mRNA_S-ischiensis_contig11.2223.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig11.2223.1
Unique NamemRNA_S-ischiensis_contig11.2223.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
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BLAST of mRNA_S-ischiensis_contig11.2223.1 vs. uniprot
Match: D8LT67_ECTSI (Poly(A) ribonuclease subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT67_ECTSI)

HSP 1 Score: 323 bits (829), Expect = 3.860e-103
Identity = 161/260 (61.92%), Postives = 195/260 (75.00%), Query Frame = 2 
Query:   59 ETGFEWALGSTALPAPQKRTLQTAAVPEQLWGEFQRQALETLRQLPPDDERLKEIPPKFYAAWPLDDEATRKKGTAGSFGYPSSTYKVINHHDGQAYALRRFDGVRTTAEIAGRATAGWLTLGPHPGLVRLHECFLHHGAVFFTCQYHAGARTLAQRFLETPGGGLLSERLLWSIACQLAAALRAIHAAGLACRNVQPARVLFSELGGRCRLNWLGCMDVLESETRVQQSQVQAQDMRDLGALLLSLGCRTPGAVAAPAE 838
            E GF WA GS AL APQ+RT+ + AVPEQLW EFQ  +L  LRQLPPDDERLKEIPP+FYAA+PLDD A++ +GTAGSFGYPS TYKVI HH+GQA+ALRRFD  RTTA+I    T  WL++  HP + R  E FLH  A+FF   +H GA TL++RF++  GG LLSE LLW + CQL  ALRA HAAG A RNV P+RVL+  +G R R+NW+GC+DVLE ETR Q S++Q QDM DLG+L+L+L CR P  VA+  E
Sbjct:  132 EEGFLWAAGSAALAAPQRRTMHSTAVPEQLWAEFQNHSLSVLRQLPPDDERLKEIPPQFYAAFPLDD-ASKTRGTAGSFGYPSETYKVIQHHNGQAFALRRFDTARTTAKIVAMGTEIWLSMPEHPAITRPREAFLHRNALFFVSDFHPGAETLSERFIQRQGG-LLSEGLLWRLVCQLLGALRATHAAGAALRNVHPSRVLYCLVGDRVRVNWVGCLDVLEYETRKQVSELQRQDMVDLGSLILALACRHPVTVASRGE 389
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BLAST of mRNA_S-ischiensis_contig11.2223.1 vs. uniprot
Match: A0A6H5KPZ2_9PHAE (Pan3_PK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPZ2_9PHAE)

HSP 1 Score: 306 bits (785), Expect = 1.820e-96
Identity = 160/277 (57.76%), Postives = 195/277 (70.40%), Query Frame = 2 
Query:   59 ETGFEWALGSTALPAPQKRTLQTAAVPEQLWGEFQRQALETLRQLPPDDERLKEIPPKFYAAWPLDDEATRKKGTAGSFGYPSSTYKVINHHDGQAYALRRFDGVRTTAEIAGRATAGWLTLGPHPGLVRLHE---------------CFLHHGAVFFTCQYHAGARTLAQRFLETPGGGLLSERLLWSIACQLAAALRAIHAAGLACRNVQPARVLFSELGGRCRLNWLGCMDVLESETRVQQ--SQVQAQDMRDLGALLLSLGCRTPGAVAAPAE 838
            E GF WA GS AL APQ+RT+ + AVPEQLW EFQ  +L  LRQLPPDDERLKEIPP+FYAA+PLDD A++ +GTAGSFGYPS TYKVI HH+GQA+ALRRFD  RTTA+I    T  WL++  HP + R  E                FLH  A+FF   +H GA TL++RF++  GG LLSE LLW + CQL +ALRA HAAG A RNV P+RVL+  +G R R+NW+GC+DVLE ETR Q   S++Q QDM DLG+L+L+L CR P   A+  E
Sbjct:  134 EEGFLWAEGSAALAAPQRRTMHSTAVPEQLWAEFQNHSLSVLRQLPPDDERLKEIPPQFYAAFPLDD-ASKTRGTAGSFGYPSETYKVIQHHNGQAFALRRFDTARTTAKIVAMGTEIWLSMPEHPAITRPREVGKTETRTACGGLPVAFLHRNALFFVSDFHPGAETLSERFIQRQGG-LLSEGLLWRLMCQLLSALRATHAAGAALRNVHPSRVLYCLVGDRVRVNWVGCLDVLEYETRKQARVSELQRQDMVDLGSLILALACRHPVTAASRGE 408
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BLAST of mRNA_S-ischiensis_contig11.2223.1 vs. uniprot
Match: A0A835ZFN0_9STRA (Protein kinase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFN0_9STRA)

HSP 1 Score: 254 bits (650), Expect = 7.200e-76
Identity = 140/279 (50.18%), Postives = 179/279 (64.16%), Query Frame = 2 
