mRNA_S-ischiensis_contig11.2020.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig11.2020.1 vs. uniprot
Match: A0A6H5KEF6_9PHAE (2-isopropylmalate synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEF6_9PHAE) HSP 1 Score: 854 bits (2207), Expect = 7.540e-301 Identity = 439/552 (79.53%), Postives = 495/552 (89.67%), Query Frame = 3
Query: 501 VCVKPTRHDVETRRDPTRVKVFDTTLRDGEQSPGCTMTREEKLVVARQLSKLGVDIIEAGFPIASPGDFEAVEEIATLVGNTENPPIICGLARALKKDIDVCGEAVKNARFPRIHTFIATSDIHMKHKLKKTREEVLAITKEMVTHARSLVEDVEFSAEDALRSDYDFLSEVYSVAIEAGATTINVPDTVGYTTPSEFMALMHHLRRTVRGVEGVTISVHGHDDLGMAVANFMAAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKSYYNPNFGRPVESDAPLSNIDTREIFKSSRLVSSMTGMLVQANKAIVGANAFAHESGIHQDGVLKNKETYEIMDAELVGLQQTSAGLVLGKHSGRHAFRSRLTELGYELSGDELNRAFVRFKELADKKKELTNLDLESIVNDEIREVHNSQAFQLVAVQVLAGTRNQPTATVTLYDTAADSESTLAMTGTGPVDAAYKAVDELTGVTDVKLTEYSVASVTAGIDALGEVTARVRDDISGRVFFGRSADTDIIHASSDAYVAAINRLLACRGTPRQTHPQNDV 2156
V V+P+RHD+ET RDPTRVKVFDTTLRDGEQSPGCTMTREEKL+VA+QLSKLGVDIIEAGFPIAS GDFEAV+EIAT+VG +NPPIICGLARAL+KDIDVC AV ARFPRIHTFIATSDIHMKHKLKK+RE+VL IT+EMVTHARS V+DVEFSAEDALRSDYDFLSEVYSVAIEAGATTINVPDTVGYTTP EFM LMHHLR TVRGV+ VTISVHGHDDLGMAVANFM+AIEGGARQVECTINGIGERAGNAALEEIVMALHVRK+YYNP+F RPV S+ L+NI+T+EI KSS+LVSSMTGM+VQANKAIVGANAF+HESGIHQDGVLKNKETYEIMDAELVGL Q ++ LVLGKHSGRHAFRSRL E GY L+ DELNRAF+RFK+LADKKKE+T+LDL SIVNDEIR+V N + ++LV +QV AGT N+PTAT+TLYDT + E +A GTGPVDAAYKA+D++ G KL EYSVASVTAGIDALGEVT RV+D++S R + G++ADTD+IHAS++AY+ A+NRLL+ RG P + HPQ DV
Sbjct: 109 VNVQPSRHDIETGRDPTRVKVFDTTLRDGEQSPGCTMTREEKLMVAKQLSKLGVDIIEAGFPIASQGDFEAVQEIATVVGQGDNPPIICGLARALRKDIDVCANAVAPARFPRIHTFIATSDIHMKHKLKKSREQVLEITREMVTHARSHVDDVEFSAEDALRSDYDFLSEVYSVAIEAGATTINVPDTVGYTTPKEFMGLMHHLRGTVRGVDKVTISVHGHDDLGMAVANFMSAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKAYYNPSFDRPVLSETALTNINTKEIVKSSKLVSSMTGMMVQANKAIVGANAFSHESGIHQDGVLKNKETYEIMDAELVGLYQDTS-LVLGKHSGRHAFRSRLQESGYSLTDDELNRAFLRFKDLADKKKEITSLDLASIVNDEIRDV-NIRRYELVGMQVAAGTTNKPTATLTLYDTDLEKEGCVAAIGTGPVDAAYKAIDDIVGTKSTKLLEYSVASVTAGIDALGEVTVRVQDELSKREYIGKAADTDVIHASAEAYLHAVNRLLSNRGQPDKAHPQKDV 658
BLAST of mRNA_S-ischiensis_contig11.2020.1 vs. uniprot
Match: A0A835YKD7_9STRA (2-isopropylmalate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKD7_9STRA) HSP 1 Score: 797 bits (2059), Expect = 1.080e-279 Identity = 425/590 (72.03%), Postives = 488/590 (82.71%), Query Frame = 3
