs. uniprot
Match: A0A0X3NYC5_SCHSO (Protein DPCD (Fragment) n=2 Tax=Diphyllobothriidae TaxID=28843 RepID=A0A0X3NYC5_SCHSO) HSP 1 Score: 131 bits (329), Expect = 1.420e-34 Identity = 67/177 (37.85%), Postives = 103/177 (58.19%), Query Frame = 1
Query: 28 RNAIALGDKVRVQTTFDDKTELVSNDAYVIRSR---GRRWRSPDTLGRVSPWEYEIGDPPKVRERGPIHRVEGTDLKSALYIGLDNPTFHPRDSGQSWEWHIRNLPYPVETYLLSVNANEQRVVLRTTNKKYFNKWAVPALVRAGMELEEGRLSRVHSGSTLVVSYSKPCAILEAER 549
+ +I + +V TFDD E+V + Y R++ R+W+ P LG W YE+G+PP+VR + L + NP F D+ ++W IRNLPYP+ TY LS+ + + +VLRTTNKKYF ++ +P L R G++L++ L++ HS +TLV+SY KP L+ E+
Sbjct: 31 KTSIVQDGRTKVHYTFDDSREMV--EQYDNRTQVLIERKWKCPTQLGGEGNWVYEVGEPPQVR----------STLFDDIQESNANPIFSRLDTKNDFQWRIRNLPYPLSTYDLSIEDDGETIVLRTTNKKYFKRFGIPDLHRLGLKLDQKNLTKTHSNNTLVISYKKPVVYLQFEK 195
BLAST of mRNA_S-ischiensis_contig11.2226.1 vs. uniprot
Match: A0A6G0XJM7_9STRA (Protein DPCD n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJM7_9STRA) HSP 1 Score: 129 bits (324), Expect = 2.950e-34 Identity = 67/168 (39.88%), Postives = 95/168 (56.55%), Query Frame = 1
Query: 130 RRWRSPDTLGRVSPWEYEIGDPPKVRERGPIHRVEGTDLKSALYIGLD----NPTFHPRDSGQSWEWHIRNLPYPVETYLLSVNANEQRVVLRTTNKKYFNKWAVPALVRAGMELEEGRLSRVHSGSTLVVSYSKPCAILEAERAAYEGDLRANGAANGGGHAPECQQ 621
RRW++P TLG W YEIG+ D S IG+ NP F R++ + WEW +RNLPYP ETYL+S++ Q +V+RTTNKKYF ++ +PA+ RA + L+ LS HS +TLV+ Y KP ++E ER + + L+ G P+C+Q
Sbjct: 32 RRWKAPSTLGGDGKWMYEIGE------------ATPGDGSSEKDIGISLSGVNPIFLCREAEEVWEWRVRNLPYPKETYLISIDDTTQEIVIRTTNKKYFKRFRIPAMARANLRLDGTSLSHSHSNNTLVIQYEKPDQVIEDERKSLKERLKREG-------DPQCRQ 180 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2226.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig11.2226.1 >prot_S-ischiensis_contig11.2226.1 ID=prot_S-ischiensis_contig11.2226.1|Name=mRNA_S-ischiensis_contig11.2226.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=209bp MLTAHAGGVRNAIALGDKVRVQTTFDDKTELVSNDAYVIRSRGRRWRSPDback to top mRNA from alignment at S-ischiensis_contig11:2121734..2123979+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig11.2226.1 ID=mRNA_S-ischiensis_contig11.2226.1|Name=mRNA_S-ischiensis_contig11.2226.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2246bp|location=Sequence derived from alignment at S-ischiensis_contig11:2121734..2123979+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig11:2121734..2123979+ >mRNA_S-ischiensis_contig11.2226.1 ID=mRNA_S-ischiensis_contig11.2226.1|Name=mRNA_S-ischiensis_contig11.2226.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1254bp|location=Sequence derived from alignment at S-ischiensis_contig11:2121734..2123979+ (Schizocladia ischiensis KU_0333)back to top |