mRNA_S-ischiensis_contig11.2025.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig11.2025.1
Unique NamemRNA_S-ischiensis_contig11.2025.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
[Close]
BLAST of mRNA_S-ischiensis_contig11.2025.1 vs. uniprot
Match: A0A6H5KG36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG36_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 3.520e-40
Identity = 103/267 (38.58%), Postives = 133/267 (49.81%), Query Frame = 1 
Query:   10 PYDLLCCCDCGEAFHGWCLGTPVRSMDAGARAAWRCSNCKVCEVCGHSHDMDDSLLVYCELCDRAYHTYCLRPELHEAPEGVXXXXXXXXXXXXXWEQALTSWSTAPDVCNPCGAQRRRAKEHKLRRDLQHRKQVLRRELRDRRDAVAEAEEAWAASAPGAGHVETR-GRSGLAGPAAAEG------------PLLGPAG-WGCGSMRERVGEGRCPVCGEPWVEEDDRMIECDSCKLWVHTPCDPEARRILFVLQQQQQHGASEAG 768
            P+  L C DCGE FH WCL + +  +D  A A+WRC NCKVCEVC  +   D+SLL+ CELCDRAYHTYCL P   + PEG                Q  TSWS+  D C  C  ++RR  E  L+ +L+ R+ +L  ELR RR    E +        GAG       RS ++   A E             PL G +  W  G +     +G CPVC +     DD + ECD CKLWVH  CD   + +  VL+Q + +    AG
Sbjct: 1845 PFTRLFCADCGECFHRWCLPSNIVPLDKKALASWRCPNCKVCEVCTETAKSDESLLLMCELCDRAYHTYCLTPSTDKPPEGTWICGQCISCTTCTAPQVYTSWSSTKDSCQECILKKRR--EEGLQ-ELEARRGLLSCELRRRRAVYRETQARMDTVRDGAGDAYAPPARSSVSSREAKERTAFQKARDVLTKPLNGVSSQWDRGRVAADC-DGSCPVCKKKSDVHDDNVAECDCCKLWVHHACD---KGVGLVLEQPEIYVLPGAG 2104
[Close]
BLAST of mRNA_S-ischiensis_contig11.2025.1 vs. uniprot
Match: D8LHU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHU3_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 1.310e-27
Identity = 96/269 (35.69%), Postives = 122/269 (45.35%), Query Frame = 1 
Query:  103 AAWRCSNCKVCEVCGHSHDMDDSLLVYCELCDRAYHTYCLRPELHEAPEGVXXXXXXXXXXXXXWEQALTSWSTAPDVCNPCGAQRRRAKEHKLRRDLQHRKQVLRRELRDRRDAVAEAEEAWAASAPGAGHV-ETRGRSGLAGPAAAEG------------PLLGPAG-WGCGSMRERVGEGRCPVCGEPWVEEDDRMIECDSCKLWVHTPCDPEARRILFVLQQQQQHGASEAGNGETDYFCLACLGHPSAFAQCQLLFEACEPPGP 867
            AAW      VCEVC  +   D+SLL+ CELCDRAYHTYCL P   + PEG                Q  TSWS+  D C  C  ++RR  E  L+ +L+ R++VL  ELR RR    E +        GAG       RS ++   A E             PL G +  W  G +     +G CPVC +     DD + ECD CKLWVH  CD   + +  VL+             E D+FC ACLG      +C  L    + PGP
Sbjct: 1408 AAW------VCEVCTETAKSDESLLLMCELCDRAYHTYCLTPSTDKPPEGTWICGQCISCTTCDAPQVYTSWSSTKDSCQECILKKRR--EEGLQ-ELEARREVLSCELRRRRAVYRETQARMDTVRDGAGDAYPPPARSSVSSREAKERTAFQKAKDALTKPLNGVSSQWDRGRVAADC-DGSCPVCKKKSDGHDDNVAECDCCKLWVHHACD---KGVGLVLEHP-----------ELDFFCKACLGQDKMELRCTRL----DVPGP 1648
[Close]
BLAST of mRNA_S-ischiensis_contig11.2025.1 vs. uniprot
Match: F0YDE9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDE9_AURAN)

HSP 1 Score: 108 bits (271), Expect = 3.100e-24
Identity = 52/112 (46.43%), Postives = 63/112 (56.25%), Query Frame = 1 
Query:   16 DLLCCCDCGEAFHGWCLGTPVRSMDAGARAAWRCSNCKVCEVCGHSHDMDDSLLVYCELCDRAYHTYCLRPELHEAPEGVXXXXXXXXXXXXX-WEQALTSWSTAPDVCNPC 348
            +LL C DCGEA H  C  TP+ SM   ARA WRC NCKVCE+CG S   D+S L+YC+LCD+AYH  C+ P+L  AP G                + A   WS+  D C  C
Sbjct:   70 ELLFCVDCGEACHAMCASTPIDSMSDAARATWRCPNCKVCELCGESKVDDESRLLYCDLCDKAYHLDCVTPKLDVAPPGRWICGLCVTCRHCGKHKHAAGGWSSRLDCCLDC 181
[Close]
BLAST of mRNA_S-ischiensis_contig11.2025.1 vs. uniprot
