mRNA_S-ischiensis_contig11.2186.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig11.2186.1
Unique NamemRNA_S-ischiensis_contig11.2186.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
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BLAST of mRNA_S-ischiensis_contig11.2186.1 vs. uniprot
Match: A0A835Z6D9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6D9_9STRA)

HSP 1 Score: 292 bits (747), Expect = 1.360e-92
Identity = 138/167 (82.63%), Postives = 151/167 (90.42%), Query Frame = 1 
Query:  325 RRMRRQGQDLVEAGLLNLDLLQSRRKKLRFGRSPIHAWGVFAEEPIAAGDMVLEYRGEIIRNPVADKRERLYEEMQIGSDYMFRVDEDTVVDATFKGSLARFVNHSCDPNCYTQIIAVDGQKKIVIYAKKGVAVGEELSYDYKFPLEDNPEDRVPCHCGVERCRGWM 825
            R MRRQGQ LV+AG L LD LQ+R+K LRFGRSPIHAWGVFAEEPIAAGDMV+EYRGEIIR+ VADKRERLY EMQ+GSDYMFRVDEDTVVDATFKGSLARFVNHSCDPNCYTQII VDG KKI+IYAK+ +A GEELSYDYKFPLE+  E+RVPCHCG  +CRG+M
Sbjct:    2 RSMRRQGQGLVDAGALRLDALQARKKLLRFGRSPIHAWGVFAEEPIAAGDMVIEYRGEIIRSAVADKRERLYTEMQVGSDYMFRVDEDTVVDATFKGSLARFVNHSCDPNCYTQIIVVDGVKKIIIYAKRAIATGEELSYDYKFPLEEKEEERVPCHCGAAKCRGYM 168
[Close]
BLAST of mRNA_S-ischiensis_contig11.2186.1 vs. uniprot
Match: D8LS62_ECTSI (Histone methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS62_ECTSI)

HSP 1 Score: 304 bits (778), Expect = 9.580e-86
Identity = 168/282 (59.57%), Postives = 196/282 (69.50%), Query Frame = 1 
Query:   70 GFRFLGDVDLESCARCRPYDGLKRRARKLHSPRGSRKRGGSGPEGSHXXXXXMSIGDAPPREAE-----------------------------AGLDVSLKDVSAKDRRQRLDQRRMRRQGQDLVEAGLLNLDLLQSRRKKLRFGRSPIHAWGVFAEEPIAAGDMVLEYRGEIIRNPVADKRERLYEEMQIGSDYMFRVDEDTVVDATFKGSLARFVNHSCDPNCYTQIIAVDGQKKIVIYAKKGVAVGEELSYDYKFPLEDNPEDRVPCHCGVERCRGWMN 828
            GF    +VDLES A+ RP D   +  R+  S  G   R  S P         MS  +AP    E                             + +  +LKDVS KDR QR+DQRRMRRQGQ LV+AGLLNLD+LQSRRKKLRFGRS +HAWGVFA+EPIAAGD+V+EYRGEII N VADKRE+ YE+MQIGSDYMFRVDEDTVVDATFKGSLARF+NHSCDP+C T+II V+G KKIVIYA++ VA+GEELSYDYKFP E +   RVPCHCG E+CRG++N
Sbjct: 1794 GFSSEKEVDLESSAKIRPVDSSSK-LRRRSSSFGGGVRNASRP-------LRMSSTEAPAAVGEDSSLSXXXXXXXXXXXXXXXXXXXXXXESSSVPTTLKDVSRKDRMQRMDQRRMRRQGQTLVDAGLLNLDVLQSRRKKLRFGRSSVHAWGVFADEPIAAGDLVIEYRGEIIGNAVADKREKQYEDMQIGSDYMFRVDEDTVVDATFKGSLARFINHSCDPSCTTRIITVEGSKKIVIYAERDVAMGEELSYDYKFPPEPDEAARVPCHCGSEKCRGFIN 2067
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BLAST of mRNA_S-ischiensis_contig11.2186.1 vs. uniprot
Match: A0A7S4IK64_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IK64_9EUKA)

HSP 1 Score: 216 bits (549), Expect = 3.240e-61
Identity = 95/160 (59.38%), Postives = 128/160 (80.00%), Query Frame = 1 