Query: 411 VSMVTMDNPAAVASASTGPQESPPPLPLKPVCVKPTRHDV--ETRRDPTRVKVFDTTLRDGEQSPGCTMTREEKLVVARQLSKLGVDIIEAGFPIASPGDFEAVEEIATLVGNTENPPIICGLARALKKDIDVCGEAVKNARFPRIHTFIATSDIHMKHKLKKTREEVLAITKEMVTHARSLVEDVEFSAEDALRSDYDFLSEVYSVAIEAGATTINVPDTVGYTTPSEFMALMHHLRRTVRGVEGVTISVHGHDDLGMAVANFMAAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKSYYNPN-FGRPVESDAPLSNIDTREIFKSSRLVSSMTGMLVQANKAIVGANAFAHESGIHQDGVLKNKETYEIMDAELVGLQQTSAGLVLGKHSGRHAFRSRLTELGYELSGDELNRAFVRFKELADKKKELTNLDLESIVNDEIREVHNSQAFQLVAVQVLAGTRNQPTATVTLYDTAADSESTLAMTGTGPVDAAYKAVDELTG----VTDVKLTEYSVASVTAGIDALGEVTARVRDDISGRVFFGRSADTDIIHASSDAYVAAINRLLACRGTPRQTHPQNDVS 2159
+SMV MD +V+S+ P+ V V+P+RHD ET RDPTRVK+FDTTLRDGEQSPGCTMTREEKLVVARQLSKLGVD+IEAGFPIASPGDFEAV+EIA VG NPPIICGLARALKKDIDVC EAV+ ARFPRIHTFIATSDIHM+HKLKKTRE+VLAIT EMV+HA+SL++DVEFSAEDALRSD +FL++V+SVAI AGA+TINVPDTVGYTTP EF +L+H+LR V G++GVTISVHGH+DLGMAVANF+AAIEGGARQVECT+NGIGERAGNAALEEIVMALHVRK Y+N F RP +S+ L+N+ T+E++KSSRLVSSMTGM VQANKAIVGANAFAHESGIHQDGVLKNKETYEIMDA LVG+ Q S LVLGKHSGRHAFRSRL E+GY L+ DELN+AF RFK+LADKKKE++ LDLESIVN+E+RE AF L VQVLAG RN PTATV ++D AD+ES + GTGPVDA ++A++ D+KL EYSV SVTAGIDALGEVT RV+D +GR FFGR ADTD+I+AS+ AYV AINR++A R P HPQ D S
Sbjct: 1 MSMVIMDPTPSVSSS-----------PVAAVNVRPSRHDTDTETGRDPTRVKIFDTTLRDGEQSPGCTMTREEKLVVARQLSKLGVDVIEAGFPIASPGDFEAVKEIAETVGTANNPPIICGLARALKKDIDVCAEAVRPARFPRIHTFIATSDIHMEHKLKKTREQVLAITHEMVSHAKSLIDDVEFSAEDALRSDPEFLAKVFSVAIAAGASTINVPDTVGYTTPGEFKSLIHYLREHVAGIDGVTISVHGHNDLGMAVANFLAAIEGGARQVECTVNGIGERAGNAALEEIVMALHVRKGYFNAAAFARPADSERALTNVVTQELYKSSRLVSSMTGMTVQANKAIVGANAFAHESGIHQDGVLKNKETYEIMDAALVGVVQES-NLVLGKHSGRHAFRSRLAEMGYTLADDELNKAFARFKDLADKKKEISVLDLESIVNEEMREATGHIAFALRGVQVLAGNRNTPTATVIIHDKDADTESHIPAIGTGPVDATFQAINAAVAGHARTGDMKLLEYSVDSVTAGIDALGEVTVRVQDATTGRTFFGRGADTDVIYASAMAYVDAINRIVAARAGPTPKHPQKDTS 578
BLAST of mRNA_S-ischiensis_contig11.2020.1 vs. uniprot
Match: D8LHU2_ECTSI (2-isopropylmalate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHU2_ECTSI) HSP 1 Score: 788 bits (2036), Expect = 3.000e-277 Identity = 407/516 (78.88%), Postives = 458/516 (88.76%), Query Frame = 3
Query: 609 MTREEKLVVARQLSKLGVDIIEAGFPIASPGDFEAVEEIATLVGNTENPPIICGLARALKKDIDVCGEAVKNARFPRIHTFIATSDIHMKHKLKKTREEVLAITKEMVTHARSLVEDVEFSAEDALRSDYDFLSEVYSVAIEAGATTINVPDTVGYTTPSEFMALMHHLRRTVRGVEGVTISVHGHDDLGMAVANFMAAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKSYYNPNFGRPVESDAPLSNIDTREIFKSSRLVSSMTGMLVQANKAIVGANAFAHESGIHQDGVLKNKETYEIMDAELVGLQQTSAGLVLGKHSGRHAFRSRLTELGYELSGDELNRAFVRFKELADKKKELTNLDLESIVNDEIREVHNSQAFQLVAVQVLAGTRNQPTATVTLYDTAADSESTLAMTGTGPVDAAYKAVDELTGVTDVKLTEYSVASVTAGIDALGEVTARVRDDISGRVFFGRSADTDIIHASSDAYVAAINRLLACRGTPRQTHPQNDV 2156
