mRNA_S-ischiensis_contig11.2160.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig11.2160.1
Unique NamemRNA_S-ischiensis_contig11.2160.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
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BLAST of mRNA_S-ischiensis_contig11.2160.1 vs. uniprot
Match: D8LHV3_ECTSI (Endonuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHV3_ECTSI)

HSP 1 Score: 215 bits (548), Expect = 8.450e-65
Identity = 111/193 (57.51%), Postives = 130/193 (67.36%), Query Frame = 1 
Query:  214 AVASPFLAPFVERYGLPDLDQVILPSREFTSCFDSRTRNPRWVVERVNRTTVGGAADRAKASFHAEGRLDPLFRSELRDYRGSGFDRGHLAPAADHKTSQGALEDTFSLMNMSPQVPDFNRHYWAEFEAFLRGLL-----SSEPAASPGTGTGARAGLGDRGRAGAPGRSPAASPQFRDVYVITGPLWLPHKE 777
            A AS F+ PFV+RYG PDLDQVILPS E+TSC+DSRTRN RWVVER+N  TV G  DR K+ F  + RL PLFRS L D+ GSG+DRGHLAPA DHKT+Q  L  TF L NM+PQVP FNR YW +FE F+R L+     S + AA+ G  T                 S + SP F+DVYVITGPL+LP KE
Sbjct:   11 APASAFIMPFVKRYGYPDLDQVILPSEEYTSCWDSRTRNARWVVERINLNTVSGPGDRKKSPFRPDSRLQPLFRSSLSDFYGSGYDRGHLAPAGDHKTTQANLTQTFLLSNMAPQVPSFNRGYWGDFEEFVRTLVVPSERSIKAAAAAGFST-----------------SSSLSPPFKDVYVITGPLFLPSKE 186
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BLAST of mRNA_S-ischiensis_contig11.2160.1 vs. uniprot
Match: A0A6H5JV63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV63_9PHAE)

HSP 1 Score: 212 bits (540), Expect = 6.400e-63
Identity = 109/193 (56.48%), Postives = 130/193 (67.36%), Query Frame = 1 
Query:  214 AVASPFLAPFVERYGLPDLDQVILPSREFTSCFDSRTRNPRWVVERVNRTTVGGAADRAKASFHAEGRLDPLFRSELRDYRGSGFDRGHLAPAADHKTSQGALEDTFSLMNMSPQVPDFNRHYWAEFEAFLRGLL-----SSEPAASPGTGTGARAGLGDRGRAGAPGRSPAASPQFRDVYVITGPLWLPHKE 777
            A AS F+ PFV+RYG PDLDQVILPS E+TSC+DSRTRN RWVVER+N  TV G  DR K+ F  + RL PLFRS L D+ GSG+DRGHLAPA +HKT+Q  L  TF L NM+PQ+P FNR YW +FE F+R L+     S + AA+ G  T                 S + SP F+DVYVITGPL+LP KE
Sbjct:   66 APASAFIMPFVKRYGYPDLDQVILPSEEYTSCWDSRTRNARWVVERINLNTVSGPGDRKKSPFRPDSRLQPLFRSSLSDFYGSGYDRGHLAPAGNHKTTQANLTQTFLLSNMAPQMPSFNRGYWGDFEEFVRTLVVPSERSIKAAAAAGFST-----------------SSSLSPPFKDVYVITGPLFLPSKE 241
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BLAST of mRNA_S-ischiensis_contig11.2160.1 vs. uniprot
Match: A0A835Z8T9_9STRA (Endonuclease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8T9_9STRA)

HSP 1 Score: 145 bits (366), Expect = 4.970e-38
Identity = 78/179 (43.58%), Postives = 103/179 (57.54%), Query Frame = 1 
Query:  232 LAPFVERYGLPDLDQVILPSREFTSCFDSRTRNPRWVVERVNRTTVGGAADRAKASFHAEGRLDPLFRSELRDYRGSGFDRGHLAPAADHKTSQGALEDTFSLMNMSPQVPDFNRHYWAEFEAFLRGLLSSEPAASPGTGTGARAGLGDRGRAGAPGRSPAASPQFRDVYVITGPLWLP 768
            LA +   +GLP     +L   E    +DSRTR PR+VVERV+ T++ G A R K  F  E  L+P FR+ LRD++G+G DRGHLA AA+HK  QGA++DTF + N++PQ+P FNR YW + E F+RGL                                  +PQF +VYVITGPL+LP