Match: A0A6G0WLH6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WLH6_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.630e-19
Identity = 44/112 (39.29%), Postives = 59/112 (52.68%), Query Frame = 1 
Query:   28 CCDCGEAFHGWCLGTPV--RSMDAGARAAWRCSNCKVCEVCGHSHDMDDSLLVYCELCDRAYHTYCLRPELHEAPEGVXXXXXXXXXXXXXWEQALTSWSTAPDVCNPCGAQ 357
            C DCGEAFHG+CL  P+         +  WRC NCK+CE CG     D+S L+ C++C+R YHT+CL+P+L E P                  Q  TSWS +  +C  C  +
Sbjct: 1032 CVDCGEAFHGFCLHPPLDLEGRSEKIQEYWRCPNCKICEFCGRCTPEDESHLLVCDVCERGYHTFCLKPKLREVPSSGFVCGSCVQCESCALPQESTSWSPSASLCIVCSGE 1143
[Close]
BLAST of mRNA_S-ischiensis_contig11.2025.1 vs. uniprot
Match: A0A3L6UUZ0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6UUZ0_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 2.750e-18
Identity = 42/111 (37.84%), Postives = 59/111 (53.15%), Query Frame = 1 
Query:   28 CCDCGEAFHGWCLGTPVRSMDAGARAA----WRCSNCKVCEVCGHSHDMDDSLLVYCELCDRAYHTYCLRPELHEAPEGVXXXXXXXXXXXXXWEQALTSWSTAPDVCNPC 348
            C DCGE FH +CL  P   ++A         WRC NCK+CE CG  H  D++ L+ C++C+R +HT+CL+P+L + P G                Q  T+WS+ P  C  C
Sbjct:  403 CVDCGEGFHTFCL-QPALDLEAKRSDKILEYWRCPNCKICEFCGRCHQEDEAKLLVCDVCERGFHTFCLKPKLRDVPSGGFVCGSCIQCDSCSVPQDKTTWSSTPSSCLTC 512
[Close]
BLAST of mRNA_S-ischiensis_contig11.2025.1 vs. uniprot
Match: A0A397CTX0_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CTX0_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 3.040e-18
Identity = 42/111 (37.84%), Postives = 59/111 (53.15%), Query Frame = 1 
Query:   28 CCDCGEAFHGWCLGTPVRSMDAGARAA----WRCSNCKVCEVCGHSHDMDDSLLVYCELCDRAYHTYCLRPELHEAPEGVXXXXXXXXXXXXXWEQALTSWSTAPDVCNPC 348
            C DCGE FH +CL  P   ++A         WRC NCK+CE CG  H  D++ L+ C++C+R +HT+CL+P+L + P G                Q  T+WS+ P  C  C
Sbjct: 1089 CVDCGEGFHTFCL-QPALDLEAKRSDKILEYWRCPNCKICEFCGRCHQEDEAKLLVCDVCERGFHTFCLKPKLRDVPSGGFVCGSCIQCDSCSVPQDKTTWSSTPSSCLTC 1198
[Close]
BLAST of mRNA_S-ischiensis_contig11.2025.1 vs. uniprot
Match: A0A3R6Z0X4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6Z0X4_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 3.160e-18
Identity = 41/118 (34.75%), Postives = 60/118 (50.85%), Query Frame = 1 
Query:   10 PYDLLCCCDCGEAFHGWCLGTPVRSMDAGAR-----AAWRCSNCKVCEVCGHSHDMDDSLLVYCELCDRAYHTYCLRPELHEAPEGVXXXXXXXXXXXXXWEQALTSWSTAPDVCNPC 348
            P  ++ C DCGE FH +CL   +  ++           WRC NCK+CE CG  +  D++ L+ C++C+R +HT+CL+P L E P G                Q +T+WS  P  C  C
Sbjct:  683 PQSMIFCVDCGEVFHTFCLQPALDILEHTKHNDKILEYWRCPNCKICEFCGRCNQEDEAKLLVCDVCERGFHTFCLKPRLREVPSGGFVCGSCVQCETCSVTQEITAWSPNPSSCLTC 800
[Close]
BLAST of mRNA_S-ischiensis_contig11.2025.1 vs. uniprot
Match: A0A024U111_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U111_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 3.270e-18
Identity = 41/118 (34.75%), Postives = 60/118 (50.85%), Query Frame = 1 
Query:   10 PYDLLCCCDCGEAFHGWCLGTPVRSMDAGAR-----AAWRCSNCKVCEVCGHSHDMDDSLLVYCELCDRAYHTYCLRPELHEAPEGVXXXXXXXXXXXXXWEQALTSWSTAPDVCNPC 348
            P  ++ C DCGE FH +CL   +  ++           WRC NCK+CE CG  +  D++ L+ C++C+R +HT+CL+P L E P G                Q +T+WS  P  C  C