Query:  349 DLVEAGLLNLDLLQSRRKKLRFGRSPIHAWGVFAEEPIAAGDMVLEYRGEIIRNPVADKRERLYEEMQIGSDYMFRVDEDTVVDATFKGSLARFVNHSCDPNCYTQIIAVDGQKKIVIYAKKGVAVGEELSYDYKFPLEDNPEDRVPCHCGVERCRGWMN 828
            D  ++ L+  + L+ R+KKLRF +S IHAWG+FAEEPI   DMV+EY GEI+R  VAD RE++YE+M IGS Y+FR+D+DT++DAT  G+LARF+NHSCDPNCY +II V+G KKIVIY+K+ + V EE++YDYKFP+E   ED++PC CG ++CRG +N
Sbjct:  163 DTSDSDLMKFNQLKCRKKKLRFEKSSIHAWGLFAEEPIGPDDMVIEYIGEIVRQKVADNREKIYEQMGIGSSYLFRIDDDTIIDATKTGNLARFINHSCDPNCYAKIITVEGMKKIVIYSKREIKVNEEITYDYKFPIE---EDKIPCMCGTKKCRGSLN 319
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BLAST of mRNA_S-ischiensis_contig11.2186.1 vs. uniprot
Match: A0A6I9MSS3_9TELE (histone-lysine N-methyltransferase SETD1A-like n=22 Tax=Euteleostomi TaxID=117571 RepID=A0A6I9MSS3_9TELE)

HSP 1 Score: 201 bits (510), Expect = 7.290e-58
Identity = 91/148 (61.49%), Postives = 116/148 (78.38%), Query Frame = 1 
Query:  385 LQSRRKKLRFGRSPIHAWGVFAEEPIAAGDMVLEYRGEIIRNPVADKRERLYEEMQIGSDYMFRVDEDTVVDATFKGSLARFVNHSCDPNCYTQIIAVDGQKKIVIYAKKGVAVGEELSYDYKFPLEDNPEDRVPCHCGVERCRGWMN 828
            LQ R+K+LRFGRS IH WG+FA EPIAA +MV+EY G+ IR  VAD RE+ Y +  IGS Y+FRVD DT++DAT  G+LARF+NH C PNCY ++I ++ QKKIVIY+K+ +AV EE++YDYKFPLEDN   ++PC CG E CRG +N
Sbjct:    4 LQYRKKRLRFGRSRIHEWGLFAMEPIAADEMVIEYVGQNIRQMVADNREKRYAQQGIGSSYLFRVDHDTIIDATKVGNLARFINHCCTPNCYAKVITIESQKKIVIYSKQAIAVNEEITYDYKFPLEDN---KIPCLCGTENCRGTLN 148
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BLAST of mRNA_S-ischiensis_contig11.2186.1 vs. uniprot
Match: A0A484CMP6_PERFV (Uncharacterized protein n=1 Tax=Perca flavescens TaxID=8167 RepID=A0A484CMP6_PERFV)

HSP 1 Score: 203 bits (517), Expect = 2.630e-57
Identity = 92/159 (57.86%), Postives = 124/159 (77.99%), Query Frame = 1 
Query:  352 LVEAGLLNLDLLQSRRKKLRFGRSPIHAWGVFAEEPIAAGDMVLEYRGEIIRNPVADKRERLYEEMQIGSDYMFRVDEDTVVDATFKGSLARFVNHSCDPNCYTQIIAVDGQKKIVIYAKKGVAVGEELSYDYKFPLEDNPEDRVPCHCGVERCRGWMN 828
            ++++ LL L+ L+ R+K+LRFGRS IH WG+FA EPIAA +MV+EY G+ IR  VAD RE+ Y +  IGS Y+FRVD DT++DAT  G+LARF+NH C PNCY ++I ++ QKKIVIY+K+ +AV EE++YDYKFPLE+N   ++PC CG E CRG +N
Sbjct:  107 VMDSDLLKLNQLKYRKKRLRFGRSRIHEWGLFAMEPIAADEMVIEYVGQNIRQMVADNREKRYAQQGIGSSYLFRVDHDTIIDATKCGNLARFINHCCTPNCYAKVITIESQKKIVIYSKQAIAVNEEITYDYKFPLEEN---KIPCLCGTENCRGTLN 262
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BLAST of mRNA_S-ischiensis_contig11.2186.1 vs. uniprot
Match: A0A0D7B975_9AGAR (SET domain-containing protein n=1 Tax=Cylindrobasidium torrendii FP15055 ss-10 TaxID=1314674 RepID=A0A0D7B975_9AGAR)

HSP 1 Score: 199 bits (507), Expect = 2.670e-57
Identity = 87/159 (54.72%), Postives = 123/159 (77.36%), Query Frame = 1 