Sbjct:   16 LAHYAHTFGLPAAQDPLLSYTEHVVKWDSRTRTPRFVVERVSSTSIAGQAAR-KEQFKEETTLEPRFRNRLRDFKGTGLDRGHLAAAANHKDDQGAMDDTFVMSNVAPQLPAFNRGYWQQLERFVRGL----------------------------------APQFDNVYVITGPLYLP 159
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BLAST of mRNA_S-ischiensis_contig11.2160.1 vs. uniprot
Match: A0A7S0NAH1_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0NAH1_9CHLO)

HSP 1 Score: 143 bits (360), Expect = 1.240e-36
Identity = 74/173 (42.77%), Postives = 99/173 (57.23%), Query Frame = 1 
Query:  253 YGLPDLDQVILPSREFTSCFDSRTRNPRWVVERVNRTTVGGAADRAKASFHAEGRLDPLFRSELRDYRGSGFDRGHLAPAADHKTSQGALEDTFSLMNMSPQVPD-FNRHYWAEFEAFLRGLLSSEPAASPGTGTGARAGLGDRGRAGAPGRSPAASPQFRDVYVITGPLWLP 768
            YG P + +V+   + F + FD RTRNPR+V+E +   +V G  DR K+ F  +  +DP  R++L DYRGSG+DRGHLAPAA+HK  QGA++ TF+L N+SPQV + FNR YWA FE F++ L                                    +  DVYV+TGPLWLP
Sbjct:   47 YGAP-VSEVVRTFKGFVAAFDMRTRNPRYVIEHITADSVSGDGDRGKSDFVEDPAIDPAMRAKLTDYRGSGYDRGHLAPAANHKGDQGAMDQTFTLTNISPQVGEGFNRDYWARFEKFVKDLTR----------------------------------RADDVYVVTGPLWLP 184
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BLAST of mRNA_S-ischiensis_contig11.2160.1 vs. uniprot
Match: D8UF41_VOLCA (Endonuclease n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UF41_VOLCA)

HSP 1 Score: 134 bits (337), Expect = 6.440e-35
Identity = 67/174 (38.51%), Postives = 99/174 (56.90%), Query Frame = 1 
Query:  250 RYGLPDLDQVILPSREFTSCFDSRTRNPRWVVERVNRTTVGGAADRAKASFHAEGRLDPLFRSELRDYRGSGFDRGHLAPAADHKTSQGALEDTFSLMNMSPQV-PDFNRHYWAEFEAFLRGLLSSEPAASPGTGTGARAGLGDRGRAGAPGRSPAASPQFRDVYVITGPLWLP 768
            ++G P+ + +I     + + +D RTRNP+WV++ + R +  G A R  + F  +  +DP F ++L D+RGSG+DRGH+ PAADHK+SQ A+++TFSL+N+SPQV   FNR YWA FE F++ L  +                                    DVY++TGPLWLP
Sbjct:   48 KFGAPETE-IIRQYEGYVAAYDYRTRNPKWVLKHITRASSNGDAKREGSEFFPDPGIDPRFSAKLSDFRGSGYDRGHMTPAADHKSSQKAMDETFSLINISPQVGAGFNRDYWARFERFVKELTYAAA----------------------------------DVYIVTGPLWLP 186
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BLAST of mRNA_S-ischiensis_contig11.2160.1 vs. uniprot
Match: A0A835YH22_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YH22_9CHLO)

HSP 1 Score: 137 bits (346), Expect = 2.810e-34
Identity = 69/174 (39.66%), Postives = 99/174 (56.90%), Query Frame = 1 
Query:  250 RYGLPDLDQVILPSREFTSCFDSRTRNPRWVVERVNRTTVGGAADRAKASFHAEGRLDPLFRSELRDYRGSGFDRGHLAPAADHKTSQGALEDTFSLMNMSPQV-PDFNRHYWAEFEAFLRGLLSSEPAASPGTGTGARAGLGDRGRAGAPGRSPAASPQFRDVYVITGPLWLP 768
            ++GLP+ D ++ P   + + +D RTRNP+WV+E +   +  G A R ++ F  +  +DP F ++L D+RGSG+DRGH+APAA+HK SQ A+++TFSL+N+SPQ    FNR YWA FE F++ L                                       DVYV+TGPLWLP