Sbjct: 1107 PQSMIFCVDCGEVFHTFCLQPALDILEHTKHNDKILEYWRCPNCKICEFCGRCNQEDEAKLLVCDVCERGFHTFCLKPRLREVPSGGFVCGSCVQCETCSVTQEITAWSPNPSSCLTC 1224
[Close]
BLAST of mRNA_S-ischiensis_contig11.2025.1 vs. uniprot
Match: W4G8B8_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G8B8_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 3.280e-18
Identity = 42/111 (37.84%), Postives = 59/111 (53.15%), Query Frame = 1 
Query:   28 CCDCGEAFHGWCLGTPVRSMDAGARAA----WRCSNCKVCEVCGHSHDMDDSLLVYCELCDRAYHTYCLRPELHEAPEGVXXXXXXXXXXXXXWEQALTSWSTAPDVCNPC 348
            C DCGE FH +CL  P   ++A         WRC NCK+CE CG  H  D++ L+ C++C+R +HT+CL+P+L + P G                Q  T+WS+ P  C  C
Sbjct: 1135 CVDCGEGFHTFCL-QPALDLEAKRSDKILEYWRCPNCKICEFCGRCHQEDEAKLLVCDVCERGFHTFCLKPKLRDVPSGGFVCGSCIQCDSCSVPQDKTTWSSTPSSCLTC 1244
[Close]
BLAST of mRNA_S-ischiensis_contig11.2025.1 vs. uniprot
Match: A0A448ZD18_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZD18_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 7.730e-18
Identity = 45/118 (38.14%), Postives = 65/118 (55.08%), Query Frame = 1 
Query:   19 LLCCCDCGEAFHGWCLGTPVRSMDAGARAAWRCSNCKVCEVCGHSHDMDDSLLVYCELCDRAYHTYCLRPELHEAPEGVXXXXXXXXXXXXXWEQALTS-------WSTAPDVCNPCG 351
            ++ C DCGE FH +C+  P+ SMDA + AAWRC NCK+CE+ G S + D++ +++CE+CDR ++   L P L +AP G+                AL         WS  P +C  CG
Sbjct:  950 MIFCVDCGEGFHSFCVNAPIHSMDASSVAAWRCPNCKICEISGDSPE-DETKMLFCEMCDRGFNLDLLDPPLSKAPSGIWICGQCVDCRKC--HNALEPKGPSRKHWSRDPHLCYRCG 1064
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2025.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KG36_9PHAE3.520e-4038.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHU3_ECTSI1.310e-2735.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
F0YDE9_AURAN3.100e-2446.43Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A6G0WLH6_9STRA1.630e-1939.29Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A3L6UUZ0_9STRA2.750e-1837.84Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A397CTX0_9STRA3.040e-1837.84Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
A0A3R6Z0X4_9STRA3.160e-1834.75Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A024U111_9STRA3.270e-1834.75Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
W4G8B8_9STRA3.280e-1837.84Uncharacterized protein n=7 Tax=Aphanomyces astaci... [more]
A0A448ZD18_9STRA7.730e-1838.14Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig11contigS-ischiensis_contig11:541726..547486 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score123.2
Seed ortholog evalue2.1e-25
Seed eggNOG ortholog2880.D8LHU3
Preferred namePHF6
KEGG rclassRC00003,RC00060,RC00181,RC00496
KEGG koko:K09186,ko:K09188,ko:K11422,ko:K14959,ko:K18494,ko:K22371
KEGG ReactionR03875,R03938,R04866,R04867
KEGG Pathwayko00310,ko04934,ko05202,map00310,map04934,map05202