Query:   14 GAGMEDLVYEDEEEAETGFEWALGSTALPAPQKRTLQTAAVPEQLWGEFQRQALETLRQLPPDDERLKEIPPKFYAAWPLDDEATRKKGTAGSFGYPSSTYKVINHHDGQAYALRRFDGVRTTAEIAGRATAGWLTLGPHPGLVRLHECFLHHGAVFFTCQYHAGARTLAQRFLETPGGGLLSERLLWSIACQLAAALRAIHAAG--LACRNVQPARVLFSELGGRCRLNWLGCMDVLESETRVQQSQVQAQ----DMRDLGALLLSLGCRTPGAVAAP 832
            G G  DL  E+EEE   GF W  G+ + P P KRT+++ +VP+ LW E QRQ L+ +RQLPP DERLKEIP +FYA +PLDD A +++GT+GSFG+PS+TYKVI++ DG  YALRRF+GVRTTA I       W  +  HPGLV+L E F++ G  FF   YH  A TLAQR+LE PG  LL E LLWSI CQL +A+RA+H A   +ACR++ P  VL    GGR R+NW G  + LE E         A     D++ L   ++S+ CR   A  AP
Sbjct:  290 GEGGRDLHEEEEEE---GFFWTYGAASFPGPPKRTVRSMSVPDGLWAELQRQTLDMMRQLPPSDERLKEIPSRFYAIYPLDD-ANKRRGTSGSFGHPSTTYKVISNTDGLPYALRRFEGVRTTANIMQETLEMWHGVSAHPGLVQLKEAFMYQGCAFFVEDYHPRAETLAQRYLERPGN-LLPEGLLWSIGCQLLSAVRAVHMADARMACRHISPEHVLLLP-GGRVRINWAGVHNALEYEALSTLPAAAAAGRDADIKALACTVISIACRARVAPGAP 562
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BLAST of mRNA_S-ischiensis_contig11.2223.1 vs. uniprot
Match: A0A4D9DAW6_9STRA (Protein kinase domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAW6_9STRA)

HSP 1 Score: 229 bits (583), Expect = 3.810e-66
Identity = 124/255 (48.63%), Postives = 170/255 (66.67%), Query Frame = 2 
Query:   68 FEWALGSTALPAPQKRTLQTAAVPEQLWGEFQRQALETLRQLPPDDERLKEIPPKFYAAWPLDDEATRKKGTAGSFGYPSSTYKVINHHDGQAYALRRFDGVRTTAEIAGRATAGWLTLGPHPGLVRLHECFLHHG-AVFFTCQYHAGARTLAQRFLETPGG------GLLSERLLWSIACQLAAALRAIHAAGLACRNVQPARVLFSELGGRCRLNWLGCMDVLESETRVQQSQVQAQDMRDLGALLLSLGCRT 811
            F+W+LG ++LPAP + TLQ   VPEQL   F  + L+  R LPPDD R KEIPP F+ A+PLDD A + +GTAG+FGYPS TYKV++H DG+AYALRRFD VR+T +I   A   W  +  HP +++L + F+ HG A+FF  +YH GA+++ QR++++           L E+LLWS   QL +A+RA+HAA  ACR + P  VL +  G R RL   G +DVLESETR   +++Q +D+  LG L+L+L  RT
Sbjct:  258 FDWSLGGSSLPAPPRMTLQRMGVPEQLRQFFLLKDLDKGRSLPPDDPRYKEIPPGFHHAYPLDD-AHKARGTAGAFGYPSVTYKVLSHEDGRAYALRRFDSVRSTPKIVAGALETWRRI-QHPNIIKLSKAFIQHGNALFFLHEYHPGAQSVTQRYVDSSRAHSGARPSRLPEKLLWSFVTQLVSAIRAVHAAQAACRMLHPNHVLVTT-GARLRLGCAGVVDVLESETRKTLAELQTEDLAMLGRLILTLATRT 509
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BLAST of mRNA_S-ischiensis_contig11.2223.1 vs. uniprot
Match: A0A7S1Y2R1_9STRA (Hypothetical protein n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y2R1_9STRA)

HSP 1 Score: 180 bits (456), Expect = 6.990e-49
Identity = 103/253 (40.71%), Postives = 146/253 (57.71%), Query Frame = 2 
Query:   92 ALPAPQKRTLQTAAVPEQLWGEFQRQALETLRQLPPDDERLKEIPPKFYAAWPLDDEATRKKGTAGSFGYPSSTYKVINHHDGQAYALRRFDGVRTTA--------EIAGRATAGWLT---LGPHPGLVRLHECFLHHGAVFFTCQYHAGARTLAQRFLETPGGGLLSERLLWSIACQLAAALRAIHAAGLACRNVQPARVLFSELGGRCR--LNWLGCMDVLESETRVQQSQVQAQDMRDLGALLLSLGCRT 811
            ++P P  R+L +    E +W  ++  +LE+ RQ+ P+D R K IP  +   + LD EA +++    SFGYP S ++V +  DG  Y LRRFD VR+ +        E+  +A A  L    +  H GLVR H CF+ H AVFF   YHAGARTL QRF        L+E ++WS+  QL++A+R +H+A LACR +Q   +L +  G   R  +N +G +D LE ETR    ++QA DMRD G +LLSL   T