Sbjct:   45 KHGLPETD-IVRPYEGYVAAYDYRTRNPKWVLEHITPASWSGEASRDRSEFFPDPGVDPRFSAQLSDFRGSGYDRGHMAPAANHKVSQKAMDETFSLVNISPQAGKGFNRDYWARFERFVKELTDVAG----------------------------------DVYVVTGPLWLP 183
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BLAST of mRNA_S-ischiensis_contig11.2160.1 vs. uniprot
Match: A0A7K4M4L4_9AVES (Endonuclease (Fragment) n=1 Tax=Crypturellus undulatus TaxID=48396 RepID=A0A7K4M4L4_9AVES)

HSP 1 Score: 129 bits (325), Expect = 5.130e-34
Identity = 76/193 (39.38%), Postives = 105/193 (54.40%), Query Frame = 1 
Query:  193 SAAMPAPAVASPFLAPFVERYGLPDLDQVILPSRE-FTSCFDSRTRNPRWVVERVNRTTVGGAADRAKASFHAEGRLDPLFRSELRDYRGSGFDRGHLAPAADHKTSQGALEDTFSLMNMSPQVPDFNRHYWAEFEAFLRGLLSSEPAASPGTGTGARAGLGDRGRAGAPGRSPAASPQFRDVYVITGPLWLP 768
            +AA+P P  A    +  + +YGLP L Q  L SRE +  C+D R+R+  WV+ER+NR T+ GA++RA   F  +G +    R+   DYRGSGFDRGHLA AA+HK SQ A++DTF L N++PQVP  N++ W   E + R L  +                                   ++VYV TGPL+LP
Sbjct:    4 AAALPPPQPAG---STELAKYGLPGLAQ--LRSRESYVLCYDPRSRSALWVIERLNRDTLSGASERASCDFQEDGSVHEYHRATNADYRGSGFDRGHLAAAANHKWSQKAMQDTFYLSNVAPQVPHLNQNAWNNLEKYSRSLARNN----------------------------------KNVYVCTGPLFLP 157
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BLAST of mRNA_S-ischiensis_contig11.2160.1 vs. uniprot
Match: A0A7S0RJH0_9CHLO (Endonuclease n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RJH0_9CHLO)

HSP 1 Score: 134 bits (338), Expect = 1.060e-33
Identity = 74/176 (42.05%), Postives = 101/176 (57.39%), Query Frame = 1 
Query:  250 RYGLPDLDQVILPSREFTSCFDSRTRNPRWVVERVNRTTVGGAADRAKASFHAEGRLDPLFRSELRDYRGSGFDRGHLAPAADHKTSQGALEDTFSLMNMSPQVPD-FNRHYWAEFEAFLRGLLSSEPAASPGTGTGARAGLGDRGRAGAPGRSPAASPQFRDVYVITGPLWLPHK 774
            +YGLP + Q +   ++F S FDSRTRNP+WV+ERVNR T  G  +RA + F  +  +    R+ L D++ SG+DRGHLAPAA+H+ SQ AL++TF+L N+SPQV + FNR YWA  E F+R L                                    +  DVYV+TGPL+LP +
Sbjct:   48 KYGLP-VGQNLRIYKQFVSSFDSRTRNPQWVLERVNRDTAFGEGNRADSKFIEDNAIPARLRNRLDDFKHSGYDRGHLAPAANHRGSQEALDETFTLSNISPQVGNGFNRAYWARVEKFVRDLTK----------------------------------ECSDVYVVTGPLYLPTR 188
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BLAST of mRNA_S-ischiensis_contig11.2160.1 vs. uniprot
Match: A0A8J4B6C2_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4B6C2_9CHLO)

HSP 1 Score: 137 bits (344), Expect = 1.460e-33
Identity = 69/174 (39.66%), Postives = 101/174 (58.05%), Query Frame = 1 
Query:  250 RYGLPDLDQVILPSREFTSCFDSRTRNPRWVVERVNRTTVGGAADRAKASFHAEGRLDPLFRSELRDYRGSGFDRGHLAPAADHKTSQGALEDTFSLMNMSPQV-PDFNRHYWAEFEAFLRGLLSSEPAASPGTGTGARAGLGDRGRAGAPGRSPAASPQFRDVYVITGPLWLP 768
            ++G P+ + ++     + + +D RTRNP+WV+E + +++  G A R    F  +  +DP F ++L D+RGSG+DRGH+APAADHK+SQ A+++TFSL+N+SPQV   FNR YWA FE F+R L ++                                    DVY+ITGPLWLP