MTREEKL+VA+QL KLGVDIIEAGFPIAS GDFEAV+EIAT+VG NPPIICGLARALKKDIDVC AV ARFPRIHTFIATSDIHMKHKLKK+RE+VL IT+EMVTHARS V+DVEFSAEDALRSDYDFLS+VYSVAIEAGATTINVPDTVGYTTP EFM LMHHLR TVRG++ VTISVHGHDDLGMAVANFM+AIEGGARQVECTINGIGERAGNAALEEIVMALHVRK+YYNP+F RPV S+ L+NI T+EI KSS+LVSSMTGM+VQANKAIVGANAF+HESGIHQDGVLKNKETYEIMDAELVGL Q ++ LVLGKHSGRHAFRSRL E GY L+ DELNRAF+RFK+LADKKKE+T+LDL SIVNDEIR+V N + ++LV +QV AGT N+PTATVTLYDT + E +A GTGPVDAAYKA+D++ G KL EYSVASVTAGIDALGEVT RV+D++S R + G++ADTD+IHAS++AY+ A+NRLL+ RG P + HPQ DV
Sbjct: 1 MTREEKLMVAKQLGKLGVDIIEAGFPIASQGDFEAVQEIATVVGQGGNPPIICGLARALKKDIDVCANAVAPARFPRIHTFIATSDIHMKHKLKKSREQVLEITREMVTHARSHVDDVEFSAEDALRSDYDFLSKVYSVAIEAGATTINVPDTVGYTTPKEFMGLMHHLRGTVRGIDKVTISVHGHDDLGMAVANFMSAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKAYYNPSFDRPVLSETALTNIKTKEIVKSSKLVSSMTGMMVQANKAIVGANAFSHESGIHQDGVLKNKETYEIMDAELVGLHQDTS-LVLGKHSGRHAFRSRLQETGYSLTDDELNRAFLRFKDLADKKKEITSLDLASIVNDEIRDV-NIRRYELVGMQVAAGTTNKPTATVTLYDTDLEKEGCVAAIGTGPVDAAYKAIDDIVGTRSTKLLEYSVASVTAGIDALGEVTVRVQDELSKREYIGKAADTDVIHASAEAYLHAVNRLLSNRGQPDKAHPQKDV 514
BLAST of mRNA_S-ischiensis_contig11.2020.1 vs. uniprot
Match: A0A4D9D6G1_9STRA (2-isopropylmalate synthase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6G1_9STRA) HSP 1 Score: 764 bits (1972), Expect = 1.190e-266 Identity = 399/546 (73.08%), Postives = 461/546 (84.43%), Query Frame = 3
Query: 513 PTRHDVETRRDPTRVKVFDTTLRDGEQSPGCTMTREEKLVVARQLSKLGVDIIEAGFPIASPGDFEAVEEIATLVGNTENPPIICGLARALKKDIDVCGEAVKNARFPRIHTFIATSDIHMKHKLKKTREEVLAITKEMVTHARSLVEDVEFSAEDALRSDYDFLSEVYSVAIEAGATTINVPDTVGYTTPSEFMALMHHLRRTVRGVEGVTISVHGHDDLGMAVANFMAAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKSYYNPNFGRPVESDAPLSNIDTREIFKSSRLVSSMTGMLVQANKAIVGANAFAHESGIHQDGVLKNKETYEIMDAELVGLQQTSAGLVLGKHSGRHAFRSRLTELGYE-LSGDELNRAFVRFKELADKKKELTNLDLESIVNDEIREVHNSQAFQLVAVQVLAGTRNQPTATVTLYDTAADSESTLAMTGTGPVDAAYKAVDELTGVTDVKLTEYSVASVTAGIDALGEVTARVRDDISGRVFFGRSADTDIIHASSDAYVAAINRLLACRGTPRQTHPQ 2147
PTRHD ET RDP RVK+FDTTLRDGEQSPGCTMT EEKL VA+QL+KLGVD+IEAGFPIAS GDF+AV IA VGN ENPPIICGLARAL+KDI+ C AVK A FPRIHTFIATSDIHM HKLKK+REEVL IT+EMVT+ARSL EDVEFSAEDALRSD FL +VYSVA+EAGATT+NVPDTVGYTTPSEF AL+ LR V+GVEGVTISVHGHDDLGMAVANFMAAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKS+YNP FGR E + L+NI T EI+K+SRLVS++TGM++Q NKAIVGANAFAHESGIHQDG+LKNK TYEIMDAE +GL + GLVLGKHSGRHAFRSRLTELGYE LS ELN+AFVRFKE+ADKKKE+TNLDLESIVN+E+R +++ ++L+ QV+ G PTAT+TL + + E T+A TGTGPVDAAY AV + G+ +KL E+ V+SVTAGIDALGEVT R+ D SG++++GRSA+TD++ A++ AY+ A+NR+ RG+ HPQ