Sbjct:  148 SMPLPPLRSLPSMGTSEDMWKYYRELSLESERQMEPNDPRHKAIPAPYVNGYVLDQEAQQRRS---SFGYPMSVFRVQSREDGHLYCLRRFDNVRSVSPRIAAVVSELWTKAVANTLRRTRVVDHAGLVRFHRCFMAHRAVFFVHHYHAGARTLRQRFFHIVRPTPLNEAMIWSVCVQLSSAIRTVHSAKLACRTIQLNHILSNIQGSHIRVYINCIGVVDTLEFETRKTVQELQATDMRDFGYILLSLATAT 397
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BLAST of mRNA_S-ischiensis_contig11.2223.1 vs. uniprot
Match: A0A7S2D1C0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D1C0_9STRA)

HSP 1 Score: 170 bits (430), Expect = 9.250e-49
Identity = 88/213 (41.31%), Postives = 137/213 (64.32%), Query Frame = 2 
Query:   89 TALPAPQKRTLQTAAVPEQLWGEFQRQALETLRQLPPDDERLKEIPPKFYAAWPLDDEATR-KKGTAGSFGYPSSTYKVINHHDGQAYALRRFDGVRTTAEIAGRATAGWLTLGPHPGLVRLHECFLHHGAVFFTCQYHAGARTLAQRFLETPGGGLLSERLLWSIACQLAAALRAIHAAGLACRNVQPARVLFSELGGRCRLNWLGCMDVLE 724
            +++P P +++L T  +PE L    Q Q+ + LRQL PDD+R KEIPP++++ W LD   ++ K+  +GS GYPSS +KV++  DG  YALRR D VRTTA+IA      W  +  HP + RL   F+++ A+FF  +Y   A+TLA+R+++      ++ER+LWS   QL+AA+R +H+  +ACR + P  ++ +  G R RL  +G +DV+E
Sbjct:    6 SSVPTPLRKSLATMVLPEPLRQHLQAQSKDMLRQLEPDDDRYKEIPPRYHSVWHLDKRTSKTKRHASGSLGYPSSIFKVVSEEDGVTYALRRMDKVRTTAKIAAVVMEQWQHVR-HPNIARLQRAFVYNKALFFLHEYWPTAQTLAERYIDAREP--ITERMLWSYLVQLSAAVRTVHSLNMACRCISPTHIMVTS-GSRVRLGAVGIVDVVE 214
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BLAST of mRNA_S-ischiensis_contig11.2223.1 vs. uniprot
Match: A0A7S2RA35_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RA35_9STRA)

HSP 1 Score: 174 bits (442), Expect = 2.260e-46
Identity = 101/249 (40.56%), Postives = 151/249 (60.64%), Query Frame = 2 
Query:   62 TGFEWALGSTALPAPQKRTLQTAAVPEQLWGEFQRQALETLRQLPPDDERLKEIPPKFYAAWPLDDEATRKKGTAGSFGYPSSTYKVINHHDGQAYALRRFDGVRTTAEIAGRATAGWLTLGPHPGLVRLHECFLHHGAVFFTCQYHAGARTLAQRFLETPGGGLLSERLLWSIACQLAAALRAIHAAGLACRNVQPARVLFSELGGRCRLNWLGCMDVLESETRVQQSQVQAQDMRDLGALLLSLGCR 808
            +G    +  T+ PAP ++ + +  +   L    Q QALE LR+L PDDER KEIPP++++ +PLD E+ + +  +GSFGYPS+ +KV+   D   YALRRFD VRTT +IA  A   W +L  HP +V LH+CF++  A+FF   Y   A+TL +R++ +     + E +LWS   Q+ AA+R +H AG ACR + PA +L +  G R R+  +G +DVLE +      + Q +D+  LG  LL++  R
Sbjct:  166 SGTPHGVSLTSSPAPLRQHVGSLNMNPALRLHLQTQALELLRRLEPDDERHKEIPPRYHSIFPLDHES-KSRQASGSFGYPSAVFKVVGTQDSVTYALRRFDNVRTTPKIAQVAQDRWGSLR-HPNIVALHKCFVYQKALFFVHAYWPTAQTLIERYVGSRQP--VPEHVLWSYLIQITAAIRTVHGAGQACRCIGPAHILVTS-GSRIRIGGIGVIDVLEYDQVKSVVEHQREDIVSLGMTLLTVASR 409
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BLAST of mRNA_S-ischiensis_contig11.2223.1 vs. uniprot
Match: A0A7S1G2Y6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G2Y6_9STRA)

HSP 1 Score: 169 bits (427), Expect = 8.570e-46
Identity = 105/255 (41.18%), Postives = 149/255 (58.43%), Query Frame = 2 
Query:   89 TALPAPQKRTLQTAAVPEQLWGEFQRQALETLRQLPPDDERLKEIPPKFYAAWPLDDEATRKKGTAGSFGYPSSTYKVINHHDGQAYALRRFDGVRTTA---EIAGRATAGWLTLGPHPGLVRLHECFLHHGAVFFTCQYHAGARTLAQRFLETPGGGL-LSERLLWSIACQLAAALRAIHAAGLACRNVQ-PARVLFSELGGRCRLNWLGCMDVLESETRVQQSQVQAQDMRDLGALLLSLGCRTPGAVAAPAE 838