Query:  352 LVEAGLLNLDLLQSRRKKLRFGRSPIHAWGVFAEEPIAAGDMVLEYRGEIIRNPVADKRERLYEEMQIGSDYMFRVDEDTVVDATFKGSLARFVNHSCDPNCYTQIIAVDGQKKIVIYAKKGVAVGEELSYDYKFPLEDNPEDRVPCHCGVERCRGWMN 828
            + + G L  + LQSR+K L+F RS IH WG++AEE I+ G+MV+EY GE++R  VADKRER YE   IGS Y+FR+DE +VVDAT +G+L R +NHSCDPNC  +II + G+KKIVIYA++ + VG+E++YDY FP+E+  ++++PC CG  +CRG++N
Sbjct:    1 MADRGALKFNQLQSRKKSLKFSRSAIHDWGLYAEEGISKGEMVIEYVGEVVRGSVADKREREYERQGIGSSYLFRIDEASVVDATKRGNLGRLINHSCDPNCTAKIITISGEKKIVIYARREIGVGDEITYDYHFPIEE--DNKIPCLCGAVKCRGYLN 157
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BLAST of mRNA_S-ischiensis_contig11.2186.1 vs. uniprot
Match: A0A067PQ24_9AGAM (Histone-lysine N-methyltransferase, H3 lysine-4 specific (Fragment) n=1 Tax=Jaapia argillacea MUCL 33604 TaxID=933084 RepID=A0A067PQ24_9AGAM)

HSP 1 Score: 203 bits (516), Expect = 2.790e-57
Identity = 94/162 (58.02%), Postives = 122/162 (75.31%), Query Frame = 1 
Query:  343 GQDLVEAGLLNLDLLQSRRKKLRFGRSPIHAWGVFAEEPIAAGDMVLEYRGEIIRNPVADKRERLYEEMQIGSDYMFRVDEDTVVDATFKGSLARFVNHSCDPNCYTQIIAVDGQKKIVIYAKKGVAVGEELSYDYKFPLEDNPEDRVPCHCGVERCRGWMN 828
            GQ+      +  + LQSR+K+LRF RS IH WG+FA E IA GDMV+EY GEIIR P+ADKRE+ YE   IGS Y+FR+DED VVDAT KG+L R +NHSCDPNC  +II + G KKIVIYAK+ + +G+E++YDY FP+E   +D++PC CG  +CRG++N
Sbjct:   95 GQNAAAELTVKFNQLQSRKKQLRFARSHIHDWGLFAMERIAKGDMVIEYVGEIIRAPIADKREKAYERQGIGSSYLFRIDEDLVVDATKKGNLGRLINHSCDPNCTARIITITGDKKIVIYAKQDIELGDEVTYDYHFPIE---QDKIPCLCGSAKCRGYLN 253
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BLAST of mRNA_S-ischiensis_contig11.2186.1 vs. uniprot
Match: A0A1Z5K481_FISSO (Histone-lysine N-methyltransferase SETD1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K481_FISSO)

HSP 1 Score: 218 bits (554), Expect = 3.200e-57
Identity = 119/250 (47.60%), Postives = 157/250 (62.80%), Query Frame = 1 
Query:  103 SCARCRPYDG--LKRRARKLHS------PRGSRKRGGSGPEGSHXXXXXMSIGDAPPREAEAGLDVSLKDVSAKDRRQRLDQRRMRRQGQDLVEAGLLNLDLLQSRRKKLRFGRSPIHAWGVFAEEPIAAGDMVLEYRGEIIRNPVADKRERLYEEMQIGSDYMFRVDEDTVVDATFKGSLARFVNHSCDPNCYTQIIAVDGQKKIVIYAKKGVAVGEELSYDYKFPLEDNPEDRVPCHCGVERCRGWMN 828
            SCAR  PYD   +K+R   +H+      PR  R++                       + + G D+  ++ +   R  R +QRR+ +    +  +  LN+D L  R  +LRF RS IHAWGVFA+E IAAG+M+LEYRGEII N VA+KRE  YE   IGSDYMFR+D  TV DAT  G +ARF+N SC+PNCYT+II +DG K+IVIYAK+ +  GEEL YDYKFPLE + + R+PC+CG + CRG+MN
Sbjct:  624 SCARFTPYDRSRIKKREGFVHNETRKDKPRSLREK----------------------EDEKGGGDLEKEEKTTSGRAARANQRRVIKSVASIGSSTALNIDTLACREPQLRFDRSGIHAWGVFADEDIAAGEMILEYRGEIIGNSVAEKREVEYEAANIGSDYMFRIDATTVCDATKLGCVARFINASCEPNCYTKIITLDGSKRIVIYAKRNIRAGEELCYDYKFPLEFDEKKRIPCYCGAKDCRGYMN 851