Sbjct:  141 KFGAPETE-IVRQYEGYIAAYDYRTRNPKWVLEHITQSSSNGDAKRDGTDFFPDPGVDPRFSAKLSDFRGSGYDRGHMAPAADHKSSQKAMDETFSLINISPQVGAGFNRDYWARFERFVRELTNAAA----------------------------------DVYIITGPLWLP 279
[Close]
BLAST of mRNA_S-ischiensis_contig11.2160.1 vs. uniprot
Match: A0A7K8MZG4_CASCA (Endonuclease (Fragment) n=3 Tax=Casuariiformes TaxID=8784 RepID=A0A7K8MZG4_CASCA)

HSP 1 Score: 130 bits (326), Expect = 2.920e-33
Identity = 72/177 (40.68%), Postives = 97/177 (54.80%), Query Frame = 1 
Query:  250 RYGLPDLDQVILPSRE-FTSCFDSRTRNPRWVVERVNRTTVGGAADRAKASFHAEGRLDPLFRSELRDYRGSGFDRGHLAPAADHKTSQGALEDTFSLMNMSPQVPDFNRHYWAEFEAFLRGLLSSEPAASPGTGTGARAGLGDRGRAGAPGRSPAASPQFRDVYVITGPLWLPHKE 777
            +YGLP L Q  L SRE +  C+D R+R+  WV+ER+NR T+ GA+DRA   F  +G +    R+   DYRGSGFDRGHLA AA+H+ SQ A++DTF L N++PQVP  N++ W   E + R L  +                                   ++VYV TGPL+LP  E
Sbjct:    1 KYGLPGLAQ--LRSRESYVLCYDPRSRSALWVIERLNRDTLRGASDRAACDFQEDGSVHEYHRATNADYRGSGFDRGHLAAAANHRWSQKAMQDTFYLSNVAPQVPHLNQNAWNNLEKYSRSLARNN----------------------------------KNVYVCTGPLFLPRME 141
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2160.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHV3_ECTSI8.450e-6557.51Endonuclease n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5JV63_9PHAE6.400e-6356.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z8T9_9STRA4.970e-3843.58Endonuclease n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A7S0NAH1_9CHLO1.240e-3642.77Hypothetical protein (Fragment) n=1 Tax=Chlamydomo... [more]
D8UF41_VOLCA6.440e-3538.51Endonuclease n=1 Tax=Volvox carteri f. nagariensis... [more]
A0A835YH22_9CHLO2.810e-3439.66Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
A0A7K4M4L4_9AVES5.130e-3439.38Endonuclease (Fragment) n=1 Tax=Crypturellus undul... [more]
A0A7S0RJH0_9CHLO1.060e-3342.05Endonuclease n=1 Tax=Pyramimonas obovata TaxID=141... [more]
A0A8J4B6C2_9CHLO1.460e-3339.66Uncharacterized protein n=1 Tax=Volvox africanus T... [more]
A0A7K8MZG4_CASCA2.920e-3340.68Endonuclease (Fragment) n=3 Tax=Casuariiformes Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig11contigS-ischiensis_contig11:1697904..1702667 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score215.3
Seed ortholog evalue3.4e-53
Seed eggNOG ortholog2880.D8LHV3
Preferred nameNUC1
KEGG koko:K01173,ko:K08515
KEGG Pathwayko04130,ko04210,map04130,map04210
GOsGO:0000014,GO:0000737,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004521,GO:0004527,GO:0004529,GO:0004536,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006139,GO:0006259,GO:0006308,GO:0006309,GO:0006310,GO:0006401,GO:0006725,GO:0006807,GO:0006915,GO:0006921,GO:0008150,GO:0008152,GO:0008219,GO:0009056,GO:0009057,GO:0009987,GO:0012501,GO:0016020,GO:0016043,GO:0016070,GO:0016787,GO:0016788,GO:0019439,GO:0019866,GO:0022411,GO:0030262,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0034641,GO:0034655,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097194,GO:0140097,GO:0140098,GO:1901360,GO:1901361,GO:1901575