            T +PAP++RTL +  +P+ +   +  ++   L +   DD R KE+PP+F     LD +++  +G  GS GY ++ YKV+NH DG AY LRR DG+R T     +    +A W  +  H  ++ L    +H  A+FF   Y  GA++LA+RFL   G    L E LLWS+ACQLA A+RA H A LA R V  PAR+L    G R R N  G +DVLE+E++   +++QA D+  LG LLL+L  R+  A A P E
Sbjct:   23 TVVPAPRRRTLWSQFLPKNMAALYAARSALILSESAADDPRYKELPPRFGRMRLLDGDSS-VRGATGSTGYNTTVYKVVNHDDGMAYVLRRVDGLRRTTMSPRVCEAVSARWSKVA-HGAVIPLRGVSVHGAALFFLHDYVPGAQSLAERFLTGAGAAAPLPEALLWSVACQLATAVRACHRAALAMRCVHNPARMLLDAFG-RVRFNGAGLLDVLEAESKKSLAELQAGDVLGLGYLLLALATRSAAASATPQE 274
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BLAST of mRNA_S-ischiensis_contig11.2223.1 vs. uniprot
Match: A0A6G0WIP8_9STRA (Protein kinase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WIP8_9STRA)

HSP 1 Score: 168 bits (425), Expect = 1.520e-44
Identity = 95/245 (38.78%), Postives = 144/245 (58.78%), Query Frame = 2 
Query:   86 STALP-APQKRTLQTAAVPEQLWGEFQRQALETLRQLPPDDERLKEIPPKFYAAWPLDDEATRKKGTAGSFGYPSSTYKVINHHDGQAYALRRFDGVRTTAEIAGRATAGWLTLGPHPGLVRLHECFLHHGAVFFTCQYHAGARTLAQRFLETPGGGLLSERLLWSIACQLAAALRAIHAAGLACRNVQPARVLFSELGGRCRLNWLGCMDVLESETRVQQSQV---QAQDMRDLGALLLSLGCR 808
            ST+ P    +R+L + A+   +  +   Q  E +RQ+ P DER KEIP +F   WPLD +    +  AGSFGYPS +YKV++  DG+ YALRR + VRTT  I  +A   W  +  H  LV LH  F+ HGA+FF C+++ GA +L Q+++        SE  LW++  QL+ ALR +HAA LAC+ +   R+L +    R R+  LG +DVLE ++   + +V   Q +D+ ++G +L ++  R
Sbjct:  126 STSSPIVATRRSLASLALAPSIRRQLDAQHEEMVRQIDPSDERYKEIPSQFTCMWPLDHDTVHHRNVAGSFGYPSHSYKVLSETDGRTYALRRIENVRTTPAIVQQAVETWKRI-VHSSLVPLHRAFVSHGALFFLCEFYPGAVSLHQKYIAASAAP--SEAFLWTLLTQLSGALRVVHAAQLACKAIHARRILVTA-HDRIRITGLGVLDVLEYDSLKSKPRVESLQREDVWNVGKVLYAVASR 366
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BLAST of mRNA_S-ischiensis_contig11.2223.1 vs. uniprot
Match: A0A7S1UFK1_9STRA (Hypothetical protein (Fragment) n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFK1_9STRA)

HSP 1 Score: 162 bits (410), Expect = 5.820e-43
Identity = 101/247 (40.89%), Postives = 139/247 (56.28%), Query Frame = 2 
Query:   68 FEWALGSTALPAPQK-RTLQTAAVPEQLWGEFQRQALETLRQLPPDDERLKEIPPKFYAAWPLDDEATRKKGTAGSFGYPSSTYKVINHHDGQAYALRRFDGVRTTAEIAGRATAGWLTLGPHPGLVRLHECFLHHGAVFFTCQYHAGARTLAQRFLETPGGGLLSERLLWSIACQLAAALRAIHAAGLACRNVQPARVLFSELGGRCRLNWLGCMDVLESE--TRVQQSQVQAQDMRDLGALLLSL 799
            F+W  G  A+P      T+   + P +L   ++ + +ETL QL P+D RLKE+P +F++ WPLD E T  +  AGSFG+PSS YKVI+ +DG+AY  RRFD VR  A++A  A   W  +  H  +V L E  +    VFF   +H GAR+L  R   T  G    E ++WS  CQ+ AA+RA H AG A R V    +L +    R R+   G  DV+E E  +R   + +QA D+  LG L LSL
Sbjct:  104 FDWTFGQGAVPVTGVYSTVADLSGPPRLQEYYRTRTMETLAQLDPNDPRLKEVPQEFHSIWPLDAEGTDDRA-AGSFGHPSSVYKVISSNDGRAYVCRRFDTVRPPAKVAAVAQQSWTNIR-HASIVALKEIQVKPSGVFFIHAFHPGARSLKGRIEATRQGA--QENMVWSFLCQVGAAIRAAHLAGAAVRCVDANHILVTP-DARFRVGGTGVYDVIEFEAASRKALADMQAVDIASLGKLALSL 345
