mRNA_S-ischiensis_contig11.2129.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig11.2129.1 vs. uniprot
Match: D7FPH1_ECTSI (Formin-like 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPH1_ECTSI) HSP 1 Score: 160 bits (405), Expect = 3.760e-41 Identity = 85/155 (54.84%), Postives = 115/155 (74.19%), Query Frame = 1
Query: 28 EEIELEEELVHCLMILLNKEEGLSLLEQSPDLVPLLALSAHDSESDYVRRSVLTLMTVVAATGPEGYEAVIRAVDHVKLDKEEMYRFTLLVQSLADPDPGSSGLPLKLDTMVFLNTVLSSAFEYEERCSLRRDMLMAGITDSIVAMRDEYRLPQD 492
EE++LEEELV C+MILLNK +GL LE S DL+PLLA SA DS S+YVR ++L L+T+V +GP G+E V A+DHVK+DK+E RF LLV++ D D SSG+ L D +VF NT+LSSAFE+EER LR +M+ AG+ +++ +RD + L +D
Sbjct: 166 EEVKLEEELVRCVMILLNKPQGLMTLEASSDLLPLLARSAIDSCSNYVRCNLLKLLTIVTESGPSGFETVTNALDHVKVDKDEDLRFALLVEAFGDAD--SSGVALITDLVVFFNTILSSAFEFEERVMLRTEMISAGMLEAMQRVRDYFGLSKD 318
BLAST of mRNA_S-ischiensis_contig11.2129.1 vs. uniprot
Match: A0A6H5JDW8_9PHAE (FH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDW8_9PHAE) HSP 1 Score: 121 bits (304), Expect = 1.150e-27 Identity = 68/151 (45.03%), Postives = 95/151 (62.91%), Query Frame = 1
Query: 25 PEEIELEEELVHCLMILLNKEEGLSLLEQSPDLVPLLALSAHDSESDYVRRSVLTLMTVVAATGPEGYEAVIRAVDHVKLDKEEMYRFTLLVQSLADPDPGSSGLPLKLDTMVFLNTVLSSAFEYEERCSLRRDMLMAGITDSIVAMRDEY 477
PEE++LEE +V CLM+L NKE GLS LE S L P++ SA DS S+ VR S+L ++TV+ TG +G + V+ A+D K K + RF+LL + + G L L L VFLNTVLS AF++EER LR +M+ G+ +I R+ +
Sbjct: 154 PEEVKLEEGVVQCLMVLFNKETGLSNLEGSSTLWPVIVRSALDSTSERVRSSLLKVLTVMTETGQDGLKVVLNALDVAKARKNQDLRFSLLPGIIVGGNDGEEDLRLALAVAVFLNTVLSRAFKFEERVLLRGEMVAGGVVAAIAGARERW 304
BLAST of mRNA_S-ischiensis_contig11.2129.1 vs. uniprot
Match: A0A835Z2Y1_9STRA (FH2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Y1_9STRA) HSP 1 Score: 113 bits (283), Expect = 6.730e-25 Identity = 70/167 (41.92%), Postives = 111/167 (66.47%), Query Frame = 1
Query: 37 ELEEELVHCLMILLNKE--EGLSLLEQSPDLVPLLALSAHDSESDYVRRSVLTLMTVVAATGPEGYEAVIRAVDHVKLDKEEMYRFTLLVQSLADPDPGSSGLPLKLDTMVFLNTVLSSAFEYEERCSLRRDMLMAGITDSIVAMRDEY-RLPQDAGDGDTDVDSEV 528
E+E LVHCLM+LLN EG++ + S L+P++A S S YVR S + LMTVVA G +G + V++A+DHV+L++++ RF LV +L++ D G+ +K+DTMV LNT+LSS + +ER LR +M AG+ D++ A++++Y ++ DAG + + +S V
Sbjct: 135 EVEVNLVHCLMLLLNGGGLEGVAEVTASAALLPVVANCTTTSPSAYVRGSGMRLMTVVAGGGSKGRDQVLKALDHVRLERDDPCRFVTLVDTLSEED---LGVDVKVDTMVLLNTILSSD-DIDERVGLRAEMCDAGVLDALEAIKEKYGQVHLDAGSEEAEWESLV 297
BLAST of mRNA_S-ischiensis_contig11.2129.1 vs. uniprot
Match: D8LCH4_ECTSI (FH2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCH4_ECTSI) HSP 1 Score: 113 bits (283), Expect = 7.050e-25 Identity = 76/195 (38.97%), Postives = 102/195 (52.31%), Query Frame = 1
Query: 16 GPSPEEIELEEELVHCLMILLNKEEGLSLLEQSPDLVPLLALSAHDSESDYVRRSVLTLMTVVAATGPEGYEAVIRAVDHVKLDKEEMYRFTLLVQSLA----------------DPDPGSSG-------------------------LPLKLDTMVFLNTVLSSAFEYEERCSLRRDMLMAGITDSIVAMRDEY 477
