mRNA_S-ischiensis_contig11.2062.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig11.2062.1 vs. uniprot
Match: A0A835ZFU5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFU5_9STRA) HSP 1 Score: 255 bits (652), Expect = 1.000e-76 Identity = 134/221 (60.63%), Postives = 153/221 (69.23%), Query Frame = 1
Query: 13 IQKAAERQKMDYVAQTLHDV-------------------GTPLATFALAIESMNSLLPFDKEHLEVVKTCECAIELMTLTRRKAIDYARHHSGQ------------------------------DLRPRLGSTNVRDLVERKCRRIMFGFNSGSSVKIHYNVDPGIATYIVTDGEFLWECLVNYLSNAVKFTNEGDIQCNVYKVTQDSLRFEVRDTGIGIP 528
++ AERQKMDYVAQTLHDV GTPLATFALA+E++ S P ++EHLE ++TC+CAIELMTLTRRKAIDYA+H+SG+ +LRPRLGSTNVR+LVE KCRRIM GFNS S V I YNVD GIA +IVTDGEF+WECLVNYLSNAVKFTNEG IQCNVYK+ D +RFEVRDTGIGIP
Sbjct: 281 VRNEAERQKMDYVAQTLHDVXXXXXXXXXXXXXXXXXXVGTPLATFALAVENLKSSAPMNQEHLEALRTCDCAIELMTLTRRKAIDYAKHYSGELCCTVELTVRKTTTPGTTAAXXXXXXXXGRELRPRLGSTNVRELVETKCRRIMSGFNSASMVPIAYNVDAGIAKFIVTDGEFVWECLVNYLSNAVKFTNEGAIQCNVYKIRPDCVRFEVRDTGIGIP 501
BLAST of mRNA_S-ischiensis_contig11.2062.1 vs. uniprot
Match: A0A835Z742_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z742_9STRA) HSP 1 Score: 152 bits (385), Expect = 1.240e-39 Identity = 83/213 (38.97%), Postives = 122/213 (57.28%), Query Frame = 1
Query: 10 RIQKAAERQKMDYVAQTLHDVGTPLATFALAIESM-NSLLPFDKEHLEVVKTCECAIELMTLTRRKAIDYARHHSGQDLRPRLGSTNVRDLVERKCRRIMFGFNSGSSVKIHYNVDPGIATYIVTDGEFLWECLVNYLSNAVKFTNE--------------------------------GDIQCNVYKV-------TQDSLRFEVRDTGIGIP 528
R+ E + +YVAQTLHD+GTPLATF+L ++ + +S L ++ +V++T + A ++MTLTR+KA+DY RH +G L P + ST++ DLV KCRRIM G+ S V + +DP ++ +++TD +++WEC +NYLSNA K T + G IQ +V V T + LRFEVRDTG G+P
Sbjct: 396 RVVMTGEEVRREYVAQTLHDIGTPLATFSLGLDLLFSSPLVVSNDYRDVLETMKTARDMMTLTRKKAMDYFRHQAGIALVPNIASTDIHDLVLEKCRRIMTGYTGASQVPFQFYIDPRVSRFVLTDRDWVWECSINYLSNAQKLTKDVNSSGDALLHLCTNATGWCALYFEVDSEKCCVGSIQMSVTLVPAPVPGQTPEHLRFEVRDTGPGVP 608
BLAST of mRNA_S-ischiensis_contig11.2062.1 vs. uniprot
Match: A0A7S0Z3C2_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z3C2_9CRYP) HSP 1 Score: 112 bits (280), Expect = 1.270e-25 Identity = 60/164 (36.59%), Postives = 100/164 (60.98%), Query Frame = 1
Query: 46 YVAQTLHDVGTPLATFALAIESMNSLLPFDKEHLEVVKTCECAIELMTLTRRKAIDYARHHSGQDLRPRLGSTNVRDLVERKCRRIMFGFNSGS-SVKIHYNVDPGIATYIVTDGEFLWECLVNYLSNAVKFTNEGDIQCNVYKVTQDSLRF---EVRDTGIGI 525
Y+ Q HD+ TPL +F L +E++ SL E + ++ T + ++ELM LT KAID+++ +G+DL + + +++ +K + ++ G+ S VK Y +DP +A I+TD E+ W L+N+LSNA KFT EG I+ +V ++ + + +V DTGIGI
Sbjct: 199 YIGQVAHDLRTPLNSFMLGLEALRSLNDATPEMIGIIDTMKVSLELMDLTCTKAIDHSKFETGKDLLAKHAPFGITEML-KKSQIVVSGYTHESRGVKYEYKIDPDVAEQIITDKEWFWHMLMNFLSNARKFTTEGYIRTSVGIASEGGVEYLDVKVADTGIGI 361
BLAST of mRNA_S-ischiensis_contig11.2062.1 vs. uniprot
Match: A0A7S1DHP0_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DHP0_HEMAN) HSP 1 Score: 108 bits (270), Expect = 3.190e-24 Identity = 59/164 (35.98%), Postives = 99/164 (60.37%), Query Frame = 1