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2223.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LT67_ECTSI3.860e-10361.92Poly(A) ribonuclease subunit n=1 Tax=Ectocarpus si... [more]
A0A6H5KPZ2_9PHAE1.820e-9657.76Pan3_PK domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835ZFN0_9STRA7.200e-7650.18Protein kinase domain-containing protein n=1 Tax=T... [more]
A0A4D9DAW6_9STRA3.810e-6648.63Protein kinase domain-containing protein n=3 Tax=M... [more]
A0A7S1Y2R1_9STRA6.990e-4940.71Hypothetical protein n=2 Tax=Grammatophora oceanic... [more]
A0A7S2D1C0_9STRA9.250e-4941.31Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2RA35_9STRA2.260e-4640.56Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1G2Y6_9STRA8.570e-4641.18Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A6G0WIP8_9STRA1.520e-4438.78Protein kinase domain-containing protein n=1 Tax=A... [more]
A0A7S1UFK1_9STRA5.820e-4340.89Hypothetical protein (Fragment) n=4 Tax=Phaeomonas... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig11contigS-ischiensis_contig11:2100090..2105499 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons4
Model size840
Cds size840
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig11.2223.1prot_S-ischiensis_contig11.2223.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig11 2100090..2105499 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815578.7611434-CDS-S-ischiensis_contig11:2100089..21004081622815578.7611434-CDS-S-ischiensis_contig11:2100089..2100408Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 2100090..2100408 +
1695739782.231848-CDS-S-ischiensis_contig11:2100089..21004081695739782.231848-CDS-S-ischiensis_contig11:2100089..2100408Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 2100090..2100408 +
1622815578.772732-CDS-S-ischiensis_contig11:2102101..21022871622815578.772732-CDS-S-ischiensis_contig11:2102101..2102287Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 2102102..2102287 +
1695739782.2399857-CDS-S-ischiensis_contig11:2102101..21022871695739782.2399857-CDS-S-ischiensis_contig11:2102101..2102287Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 2102102..2102287 +
1622815578.7835703-CDS-S-ischiensis_contig11:2104707..21049531622815578.7835703-CDS-S-ischiensis_contig11:2104707..2104953Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 2104708..2104953 +
1695739782.2495022-CDS-S-ischiensis_contig11:2104707..21049531695739782.2495022-CDS-S-ischiensis_contig11:2104707..2104953Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 2104708..2104953 +
1622815578.7963932-CDS-S-ischiensis_contig11:2105410..21054991622815578.7963932-CDS-S-ischiensis_contig11:2105410..2105499Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 2105411..2105499 +
1695739782.2668993-CDS-S-ischiensis_contig11:2105410..21054991695739782.2668993-CDS-S-ischiensis_contig11:2105410..2105499Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 2105411..2105499 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig11.2223.1

