mRNA_S-ischiensis_contig11.2192.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig11.2192.1 vs. uniprot
Match: A0A835ZHQ8_9STRA (Calponin homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHQ8_9STRA) HSP 1 Score: 156 bits (395), Expect = 1.520e-43 Identity = 73/118 (61.86%), Postives = 91/118 (77.12%), Query Frame = 1
Query: 7 DAQVLAAFWIEGVTGMTFPGRFWKSLRDGVLLCQLINAIKPGTISRINRAKAPFPQIENISNFLKACRALGVAEHSLFDPQDLYHKKDIGVVVQCLHALGATVQVTVPDHLGPHLGKK 360
+ + A W+E VTG+ F G F SL+DG LLCQLINAIKPGTI RIN +K PF Q+ENISNFLKACR LGVAE+SLF+ DL+ +KD+G+V++CL ALG+ VQ + P+ GPHLG K
Sbjct: 25 EGERTAQEWMEAVTGVKFEGSFASSLKDGTLLCQLINAIKPGTIKRINSSKMPFKQMENISNFLKACRTLGVAEYSLFETVDLFEEKDVGLVIRCLFALGSAVQSSTPEFAGPHLGAK 142
BLAST of mRNA_S-ischiensis_contig11.2192.1 vs. uniprot
Match: A0A6H5K2V6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2V6_9PHAE) HSP 1 Score: 163 bits (412), Expect = 1.800e-42 Identity = 75/123 (60.98%), Postives = 94/123 (76.42%), Query Frame = 1
Query: 1 QLDAQVLAAFWIEGVTGMTFPGRFWKSLRDGVLLCQLINAIKPGTISRINRAKAPFPQIENISNFLKACRALGVAEHSLFDPQDLYHKKDIGVVVQCLHALGATVQVTVPDHLGPHLGKKSSA 369
Q DA++ A WIEGVTG TFPG+FW SL+DGVLLC ++N+IKPG + +N ++ F ++ENIS FL CR +GV EHSLFD +DL+ K+D+ VVV+CLH LGA VQ TVPD GP LGKKS A
Sbjct: 415 QHDAEMEVALWIEGVTGETFPGKFWSSLKDGVLLCNVLNSIKPGLVPHVNPSRGTFLELENISAFLSGCRKVGVPEHSLFDTKDLHEKRDMQVVVRCLHVLGAAVQSTVPDFRGPFLGKKSEA 537
BLAST of mRNA_S-ischiensis_contig11.2192.1 vs. uniprot
Match: A0A836CGB8_9STRA (Calponin homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGB8_9STRA) HSP 1 Score: 144 bits (362), Expect = 4.580e-39 Identity = 65/110 (59.09%), Postives = 86/110 (78.18%), Query Frame = 1
Query: 31 WIEGVTGMTFPGRFWKSLRDGVLLCQLINAIKPGTISRINRAKAPFPQIENISNFLKACRALGVAEHSLFDPQDLYHKKDIGVVVQCLHALGATVQVTVPDHLGPHLGKK 360
WIE VT + F G F +L+DG +LC+L+NAI+PGT+ +IN + PF Q+ENIS +LK CRALGVAEHSLF+ DLY +KDI +V++CL ALG+T+Q +VP+ GPHLG K
Sbjct: 34 WIEAVTRVKFEGTFAAALKDGSVLCKLLNAIRPGTVKKINTSSMPFKQMENISAYLKGCRALGVAEHSLFETVDLYEEKDISLVIKCLFALGSTIQSSVPEFHGPHLGAK 143
BLAST of mRNA_S-ischiensis_contig11.2192.1 vs. uniprot
Match: D7FJ16_ECTSI (Calponin-homology (CH) domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ16_ECTSI) HSP 1 Score: 145 bits (367), Expect = 1.050e-38 Identity = 68/118 (57.63%), Postives = 88/118 (74.58%), Query Frame = 1
Query: 7 DAQVLAAFWIEGVTGMTFPGRFWKSLRDGVLLCQLINAIKPGTISRINRAKAPFPQIENISNFLKACRALGVAEHSLFDPQDLYHKKDIGVVVQCLHALGATVQVTVPDHLGPHLGKK 360
A+ A WIE VTG G F +LRDGV++C+L+N IKPG + +IN ++ PF Q+ENISNFLK+CRA+GVAEHSLF+ DLY KDIG+VV+C+ ALG+ VQ T P++ GP LG K