Sbjct: 26 PTRHDRETGRDPMRVKIFDTTLRDGEQSPGCTMTAEEKLQVAKQLAKLGVDVIEAGFPIASTGDFDAVRRIAESVGNMENPPIICGLARALRKDIETCWNAVKYAAFPRIHTFIATSDIHMLHKLKKSREEVLGITREMVTYARSLCEDVEFSAEDALRSDPAFLYQVYSVAVEAGATTLNVPDTVGYTTPSEFKALIRGLRAHVKGVEGVTISVHGHDDLGMAVANFMAAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPRFGRAPEDEMALTNIQTTEIWKTSRLVSTLTGMVIQPNKAIVGANAFAHESGIHQDGILKNKSTYEIMDAESIGLAKN--GLVLGKHSGRHAFRSRLTELGYEALSDAELNKAFVRFKEVADKKKEITNLDLESIVNEEMRLEYDAGKYELLRCQVICGDSQVPTATITLLNKEDNQEVTVAATGTGPVDAAYVAVTKALGIEKIKLLEFVVSSVTAGIDALGEVTVRLEDLSSGKIYYGRSANTDVVVAATQAYLGALNRVAISRGS-LPVHPQ 568
BLAST of mRNA_S-ischiensis_contig11.2020.1 vs. uniprot
Match: A0A6V1NWK8_HETAK (2-isopropylmalate synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NWK8_HETAK) HSP 1 Score: 761 bits (1964), Expect = 8.500e-265 Identity = 402/553 (72.69%), Postives = 458/553 (82.82%), Query Frame = 3
Query: 501 VCVKPTRHDVETRRDPTRVKVFDTTLRDGEQSPGCTMTREEKLVVARQLSKLGVDIIEAGFPIASPGDFEAVEEIATLVGNTENPPIICGLARALKKDIDVCGEAVKNARFPRIHTFIATSDIHMKHKLKKTREEVLAITKEMVTHARSLVEDVEFSAEDALRSDYDFLSEVYSVAIEAGATTINVPDTVGYTTPSEFMALMHHLRRTVRGVEGVTISVHGHDDLGMAVANFMAAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKSYYNPNFGRPVESDAPLSNIDTREIFKSSRLVSSMTGMLVQANKAIVGANAFAHESGIHQDGVLKNKETYEIMDAELVGLQQTSAGLVLGKHSGRHAFRSRLTELGYELSGDELNRAFVRFKELADKKKELTNLDLESIVNDEIREVHNSQAFQLVAVQVLAGTRNQPTATVTLYDTAADSESTLAMTGTGPVDAAYKAVDELTGVTDVKLTEYSVASVTAGIDALGEVTARVRDDISGRVFFGRSADTDIIHASSDAYVAAINRLLACRGT--PRQTHPQND 2153
+CVKPT HD+ T RDPTRVKVFDTTLRDGEQSPGCTMT EEK+ VA+QL++LGVD+IEAGFP ASPGDF+AV+ IA VG ENPPIICGLARALK DI+ C EAVK A+FPRIHTFIATSDIHM+ KLKKTRE+V+AIT+EMV ARSLVEDVEFSAEDALRSD DFL EVYSVAIEAGATTINVPDTVGYTTP EF ALMH LR VRG++ VTISVHGHDDLGMAVANF+AAIEGGARQVECTINGIGERAGNAALEE+VMAL+VRK++YNP FGR + + L+N++TREI+K+SRLVSSMTGM+VQ NKAIVGANAFAHESGIHQDGVLKNK TYEIMDAE VGL LVLGKHSGR AFR+RLTELGYE++ +EL RAF RFK LAD KKE+TN+DLE+IVNDEIR N + F+L +QVL G N PTAT + DT SE GTGPVDAA+K + E V DVKL EY+V+SVTAGIDALGEVT R+ D SG+VFFGR+++TD++ AS+ AY+ A NR+ R T + HPQ D
Sbjct: 61 ICVKPTAHDLATGRDPTRVKVFDTTLRDGEQSPGCTMTEEEKIAVAKQLARLGVDVIEAGFPFASPGDFKAVKRIAESVGRLENPPIICGLARALKADIEACAEAVKPAKFPRIHTFIATSDIHMEAKLKKTREQVVAITREMVGLARSLVEDVEFSAEDALRSDPDFLCEVYSVAIEAGATTINVPDTVGYTTPDEFYALMHKLRAGVRGIDQVTISVHGHDDLGMAVANFLAAIEGGARQVECTINGIGERAGNAALEEVVMALNVRKAHYNPAFGRATDDERALTNVNTREIYKTSRLVSSMTGMMVQPNKAIVGANAFAHESGIHQDGVLKNKRTYEIMDAETVGLDDNL--LVLGKHSGRAAFRARLTELGYEMAEEELMRAFSRFKVLADVKKEITNMDLEAIVNDEIRADVNDR-FKLDTIQVLCGDANIPTATARILDTQTGSEIVTNSIGTGPVDAAFKCILEAVKVQDVKLQEYAVSSVTAGIDALGEVTVRLLDLTSGKVFFGRASNTDVVVASAQAYINACNRVQISRETLPVKPLHPQRD 610