>prot_S-ischiensis_contig11.2223.1 ID=prot_S-ischiensis_contig11.2223.1|Name=mRNA_S-ischiensis_contig11.2223.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=280bp
GGGGGGGHGGPRVRGRGGGGDGFRVGAGVNGAPRPAEEDAADRGRAGAAV
GGVPAPGPGDAAAAAARRRAAQGDPPQVLRRLAAGRRGHAEEGHGGVLRV
PQLHVQGDQPPRRPGVRTAALRRRAHHGGDCGAGHGGLADAGATPGAGAA
PRVLPAPRRRLLHLPVPRRGADARPALPRDPGGWSPLRAAALVNSLPAGG
RAPGHPRGGPGVPQRAAGPRSLLRARRPLPPQLARVHGRARVRDARPAIP
GAGAGHARPGRATALPGLPHPRRCRRPRRV
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mRNA from alignment at S-ischiensis_contig11:2100090..2105499+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig11.2223.1 ID=mRNA_S-ischiensis_contig11.2223.1|Name=mRNA_S-ischiensis_contig11.2223.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=5410bp|location=Sequence derived from alignment at S-ischiensis_contig11:2100090..2105499+ (Schizocladia ischiensis KU_0333)
GGCGGCGGAGGCGGGGGCGGGCATGGAGGACCTCGTGTACGAGGACGAGG
AGGAGGCGGAGACGGGTTTCGAGTGGGCGCTGGGGTCAACGGCGCTCCCC
GCCCCGCAGAAGAGGACGCTGCAGACCGCGGCCGTGCCGGAGCAGCTGTG
GGGGGAGTTCCAGCGCCAGGCCCTGGAGACGCTGCGGCAGCTGCCGCCCG
ACGACGAGCGGCTCAAGGAGATCCCCCCCAAGTTCTACGCCGCCTGGCCG
CTGGACGACGAGGCCACGCGGAAGAAGGGCACGGCGGGGTCCTTCGGGTA
CCCCAGCTCCACGTACAAGGTACGCCCCCACACCCGCCAGTTGTGTGTAC
TCACGTTCGGACGAGGTTTCTCGTCTCTGTGCATGCCCTGGACCCGAAGC
ACCCACCAGTTGTACAGCACATACTCGTAGATAGCTTTACACAGCCGGGT
AGGTCGTTTTTCGGGTACCCCAGCTCCACGTACAAGGTACTTACTCGCAC
GCCCCCGCACCCACCAGTTGTACAGCACATACTTCGAAGTAGATAACTTT
GCACGAAGAAGCAGTTGTACAGCACATACTTCGACGTAGATAGCTTTGCT
CGAAGAAGGGCACGGCGGGGCCGTTCGGGTACCCCAGCTCCACGTACAAG
GTACTTATGCCCCCGCACCCGCCAGTTAGGTGTGTGTGTGTACTCACGTT
CAAACGAGGTTTCTCATCTCTGTGCATGCCCTGGACCCGAACGATCCTCG
TCTTTGCTTCTTCTAGTGGATCGCTGGCCAGCTGTAGCCGAAGCCATTTG
CCACGCATCCTATTGGACGGAGCACGCCAGTTGTACAGCACATACTTCGA
AGTAGATAACTTTACACGGCACTCGGCCGGACCCCCCCCGGCCGTCCGGC
TGCCTGTCCCGCCCCCCCGCGTGTTCTTCGTAGATCCGTGAGTGCAGTAC
TACGTAGCAGTTGAATACTTCCAAGTACTGAAGTACTCTACACACGGAAG
TACTTCGAAGCCATGCTGGACTGGACTGTGTATGTACTCATACTATAGTG
CAGTAGTACTCGAGTATGTATATGCTATGTACAGTAGTATATATGTACTC
ATGCTGCACCTGCCGCAGTCCCGAGACCATTGACCCCGCGCCCCACCGGA
GACGTGGCAGATATAGTGCTACTGTAGTATATATATGTACCCACGCTGCG
CCTGCCACAGTCCCGAGACCATTGACCCTGCGCCGCACTGGAGACGTGGC
AGATACAGTAGTACTGTAGTAGTCCGAAATGTACTCTCAATCATGCTGTG
TTTGCCATAAATACCCCGGGGACCGTCCTGACCGAGATCTGCCCCCCGCT
CTGTACAATAGCCCCGGCATTCTGCAGTAGCCCTTTCCTCCCCTCCCCTC
CTAGCTTCCCTCTCCTGAGATCTCCTGCCACTCCATAGCCCACCCCTCCT
CTTCTCGCCCCCCCTTTTTCCGTCCCTGCACCCCCCCCCTTCCCTCCCCG
CCCCACACCCCGCCCTCTCGCGCTCCATGCCCTGCGCCCCCCCTGTCTGT
CACACCTGCCTCGGCCCTGGCGGTGGTGGCGGCGGCGGTGGCGGCGCGTG
TGCGTCCCTCTGCCGGCCGACTGGGCTGCTACCAGTGATGGAATATCTAA
GCAAATCAACCTGGAATATCTAAGCAAATCAACCTACTTCGAAGTATTAA
TGACAGTGCTGATCTATTTTGAGTGGTAGATAAGCGGCGATCTATTTTGA
GTCGTAGATAAGCGGCGAGTTCCAAGCGGCGATCTGTACATCTATCGATA
GTCGATATTCGATAGTTGGACCCACACTAAATCAAAGCATTAGCAGGAAC
AACACGGGGCGAGGTGCCGGCCGCGTCACTAGAGACCTGAACAGGGGCCC