G PEE+ELEE +V CLM+L NKE GLS LE S +L P++ SA DS S+ VR S+L ++TV+ TG +G + V+ A+D K K + RF+LLV +L+ P GSS L L L VFLNTVLS AFE+EER LR +M+ G+ +I R+ +
Sbjct: 118 GVPPEEVELEEGVVRCLMVLFNKETGLSNLEGSSNLWPVIVRSALDSTSERVRSSLLKVLTVMTETGQDGLKVVLNALDVAKAQKNQDLRFSLLVGALSKAAXXXXXXXXXXRGTQPGSGSSEEEGYGVGGTQPGIRGGGNDGEEDGHLRLALAVAVFLNTVLSRAFEFEERVLLRGEMVAGGVVAAIAGARERW 312
BLAST of mRNA_S-ischiensis_contig11.2129.1 vs. uniprot
Match: D7FR06_ECTSI (Formin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR06_ECTSI) HSP 1 Score: 97.4 bits (241), Expect = 2.330e-19 Identity = 53/148 (35.81%), Postives = 90/148 (60.81%), Query Frame = 1
Query: 31 EIELEEELVHCLMILLNKEEGLSLLEQSPDLVPLLALSAHDSESDYVRRSVLTLMTVVAATGPEGYEAVIRAVDHVKLDKEEMYRFTLLVQSLADPDPGSSGLPLKLDTMVFLNTVLSSAFEYEERCSLRRDMLMAGITDSIVAMRDE 474
+++L+ EL+ CL LN + G+ L P++V +LAL+ SE ++ L L+ V+ GPEGY AV+ A+D+ KL K E RF L+ +L + + L K D M+F+NT+++SA + EER +R D++ GI D++ ++++
Sbjct: 51 DVQLQVELLKCLKASLNNQLGIDFLAARPEVVGILALN-FGSEDVFICTQALELLAVLMVDGPEGYRAVLAAMDYFKLVKGERVRFYSLLDALMTDE---ADLAFKRDVMLFINTLVNSAMDIEERIEIRADLIYTGILDAVERLKNQ 194
BLAST of mRNA_S-ischiensis_contig11.2129.1 vs. uniprot
Match: A0A6H5L634_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L634_9PHAE) HSP 1 Score: 97.4 bits (241), Expect = 2.550e-19 Identity = 53/148 (35.81%), Postives = 90/148 (60.81%), Query Frame = 1
Query: 31 EIELEEELVHCLMILLNKEEGLSLLEQSPDLVPLLALSAHDSESDYVRRSVLTLMTVVAATGPEGYEAVIRAVDHVKLDKEEMYRFTLLVQSLADPDPGSSGLPLKLDTMVFLNTVLSSAFEYEERCSLRRDMLMAGITDSIVAMRDE 474
+++L+ EL+ CL LN + G+ L P++V +LAL+ SE ++ L L+ V+ GPEGY AV+ A+D+ KL K E RF L+ +L + + L K D M+F+NT+++SA + EER +R D++ GI D++ ++++
Sbjct: 200 DVQLQVELLKCLKASLNNQLGIDFLAARPEVVGILALN-FGSEDVFICTQALELLAVLMVDGPEGYRAVLAAMDYFKLVKGERVRFYSLLDALMTDE---ADLAFKRDVMLFINTLVNSAMDIEERIEIRADLIYTGILDAVERLKNQ 343
BLAST of mRNA_S-ischiensis_contig11.2129.1 vs. uniprot
Match: A0A835ZCJ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCJ0_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 3.660e-16 Identity = 53/167 (31.74%), Postives = 91/167 (54.49%), Query Frame = 1
Query: 28 EEIELEEELVHCLMILLNKEEGLSLLEQSPDLVPLLALSAHDSESDYVRRSVLTLMTVVAATGPEGYEAVIRAVDHVKLDKEEMYRFTLL------------------VQSLADPDPGSSGLPLKLDTMVFLNTVLSSAFEYEERCSLRRDMLMAGITDSIVAMRDE 474
E++ ++ EL+ CL LN + G+ L P++V +LAL+ SE ++ L L+ V+ GPEGY AV+ ++D+ KL K E RF L V +L D + + + K D M+F+NT+++SA + EER +R D++ GI D++ ++++
Sbjct: 110 EDVRIQVELLKCLKASLNNQLGIDFLAARPEVVGILALN-FGSEDTFICTQTLELLAVLMVDGPEGYRAVLASMDYFKLVKGERVRFYSLLLYPLPLAVLALSELVSAVDALMDDE---TPISFKRDVMLFINTLVNSAMDIEERIEIRADLVYTGILDAVERLKNQ 272
BLAST of mRNA_S-ischiensis_contig11.2129.1 vs. uniprot
Match: UPI001390227B (LOW QUALITY PROTEIN: inverted formin-2 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI001390227B) HSP 1 Score: 75.5 bits (184), Expect = 8.090e-12 Identity = 40/140 (28.57%), Postives = 77/140 (55.00%), Query Frame = 1
Query: 49 ELVHCLMILLNKEEGLSLLEQSPDLVPLLALSAHDSESDYVRRSVLTLMTVVAATGPEGYEAVIRAVDHVKLDKEEMYRFTLLVQSLADPDPGSSGLPLKLDTMVFLNTVLSSAFEYEERCSLRRDMLMAGITDSIVAMR 468