BLAST of mRNA_S-ischiensis_contig11.2020.1 vs. uniprot
Match: A0A7S2WKU9_9STRA (2-isopropylmalate synthase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WKU9_9STRA) HSP 1 Score: 759 bits (1961), Expect = 3.220e-264 Identity = 397/557 (71.27%), Postives = 459/557 (82.41%), Query Frame = 3
Query: 492 LKPVCVKPTRHDVETRRDPTRVKVFDTTLRDGEQSPGCTMTREEKLVVARQLSKLGVDIIEAGFPIASPGDFEAVEEIATLVGNTENPPIICGLARALKKDIDVCGEAVKNARFPRIHTFIATSDIHMKHKLKKTREEVLAITKEMVTHARSLVEDVEFSAEDALRSDYDFLSEVYSVAIEAGATTINVPDTVGYTTPSEFMALMHHLRRTVRGVEGVTISVHGHDDLGMAVANFMAAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKSYYNPNFGRPVESDAPLSNIDTREIFKSSRLVSSMTGMLVQANKAIVGANAFAHESGIHQDGVLKNKETYEIMDAELVGLQQTSAGLVLGKHSGRHAFRSRLTELGYE-LSGDELNRAFVRFKELADKKKELTNLDLESIVNDEIREVHNSQAFQLVAVQVLAGTRNQPTATVTLYDTAADSESTLAMTGTGPVDAAYKAVDELTGVTDVKLTEYSVASVTAGIDALGEVTARVRDDISGRVFFGRSADTDIIHASSDAYVAAINRLLACRGTPRQT-HPQNDV 2156
+ PVC +PTRHD+ET RDP RVK+FDTTLRDGEQSPGCTMT EEK+ VARQL++LGVDIIEAGFP AS GDF+AV IA VGN E+PPIICGLARA+KKDI+ C A+++A+FPRIHTFIATSDIHM+HKLKK+R+EVL IT EMV++ARS EDVEFSAEDALRSD +FL EVYS AIEAGATT+NVPDTVGYTTP EF L+ +R VRG+E VTISVHGHDDLGMAVANFM+AIEGGARQVECTINGIGERAGNAALEEIVMALHVRKSYYNP FGRP ES+ PL+NI T+EIFKSSRLVS+MTGM VQ NKAIVGANAFAHESGIHQDGVLKNK TYEIMDAELVGL + LVLGKHSGRHAFRSRL ELGYE LS +E+ RAFVRFKELADKKKE+TNLD+ES+VNDE + + F+L +QV G+ + PT S +T A TGTGPVDAA++A+ ++ D L EYSV+SVTAGIDALGEVT RVRD++ RV++GRS+D D++ AS+ A++ A+NR +A R Q HPQ D+
Sbjct: 67 MHPVCTQPTRHDMETGRDPERVKIFDTTLRDGEQSPGCTMTAEEKIQVARQLARLGVDIIEAGFPFASAGDFDAVSRIAKEVGNLEDPPIICGLARAMKKDIETCARAIEHAKFPRIHTFIATSDIHMEHKLKKSRDEVLDITTEMVSYARSFCEDVEFSAEDALRSDPEFLYEVYSRAIEAGATTLNVPDTVGYTTPREFQTLIEGMRTHVRGIESVTISVHGHDDLGMAVANFMSAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKSYYNPRFGRPAESETPLTNIMTQEIFKSSRLVSTMTGMAVQPNKAIVGANAFAHESGIHQDGVLKNKATYEIMDAELVGLAENL--LVLGKHSGRHAFRSRLVELGYEKLSEEEIQRAFVRFKELADKKKEITNLDIESLVNDETQ-ANIDDRFKLEQLQVFCGSPSTPTXXXXXXXXXXXSVTTRASTGTGPVDAAFQAIKQIIPAQDCTLLEYSVSSVTAGIDALGEVTCRVRDEVVDRVYYGRSSDNDVVVASAQAFINALNRAVASRDDHSQRFHPQRDI 620
BLAST of mRNA_S-ischiensis_contig11.2020.1 vs. uniprot
Match: A0A7S0VM37_9CRYP (2-isopropylmalate synthase n=2 Tax=Hemiselmis TaxID=77924 RepID=A0A7S0VM37_9CRYP) HSP 1 Score: 736 bits (1899), Expect = 1.910e-254 Identity = 387/560 (69.11%), Postives = 463/560 (82.68%), Query Frame = 3