Sbjct: 28 SAEDQARAWIEAVTGERVVGPFGDALRDGVVICKLVNTIKPGAVRKINESRMPFKQMENISNFLKSCRAMGVAEHSLFETVDLYEGKDIGLVVRCIFALGSAVQGTCPEYTGPTLGAK 145
BLAST of mRNA_S-ischiensis_contig11.2192.1 vs. uniprot
Match: A0A7S1U3T7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U3T7_9STRA) HSP 1 Score: 142 bits (357), Expect = 3.750e-38 Identity = 67/110 (60.91%), Postives = 84/110 (76.36%), Query Frame = 1
Query: 31 WIEGVTGMTFPGRFWKSLRDGVLLCQLINAIKPGTISRINRAKAPFPQIENISNFLKACRALGVAEHSLFDPQDLYHKKDIGVVVQCLHALGATVQVTVPDHLGPHLGKK 360
WIE +TG FPG F +SL+DG LLC INAIKPGTI R+N +K PF Q+EN+S FL++CR LGVAEH LF+ DLY KD+G+VVQC+HALG V+ ++P + GP LG K
Sbjct: 5 WIEELTGEAFPGGFGESLKDGRLLCLTINAIKPGTIRRVNASKLPFKQMENVSTFLRSCRTLGVAEHDLFETVDLYELKDLGLVVQCIHALGRAVR-SLPGYSGPTLGPK 113
BLAST of mRNA_S-ischiensis_contig11.2192.1 vs. uniprot
Match: A0A7R9YD67_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YD67_9STRA) HSP 1 Score: 142 bits (359), Expect = 9.440e-37 Identity = 66/116 (56.90%), Postives = 86/116 (74.14%), Query Frame = 1
Query: 7 DAQVLAAFWIEGVTGMTFPGRFWKSLRDGVLLCQLINAIKPGTISRINRAKAPFPQIENISNFLKACRALGVAEHSLFDPQDLYHKKDIGVVVQCLHALGATVQVTVPDHLGPHLG 354
+A A WIE VTG+ F G F +SL+DG +LC L+NAI+ G++ +IN +K PF Q+ENISNFL+ACR LGVAEH +F+ DL+ KD+ VVV+C+ ALG VQ TVP+ GPHLG
Sbjct: 13 EAMQDAQEWIEAVTGVAFAGDFGESLKDGQMLCMLVNAIRRGSVRKINESKLPFKQMENISNFLRACRTLGVAEHDVFETVDLFELKDLSVVVKCIWALGRAVQTTVPEFEGPHLG 128
BLAST of mRNA_S-ischiensis_contig11.2192.1 vs. uniprot
Match: A0A6H5L3X7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3X7_9PHAE) HSP 1 Score: 142 bits (357), Expect = 1.620e-35 Identity = 67/110 (60.91%), Postives = 83/110 (75.45%), Query Frame = 1
Query: 31 WIEGVTGMTFPGRFWKSLRDGVLLCQLINAIKPGTISRINRAKAPFPQIENISNFLKACRALGVAEHSLFDPQDLYHKKDIGVVVQCLHALGATVQVTVPDHLGPHLGKK 360
WIE VTG F F + L+DG LC LIN IKPG + R+N ++ PF Q+EN+SNFLKACRA+GVAEHSLF+ DLY KD+G+VV+CLHALG TVQ + P++ GP LG K
Sbjct: 371 WIEDVTGERFAEGFGEELKDGRKLCLLINQIKPGAVRRVNDSRMPFKQMENVSNFLKACRAVGVAEHSLFETVDLYEGKDLGLVVRCLHALGQTVQNSCPEYNGPRLGIK 480
BLAST of mRNA_S-ischiensis_contig11.2192.1 vs. uniprot
Match: A0A7S4D910_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D910_HETAK) HSP 1 Score: 132 bits (333), Expect = 2.700e-35 Identity = 66/120 (55.00%), Postives = 89/120 (74.17%), Query Frame = 1
Query: 7 DAQVLAAFWIEGVTGMTFP-GRFWKSLRDGVLLCQLINAIKPGTISRINR-AKAPFPQIENISNFLKACRALGVAEHSLFDPQDLYHKKDIGVVVQCLHALGATVQVTVPDHLGPHLGKK 360
+A+ A +WIE +TG F K+L+DGVLLC+L NAIKPGTI +IN K F ++NI+NF++AC+ALGV EH +FD DL+ +KD+G+VVQ +HALG T+QVTVP++ GP LG K