EggNOG free text desc.neuron death in response to oxidative stress
EggNOG OGsCOG1864@1,KOG3721@2759
Ec32 ortholog descriptionExtracellular Endonuclease, subunit A
Ec32 orthologEc-18_000610.1
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03029,ko04131,ko04147
Hectar predicted targeting categorysignal peptide
Exons6
Model size784
Cds size783
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig11.2160.1prot_S-ischiensis_contig11.2160.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig11 1697904..1702667 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815603.0037127-CDS-S-ischiensis_contig11:1697903..16981281622815603.0037127-CDS-S-ischiensis_contig11:1697903..1698128Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1697904..1698128 -
1695739797.3211083-CDS-S-ischiensis_contig11:1697903..16981281695739797.3211083-CDS-S-ischiensis_contig11:1697903..1698128Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1697904..1698128 -
1622815603.018233-CDS-S-ischiensis_contig11:1699221..16993861622815603.018233-CDS-S-ischiensis_contig11:1699221..1699386Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1699222..1699386 -
1695739797.3414385-CDS-S-ischiensis_contig11:1699221..16993861695739797.3414385-CDS-S-ischiensis_contig11:1699221..1699386Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1699222..1699386 -
1622815603.0331357-CDS-S-ischiensis_contig11:1700218..17003351622815603.0331357-CDS-S-ischiensis_contig11:1700218..1700335Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1700219..1700335 -
1695739797.3548512-CDS-S-ischiensis_contig11:1700218..17003351695739797.3548512-CDS-S-ischiensis_contig11:1700218..1700335Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1700219..1700335 -
1622815603.0480926-CDS-S-ischiensis_contig11:1701279..17014081622815603.0480926-CDS-S-ischiensis_contig11:1701279..1701408Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1701280..1701408 -
1695739797.3681087-CDS-S-ischiensis_contig11:1701279..17014081695739797.3681087-CDS-S-ischiensis_contig11:1701279..1701408Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1701280..1701408 -
1622815603.0636945-CDS-S-ischiensis_contig11:1702318..17023761622815603.0636945-CDS-S-ischiensis_contig11:1702318..1702376Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1702319..1702376 -
1695739797.3779712-CDS-S-ischiensis_contig11:1702318..17023761695739797.3779712-CDS-S-ischiensis_contig11:1702318..1702376Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1702319..1702376 -