Query: 495 KPVCVKPTRHDVETRRDPTRVKVFDTTLRDGEQSPGCTMTREEKLVVARQLSKLGVDIIEAGFPIASPGDFEAVEEIATLVGNTENPPIICGLARALKKDIDVCGEAVKNARFPRIHTFIATSDIHMKHKLKKTREEVLAITKEMVTHARSLVEDVEFSAEDALRSDYDFLSEVYSVAIEAGATTINVPDTVGYTTPSEFMALMHHLRRTVRGVEGVTISVHGHDDLGMAVANFMAAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKSYYNPNFGRPVESDAPLSNIDTREIFKSSRLVSSMTGMLVQANKAIVGANAFAHESGIHQDGVLKNKETYEIMDAELVGLQQTSAGLVLGKHSGRHAFRSRLTELGYELSGDELNRAFVRFKELADKKKELTNLDLESIVNDEIREVHNSQAFQLVAVQVLAGTRNQPTATVTLYDTAADSESTLAMTGTGPVDAAYKAVDELTGVT--------DVKLTEYSVASVTAGIDALGEVTARVRDDISGRVFFGRSADTDIIHASSDAYVAAINRLLACRGTPR-QTHPQ 2147
KPVCV+PT+HD+ T RDP R+KVFDTTLRDGEQSPGC+MT EEK+ VA+QL+KLGVD+IEAGFPIAS DF AV IAT+VGN ENPPIICGLARA K DI+ C +A+ A FPRIHTFIATSDIHM+HKLKKTREEVLAIT EMV++A+S V+DVEFSAEDALRSD+ FL+EVYSVA++AGATT+NVPDTVGYTTP+EF AL+ +LR V G+EGVTISVHGH+DLGMAV+NF++AIEGGARQVE TINGIGERAGNAALEE+VM L+VRK+YYN GRP +S+A L+NI+ +EI +SS+LV+++TGM VQ NKAIVGANAFAHESGIHQDG+LKNK TYEI+DA +GL++ G+VLGKHSGR AFRSRLTELG ELS DELN+AFVRFKE+ADKKKE+TN+D+ESIV DE ++ F+L VQV G + TATVTL D+ D E T A TGTGPVDAA++AV+ L G++ VKL EYSV SVTAGIDALGEVT R+ D SGR F+GR+++TD++ AS+ AYV A+NRLL R + + HPQ
Sbjct: 82 KPVCVEPTKHDLATGRDPARIKVFDTTLRDGEQSPGCSMTSEEKMQVAKQLAKLGVDVIEAGFPIASNDDFAAVNAIATVVGNQENPPIICGLARATKGDIEACAKAISPAAFPRIHTFIATSDIHMEHKLKKTREEVLAITAEMVSYAKSFVDDVEFSAEDALRSDWAFLAEVYSVAVKAGATTLNVPDTVGYTTPAEFKALVEYLREHVEGIEGVTISVHGHNDLGMAVSNFLSAIEGGARQVEVTINGIGERAGNAALEEVVMGLYVRKNYYNERLGRPADSEAELTNINKKEIHRSSKLVTALTGMPVQPNKAIVGANAFAHESGIHQDGMLKNKLTYEIVDASTIGLEKND-GIVLGKHSGRAAFRSRLTELGIELSDDELNKAFVRFKEVADKKKEITNMDIESIVGDEAQDT-TLDRFKLKHVQVQCGDKAIATATVTLMDSQEDVEVTDAATGTGPVDAAFQAVNRLCGLSGAGQACAEQVKLMEYSVTSVTAGIDALGEVTVRLADVKSGRTFYGRASETDVVVASTAAYVHALNRLLVQRSDLQPKLHPQ 639
BLAST of mRNA_S-ischiensis_contig11.2020.1 vs. uniprot
Match: W7TP25_9STRA (2-isopropylmalate synthase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TP25_9STRA) HSP 1 Score: 746 bits (1927), Expect = 3.610e-248 Identity = 389/521 (74.66%), Postives = 444/521 (85.22%), Query Frame = 3
Query: 513 PTRHDVETRRDPTRVKVFDTTLRDGEQSPGCTMTREEKLVVARQLSKLGVDIIEAGFPIASPGDFEAVEEIATLVGNTENPPIICGLARALKKDIDVCGEAVKNARFPRIHTFIATSDIHMKHKLKKTREEVLAITKEMVTHARSLVEDVEFSAEDALRSDYDFLSEVYSVAIEAGATTINVPDTVGYTTPSEFMALMHHLRRTVRGVEGVTISVHGHDDLGMAVANFMAAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKSYYNPNFGRPVESDAPLSNIDTREIFKSSRLVSSMTGMLVQANKAIVGANAFAHESGIHQDGVLKNKETYEIMDAELVGLQQTSAGLVLGKHSGRHAFRSRLTELGYE-LSGDELNRAFVRFKELADKKKELTNLDLESIVNDEIREVHNSQAFQLVAVQVLAGTRNQPTATVTLYDTAADSESTLAMTGTGPVDAAYKAVDELTGVTDVKLTEYSVASVTAGIDALGEVTARVRDDISGRVFFGRSADTDIIHA 2072