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BLAST of mRNA_S-ischiensis_contig11.2186.1 vs. uniprot
Match: Q4G026_RAT (RGD1311624 protein (Fragment) n=3 Tax=Rattus TaxID=10114 RepID=Q4G026_RAT)

HSP 1 Score: 201 bits (512), Expect = 3.350e-57
Identity = 93/159 (58.49%), Postives = 123/159 (77.36%), Query Frame = 1 
Query:  352 LVEAGLLNLDLLQSRRKKLRFGRSPIHAWGVFAEEPIAAGDMVLEYRGEIIRNPVADKRERLYEEMQIGSDYMFRVDEDTVVDATFKGSLARFVNHSCDPNCYTQIIAVDGQKKIVIYAKKGVAVGEELSYDYKFPLEDNPEDRVPCHCGVERCRGWMN 828
            ++++ LL L+ L+ R+KKLRFGRS IH WG+FA EPIAA +MV+EY G+ IR  VAD RE+ Y +  IGS Y+FRVD DT++DAT  G+LARF+NH C PNCY ++I ++ QKKIVIY+K+ + V EE++YDYKFPLEDN   ++PC CG E CRG +N
Sbjct:   61 IMDSDLLKLNQLKFRKKKLRFGRSRIHEWGLFAMEPIAADEMVIEYVGQNIRQMVADMREKRYVQEGIGSSYLFRVDHDTIIDATKCGNLARFINHCCTPNCYAKVITIESQKKIVIYSKQPIGVDEEITYDYKFPLEDN---KIPCLCGTESCRGSLN 216
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BLAST of mRNA_S-ischiensis_contig11.2186.1 vs. uniprot
Match: A0A1Y2CSH6_9FUNG (SET domain-containing protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2CSH6_9FUNG)

HSP 1 Score: 199 bits (505), Expect = 3.530e-57
Identity = 91/148 (61.49%), Postives = 116/148 (78.38%), Query Frame = 1 
Query:  385 LQSRRKKLRFGRSPIHAWGVFAEEPIAAGDMVLEYRGEIIRNPVADKRERLYEEMQIGSDYMFRVDEDTVVDATFKGSLARFVNHSCDPNCYTQIIAVDGQKKIVIYAKKGVAVGEELSYDYKFPLEDNPEDRVPCHCGVERCRGWMN 828
            ++SR+ +LRF RS IH WG+FA EPIA  D+V+EY GE IR  VAD RE++YE+  IGS Y+FR+D+D ++DAT  G+LARF+NH CDPNC  +II VDGQKKIVIYA K VA GEE++YDYKFP+E   ED++PC CG   CRG++N
Sbjct:    1 MRSRKNRLRFARSKIHDWGLFALEPIAVDDIVIEYIGEQIRQKVADHREKIYEKSGIGSSYLFRIDDDNIIDATKAGNLARFINHCCDPNCNAKIITVDGQKKIVIYANKPVAEGEEVTYDYKFPIE---EDKIPCLCGATACRGFLN 145
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2186.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z6D9_9STRA1.360e-9282.63Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LS62_ECTSI9.580e-8659.57Histone methyltransferase n=2 Tax=Ectocarpus TaxID... [more]
A0A7S4IK64_9EUKA3.240e-6159.38Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A6I9MSS3_9TELE7.290e-5861.49histone-lysine N-methyltransferase SETD1A-like n=2... [more]
A0A484CMP6_PERFV2.630e-5757.86Uncharacterized protein n=1 Tax=Perca flavescens T... [more]
A0A0D7B975_9AGAR2.670e-5754.72SET domain-containing protein n=1 Tax=Cylindrobasi... [more]
A0A067PQ24_9AGAM2.790e-5758.02Histone-lysine N-methyltransferase, H3 lysine-4 sp... [more]
A0A1Z5K481_FISSO3.200e-5747.60Histone-lysine N-methyltransferase SETD1 n=1 Tax=F... [more]
Q4G026_RAT3.350e-5758.49RGD1311624 protein (Fragment) n=3 Tax=Rattus TaxID... [more]