Sbjct: 47 EAEEEARWWIEELTGEELQHAEFVKNLKDGVLLCKLANAIKPGTIRKINENTKLAFKLMDNITNFVRACKALGVPEHDVFDTIDLWEEKDVGLVVQTIHALGRTIQVTVPEYNGPILGPK 166
BLAST of mRNA_S-ischiensis_contig11.2192.1 vs. uniprot
Match: A0A0W8CZ75_PHYNI (Luc7 protein 3 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CZ75_PHYNI) HSP 1 Score: 133 bits (335), Expect = 1.050e-32 Identity = 64/119 (53.78%), Postives = 85/119 (71.43%), Query Frame = 1
Query: 10 AQVLAAFWIEGVTGMTFPGRFWKSLRDGVLLCQLINAIKPGTISRINRAKAPFPQIENISNFLKACRALGVAEHSLFDPQDLYHKKDIGVVVQCLHALGATVQVTVPDHLGPHLGKKSS 366
A+ A WIE V G F F SL+DGV+LC L+N IKPG I RI + PF Q+EN+S F++ACR++GVAE LF+ DLY++K++G VVQC+HALG T+Q T+P++ GP LG K S
Sbjct: 291 AEEEAQEWIEAVLGEKFLASFGDSLKDGVMLCSLMNKIKPGLIPRIQTSSMPFKQMENVSAFVRACRSIGVAEFDLFETVDLYNQKNLGQVVQCIHALGRTIQKTMPEYNGPLLGVKES 409
BLAST of mRNA_S-ischiensis_contig11.2192.1 vs. uniprot
Match: W2NFZ0_PHYPR (Uncharacterized protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2NFZ0_PHYPR) HSP 1 Score: 133 bits (335), Expect = 1.650e-32 Identity = 64/119 (53.78%), Postives = 85/119 (71.43%), Query Frame = 1
Query: 10 AQVLAAFWIEGVTGMTFPGRFWKSLRDGVLLCQLINAIKPGTISRINRAKAPFPQIENISNFLKACRALGVAEHSLFDPQDLYHKKDIGVVVQCLHALGATVQVTVPDHLGPHLGKKSS 366
A+ A WIE V G F F SL+DGV+LC L+N IKPG I RI + PF Q+EN+S F++ACR++GVAE LF+ DLY++K++G VVQC+HALG T+Q T+P++ GP LG K S
Sbjct: 291 AEEEAQEWIEAVLGEKFLASFGDSLKDGVMLCSLMNKIKPGLIPRIQTSSMPFKQMENVSAFVRACRSIGVAEFDLFETVDLYNQKNLGQVVQCIHALGRTIQKTMPEYNGPLLGVKES 409 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2192.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig11.2192.1 >prot_S-ischiensis_contig11.2192.1 ID=prot_S-ischiensis_contig11.2192.1|Name=mRNA_S-ischiensis_contig11.2192.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=232bp QLDAQVLAAFWIEGVTGMTFPGRFWKSLRDGVLLCQLINAIKPGTISRINback to top mRNA from alignment at S-ischiensis_contig11:1907839..1908876- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig11.2192.1 ID=mRNA_S-ischiensis_contig11.2192.1|Name=mRNA_S-ischiensis_contig11.2192.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1038bp|location=Sequence derived from alignment at S-ischiensis_contig11:1907839..1908876- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig11:1907839..1908876- >mRNA_S-ischiensis_contig11.2192.1 ID=mRNA_S-ischiensis_contig11.2192.1|Name=mRNA_S-ischiensis_contig11.2192.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1392bp|location=Sequence derived from alignment at S-ischiensis_contig11:1907839..1908876- (Schizocladia ischiensis KU_0333)back to top |