GOsGO:0000003,GO:0000122,GO:0000123,GO:0000902,GO:0000904,GO:0000976,GO:0000977,GO:0000980,GO:0000981,GO:0001012,GO:0001067,GO:0001158,GO:0001227,GO:0001541,GO:0001654,GO:0001894,GO:0002376,GO:0002520,GO:0002682,GO:0003002,GO:0003006,GO:0003008,GO:0003674,GO:0003676,GO:0003677,GO:0003680,GO:0003682,GO:0003690,GO:0003700,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005694,GO:0005700,GO:0005730,GO:0005737,GO:0005794,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006304,GO:0006305,GO:0006306,GO:0006325,GO:0006338,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006464,GO:0006473,GO:0006475,GO:0006479,GO:0006725,GO:0006807,GO:0006928,GO:0006935,GO:0006996,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007389,GO:0007399,GO:0007409,GO:0007411,GO:0007423,GO:0007444,GO:0007482,GO:0007548,GO:0007610,GO:0007611,GO:0007612,GO:0007613,GO:0007623,GO:0007632,GO:0008023,GO:0008092,GO:0008150,GO:0008152,GO:0008157,GO:0008168,GO:0008170,GO:0008213,GO:0008270,GO:0008276,GO:0008285,GO:0008306,GO:0008354,GO:0008406,GO:0008542,GO:0008585,GO:0008757,GO:0009058,GO:0009059,GO:0009314,GO:0009416,GO:0009605,GO:0009628,GO:0009653,GO:0009790,GO:0009791,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009952,GO:0009987,GO:0009994,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010638,GO:0010646,GO:0012505,GO:0015631,GO:0016020,GO:0016043,GO:0016070,GO:0016278,GO:0016279,GO:0016458,GO:0016477,GO:0016569,GO:0016570,GO:0016571,GO:0016573,GO:0016604,GO:0016607,GO:0016740,GO:0016741,GO:0018022,GO:0018023,GO:0018024,GO:0018026,GO:0018027,GO:0018130,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019899,GO:0019902,GO:0019903,GO:0019953,GO:0022008,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0030030,GO:0030097,GO:0030154,GO:0030182,GO:0030728,GO:0031056,GO:0031058,GO:0031060,GO:0031062,GO:0031090,GO:0031175,GO:0031248,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031401,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032259,GO:0032268,GO:0032270,GO:0032409,GO:0032411,GO:0032501,GO:0032502,GO:0032504,GO:0032774,GO:0032784,GO:0032786,GO:0032879,GO:0032922,GO:0032968,GO:0032989,GO:0032990,GO:0032991,GO:0033043,GO:0033044,GO:0034243,GO:0034641,GO:0034645,GO:0034654,GO:0034708,GO:0034968,GO:0035065,GO:0035097,GO:0035162,GO:0035216,GO:0035295,GO:0035326,GO:0035640,GO:0036211,GO:0040011,GO:0040029,GO:0042054,GO:0042127,GO:0042221,GO:0042330,GO:0042393,GO:0042592,GO:0042800,GO:0042802,GO:0042803,GO:0042826,GO:0043021,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0043543,GO:0043565,GO:0043933,GO:0043966,GO:0043967,GO:0043984,GO:0044030,GO:0044085,GO:0044093,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044648,GO:0044665,GO:0044703,GO:0044728,GO:0044877,GO:0045137,GO:0045322,GO:0045595,GO:0045637,GO:0045652,GO:0045815,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0046483,GO:0046545,GO:0046660,GO:0046872,GO:0046914,GO:0046983,GO:0048096,GO:0048167,GO:0048168,GO:0048172,GO:0048468,GO:0048477,GO:0048511,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048536,GO:0048568,GO:0048583,GO:0048584,GO:0048608,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048736,GO:0048737,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0048871,GO:0048872,GO:0048873,GO:0050776,GO:0050789,GO:0050793,GO:0050794,GO:0050804,GO:0050877,GO:0050890,GO:0050896,GO:0051049,GO:0051050,GO:0051052,GO:0051053,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051219,GO:0051239,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051568,GO:0051569,GO:0051571,GO:0051674,GO:0051704,GO:0060216,GO:0060