1622815603.0781596-CDS-S-ischiensis_contig11:1702578..17026671622815603.0781596-CDS-S-ischiensis_contig11:1702578..1702667Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1702579..1702667 -
1695739797.3895597-CDS-S-ischiensis_contig11:1702578..17026671695739797.3895597-CDS-S-ischiensis_contig11:1702578..1702667Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1702579..1702667 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig11.2160.1

>prot_S-ischiensis_contig11.2160.1 ID=prot_S-ischiensis_contig11.2160.1|Name=mRNA_S-ischiensis_contig11.2160.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=261bp
MGLGSVASLAASAAVGAAAGAIAATYCVTRQRDKERGEGKATETPRAAPA
PWLPPRDKGFPSEVSAAMPAPAVASPFLAPFVERYGLPDLDQVILPSREF
TSCFDSRTRNPRWVVERVNRTTVGGAADRAKASFHAEGRLDPLFRSELRD
YRGSGFDRGHLAPAADHKTSQGALEDTFSLMNMSPQVPDFNRHYWAEFEA
FLRGLLSSEPAASPGTGTGARAGLGDRGRAGAPGRSPAASPQFRDVYVIT
GPLWLPHKEWV
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mRNA from alignment at S-ischiensis_contig11:1697904..1702667-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig11.2160.1 ID=mRNA_S-ischiensis_contig11.2160.1|Name=mRNA_S-ischiensis_contig11.2160.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4764bp|location=Sequence derived from alignment at S-ischiensis_contig11:1697904..1702667- (Schizocladia ischiensis KU_0333)
ATGGGCCTCGGGAGTGTCGCCAGTTTAGCCGCCTCTGCAGCGGTGGGTGC
TGCTGCAGGAGCAATTGCGGCTACATACTGTGTCACAAGGTGCGGCCATG
TCCCTCGCTGAGGGCACCCTCGTTTCCTTGTGTACTCACCACCAGAACGT
AGCGCATCTGCTGCTGATACAACAGGCCAAGAAGCCCACGAACACACACA
CGCACGCACACACATTCGCACAACCAATACGCGCGCGCACGCACGCACGC
ATACATGCATGCACGCACGCAAACGTCTCTTGGTCGAGCAGGCAGCGGGA
TAAGGAGAGAGGGGAGGGCAAAGCAACTGAAACACCCCGAGCAGCCCCGG
TGAGCAAGCTTCACGTGGTTTTAGACAGTCCTCAAAGCTGCGAATGAGGT
GGGCTGACTGCAATGCATGCAAAGCTGCAGCCGTGCTGTTGCTGTGCGCT
GGGTGGATTGGCGCAAAGGTCGGCCCTCATGCTGCGGCCTCGGGAGTGCT
GCGATTGCCAAGAAACTCGGACCCCGAGAATTGTCCATTGTGACGACAGG
GACAAGATGCGTCTGCAGTCAGCCCGTGTTGTGCTTCATGGGGGGGTGGG
GGGGTCGGGACATCGCCGCTGCTCTCCTCTTCTTCCCCCCATCCACGCAC
ACACCCCAGACTGTTGCCTTGCAGTGCACGCGAGCACTGCATATACTCGA
CTACTCTACCTGTACATGCAGAGGGCTACCATTGCGTACTGCACTTGTTC
AGGCGGGTCCTGCCAGGGTGTCAGTGTCTACTTGTACAGTACTTCGCAGT
ACCCAAGTACTCTACAGCAGGTATTCAAGTGCTCCTGCAGTGTCAGTTGG
AAGTAAGCCAAGAGAGGTGTAACTGCAGTAGCTCCCCGTGTTGTACTTGG
GAGCGCTCTTTGCGGTACTGCGGTAAGGCGGTTGCTACCGCATGTACTGT
ACCGTACCGCGGTCATGGTCTCGGGACTACTACGGCAAGCACAGCATGAG
TACTAGCAGTCGAGTACATGTATACCCATACTTCGAAGTACCACACAGGG
GCACTGAAAAACGGCCGTTCGTGTGCTGCACAGCGCAGTGTAGCCACTCT
TGTTGCTGGCTTCGAAACACTTCTCGGTGCGCGTCTCCAAGCAAGTGACC
CAAGTGCAGCACCCCAACTAGGACGACCATGCTACGCCCCTTCCTCCCCC
ACGCCCCTTGCCCCCATCACACGCGTCCAACGCCGCCACCGCCGCCGCAA
AGGGAGCAGGCGCCATGGTTGCCCCCACGGGACAAGGGCTTTCCGTCGGA
GGTCTCCGCGGCGATGCCGGCGCCGGCGGTCGCGTCGCCGTTTTTGGCGC
CTTTTGTGGAGCGTTATGGCCTCCCGGACCTGGACCAAGTGAGAAATGCC