A0A1Y2CSH6_9FUNG3.530e-5761.49SET domain-containing protein n=1 Tax=Rhizoclosmat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig11contigS-ischiensis_contig11:1881795..1885978 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score307.0
Seed ortholog evalue6.6e-81
Seed eggNOG ortholog2880.D8LS62
KEGG rclassRC00003,RC00060,RC00181,RC00496
KEGG koko:K11422
KEGG ReactionR03875,R03938,R04866,R04867
KEGG Pathwayko00310,map00310
EggNOG free text desc.SET domain
EggNOG OGsCOG2940@1,KOG1080@2759
EC2.1.1.43
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSET domain protein
Ec32 orthologEc-12_004700.1
Exons5
Model size1910
Cds size606
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815604.9410229-UTR-S-ischiensis_contig11:1881794..18828731622815604.9410229-UTR-S-ischiensis_contig11:1881794..1882873Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 1881795..1882873 -
1695739798.53143-UTR-S-ischiensis_contig11:1881794..18828731695739798.53143-UTR-S-ischiensis_contig11:1881794..1882873Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 1881795..1882873 -
1622815605.004627-UTR-S-ischiensis_contig11:1885239..18852711622815605.004627-UTR-S-ischiensis_contig11:1885239..1885271Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 1885240..1885271 -
1695739798.5764601-UTR-S-ischiensis_contig11:1885239..18852711695739798.5764601-UTR-S-ischiensis_contig11:1885239..1885271Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 1885240..1885271 -
1622815605.0194187-UTR-S-ischiensis_contig11:1885785..18859781622815605.0194187-UTR-S-ischiensis_contig11:1885785..1885978Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 1885786..1885978 -
1695739798.5873287-UTR-S-ischiensis_contig11:1885785..18859781695739798.5873287-UTR-S-ischiensis_contig11:1885785..1885978Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 1885786..1885978 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815604.9517307-CDS-S-ischiensis_contig11:1882873..18831521622815604.9517307-CDS-S-ischiensis_contig11:1882873..1883152Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1882874..1883152 -
1695739798.5419781-CDS-S-ischiensis_contig11:1882873..18831521695739798.5419781-CDS-S-ischiensis_contig11:1882873..1883152Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1882874..1883152 -
1622815604.9635313-CDS-S-ischiensis_contig11:1883760..18838211622815604.9635313-CDS-S-ischiensis_contig11:1883760..1883821Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1883761..1883821 -
1695739798.5503268-CDS-S-ischiensis_contig11:1883760..18838211695739798.5503268-CDS-S-ischiensis_contig11:1883760..1883821Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1883761..1883821 -