249,GO:0060255,GO:0060429,GO:0061458,GO:0061564,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070577,GO:0071339,GO:0071440,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0080182,GO:0090304,GO:0097110,GO:0097159,GO:0097485,GO:0097659,GO:0099177,GO:0120036,GO:0120039,GO:0140030,GO:0140033,GO:0140096,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901532,GO:1901564,GO:1901576,GO:1901674,GO:1901983,GO:1902036,GO:1902275,GO:1902493,GO:1902494,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1903706,GO:1905269,GO:1905642,GO:1990234,GO:1990837,GO:2000026,GO:2000112,GO:2000113,GO:2000615,GO:2000736,GO:2000756,GO:2001023,GO:2001025,GO:2001038,GO:2001040,GO:2001141,GO:2001252
EggNOG free text desc.SET domain
EggNOG OGsCOG2940@1,KOG1080@2759,KOG1084@2759,KOG4443@2759
EC2.1.1.43,2.3.2.26
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03000,ko03036,ko04121
Hectar predicted targeting categoryother localisation
Exons6
Model size967
Cds size966
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig11.2025.1prot_S-ischiensis_contig11.2025.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig11 541726..547486 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815590.637728-CDS-S-ischiensis_contig11:541725..5418541622815590.637728-CDS-S-ischiensis_contig11:541725..541854Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 541726..541854 +
1695739789.2430167-CDS-S-ischiensis_contig11:541725..5418541695739789.2430167-CDS-S-ischiensis_contig11:541725..541854Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 541726..541854 +
1622815590.6515794-CDS-S-ischiensis_contig11:542224..5423981622815590.6515794-CDS-S-ischiensis_contig11:542224..542398Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 542225..542398 +
1695739789.255389-CDS-S-ischiensis_contig11:542224..5423981695739789.255389-CDS-S-ischiensis_contig11:542224..542398Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 542225..542398 +
1622815590.6634362-CDS-S-ischiensis_contig11:543239..5434151622815590.6634362-CDS-S-ischiensis_contig11:543239..543415Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 543240..543415 +
1695739789.2658253-CDS-S-ischiensis_contig11:543239..5434151695739789.2658253-CDS-S-ischiensis_contig11:543239..543415Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 543240..543415 +
1622815590.6750517-CDS-S-ischiensis_contig11:543993..5441441622815590.6750517-CDS-S-ischiensis_contig11:543993..544144Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 543994..544144 +
1695739789.27464-CDS-S-ischiensis_contig11:543993..5441441695739789.27464-CDS-S-ischiensis_contig11:543993..544144Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 543994..544144 +
1622815590.6898792-CDS-S-ischiensis_contig11:545781..5458831622815590.6898792-CDS-S-ischiensis_contig11:545781..545883Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 545782..545883 +
1695739789.2900286-CDS-S-ischiensis_contig11:545781..5458831695739789.2900286-CDS-S-ischiensis_contig11:545781..545883Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 545782..545883 +