TTCCTTCGCTCGATCCAAGCACTGTAGTTAGTAACGCCATCCACAGAATC
AGTCGAGCTCGACAACTATCTACTCGAGTACTGATTGATATGCCATCACT
GGCTGCCACCAGGTGATCAACCACCACGACGGCCAGGCGTACGCACTGCG
GCGCTTCGACGGCGTGCGCACCACGGCGGAGATTGCGGGGCGGGCCACGG
CGGGCTGGCTGACGCTGGGGCCACACCCGGGGCTGGTGCGGCTCCACGAG
TGCTTCCTGCACCACGGCGCCGTCTTCTTCACCTGCCAGTACCACGCCGT
GAGTCACGCACCCGCTGCCACTGAGTGCGAAGTATAGTACCTGTCTATGT
CTTCTTCACCCGCGAGTACCACTGCGTGAGTCACGCACCACCTGCTGCCG
CTTCATCCCTGCTAAATTGGACTTAACACACTAAAACCGTGGTCAATGGT
CCCGGGACTACGGCAAGCACCACGTGAGTACATATATATATACACTAAAA
CCCTATGATTATACGGACCCCAGGGGTAAAAGAGTAACAGAGCAGTACCC
AGAGCTGAGTGCCATACAGTACCTGTCTACGATCGCCCGTACCTGACCGC
ATCACGTGTGTTGTTATGTACGAGTGCTCATGTTGTGCTTGCCATAGTCA
CGGGACTGTTGACCATCACATGTACGCGTTGTATGAACTGCTGTACGTGC
AGTACTTGTTATACGACTCGTACCTACTGCAAGCTTAACCTACCTGCTCC
GTCTCTAGTCGGTCGAGGCGCGTGGTCAATTGGTCTCTCTCTCTCTCTCT
CGGGACTGCGACAAGCACAGCGTGAGCAATTGCACATGCGTGTGCTTGCC
GCTGTCGCGAGACCATTGACTGTATAGTTGGTGTACCGCCGTCTTGTAGT
TCAACTCCTCTAAGGGTCAAATAGGTACTTCGAATTGCAGTATATATATG
TATATGTGCTCATGGGCTTATCTTGCGACATATTGTAACTTGCGTGCTTG
GTCGACAGCCCAAAGCTTTACTTCAGGTGTGCCCTCCGACAGGAGTAGCT
ATTCAGCCATTGACTCTCGCATCCCAACTACTGGTAGCCCGGGACGGAGC
ATGCCAGGTTTGCACCGGCCAGGCCGCGCACTGGCCAAGCCCGGAAATGC
GTGCGCCGGCAAGCCATACGAGGGGCCGCTCGCTAGACTACGACGAAGTG
TAGTCGTCGGCGAGCACTTGTGAGTCTCTCCGCGGAGTAGCTCTCGCGCG
CGTCGGAACTCTAACGGTCGTGGGAGGAACAACAGGGATGATTGATCCCG
ACCGCTACTTAGGTCGCCGGACAATGCCCGACAGTGGAGTGCTCACTTTG
TACTTACAGTACTGTAGTACTTCGAAGTACTTATAGTAGAGCACCTCCTG
ACACGCTGGCGGCATCGGTGTGCACCCCTACGCTTGGGCCGGTGACAGCC
CGGCACGCTCCGTCCGGCTTTGTTCGTGGGACGCGAGGCGGGCGTATGGC
AAGAATCCGCTGCAGTGCCAATAATTGTACTTCGAAGTACTCGTACTGCG
CGCATGGGCTGGGGGAACTCCCCGCCCGACATGAGTAAAGCTACGTACTT
AGCTTGCTTGACTTTCTGCCAGCATGCTCCGTCCCGGCCTAGTTGGGATG
CGAGAGTCCATGGCTAAATAGGTACCACTGTGGGAGGGCTTGTTATTTGG
GGCTGTCGGCAAAGCACGCAAGGTTCTGTCGCAAGACAAGCCAATAAGTA
CATGTACCATGCACTCACGTTGTGCTTGCCATAGTCCCGAGACCATTGAC
CGCGCGCCTCGGTCGAGACGTGGAGCAGGACCCCTCCCTCCCCTGGCAGA
GCCATGTACTACGTACAGTAGTATGTATCTATACTGCAGAGCCCTACAGT
AGTTCGAAGTAGTGCTCTATGTTACGGAGGTACTCGAGTACACGAGTACT
ACAATATTGCAGATCACTGTACTTCTTTCCAAGCTCTTCTGGGGAAGTAC
TTGGAAGTACCTAGTCTACACACCTCCCGATGCCCGGCGCGTATACAGTG
TTTTCTGTGCCGTGGCGGACGGAGTACTTGGAAGTGAATTGAGTGTGCCA
GTGTACAGTACAGGAATTGCACGGGCTTGCTGTACATGGAAGGACTGCTG
TAGGATACGGTACAGCGGTACAGCTGTATATACTTCATACTTCGAAGTGG
TATATATGTACTTCGAAATACTCTACTCACGTTGTGCTTGCCGTAGTCCC
GAGACCATTGACCACGCGCCGTCGACGGCTGTACGGGTACTAGTAGTAGG
TATAGATGTACCGTACCGTACCGTACCGTACTGTACTGTTCTGTACTGTA
CTGTACGGCAATATCTTTTCCTGTTAAACGCCTCCCGCAACGCAGGGAGT
TCCTGCATCTTTGGGCTCGAGGGGATTCTCCAGAATACCACTCTACTGTG
CGTACTCTACAGCAGTACAGTAGACCTGCTCGTACTGTACTGTACAGCAA
TGCCCATGTCTGATATGCACGTCCCACAGTGCAGGGAGCCCCTGCGTCTT
TGCGCCCGAGGCGATGCTTGGAAAACTTTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCATCACACACACACACGCACACACACACACA
CACACACACACACACACACACACACACACACACCGCGGCACGCCCGCCTA
CCTCGCTCAACCACGCAGGGGGCGCGGACGCTCGCCCAGCGCTTCCTCGA
GACCCCGGGGGGTGGTCTCCTCTCCGAGCGGCTGCTCTGGTCAATAGCCT