1622815604.9757588-CDS-S-ischiensis_contig11:1884734..18848901622815604.9757588-CDS-S-ischiensis_contig11:1884734..1884890Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1884735..1884890 -
1695739798.5586843-CDS-S-ischiensis_contig11:1884734..18848901695739798.5586843-CDS-S-ischiensis_contig11:1884734..1884890Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1884735..1884890 -
1622815604.9921494-CDS-S-ischiensis_contig11:1885129..18852391622815604.9921494-CDS-S-ischiensis_contig11:1885129..1885239Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1885130..1885239 -
1695739798.5670257-CDS-S-ischiensis_contig11:1885129..18852391695739798.5670257-CDS-S-ischiensis_contig11:1885129..1885239Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1885130..1885239 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig11.2186.1prot_S-ischiensis_contig11.2186.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig11 1882874..1885239 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig11.2186.1

>prot_S-ischiensis_contig11.2186.1 ID=prot_S-ischiensis_contig11.2186.1|Name=mRNA_S-ischiensis_contig11.2186.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=202bp
MSIGDAPPREAEAGLDVSLKDVSAKDRRQRLDQRRMRRQGQDLVEAGLLN
LDLLQSRRKKLRFGRSPIHAWGVFAEEPIAAGDMVLEYRGEIIRNPVADK
RERLYEEMQIGSDYMFRVDEDTVVDATFKGSLARFVNHSCDPNCYTQIIA
VDGQKKIVIYAKKGVAVGEELSYDYKFPLEDNPEDRVPCHCGVERCRGWM
N*
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mRNA from alignment at S-ischiensis_contig11:1881795..1885978-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig11.2186.1 ID=mRNA_S-ischiensis_contig11.2186.1|Name=mRNA_S-ischiensis_contig11.2186.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4184bp|location=Sequence derived from alignment at S-ischiensis_contig11:1881795..1885978- (Schizocladia ischiensis KU_0333)
GGGGCGGCGGCGGCGGCGCCGCCGCCCCGGGTGGTGGCGTTCTCGGACGC
GGCGGACGCCTTCCTACCGGGGTTTCGGTTCCTGGGGGACGTGGACCTGG
AGTCGTGCGCCAGGTGCCGGCCATATGACGGGCTCAAGCGGCGGGCGCGG
AAGCTGCACAGCCCTCGGGGGTCGCGCAAGCGCGGTGGGAGCGGTGAGGA
GGTGGTGTGTGTGTGGGTGTGTGGGGGGGTGCTTGTTTGTTGGGTGTGTG
TGGGGGTAATCCGCCCGTCTGCTAGGTGTAATTTAGCCGTTCTCAGGGTG
CACACTTTGTGCTCGCGGCGATGTCATGTGGTATTTGTTTTAGAGTTATG
CGATACGGTGGAAGGCGTTGTGTATGCTACAGTAGTGTAGTTCTGCTTCC
GGCAGTACCGCTGTACTCTACTACTCGTTTGCTCGGCCGCGTGTGCTGCA
ACCGTTCCTCCCCCCTTGCTCACAACAACAAGATCCTGCTGCACGCGCCC
CCCACCCAGCGCCATGATAACGATCGCATCCTGCTATGCATCCACTATCA
CCGCCACTGCCACCACCACCGCTCCAACTGAAGCCGCTGACTCACGACCG
GCGAAAATGCCGTCGCCGCCGCCACCCGCCACCCGCCACCTCCACCGACC
GCACCGCACCCCACCCGGCCTCGGACTTGACCGTCGCTGGCATCACTCCG
GCAGCAGGGCCCGAAGGCTCCCACCACCACCACCACCACATGTCCATCGG