1622815590.7006884-CDS-S-ischiensis_contig11:547252..5474861622815590.7006884-CDS-S-ischiensis_contig11:547252..547486Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 547253..547486 +
1695739789.2996826-CDS-S-ischiensis_contig11:547252..5474861695739789.2996826-CDS-S-ischiensis_contig11:547252..547486Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 547253..547486 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig11.2025.1

>prot_S-ischiensis_contig11.2025.1 ID=prot_S-ischiensis_contig11.2025.1|Name=mRNA_S-ischiensis_contig11.2025.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=322bp
ALGPYDLLCCCDCGEAFHGWCLGTPVRSMDAGARAAWRCSNCKVCEVCGH
SHDMDDSLLVYCELCDRAYHTYCLRPELHEAPEGVWVCGQCVDCEACGWE
QALTSWSTAPDVCNPCGAQRRRAKEHKLRRDLQHRKQVLRRELRDRRDAV
AEAEEAWAASAPGAGHVETRGRSGLAGPAAAEGPLLGPAGWGCGSMRERV
GEGRCPVCGEPWVEEDDRMIECDSCKLWVHTPCDPEARRILFVLQQQQQH
GASEAGNGETDYFCLACLGHPSAFAQCQLLFEACEPPGPAGDVGGRHGGA
GGTGAGAAAVQKQAGGRGGRRG
back to top

mRNA from alignment at S-ischiensis_contig11:541726..547486+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig11.2025.1 ID=mRNA_S-ischiensis_contig11.2025.1|Name=mRNA_S-ischiensis_contig11.2025.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=5761bp|location=Sequence derived from alignment at S-ischiensis_contig11:541726..547486+ (Schizocladia ischiensis KU_0333)
GCGCTGGGCCCGTACGACCTCCTGTGCTGTTGCGACTGCGGGGAGGCCTT
CCACGGGTGGTGTCTGGGGACGCCTGTTAGGTCCATGGATGCAGGTGCCC
GGGCCGCGTGGAGGTGCTCAAACTGCAAGGTGGGGGGTGGAGGGAGGGGG
GTGGGGAGGTGGCGGAGGAGGGAGGGGAGGGGGGGAGGTGGAGTAGGGAG
GGGGGGAAGCGTGGGGAGAGAGGGAAGTGTCTCCTCTGTTTGGAATGTGT
GTGTCGTGTCGGTTGATCACACGGGCAATTGAACCTTTGGAGGAGATATT
TCCGGAAGTATGATAGTAGTTGCAGTACAGTTGCGACCCATGGGTGTACT
GTGTGCGCCTTTGTCCTCTACTCAAAAGGGTTAGGTACGTCCGGCCACAG
CACGAGCCCCCCCCCCCACCCCCCCTCAACAGCTCACAGGCACCTACTTA
CCTACTCGTACTTGCTAAACACCGCGTAAAACATGGGACCCGCACGCAGG
TTTGCGAGGTGTGTGGGCACTCGCACGACATGGACGACAGCCTGCTGGTC
TACTGCGAGCTCTGCGACCGCGCCTACCACACCTACTGCCTGCGCCCCGA
GCTGCACGAGGCCCCGGAAGGCGTTTGGGTGTGCGGGCAGTGCGTCGACT
GCGAGGCCTGCGGCTGGGAGCAGGTCAGAGCCCTCGCCCTAACCTAGCAC
TAACCTAATCCTAACCCTAACCCTAACCCTAAACCCACCAAACTCTACCT
ACTGCGTGGCCTTTGGCTATGGCAAAGAGTGAGAGACTGGCCGTACGTGG
CCAGTCTCCCCCACGCCCAACAGAGGAAACGGTGCCGTACCCATACAAGC
AGTCAAGGAGATTTGGTTTTCAATCACCCAAGTAGGCAAGGAGATTGTTT
TCCAATCACCAAGTAGTTTCGGAGATTGACTATTGTAGCGACGCTCCCAC
TGTACTCTACTCTAGGATGTGTGGTCAAGGGTCGTATCCTGCGTAAGAGT
ATGGCTGCGATGCAACTCAAGGGGACCCGCCTCCCCCCCCCCCCAGCCGT
CGCCGCTACATGCTTGGACCCGCATGCGTGGTCGGCGGCAAGACAAAGCA
GAAAGGGACCACGGCAACAGAGCAGGTGGTCGCACAAAGCTTGCACTTTC
ACTCACCCCGCAGCGCACATGCCGCTCGCTCGCTGCACGTGCTTGCGGCA
CGTTGCTTTTGCGCCCCCCCCTTGGTGCGTGCCCCCCCCTCCCACATTTC
GCTTGTCCGGGGCAAGATTGGACGACAGACCATGACTTCTCACTTGTTGC
TCATGTCGTCCCGCCTCCCCCTCCTCACACGCACCACCCGCCACAACCAC
CCGTTCCCTTCCTAAGAACACTCAACTCTTAAATGGGACAACTACTAATA
CGAGAACAGTCAATCTCACACACGTGCGGTTGTACCTCGTTGCAATTTAT
ATGCATCAACACCCATTCCCTTCCCCCCCACTGTTATGGGGCGGCGGCGG
CCGGCTGTGGACAGGCCCTGACGTCGTGGAGCACAGCGCCCGACGTGTGC
AACCCCTGCGGGGCCCAGCGGCGGCGAGCGAAGGAGCACAAGCTGCGGCG
CGACCTCCAGCACCGGAAGCAGGTGCTCCGAAGGGAGCTGAGGGACCGGC
GCGACGCGGTTGCCGAGGCGGAGGAGGCCTGGGCTGCGAGGTGTGTGCTT
AGCCCTTGTACCCCTGAGGTCCGTGTAATTATAGGGGTTTTCCTGTGTGT
CCACTTTAGCAGGGGCAAAAGGGTTAAAAGTGTATAGTTTGCGACGCATG
CGTGCAGACACACGTGTACACGCACACACACACACACATATGCTCACACA
TATGACAGGTGCTGTAACAAGAAACGTGCCCGCCTCTGATGACAGGTGCT