Query: 46 YVAQTLHDVGTPLATFALAIESMNSLLPFDKEHLEVVKTCECAIELMTLTRRKAIDYARHHSGQDLRPRLGSTNVRDLVERKCRRIMFGFNSGS-SVKIHYNVDPGIATYIVTDGEFLWECLVNYLSNAVKFTNEGDIQCNVYKVTQDSLRF---EVRDTGIGI 525
Y+ Q HD+ TPL +F L +E++ SL E + ++ T + ++ELM +T KAID+++ +G+DL + + D++ +K + ++ G+ S V Y +D G+ ++TD E+ W L+N+LSNA KFT EG I+ ++ V++ L F +V DTGIGI
Sbjct: 263 YIGQVAHDLRTPLNSFNLGLEALRSLDDATPEMVAIIDTMKVSLELMDITCTKAIDHSKFEAGRDLAAKHAPFLLSDVL-KKSQIVVAGYTHESRGVTYEYKIDEGVVDSVITDKEWFWHILMNFLSNARKFTTEGYIRTSIGVVSEGGLPFLEVKVADTGIGI 425
BLAST of mRNA_S-ischiensis_contig11.2062.1 vs. uniprot
Match: L1JXG5_GUITC (Uncharacterized protein n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1JXG5_GUITC) HSP 1 Score: 102 bits (254), Expect = 4.200e-22 Identity = 57/172 (33.14%), Postives = 97/172 (56.40%), Query Frame = 1
Query: 25 AERQKMDYVAQTLHDVGTPLATFALAIESMNSLLPFDKEHLEVVKTCECAIELMTLTRRKAIDYARHHSGQDLRPRLGSTNVRDLVERKCRRIMFGFNSGS-SVKIHYNVDPGIATYIVTDGEFLWECLVNYLSNAVKFTNEGDIQCNVY----KVTQDSLRFEVRDTGIGI 525
A+ Y+ Q HD+ TPL +F L +++++S P E ++ T E + ELM+LT KAID+ + G+DL G+ ++ ++ RK +++ G+ S V + + G+ I++D +++W+ L+NYL NA KFT G I+ V + + +RF V DTGIG+
Sbjct: 192 AKEMNTAYIGQVAHDLRTPLNSFYLGLQALSST-PLTSEQKSLIDTMEISAELMSLTCTKAIDHTKSTMGKDLHAARGAFDLEKML-RKSEKVVLGYTHQSIDVSYEFVIKAGVYKKIISDEDWVWQMLMNYLCNARKFTTHGYIRTTVSLSKSREGKSMIRFSVADTGIGV 361
BLAST of mRNA_S-ischiensis_contig11.2062.1 vs. uniprot
Match: A0A482S9Z2_9ARCH (Hybrid sensor histidine kinase/response regulator n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S9Z2_9ARCH) HSP 1 Score: 99.8 bits (247), Expect = 3.770e-21 Identity = 62/175 (35.43%), Postives = 102/175 (58.29%), Query Frame = 1
Query: 19 KAAERQ-----KMDYVAQTLHDVGTPLATFALAIESMNSLLPFDKEHLEVVKTCECAIELMTLTRRKAIDYARHHSGQDLRPRLGSTNVRDLVERKCRRIMFGFNSGSSVKIHYNVDPGIATYIVTDGEFLWECLVNYLSNAVKFTNEGDIQCNVYKVTQDSLRF-EVRDTGIGI 525
KA E+Q KM YV HD+ TPL +F+ A+ + S ++ E+V + +++LM LT +A+ +++ +G + PR + ++ +L++R + IM N G+ V IHY +A YI+TD E+LW+ ++N L+NA K+T EG I+ + + DS+ V DTGIGI
Sbjct: 230 KAQEQQRINEAKMMYVTCVAHDLKTPLQSFSFAMNLL-SQSTLTQDQREIVGNAQVSVDLMKLTVSQAMHFSKVQTGVTVVPRKSTVSIPELLDR-IKIIMD--NYGAHVPIHYFKSDTLANYIITDEEWLWQMVLNLLTNACKYTTEGCIKVTLQETDNDSMLLCRVSDTGIGI 400
BLAST of mRNA_S-ischiensis_contig11.2062.1 vs. uniprot
Match: A0A7S3UVB5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVB5_HETAK) HSP 1 Score: 90.5 bits (223), Expect = 1.680e-19 Identity = 44/85 (51.76%), Postives = 58/85 (68.24%), Query Frame = 1
Query: 277 LVERKCRRIMFGFNSGSSVKIHYNVDPGIATYIVTDGEFLWECLVNYLSNAVKFTNEGDIQCNV-YKVTQDSLRFEVRDTGIGIP 528
L+ KCRRIM GFN G++V + + + G+A YI++D ++LWE L N+LSNA KFT+ G I V + L FEVRDTGIGIP
Sbjct: 1 LILNKCRRIMSGFNDGAAVDLRFLIHEGVADYIISDRDWLWEMLSNFLSNAKKFTHTGHIITEVRLSANRKELFFEVRDTGIGIP 85
BLAST of mRNA_S-ischiensis_contig11.2062.1 vs. uniprot
Match: A0A7S1DIW1_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DIW1_HEMAN) HSP 1 Score: 92.0 bits (227), Expect = 1.100e-18 Identity = 47/135 (34.81%), Postives = 81/135 (60.00%), Query Frame = 1
