mRNA_S-ischiensis_contig11.2055.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig11.2055.1 vs. uniprot
Match: D7FWC4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWC4_ECTSI) HSP 1 Score: 80.9 bits (198), Expect = 5.140e-15 Identity = 44/79 (55.70%), Postives = 50/79 (63.29%), Query Frame = 1
Query: 202 GTYAVGDVVEARFGARSKWFPGKIDAV--SPEG--LFTVQYDDGDCEDGVRPSSMRRPGQAEPVLRRGSPVDMKLTRKG 426
G Y D VEARFG RSKWFPGK+ EG L+ V +DDGD E+GV +RRPGQ P LR G VD+KL RKG
Sbjct: 47 GRYQPHDTVEARFGGRSKWFPGKVRRAYEGREGRLLYDVDFDDGDEEEGVLAGRVRRPGQGPPALRAGLVVDVKLARKG 125
BLAST of mRNA_S-ischiensis_contig11.2055.1 vs. uniprot
Match: A0A6H5K1V4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1V4_9PHAE) HSP 1 Score: 77.8 bits (190), Expect = 6.140e-14 Identity = 46/90 (51.11%), Postives = 53/90 (58.89%), Query Frame = 1
Query: 172 HASELLMAAP-GTYAVGDVVEARFGARSKWFPGKIDAV--SPEG--LFTVQYDDGDCEDGVRPSSMRRPGQAEPVLRRGSPVDMKLTRKG 426
H+SE G Y D VEARFG RSKWFPGK+ EG L+ V +DDGD E+GV +RRPGQ P L G VD+KL RKG
Sbjct: 36 HSSETPKPQEDGRYRPQDAVEARFGGRSKWFPGKVRRAYEGREGRLLYDVDFDDGDEEEGVLAGRVRRPGQRPPSLSAGLVVDIKLARKG 125
BLAST of mRNA_S-ischiensis_contig11.2055.1 vs. uniprot
Match: T0S0C4_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S0C4_SAPDV) HSP 1 Score: 58.5 bits (140), Expect = 3.220e-7 Identity = 30/64 (46.88%), Postives = 43/64 (67.19%), Query Frame = 1
Query: 214 VGDVVEARFGARSKWFPGKIDAVSPEGLFTVQYDDGDCEDGVRPSSMRRPGQAEPVLRRGSPVD 405
+GD+VEARFG + K+F GKI V +G + ++YDDGD E V P+ +RR Q P L +G+ V+
Sbjct: 1098 MGDLVEARFGGKDKYFKGKITHVHSDGSYDIEYDDGDEERRVDPALVRRRDQ--PKLTKGAVVE 1159
BLAST of mRNA_S-ischiensis_contig11.2055.1 vs. uniprot
Match: A0A7S2W821_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W821_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 3.510e-7 Identity = 24/68 (35.29%), Postives = 39/68 (57.35%), Query Frame = 1
Query: 154 SGNPNGHASELLMAAPGTYAVGDVVEARFGARSKWFPGKIDAVSPEGLFTVQYDDGDCEDGVRPSSMR 357
S P G + + ++ G +EAR+G + KW+PG+I V +G+F + Y+DGD E GV ++R
Sbjct: 37 SSTPKGKKTRAIKTK--SFRHGQKIEARYGGKGKWYPGRISNVHGDGMFDISYNDGDREKGVSEENIR 102
BLAST of mRNA_S-ischiensis_contig11.2055.1 vs. uniprot
Match: A0A7S2RHP7_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RHP7_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 4.940e-7 Identity = 27/66 (40.91%), Postives = 37/66 (56.06%), Query Frame = 1
Query: 208 YAVGDVVEARFGARSKWFPGKIDAVSPEGLFTVQYDDGDCEDGVRPSSMRRPGQAEPVLRRGSPVD 405
Y VG +VEA+F +SKW+ G+I V+ +G + + Y+DGD E V S MR P RG D
Sbjct: 12 YEVGQMVEAKFRGKSKWYRGEITRVNRDGTYDILYEDGDSEQHVESSLMRSLDMQSPRGHRGGGKD 77
BLAST of mRNA_S-ischiensis_contig11.2055.1 vs. uniprot
Match: A0A7S1XW54_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XW54_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 5.510e-7 Identity = 26/58 (44.83%), Postives = 39/58 (67.24%), Query Frame = 1
Query: 202 GTYAVGDVVEARFGARSKWFPGKIDAVSPEGLFTVQYDDGDCEDGVRPSSMRRPGQAE 375
G A+GD VEAR+ R K++PG + AV +G + + YDDG+ E+GV S +R+ G A+
Sbjct: 5 GALALGDKVEARYKGRGKYYPGSVAAVREDGGYDIAYDDGEREEGVAQSLIRKRGAAD 62