CGACGCCCCCCCCCGTGAGGCTGAGGCGGGGCTGGACGTTTCCCTCAAGG
ACGTATCGGCCAAGGACCGGCGCCAGCGGCTTGATCAGCGGAGGATGCGG
TGGGTGCAGCGGTTGTGGCGCGTGCGCTGGTTTGTGCACGCGTGTGTGTG
CGCCCACGCTGGCGTACGGCCATGCCAGTGCATTCACCCCGTACTTCCAA
GCATGCGCTACCCCATACTTCCAAGCATATCTCTTGCCGCTGGGGTCCGT
ATAGTCACACTCGTAGGGAACTAGTGCGTAGGTCCAATTTGGCAGGGGTA
AAAGGGATATACTCATCATCACCACCCCCTCCCGGCAGGCGGCAAGGCCA
AGATCTGGTGGAGGCGGGGCTGCTCAACCTAGACCTGCTTCAGAGCCGGC
GCAAGAAGCTGCGCTTCGGGCGCTCCCCCATCCACGCCTGGGGTGTGTTT
GCCGAGGAGCCCATCGCCGCGGGCGACATGGTCCTGGAGTACAGGTGGGG
AGGGCCGTGGGCAAGGCGTGTGTGTACTTTTGTGTTGTGTGTGTGTGTGT
GTGTATGCTTGCACGTGTTGTACTTGGAATTGATTACGAGTACTAGTACT
ACTTTGGGGGTACTTCTCAAAGTATGTGTTTGTGCTCGTGTGTGCACGCG
TACACATGGGCTTTCCGCTTTTGTACGCAGGTGGGCCTTTTTCTCCCCGA
AAGTTGTGCTCCACCGCTTTGAGGCTTGCAACTTGGGGTTTGTTCAACGC
ACTCCCAAGACTTTTAAGCTTCTTTGAAGAACTTCAAAGTACGATACTAC
AGTGTACTTAGTACCTTGAAGGACTACAGTATGTTTGAGGTCTTCAGTGA
CGTGGCCCGTACCCCGCCCTGTGTTGGTCCTGTCAATACCACATTGTATG
CAGTGTCGTTCTTGATATCACCTGGTAAGGCGAGGCAGGGTTTAGTCCGT
GAAGTGCTGCGCACAGGGGGAGGAGAAGACTGCCGTGAGTTGCCGGTCAG
TGGCATGGGCAGGGCGGGTGATTCGTCCAGCATGAGCACGTTGTACATAC
TGTACTCGTACAGTACATGTACTTGTACTCGTACCTAAGTACTTTCGGTT
GTAAGTTGTTCTGGTAGTACTACAATTGTAGAGGGCTTTGATACTCATTT
CCTCTCCTAGTGTAGGTAACGATGCTCACTGGCAGGGTCCTCTCCCAGTG
TAAGAGGGTTGGCCCTTCACCCAACCGTGGCTCAATGCACCACCACTCGT
CCACCCGCCCCACCGCCGCCCGCCCCACTCTGCCTTTCTGTCGGTCGGCC
CACCTGCTTGCACGGCCATGTCTGTCTTGGCGATGCAAATGTGTGATATG
TGTGCGCGCGCGTGTGTGTGTGTGTGGCATTGGGGGGGGTTCGCTGTTCG
GCGGCAGGGGCGAGATCATCCGCAACCCTGTGGCGGACAAGCGCGAACGC
CTGTACGAGGAGATGCAGGTGCGTGGCCACTGCGCCTCTGCCGAGGGCTC
GCTTTGTATCTGATATTTGTGTGTCCCCGGTATGTGCTTACATGTCTGCA
TTCGAGTATTGGTGCCGTGGCAGTGATGGCGCATGTACGAGTACAGCGCT
TTGCTGATTACTTCCAAGCAAAGTAAACATCACTTGGCTTGCCCGAGCGG
GCTGCACGACACTCACAGCAGAGTAGACATCAAGCACTCCTACGTATTGT
GTGGCTTCCAAGTACAGGTAGACCATGTATACTCTGAGACTCCAGTACCC
CCAGTTATCCATGTCTGGATACCTCCAAGTATGCATGGTTACTGCTGCAA
GCACACGTGTCACGTGCACAATTTACTTCGAGGTACTATCCTACTACGGT
AGCAAATTTCCCCTGGCGAGCTATAAGGAAGGGCCACTGCTGAGGTCCTT
AGTGACGTGGCCCGCACCTCGCCCCGTGTTGTTCCTGTTTAACTTCAGAC
TACGGTTACGTACTGCTCAAGTCTTTGAGACTTGTATAGGCCAACTCCAC
GGGGCCTAAACTTTGCCGGCCCGCCCGCCCACCCGCCCGCCCTCCCGCCG
GTCGGCGCGCCTGCCCTTGGCTCCAGATCGGGAGCGACTACATGTTCCGC
GTGGACGAGGACACCGTGGTGGACGCCACCTTCAAGGGCAGCCTGGCACG
CTTTGTCAACCACAGCTGCGACCCCAACTGCTACACGCAGATCATCGCCG
TGGACGGCCAGAAGAAGATTGTCATCTACGCCAAGAAGGGCGTGGCCGTG
GGCGAGGAGCTCAGCTACGACTACAAGTTCCCGCTGGAGGACAACCCGGA
GGACCGTGTGCCCTGCCACTGCGGCGTCGAGCGCTGCCGCGGGTGGATGA
ACTGAATGAAGCTAGAAATCTGCGGAGATCCGTGCCACATCATGGTTGGG
CATTCCGATGATCCGTGTCCCCGAGAGGTCGCCGTTCACAGCGCTGCGAC
CTGCCCGACCCCGGGCCGAGTCTCGTGGTGCAGCTCAAGTGGGAATCACA
CACAAGCGTCAGGTCGGGGGGGCGCCCGGGCCCTCGGCCGGCGCCTGTGG