PTRHD ET RDP RVK+FDTTLRDGEQSPGCTMT EEKL VA+QL+KLGVD+IEAGFPIAS GDF+AV IA VGN ENPPIICGLARALKKDI+ C AVK A FPRIHTFIATSDIHM HKLKK+REEVL IT+EMVT+ARSL EDVEFSAEDALRSD FL +VYSVA+EAGATT+NVPDTVGYTTPSEF AL+ LR V+GVEGVTISVHGHDDLGMAVANFMAAI GGARQVECTINGIGERAGNAALEEIVMALHVRKS+YNP FGR E + L+NI T EI+K+SRLVS++TGM++Q NKAIVGANAFAHESGIHQDG+LKNK TYEIMDAE +GL + GLVLGKHSGRHAFRSRLTELGYE LS ELN+AFVRFKE+ADKKKE+TNLDLESIVN+E+R +++ ++L+ QV+ G PTAT+TL + + E T+A TGTGPVDAAY AV + G+ +KL E+ V+SVTAGIDALGEVT R+ D SG++++GRSA+TD++ A
Sbjct: 174 PTRHDRETGRDPMRVKIFDTTLRDGEQSPGCTMTAEEKLQVAKQLAKLGVDVIEAGFPIASTGDFDAVRRIAESVGNMENPPIICGLARALKKDIETCWNAVKYAAFPRIHTFIATSDIHMLHKLKKSREEVLGITREMVTYARSLCEDVEFSAEDALRSDPAFLYQVYSVAVEAGATTLNVPDTVGYTTPSEFKALIRGLRANVKGVEGVTISVHGHDDLGMAVANFMAAIRGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPRFGRAPEDEMALTNIQTTEIWKTSRLVSTLTGMVIQPNKAIVGANAFAHESGIHQDGILKNKSTYEIMDAESIGLAKN--GLVLGKHSGRHAFRSRLTELGYEALSDAELNKAFVRFKEVADKKKEITNLDLESIVNEEMRLGYDAGKYELLRCQVICGDSQVPTATITLLNKEDNQEVTVAATGTGPVDAAYVAVTKALGIEKIKLLEFVVSSVTAGIDALGEVTVRLEDLSSGKIYYGRSANTDVVSA 692
BLAST of mRNA_S-ischiensis_contig11.2020.1 vs. uniprot
Match: A0A7S0EBN5_9CRYP (2-isopropylmalate synthase n=3 Tax=Geminigeraceae TaxID=589343 RepID=A0A7S0EBN5_9CRYP) HSP 1 Score: 719 bits (1855), Expect = 9.670e-248 Identity = 382/565 (67.61%), Postives = 463/565 (81.95%), Query Frame = 3
Query: 492 LKPVCVKPTRHDVETRRDPTRVKVFDTTLRDGEQSPGCTMTREEKLVVARQLSKLGVDIIEAGFPIASPGDFEAVEEIATLVGNTENPPIICGLARALKKDIDVCGEAVKNARFPRIHTFIATSDIHMKHKLKKTREEVLAITKEMVTHARSLVEDVEFSAEDALRSDYDFLSEVYSVAIEAGATTINVPDTVGYTTPSEFMALMHHLRRTVRGVEGVTISVHGHDDLGMAVANFMAAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKSYYNPNFGRPVESDAPLSNIDTREIFKSSRLVSSMTGMLVQANKAIVGANAFAHESGIHQDGVLKNKETYEIMDAELVGLQQTSAGLVLGKHSGRHAFRSRLTELGYELSGDELNRAFVRFKELADKKKELTNLDLESIVNDEIREVHNSQAFQLVAVQVLAGTRNQPTATVTLYDTAADSESTLAMTGTGPVDAAYKAVDELTGV--------TDVKLTEYSVASVTAGIDALGEVTARVRDDISGRVFFGRSADTDIIHASSDAYVAAINRLLACRGT-PRQTHPQNDVS 2159
+KPV +KP++HD+ T RDPTRVKVFDTTLRDGEQSPGC+MT +EK+ VA+QL+++GVD+IEAGFPIAS DF AV++IA +VGN ENPPIICGLARA + DI C EAVK A+FPRIHTFIATSDIHM+HKL+K+REEVL IT+EMV A+SLV+DVEFSAEDALRSD FL++V+SVAI+AGATTINVPDTVG+TTP+EF + +LR+ G+E VTISVHGHDDLGMAVANF+ AIEGGARQVE T+NGIGERAGNAA+EE+VMALHVRKSYYNP FGRP +S+ L+NI +EI +SSRLV+S+TGM+VQ NKAIVGANAFAHESGIHQDG+LKNK TYEI+DA +GL S G+VLGKHSGR AF++RL +LG L+ DE N+AF+RFK+LADKKKE+TN DLESIVNDE +++ ++ F+++ VQV G PTATVTL D + E T A TGTGPVDAA++AV+ L G+ DVKL EYSV+SVTAGIDALGEVT R++D SGRVF GR+ADTD++ AS AYV A+NRL+ R + HPQ V+