Query: 46 YVAQTLHDVGTPLATFALAIESMNSLLPFDKEHLEVVKTCECAIELMTLTRRKAIDYARHHSGQDLRPRLGSTNVRDLVERKCRRIMFGFNSGS-SVKIHYNVDPGIATYIVTDGEFLWECLVNYLSNAVKFTNE 447
Y+ Q HD+ TPL +F L +E++ SL E + ++ T + ++ELM +T KAID+++ +G+DL + + D++ +K + ++ G+ S V Y +D G+ ++TD E+ W L+N+LSNA KFT E
Sbjct: 263 YIGQVAHDLRTPLNSFNLGLEALRSLDDATPEMVAIIDTMKVSLELMDITCTKAIDHSKFEAGRDLAAKHAPFLLSDVL-KKSQIVVAGYTHESRGVTYEYKIDEGVVDSVITDKEWFWHILMNFLSNARKFTTE 396
BLAST of mRNA_S-ischiensis_contig11.2062.1 vs. uniprot
Match: A0A7S3HUI5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HUI5_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 7.430e-17 Identity = 51/173 (29.48%), Postives = 93/173 (53.76%), Query Frame = 1
Query: 37 KMDYVAQTLHDVGTPLATFALAIESMNSLLPFDKEHLEVVKTCECAIELMTLTRRKAIDYARHHSGQDLRPRLGSTNVRDLVERKCRRIMFGFNSGSSVKIHYNVDPGIATYIVTDGEFLWECLVNYLSNAVKFTNEGDIQCNVYKVT----------QDSLRFEVRDTGIGI 525
K+ Y++ HD+ TPL +F ++ +N +E E V+ A++LM LT + +D ++ +G L PR + N+ ++ R I+ G+ G V + + + + I+TD E+LW+ ++N L+NA K+T++G+I+ V K ++ L EV DTG+G+
Sbjct: 420 KLRYISCIAHDLKTPLQSFCFTLDLLNQT-HMHREQREYVQQANVAVDLMRLTISQTMDISKALTGAKLMPRRTTVNLSTVMSR-VEIIINGY--GKQVPVSFKLARDVCDRIITDEEWLWQMVLNLLTNACKYTDKGEIRVTVSKTNGSEEMNREFEEEMLMVEVVDTGVGV 588
BLAST of mRNA_S-ischiensis_contig11.2062.1 vs. uniprot
Match: A0A7S4BUK3_CHRCT (Hypothetical protein (Fragment) n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BUK3_CHRCT) HSP 1 Score: 82.4 bits (202), Expect = 4.000e-15 Identity = 43/128 (33.59%), Postives = 73/128 (57.03%), Query Frame = 1
Query: 145 LEVVKTCECAIELMTLTRRKAIDYARHHSGQDLRPRLGSTNVRDLVERKCRRIMFGFNSGSSVKIHYNVDPGIATYIVTDGEFLWECLVNYLSNAVKFTNEGDIQCNVYKVTQDSLRFEVRDTGIGIP 528
+++V+ A+EL+ +TR KA+ YA+ +G+++ P L NV +L+E K + V++ +++ PG +D +L+ L+N SNA+K T G + +V + SLR EVRDTG G+P
Sbjct: 169 IDLVRRISSALELLDVTRHKALAYAKLEAGREMVPSLKVFNVAELIE-KVASVARDTGKSDRVEVRHHIAPGTPATAKSDASWLFMVLINLASNAMKHTQIGSVTLSVIPAGRGSLRVEVRDTGSGLP 295 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2062.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig11.2062.1 >prot_S-ischiensis_contig11.2062.1 ID=prot_S-ischiensis_contig11.2062.1|Name=mRNA_S-ischiensis_contig11.2062.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=176bp VKIRIQKAAERQKMDYVAQTLHDVGTPLATFALAIESMNSLLPFDKEHLEback to top mRNA from alignment at S-ischiensis_contig11:810343..813020+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig11.2062.1 ID=mRNA_S-ischiensis_contig11.2062.1|Name=mRNA_S-ischiensis_contig11.2062.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2678bp|location=Sequence derived from alignment at S-ischiensis_contig11:810343..813020+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig11:810343..813020+ >mRNA_S-ischiensis_contig11.2062.1 ID=mRNA_S-ischiensis_contig11.2062.1|Name=mRNA_S-ischiensis_contig11.2062.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1056bp|location=Sequence derived from alignment at S-ischiensis_contig11:810343..813020+ (Schizocladia ischiensis KU_0333)back to top |