GTAACAAGACACGTGCCCGCCTCGCGCCTCAAGGGGGGAGGGACCAGTTG
TGTCACGCATGTGCCGGCAGTGCCTGAATCAAACAACCCCCCCACCCGTG
CGGCCCCCACCCCTGCCGCCGCCGCCGCCGCCACCACCGTGATGGCCCCC
ACCCACGCAGCCCTCACCCCTCCCCCCCATGCCCATCCTTCTGTGCCGCG
ATCACCATTGCTACCGCTGCTGCCGCTGCCGCCTGCCCCCACCCCCCCTT
CCCCCCTTCCCCCCGCCCCTGCCCCCGCCGGGCCACCCTTGCCGAATGCA
CGCCCCGCATGCATGCGTACACCGGCACTGATGGCTGTGGCGCGATACGG
CCTCGTCACCTGGTGTAGTGCACCGGGAGCTGGCCATGTGGAGACTCGGG
GAAGGTCGGGTTTGGCGGGGCCGGCGGCGGCGGAGGGCCCGCTGCTCGGG
CCGGCGGGCTGGGGCTGCGGTTCTATGCGGGAGAGGGTTGGGGAGGGGCG
GTGCCCGGTGTGTGGCGAGGTGAGTAAGGGGAAGGGATGGGGGGGGGGGT
GGGGGGGCTGATTGGTTTGCTTAGTCGTGGTGGAGGATGGCGTCCGTAGG
GTAGAGGTGTAAGTAGGAATAGGACTGTACTTGGGGGTACTGGAGTAGTA
GAGGACTTTGAGGTAAAGGGTTACGGTGTATGTACTGCTGTAGGTACTTG
GATGTGCGGTGCACGAACGATCCAAATCAGGGTTGGAGGAGAGTTCTTGG
AAGCACCTGGTCAAGTACGAGCGGGACTACAGTATGTGTGTCGTGCAGCG
ATGTGGTGCGACGTGGTTCCCGGTCCGCCGCTCCGTCGAGCATTTTCAAA
GGCATGATGGCATCTTGCAGAATCACATTCATCGTCTGCTGCGCCGTACA
GTAGTGTACCGTCGTCCGCTGAGAATGCCGGCAACTTGTTTGAAGGACGG
GCCGGGCCATGCGATGAGCTGGGTTGCCGACCTTGGAGTAACATACGGGA
CTGGCGGAGCAATCCGCTGCCGTGTAAGTATAGCAGTCCCTCGGTGCGAC
TCAAAGTGCTAGTACGAAGCACGCTAGGCGAGGTGCGGATGTGCTGCGGG
TAGGAAGTACTCTACGTACGTACTTCGTACACGAGTCCTGTAAATGGGCG
AGCCTTTTGGCACGGGGCCTGGAACTCGCCGCTTATCTACCACCTCAAGC
AAGTACGAAGCACTTGAGTACGTGCTTGGAAGTACTCTGAGGAATGTGCT
CACATCGAACAGAGCTGGCCGTAGGTACTCCAACAGCAGGCCCGAGGCCC
CAAACCTTGTTACCCCGGGGGTCTGTTTGTGCTTGGAAGTACCAACCCCA
CTCGCTGCCTCTTCCCTTCCCTTCCCTGCCAGACGAAATCCCGTGGTTTG
TTGCGCTCCAGGGAGTCTCTGAGGGTCTACCTATCGGCCGATAGCAAGCG
CATCTGTTTCGTGCTGGTGCTTCGAGCACTTGAGCATGCGGTCTTGCTGC
TCGCTCGAGTGGGACTCTTTGACGGCTGCGCCGCATAGACTACACTTGTA
CGGATACTCGAGCACTGCTAGTGTAGTAGTAGTACTGCACAACGTGCTGT
TGAAGGGCGCCTCTTTCTCCGGTGTTTTTCGTCTGTTTTGGTGGCGTTCC
TATTTGCTGCGATTGCACGCTTAAAGTGGAGAACCGTGAAGCAGAAAGTG
GTCAGGAGAAGCTGCCGTCTTGGCCATATCATTCTCTCGGTCTTTCCCAC
GGTAGATTGCTGTCTGCCTGTCTTGTCTTCTGCCCTGTCCCCCTCTTCTC
TCTCTCGCTCTCTCTGTACACCTATGCATCCCTCCCTCTCTGTCCCACCC
AACCCTCTCTCCCCATGCATACGCCCCCACCCAAACCCCGCGCACCCCCC
CCCCCTTCTCTCTTCCCAGCTGTCACCCTCCCTGCCTCCCTCTCCCCCCC
TCTCGACTCGCCCTCCCCTTCGGTTGCTCCCCCCTCTCCATCTGTCTGAC
GCCTCTCCCTCTCCCCCGGCCTCTCCCCCCGCCCTCGCTACCTCTCTCCC
TCCGCCACAACCCCTTCCCCACTCCTTCCCCCGTCTGCTTGCCCCCTCGC
GACGCGGTATCCACCCTGTGCCTGCGGGACCGACCCCTCGCGACCGATGC
GGTCAGCCCTGGGTGGAGGAGGACGACCGTATGATAGAGTGCGACTCCTG
CAAGCTGTGGGTGCACACGCCGTGCGACCCGGAGGCGAGGCGCATCCTGT
TTGTGCTCGTGAGTAGTGCCTGTCCCTTGGGACTGAGTATGCAACTATGC
TACTTGCCCTGAATCACGGTGTGCGAGTGTGTGTGTGTGTGTGTGTGTGT
GCTCATTCAGGTCTGACACGTTTCAATGCGTATCACGGTTTGCGCTCGCC
TCTTGCCAGTGGCCCAGCCGCATGATGTGATCTGATGTGATTTGATGTGA
AACTGCACTACGTTCGAGTACGCATCGCATCGAATCACATCACATCACGT
CATTATAGCATACCGCTAGACCGCCGGCCAGCCCCAGAGTGAGGGGGGGG
CAGATGGCCATGGGCCTCGGATCTCTGAGCACTCAGTAGGCGGGGGTGAT
TCATATACGTAGTACATTGTAACAAGGTACTCGAATACAATCGCACGCGC
GTGAGATTGAGTGTTCTCGTACCTCAGTAGGTGGGACGGAGCGATGCCAT
TTTAGCGCCGGCAAGGCTCTCGAGGGACAAGTCCAGTAGTTCCAAGTACT
TCCGAGCACAAACAATCAACCGAGCCGATGCTTCGTGTACTGTACTGTAC
ACCGTAGCTCTAAGTACTCTACTGCGCTTCCGGAAGCAGTTTTGTACGTA
GCAGTGTTGGTCTTGAGCAAACGCGACTGCAGCTCTTGGTCTACTGTACA
GTACAGCAGTACTACGTAGTATGTACTCTCGATTGTTCGCGTGCATCGTC
TTTAACTCCTCCGCGTGCCGTGCGTGAGTTGGTCGTAGCACTTCGGCCAT
GGACCCTCGCCGGTACTTCTGGAAGCGCTGTACTTCGTGCCATTCCAGCC
TCACTCGGCTTACCAGGCGGCGTCATCAGCTAGTGCGTACTCGAGTATGC