AGCCGGTGTGATGTGGTGTCGAGCTGCAGCACTTCAAAGTACATTGGAGT
ATTGTAGAGTACGCACCGCATCATAGTGCTGATTATAGCTGATTGCTTAC
AAGAACAATCAATCTCACACACGTGCGATTGTACCTCGCTACAGTTTACT
TCGTATATGAATCACCTGATTGCTTAAACCTTGGGGATGGCGGTAGGGGG
GACTGCACCGGTCCTCGCCGAGCTCCTGTCGGCTACTCCAGTGGCCAAGT
AGTAGTGTGCCGGCATTGCTGCAAGGGTTGCACTCGAGTACTCAAATAGT
AAGGCCAATAGGCAATGCCGGTGCGCCGCTGTAGGTTCGGTGCTGCGAAC
ATCCAAGTTCGAAGTGTGTACGAGTGCAAGTACGAGTACAGCAGTACTGC
ACCCGAGTACAGCACGCCTCCTCAGTGAATCGTGCTCGATTTGTTCGACA
ACGCAAAGCGCTGAAGCGCTGTATTTGACTGCATCGCGTTAGTCGATGCC
TCCTGGTAGGCCGAGCGAGGCTCACTTCTGCAGGTACTTCCAAGTAGTAG
AGCGCTCGATGCCCGAAACAGCCCCGTGTGATCCTGGGGAGTTCATGTCG
TGCTTCGGCGCGCGCAAGACTGCACTGTGTTGAAGCAGCTACACTCGATT
GCTTAACTCTCCGTCTCCCTAACTACTCAGAGTACTGCAGTGCATATACT
CACGTTGTGCTTGCCGTAGTCCAGATACCGTTGGCCACACGCCCTTTGAC
GGCATATATATATATATATGTATGTATGTGCTCATGCTGTGCTTGCCATA
GTCCCGAGACTATTGACCAGTACTATGGTAGTAGTACTCCTGCAGTACTC
TGTTAGCCACTGGGACATATGGCACTTGAGAAACGGTACTTAAATATGTT
GTAAGTTTATCTGATTGCCAAAACGGCCCCAGGTGATCCTGCCCTCGCGG
GAGTTCACGTCCTGCTTCGACTCGCGCACCCGCAACCCCCGCTGGGTGGT
GGAGCGCGTCAACCGGACCACTGTGGGGGGCGCAGCTGACCGTGCCAAGG
TGAGTACTAGCAAGGGCTTTGCCAATGAACGGTGGTGGTGCGGCGGTTGG
GTGGTGGTGGTGGTGATGGCGGTGGTGGTGGTGGTGGTGGTGGTGGTGGT
GGTGGTGGCGGTCCTTGTGGTTGTTGTGGTGGTGGTGGTGGTGGTGGTGG
TGTGGGGGCAGTGGCTTTGGGGCTTTGGTGGAGTGCTGTACTCGTAAGTA
GAAGGTACTGACAGTACAACCCCCCTCCCCACTAACACACTCTCTGTGTT
GCCCGTAGCAACAAAGAACGGCGAGGCTGGCAGTAGCAACCCCCCAATAC
ACACATCTACCAAAGCACGGCAAAGCTGGCCGTAGCCAGCCTCCCCTTTG
GAAGAGGAAACAGGGGCCAGTCCCACAGGGTCTCCCCTGTGGTGTAATGT
GATGTGCTTGCGAACTAGAGAAGTACTTCAGAGTGCATATCACATCACAT
CACATACAGTGTCTCCGCTGTGGGACACGTGGCCAACGGCTGCACAGCTC
TACAGCACGCAACTCGCTAGCCCCCCCCACCTGCTCGGAGGAAAGGATTG
TTGCGATATATGTAACGTGGGGCGAGCTGATACTCGATTGCGTGCTCTGA
ACGCTGTAGTTTGTCATCACACCACATTGTGTGTGTGTGAGAACTGCTTT
GACCTCCTCCTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCCCCTCCTCCT
CCTCCTCTCTCCCCCGTACTCGTCTCTGAGCACTGATTTGGAGCAAAGGA
ACCTTCCCTGCCGAGACCCTTCGCATTGCAGTGAGACATAGTCCGCACCT
CGCTCATTTCGATTCTCTAACTATGTGACAGGCTTCGTTCCATGCCGAGG
GCCGGCTAGACCCCCTCTTCCGAAGCGAGCTCAGGGACTATAGGGGCAGC
GGATTTGACCGGGGGCACCTGGCCCCAGCCGCGGACCACAAGACCTCCCA
GGGGGCGCTGGAGGACACCTTCTCGCTCATGAACATGAGCCCACAGGTAG
GGCTGGCGGCTGTTGTGACGCAATGTGATGCCTGTACTTCGAAGTATTAT
CAGTGTGCAGTAGACGATACACTGACTGACGTGCAGTCCACACCAGTAGT
GACCTCGGCAGTGGGCCTCTGTCTCCCCCGCCCCCCCCCCCCACCCCACC
CCCCTCTCGCTCTCCCTCTCTCTCTTTCTGTCTCTGTCGCTCTCTCTCTG
TCCATCAATCAGAGGGGCGAGGAGTGGGACGGTCTGTAATGTGGTCACAG
AGTGACCATGCACTACTGTCATGTGTATTTCATGTGGTGGATAAGGTGCC
ACCTGGCCGTGGCGAAGGGGTGACTTGGCTACGAAGTGACAGCAAGTTTG
CTTCAAATTAGGTACTGTGCTCGTACTGAAACTGTAGCGAAGTAGCTATC
ATGTTGCTTGATGAGTGGCTACCTGACACTGTGCTCGGGTACCTTAGTTG
TGGAGGGGACTACTAGTATGTGTGTAGCATACAGCTGCAATGTACTGCAT
TGAAACTCGAGTACTTTGAAGCACTGCAATTTCTTGATGGGTTGGCCACC
TGACACGCTGCAAGTGGTGCTGTAGGATGGAACACTGCTTGGCGCAACAG
AAACAATTGTACTTTGGGAACAACTCTAGAAGAGAAACTGCTGTAGGATG