BLAST of mRNA_S-ischiensis_contig11.2055.1 vs. uniprot
Match: A0A067CHD7_SAPPC (SGF29 C-terminal domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CHD7_SAPPC) HSP 1 Score: 57.4 bits (137), Expect = 7.280e-7 Identity = 31/71 (43.66%), Postives = 43/71 (60.56%), Query Frame = 1
Query: 217 GDVVEARFGARSKWFPGKIDAVSPEGLFTVQYDDGDCEDGVRPSSMRR-PGQAEPVLRRGSPVDMKLTRKG 426
GD+VEARFG + K+F GKI V +G + ++YDDGD E V P+ +R P E ++G VD + KG
Sbjct: 393 GDLVEARFGGKDKFFKGKITHVHGDGSYDIEYDDGDEERRVDPALVRLLPTTKETKFKKGDVVDARFGGKG 463
BLAST of mRNA_S-ischiensis_contig11.2055.1 vs. uniprot
Match: A0A7S0I695_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I695_9EUKA) HSP 1 Score: 54.7 bits (130), Expect = 2.380e-6 Identity = 26/61 (42.62%), Postives = 36/61 (59.02%), Query Frame = 1
Query: 196 APGTYAVGDVVEARFGARSKWFPGKIDAVSPEGLFTVQYDDGDCEDGV-----RPSSMRRP 363
AP + +G VEARFG RS+WFPG + ++ +G + Y+DGD E V RPS + P
Sbjct: 115 APTSLEIGQSVEARFGGRSRWFPGVVQHLNEDGTVAINYEDGDQEKKVLQKHVRPSKSKAP 175
BLAST of mRNA_S-ischiensis_contig11.2055.1 vs. uniprot
Match: D7FUN9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUN9_ECTSI) HSP 1 Score: 55.5 bits (132), Expect = 3.870e-6 Identity = 25/55 (45.45%), Postives = 35/55 (63.64%), Query Frame = 1
Query: 196 APGTYAVGDVVEARFGARSKWFPGKIDAVSPEGLFTVQYDDGDCEDGVRPSSMRR 360
+PG AVGD VEARF A S+WF ++ + +G F++ YDDGD E V +R+
Sbjct: 1311 SPGGLAVGDKVEARFRAGSRWFKATVEGKNRDGTFSLSYDDGDFETAVERDHIRK 1365
BLAST of mRNA_S-ischiensis_contig11.2055.1 vs. uniprot
Match: A0A7S2SVE7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVE7_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 4.060e-6 Identity = 29/70 (41.43%), Postives = 43/70 (61.43%), Query Frame = 1
Query: 181 ELLMAAPGTYAV--GDVVEARFGARSKWFPGKIDAVSPEGLFTVQYDDGDCEDGVRPSSMRRPGQAEPVL 384
+ +A+P T+ V GD VEAR+ +F G I V EGLF +QYDDG+ E V P +RR G+++ ++
Sbjct: 197 DAALASPATHGVKEGDRVEARWDGGPDFFSGVILKVHHEGLFNIQYDDGEMETKVPPHLIRRRGESQTLV 266 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2055.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig11.2055.1 >prot_S-ischiensis_contig11.2055.1 ID=prot_S-ischiensis_contig11.2055.1|Name=mRNA_S-ischiensis_contig11.2055.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=79bp MAAPGTYAVGDVVEARFGARSKWFPGKIDAVSPEGLFTVQYDDGDCEDGVback to top mRNA from alignment at S-ischiensis_contig11:774584..775009+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig11.2055.1 ID=mRNA_S-ischiensis_contig11.2055.1|Name=mRNA_S-ischiensis_contig11.2055.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=426bp|location=Sequence derived from alignment at S-ischiensis_contig11:774584..775009+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig11:774584..775009+ >mRNA_S-ischiensis_contig11.2055.1 ID=mRNA_S-ischiensis_contig11.2055.1|Name=mRNA_S-ischiensis_contig11.2055.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=474bp|location=Sequence derived from alignment at S-ischiensis_contig11:774584..775009+ (Schizocladia ischiensis KU_0333)back to top |