AATTGTACAGGTGGTCACTGCTGCTAACAGAGTGCTGACAGGAACAACAC
AGGGCGGGGTGTGGGCCACGTCGCTACCGTATGTAAAGTACCTCAACAGC
GGTCCTTCCTTAGCTCACCAGGGAAGGAGTGCATGAGGAAGTGCAGTACC
ACAGCCTACAGCAGCTACAGAGTCGTTTTCCGACGGGGGGCCGGCGGGCC
CAGCACCCCGTACAGTAGAGTTGGCACTCTACGCATGTGCTGTACTCTAC
TGCACTGCGCGTACTGTACTACAGTACTGTGGCACAGTCCGCCACCGTAG
CTATTCTGTGTCCCCGAGTACGGCACCTGTGGTACTGCGCTTCATGTACT
GTACAGTACAGTACTGTAGCACGTACTTCGAAGTACAATACTGACCCGGT
CAGTCGCACAAGCCGCCAAGAAGCTGTGGCGGCTGTTTCACAGCTAAGTA
CGCCGCCATCAACCCTCTGCCCCTTGCCCCCCGCCCCCCGCCCCCCACCC
CCCGCCCGCCCGCCCGCCTCGCGGCAGCAACAACAGCAGCAGCATGGCGC
GTCTGAGGCTGGCAATGGTGAAACCGACTACTTCTGCCTGGCTTGCCTTG
GCCACCCCTCGGCCTTTGCCCAGTGCCAACTCCTGTTCGAGGCGTGCGAA
CCGCCAGGGCCTGCGGGTGATGTTGGTGGCCGCCATGGCGGGGCAGGCGG
CACGGGGGCCGGGGCGGCGGCAGTGCAGAAGCAGGCTGGAGGGAGAGGAG
GAAGGCGAGGG
back to top

Coding sequence (CDS) from alignment at S-ischiensis_contig11:541726..547486+

>mRNA_S-ischiensis_contig11.2025.1 ID=mRNA_S-ischiensis_contig11.2025.1|Name=mRNA_S-ischiensis_contig11.2025.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1932bp|location=Sequence derived from alignment at S-ischiensis_contig11:541726..547486+ (Schizocladia ischiensis KU_0333)
GCGCTGGGCCCGTACGACCTCCTGTGCTGTTGCGACTGCGGGGAGGCCTT
CCACGGGTGGTGTCTGGGGACGCCTGTTAGGTCCATGGATGCAGGTGCCC
GGGCCGCGTGGAGGTGCTCAAACTGCAAGGCGCTGGGCCCGTACGACCTC
CTGTGCTGTTGCGACTGCGGGGAGGCCTTCCACGGGTGGTGTCTGGGGAC
GCCTGTTAGGTCCATGGATGCAGGTGCCCGGGCCGCGTGGAGGTGCTCAA
ACTGCAAGGTTTGCGAGGTGTGTGGGCACTCGCACGACATGGACGACAGC
CTGCTGGTCTACTGCGAGCTCTGCGACCGCGCCTACCACACCTACTGCCT
GCGCCCCGAGCTGCACGAGGCCCCGGAAGGCGTTTGGGTGTGCGGGCAGT
GCGTCGACTGCGAGGCCTGCGGCTGGGAGCAGGTTTGCGAGGTGTGTGGG
CACTCGCACGACATGGACGACAGCCTGCTGGTCTACTGCGAGCTCTGCGA
CCGCGCCTACCACACCTACTGCCTGCGCCCCGAGCTGCACGAGGCCCCGG
AAGGCGTTTGGGTGTGCGGGCAGTGCGTCGACTGCGAGGCCTGCGGCTGG
GAGCAGGCCCTGACGTCGTGGAGCACAGCGCCCGACGTGTGCAACCCCTG
CGGGGCCCAGCGGCGGCGAGCGAAGGAGCACAAGCTGCGGCGCGACCTCC
AGCACCGGAAGCAGGTGCTCCGAAGGGAGCTGAGGGACCGGCGCGACGCG
GTTGCCGAGGCGGAGGAGGCCTGGGCTGCGAGGCCCTGACGTCGTGGAGC
ACAGCGCCCGACGTGTGCAACCCCTGCGGGGCCCAGCGGCGGCGAGCGAA
GGAGCACAAGCTGCGGCGCGACCTCCAGCACCGGAAGCAGGTGCTCCGAA
GGGAGCTGAGGGACCGGCGCGACGCGGTTGCCGAGGCGGAGGAGGCCTGG
GCTGCGAGTGCACCGGGAGCTGGCCATGTGGAGACTCGGGGAAGGTCGGG
TTTGGCGGGGCCGGCGGCGGCGGAGGGCCCGCTGCTCGGGCCGGCGGGCT
GGGGCTGCGGTTCTATGCGGGAGAGGGTTGGGGAGGGGCGGTGCCCGGTG
TGTGGCGAGTGCACCGGGAGCTGGCCATGTGGAGACTCGGGGAAGGTCGG
GTTTGGCGGGGCCGGCGGCGGCGGAGGGCCCGCTGCTCGGGCCGGCGGGC
TGGGGCTGCGGTTCTATGCGGGAGAGGGTTGGGGAGGGGCGGTGCCCGGT
GTGTGGCGAGCCCTGGGTGGAGGAGGACGACCGTATGATAGAGTGCGACT
CCTGCAAGCTGTGGGTGCACACGCCGTGCGACCCGGAGGCGAGGCGCATC
CTGTTTGTGCTCCCCTGGGTGGAGGAGGACGACCGTATGATAGAGTGCGA
CTCCTGCAAGCTGTGGGTGCACACGCCGTGCGACCCGGAGGCGAGGCGCA
TCCTGTTTGTGCTCCAACAACAGCAGCAGCATGGCGCGTCTGAGGCTGGC
AATGGTGAAACCGACTACTTCTGCCTGGCTTGCCTTGGCCACCCCTCGGC
CTTTGCCCAGTGCCAACTCCTGTTCGAGGCGTGCGAACCGCCAGGGCCTG
CGGGTGATGTTGGTGGCCGCCATGGCGGGGCAGGCGGCACGGGGGCCGGG
GCGGCGGCAGTGCAGAAGCAGGCTGGAGGGAGAGGAGGAAGGCGAGGGCA
ACAACAGCAGCAGCATGGCGCGTCTGAGGCTGGCAATGGTGAAACCGACT
ACTTCTGCCTGGCTTGCCTTGGCCACCCCTCGGCCTTTGCCCAGTGCCAA
CTCCTGTTCGAGGCGTGCGAACCGCCAGGGCCTGCGGGTGATGTTGGTGG
CCGCCATGGCGGGGCAGGCGGCACGGGGGCCGGGGCGGCGGCAGTGCAGA
AGCAGGCTGGAGGGAGAGGAGGAAGGCGAGGG
back to top