E V C+ +LN GL + +S D LA +A D+++ +++ V L++ + +GY+ I A+++ K+ K + YRF+L+V L + + +P + F+NT+L S +++ER LR + + G+ D + +R
Sbjct: 97 ECVRCIKAVLNSRHGLEFMTESADRTRQLA-NALDTDNTMIKKQVFELLSALCLYSEQGYQLAIDALENYKMTKGQRYRFSLIVNELKNAEV----VPYMSACLAFINTILISTDDFDERVRLRNEFVGLGLLDILTKLR 231
BLAST of mRNA_S-ischiensis_contig11.2129.1 vs. uniprot
Match: A0A6P8HVP4_ACTTE (inverted formin-2-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HVP4_ACTTE) HSP 1 Score: 70.1 bits (170), Expect = 5.370e-10 Identity = 40/142 (28.17%), Postives = 76/142 (53.52%), Query Frame = 1
Query: 43 EEELVHCLMILLNKEEGLSLLEQSPDLVPLLALSAHDSESDYVRRSVLTLMTVVAATGPEGYEAVIRAVDHVKLDKEEMYRFTLLVQSLADPDPGSSGLPLKLDTMVFLNTVLSSAFEYEERCSLRRDMLMAGITDSIVAMR 468
E E V C+ ++N E GL + +S V LA A D+ + +++ V L++ + +GY+ I A+++ K+ K + YRF+L++ L + + +P + F+N +L S E+E+R LR + + G+ D + +R
Sbjct: 92 ELECVRCVKEVMNSETGLMAMMESQGFVCSLA-RALDTSNTMIKKQVFELLSALCLYSHQGYQLAIDALENYKITKGQRYRFSLIINELKNAEV----VPYMAACLAFINVILISTDEFEQRVRLRNEFVGLGLLDILSRLR 228
BLAST of mRNA_S-ischiensis_contig11.2129.1 vs. uniprot
Match: A7SLR7_NEMVE (Predicted protein (Fragment) n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SLR7_NEMVE) HSP 1 Score: 68.9 bits (167), Expect = 5.700e-10 Identity = 37/143 (25.87%), Postives = 79/143 (55.24%), Query Frame = 1
Query: 40 LEEELVHCLMILLNKEEGLSLLEQSPDLVPLLALSAHDSESDYVRRSVLTLMTVVAATGPEGYEAVIRAVDHVKLDKEEMYRFTLLVQSLADPDPGSSGLPLKLDTMVFLNTVLSSAFEYEERCSLRRDMLMAGITDSIVAMR 468
L+ E V C+ ++N + GL+ + + + L + A D+++ +++ V L++ + +GY+ I A+++ K+ K + YRF+L+V L + + +P + F+NT+L S +++ER LR + + G+ D + +R
Sbjct: 90 LQLECVQCIKAVMNSKAGLTCIIEHGEYSRKL-VKALDTDNTMIKKQVFELLSALCLYSEQGYQLAIDALENYKMTKGQRYRFSLIVNELKNAEV----VPYMSACLAFINTILISTDDFDERVRLRNEFVGLGLLDILTKLR 227 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2129.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig11.2129.1 >prot_S-ischiensis_contig11.2129.1 ID=prot_S-ischiensis_contig11.2129.1|Name=mRNA_S-ischiensis_contig11.2129.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=253bp DAGGGGPSPEEIELEEELVHCLMILLNKEEGLSLLEQSPDLVPLLALSAHback to top mRNA from alignment at S-ischiensis_contig11:1381308..1384853+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig11.2129.1 ID=mRNA_S-ischiensis_contig11.2129.1|Name=mRNA_S-ischiensis_contig11.2129.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3546bp|location=Sequence derived from alignment at S-ischiensis_contig11:1381308..1384853+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig11:1381308..1384853+ >mRNA_S-ischiensis_contig11.2129.1 ID=mRNA_S-ischiensis_contig11.2129.1|Name=mRNA_S-ischiensis_contig11.2129.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1518bp|location=Sequence derived from alignment at S-ischiensis_contig11:1381308..1384853+ (Schizocladia ischiensis KU_0333)back to top |