TCACGTTGGCGGTGGCGGCGGCAGTGTTGCAGTCGCAACCGGTCCACAGT
ATACATATCTGTTGTCACAAGAATACTCGAGCACATACATTTTCATCTGC
CCAGTGGGTGGCAGATGATGAGCACACGCTGTGACAGTCAGGCCCTGTGT
TAGTGTGCCCCGGGCATCATTTTATATATCATATGCTGACGGAGGACCGG
TGGCCCCAGTCCACGCTGCGCCAGACTGTGAACGACGCGGCCCGGGCTGG
CCCCAGGCCTCCACAACACTTTCTTGTGGTGGTGGCCGTGCAGGAGCTTC
CTAGAGTCCCCGGGCCGAGTCAGCCTGCGCCCCATGTCACAGGTAGATGT
TCTGTGGACATTTTTCAACGACATGTACCGACGTACTTCTATACTGGTAC
GTACTGTAGTAGAGTACCAGCTACTGACGAATTCTGATCATTTCTGATCG
ATGGGGGGGGTCACGGTGACGAACAACGCCTGCCATGGAAAGTCGCGGTA
CAGGTATTGCACACTGGCAAGTTTGCACCTATCCGCCCGGCCGGATACCA
CCCTCTTCTGACGGTCGTTACCTAGGCGGCCTAATATAGCGCCGATGCAG
CGGCCGAGTCCCAACACTTTGGCCCGGCGTGGTGCTCCGGCTGTGTACCG
CCGAGTCAGCCTGGCAGTTGCTCTGACAGTGCGTGGTTGCAAAGGCCGGT
ATTACTGTGGGCCGTCCGGTCTGATGTGTGCAACCCTGACGTGCTCTATG
GTCCTAGTAGAAGGACTGTGGTGACTGTACATACTAGACACCGTGGCACA
CGTCGTGCCTCCGAGTCCGGAGTCCCGGGCCCGGCCCGGCCCGAGGATAC
AATATAGTTCATACAATATATGATGTCACCTTGG
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Coding sequence (CDS) from alignment at S-ischiensis_contig11:1881795..1885978-

>mRNA_S-ischiensis_contig11.2186.1 ID=mRNA_S-ischiensis_contig11.2186.1|Name=mRNA_S-ischiensis_contig11.2186.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1212bp|location=Sequence derived from alignment at S-ischiensis_contig11:1881795..1885978- (Schizocladia ischiensis KU_0333)
ATGTCCATCGGCGACGCCCCCCCCCGTGAGGCTGAGGCGGGGCTGGACGT
TTCCCTCAAGGACGTATCGGCCAAGGACCGGCGCCAGCGGCTTGATCAGC
GGAGGATGCGATGTCCATCGGCGACGCCCCCCCCCGTGAGGCTGAGGCGG
GGCTGGACGTTTCCCTCAAGGACGTATCGGCCAAGGACCGGCGCCAGCGG
CTTGATCAGCGGAGGATGCGGCGGCAAGGCCAAGATCTGGTGGAGGCGGG
GCTGCTCAACCTAGACCTGCTTCAGAGCCGGCGCAAGAAGCTGCGCTTCG
GGCGCTCCCCCATCCACGCCTGGGGTGTGTTTGCCGAGGAGCCCATCGCC
GCGGGCGACATGGTCCTGGAGTACAGGCGGCAAGGCCAAGATCTGGTGGA
GGCGGGGCTGCTCAACCTAGACCTGCTTCAGAGCCGGCGCAAGAAGCTGC
GCTTCGGGCGCTCCCCCATCCACGCCTGGGGTGTGTTTGCCGAGGAGCCC
ATCGCCGCGGGCGACATGGTCCTGGAGTACAGGGGCGAGATCATCCGCAA
CCCTGTGGCGGACAAGCGCGAACGCCTGTACGAGGAGATGCAGGGGCGAG
ATCATCCGCAACCCTGTGGCGGACAAGCGCGAACGCCTGTACGAGGAGAT
GCAGATCGGGAGCGACTACATGTTCCGCGTGGACGAGGACACCGTGGTGG
ACGCCACCTTCAAGGGCAGCCTGGCACGCTTTGTCAACCACAGCTGCGAC
CCCAACTGCTACACGCAGATCATCGCCGTGGACGGCCAGAAGAAGATTGT
CATCTACGCCAAGAAGGGCGTGGCCGTGGGCGAGGAGCTCAGCTACGACT
ACAAGTTCCCGCTGGAGGACAACCCGGAGGACCGTGTGCCCTGCCACTGC
GGCGTCGAGCGCTGCCGCGGGTGGATGAACTGAATCGGGAGCGACTACAT
GTTCCGCGTGGACGAGGACACCGTGGTGGACGCCACCTTCAAGGGCAGCC
TGGCACGCTTTGTCAACCACAGCTGCGACCCCAACTGCTACACGCAGATC
ATCGCCGTGGACGGCCAGAAGAAGATTGTCATCTACGCCAAGAAGGGCGT
GGCCGTGGGCGAGGAGCTCAGCTACGACTACAAGTTCCCGCTGGAGGACA
ACCCGGAGGACCGTGTGCCCTGCCACTGCGGCGTCGAGCGCTGCCGCGGG
TGGATGAACTGA
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