GCCAGCTGGCGGCCGCGCTCCGGGCCATCCACGCGGCGGGCCTGGCGTGC
CGCAACGTGCAGCCGGCCCGCGTTCTCTTCTCCGAGCTCGGCGGCCGCTG
CCGCCTCAACTGGCTCGGGTGCATGGACGTGCTCGAGTCCGAGACGCGCG
TCCAGCAATCCCAGGTGATTCATACTTCGAAGTACAAATTGTAACGAGAT
GCAATCGCACGTGTGTGTGATTGACTGTTCTTGTATTAGTAGTTGTTTCA
TTTAAGAATTGAATGTTCTCAGGCCTCCCAGGTAAACCATGGTACGAAGT
ACAAAATTGCGATCGCTATATTTGGTGCCCCCGGGGGGCGCCCTACGAAG
GGCGTATCGGATGGATGACCGTGGAATTTTGACACATGAAAAGAGCTCGA
CGAGTACGTTCATTTGCGCTACCTACAGTTTTCGTATCACGACATCACAT
GGACCGAGCAACAGGTCAATCGATACTCGATAACACTGTTTAGGGGGCCC
TGAATTCGCGTTAAGTAGGAACACCTCCTCCTTTCCACTTGCTTTTTTAT
CTTCAGGCCACAAACTGTTTGGGCAAAAAAAAAAAAAAACGCGCCTTTGC
ACCATGGTTACCTACTCCCAGGTGCAGGCGCAGGACATGCGAGACCTGGG
CGCGCTACTGCTCTCCCTGGGCTGCCGCACCCCCGGCGCTGTCGCCGCCC
CCGCCGAGTC
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Coding sequence (CDS) from alignment at S-ischiensis_contig11:2100090..2105499+

>mRNA_S-ischiensis_contig11.2223.1 ID=mRNA_S-ischiensis_contig11.2223.1|Name=mRNA_S-ischiensis_contig11.2223.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1680bp|location=Sequence derived from alignment at S-ischiensis_contig11:2100090..2105499+ (Schizocladia ischiensis KU_0333)
GGCGGCGGAGGCGGGGGCGGGCATGGAGGACCTCGTGTACGAGGACGAGG
AGGAGGCGGAGACGGGTTTCGAGTGGGCGCTGGGGTCAACGGCGCTCCCC
GCCCCGCAGAAGAGGACGCTGCAGACCGCGGCCGTGCCGGAGCAGCTGTG
GGGGGAGTTCCAGCGCCAGGCCCTGGAGACGCTGCGGCAGCTGCCGCCCG
ACGACGAGCGGCTCAAGGAGATCCCCCCCAAGTTCTACGCCGCCTGGCCG
CTGGACGACGAGGCCACGCGGAAGAAGGGCACGGCGGGGTCCTTCGGGTA
CCCCAGCTCCACGTACAAGGGCGGCGGAGGCGGGGGCGGGCATGGAGGAC
CTCGTGTACGAGGACGAGGAGGAGGCGGAGACGGGTTTCGAGTGGGCGCT
GGGGTCAACGGCGCTCCCCGCCCCGCAGAAGAGGACGCTGCAGACCGCGG
CCGTGCCGGAGCAGCTGTGGGGGGAGTTCCAGCGCCAGGCCCTGGAGACG
CTGCGGCAGCTGCCGCCCGACGACGAGCGGCTCAAGGAGATCCCCCCCAA
GTTCTACGCCGCCTGGCCGCTGGACGACGAGGCCACGCGGAAGAAGGGCA
CGGCGGGGTCCTTCGGGTACCCCAGCTCCACGTACAAGGTGATCAACCAC
CACGACGGCCAGGCGTACGCACTGCGGCGCTTCGACGGCGTGCGCACCAC
GGCGGAGATTGCGGGGCGGGCCACGGCGGGCTGGCTGACGCTGGGGCCAC
ACCCGGGGCTGGTGCGGCTCCACGAGTGCTTCCTGCACCACGGCGCCGTC
TTCTTCACCTGCCAGTACCACGCCGTGATCAACCACCACGACGGCCAGGC
GTACGCACTGCGGCGCTTCGACGGCGTGCGCACCACGGCGGAGATTGCGG
GGCGGGCCACGGCGGGCTGGCTGACGCTGGGGCCACACCCGGGGCTGGTG
CGGCTCCACGAGTGCTTCCTGCACCACGGCGCCGTCTTCTTCACCTGCCA
GTACCACGCCGGGGCGCGGACGCTCGCCCAGCGCTTCCTCGAGACCCCGG
GGGGTGGTCTCCTCTCCGAGCGGCTGCTCTGGTCAATAGCCTGCCAGCTG
GCGGCCGCGCTCCGGGCCATCCACGCGGCGGGCCTGGCGTGCCGCAACGT
GCAGCCGGCCCGCGTTCTCTTCTCCGAGCTCGGCGGCCGCTGCCGCCTCA
ACTGGCTCGGGTGCATGGACGTGCTCGAGTCCGAGACGCGCGTCCAGCAA
TCCCAGGGGGCGCGGACGCTCGCCCAGCGCTTCCTCGAGACCCCGGGGGG
TGGTCTCCTCTCCGAGCGGCTGCTCTGGTCAATAGCCTGCCAGCTGGCGG
CCGCGCTCCGGGCCATCCACGCGGCGGGCCTGGCGTGCCGCAACGTGCAG
CCGGCCCGCGTTCTCTTCTCCGAGCTCGGCGGCCGCTGCCGCCTCAACTG
GCTCGGGTGCATGGACGTGCTCGAGTCCGAGACGCGCGTCCAGCAATCCC
AGGTGCAGGCGCAGGACATGCGAGACCTGGGCGCGCTACTGCTCTCCCTG
GGCTGCCGCACCCCCGGCGCTGTCGCCGCCCCCGCCGAGTCGTGCAGGCG
CAGGACATGCGAGACCTGGGCGCGCTACTGCTCTCCCTGGGCTGCCGCAC
CCCCGGCGCTGTCGCCGCCCCCGCCGAGTC
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