GAGCACTGCTTGGCGCAACGGAAACAATTTTACTTCGGAAAACAACTACT
AGAGGTGAAACCCAGAAGAACAGCACGGCAGCACAGCACGAGAGCTGGAA
GGCGCCACGGCAGGAGCCTCAGGCCTCCAGGGCACGTGGCGTGATGTGAT
GTGACGCGAGGCGTACTCTCAAGTACTTTGTATGAACAGGAACAACACAG
GGCGGGGTGCAGGCCACGTCACTAAAGACCTCAGCAGTGGCCCTCCCTTG
TAGCTCGCCAGGGGAAATTTGTGTGGGGAAGAGGAGAATAGGAGGAGGGG
GAGGTGGGCGGGGAAGTACTTGGCAGTACAGTACTTTGACATCACGTCGC
TGGCACAACACCAGCTCACCGATTTCTCACCCCGCCCTCACCTCCGCCCC
CTGGCCCATCATCGGACCTGGCGGCCGCCCTGCAAGCAGGTCCCCGACTT
CAATCGACATTACTGGGCCGAATTCGAGGCCTTCTTGCGCGGCCTCCTCT
CCAGCGAGCCCGCCGCCAGTCCCGGGACCGGCACCGGCGCCAGGGCTGGG
CTCGGGGACAGGGGCAGGGCCGGGGCCCCGGGGAGGTCTCCGGCCGCCTC
ACCCCAGTTCCGCGACGTGTATGTCATAACGGGGCCCTTGTGGCTCCCGC
ACAAGGAGTGGGTT
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Coding sequence (CDS) from alignment at S-ischiensis_contig11:1697904..1702667-

>mRNA_S-ischiensis_contig11.2160.1 ID=mRNA_S-ischiensis_contig11.2160.1|Name=mRNA_S-ischiensis_contig11.2160.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1566bp|location=Sequence derived from alignment at S-ischiensis_contig11:1697904..1702667- (Schizocladia ischiensis KU_0333)
ATGGGCCTCGGGAGTGTCGCCAGTTTAGCCGCCTCTGCAGCGGTGGGTGC
TGCTGCAGGAGCAATTGCGGCTACATACTGTGTCACAAGATGGGCCTCGG
GAGTGTCGCCAGTTTAGCCGCCTCTGCAGCGGTGGGTGCTGCTGCAGGAG
CAATTGCGGCTACATACTGTGTCACAAGGCAGCGGGATAAGGAGAGAGGG
GAGGGCAAAGCAACTGAAACACCCCGAGCAGCCCCGGCAGCGGGATAAGG
AGAGAGGGGAGGGCAAAGCAACTGAAACACCCCGAGCAGCCCCGGCGCCA
TGGTTGCCCCCACGGGACAAGGGCTTTCCGTCGGAGGTCTCCGCGGCGAT
GCCGGCGCCGGCGGTCGCGTCGCCGTTTTTGGCGCCTTTTGTGGAGCGTT
ATGGCCTCCCGGACCTGGACCAAGCGCCATGGTTGCCCCCACGGGACAAG
GGCTTTCCGTCGGAGGTCTCCGCGGCGATGCCGGCGCCGGCGGTCGCGTC
GCCGTTTTTGGCGCCTTTTGTGGAGCGTTATGGCCTCCCGGACCTGGACC
AAGTGATCCTGCCCTCGCGGGAGTTCACGTCCTGCTTCGACTCGCGCACC
CGCAACCCCCGCTGGGTGGTGGAGCGCGTCAACCGGACCACTGTGGGGGG
CGCAGCTGACCGTGCCAAGGTGATCCTGCCCTCGCGGGAGTTCACGTCCT
GCTTCGACTCGCGCACCCGCAACCCCCGCTGGGTGGTGGAGCGCGTCAAC
CGGACCACTGTGGGGGGCGCAGCTGACCGTGCCAAGGCTTCGTTCCATGC
CGAGGGCCGGCTAGACCCCCTCTTCCGAAGCGAGCTCAGGGACTATAGGG
GCAGCGGATTTGACCGGGGGCACCTGGCCCCAGCCGCGGACCACAAGACC
TCCCAGGGGGCGCTGGAGGACACCTTCTCGCTCATGAACATGAGCCCACA
GGCTTCGTTCCATGCCGAGGGCCGGCTAGACCCCCTCTTCCGAAGCGAGC
TCAGGGACTATAGGGGCAGCGGATTTGACCGGGGGCACCTGGCCCCAGCC
GCGGACCACAAGACCTCCCAGGGGGCGCTGGAGGACACCTTCTCGCTCAT
GAACATGAGCCCACAGGTCCCCGACTTCAATCGACATTACTGGGCCGAAT
TCGAGGCCTTCTTGCGCGGCCTCCTCTCCAGCGAGCCCGCCGCCAGTCCC
GGGACCGGCACCGGCGCCAGGGCTGGGCTCGGGGACAGGGGCAGGGCCGG
GGCCCCGGGGAGGTCTCCGGCCGCCTCACCCCAGTTCCGCGACGTGTATG
TCATAACGGGGCCCTTGTGGCTCCCGCACAAGGAGTGGGTTGTCCCCGAC
TTCAATCGACATTACTGGGCCGAATTCGAGGCCTTCTTGCGCGGCCTCCT
CTCCAGCGAGCCCGCCGCCAGTCCCGGGACCGGCACCGGCGCCAGGGCTG
GGCTCGGGGACAGGGGCAGGGCCGGGGCCCCGGGGAGGTCTCCGGCCGCC
TCACCCCAGTTCCGCGACGTGTATGTCATAACGGGGCCCTTGTGGCTCCC
GCACAAGGAGTGGGTT
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