Sbjct: 85 MKPVNMKPSKHDLATGRDPTRVKVFDTTLRDGEQSPGCSMTSDEKMQVAKQLARMGVDVIEAGFPIASNDDFIAVKQIADVVGNYENPPIICGLARATEGDIRRCAEAVKGAKFPRIHTFIATSDIHMEHKLRKSREEVLKITEEMVKLAKSLVDDVEFSAEDALRSDRAFLAQVFSVAIKAGATTINVPDTVGFTTPTEFKETIEYLRKHTVGIEDVTISVHGHDDLGMAVANFLGAIEGGARQVEVTVNGIGERAGNAAMEEVVMALHVRKSYYNPMFGRPADSNDALTNIVLKEIHRSSRLVTSLTGMMVQPNKAIVGANAFAHESGIHQDGMLKNKLTYEIIDASTIGLDN-SDGIVLGKHSGRAAFKARLADLGIVLNEDETNKAFIRFKDLADKKKEITNADLESIVNDEAQDLAANR-FKVMHVQVTCGISMVPTATVTLRDEKDNLELTDASTGTGPVDAAFQAVNRLCGIQGGGQANAADVKLMEYSVSSVTAGIDALGEVTVRLQDPRSGRVFLGRAADTDVVVASCVAYVNALNRLILQRSDLAPKLHPQLSVA 647
BLAST of mRNA_S-ischiensis_contig11.2020.1 vs. uniprot
Match: A0A1X6P6Q5_PORUM (2-isopropylmalate synthase n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P6Q5_PORUM) HSP 1 Score: 701 bits (1810), Expect = 2.960e-241 Identity = 378/561 (67.38%), Postives = 441/561 (78.61%), Query Frame = 3
Query: 510 KPTRHDVETRRDPTRVKVFDTTLRDGEQSPGCTMTREEKLVVARQLSKLGVDIIEAGFPIASPGDFEAVEEIATLVGNTENPPIICGLARALKKDIDVCGEAVKNARFPRIHTFIATSDIHMKHKLKKTREEVLAITKEMVTHARSLVEDVEFSAEDALRSDYDFLSEVYSVAIEAGATTINVPDTVGYTTPSEFMALMHHLRRTVRGVEGVTISVHGHDDLGMAVANFMAAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKSYYNPNFGRPVESDAPLSNIDTREIFKSSRLVSSMTGMLVQANKAIVGANAFAHESGIHQDGVLKNKETYEIMDAELVGLQQTSAGLVLGKHSGRHAFRSRLTELGYELSGDELNRAFVRFKELADKKKELTNLDLESIVNDEIREVHNSQAFQLVAVQVLAGTRNQPTATVTLY--------------DTAADSESTLAMTGTGPVDAAYKAVDELTG-VTDVKLTEYSVASVTAGIDALGEVTARVRDDISGRVFFGRSADTDIIHASSDAYVAAINRLLACRGTPRQTHPQ 2147
KPT+HD+ T RDP RVK+FDTTLRDGEQSPG T+T EEK+++ARQL+KLGVD+IEAGFPIAS GDF AV IA VGN +PPIICGLARAL DID C EA+K A FPRIHTFIATSD+HM+HKLKK+R EVLAI K MVTHARSL EDVEFSAEDA+RSD +FL EV+SVA+ AGATT+NVPDTVGYTTP EF L+ +R V GVE VTISVHGHDDLGMAVANF++A+E GARQ+ECTINGIGERAGNAALEE+VMALHVR++YYN GR V PL+NI+ EI+++SRLVSS+TGMLVQ NKAIVGANAF+HESGIHQDGVLKN ETYEIMDA+ VGL+ S +VLGK SGRHAFRSRLTELGYELS +E+NRAFVRFKELAD KK +++ D+ESIVNDE+R V ++ L VQV G + PT+TVTL + AD E T + TGTGPVDA +KA++ G + DV L EY+V+SVT GIDALGEVT RVRD +GR + G S+DTD++ AS+ AYV AINR P HPQ
Sbjct: 69 KPTKHDLATGRDPNRVKIFDTTLRDGEQSPGATLTGEEKMIIARQLAKLGVDVIEAGFPIASVGDFRAVHAIAETVGNRPDPPIICGLARALTADIDRCWEAIKPAAFPRIHTFIATSDVHMEHKLKKSRAEVLAIAKAMVTHARSLCEDVEFSAEDAIRSDPEFLYEVFSVAVAAGATTLNVPDTVGYTTPFEFSKLIRGIRANVVGVENVTISVHGHDDLGMAVANFLSAVESGARQMECTINGIGERAGNAALEELVMALHVRRNYYNSRLGRVV-GGPPLTNINHTEIYQTSRLVSSLTGMLVQPNKAIVGANAFSHESGIHQDGVLKNPETYEIMDAKSVGLKDNS--MVLGKLSGRHAFRSRLTELGYELSDEEINRAFVRFKELADTKKTVSSWDIESIVNDEVRAV-DAPRVALHRVQVSCGNLSVPTSTVTLSVVSGAAMPRMSGSPEPMADGEVTQSATGTGPVDATFKAINAAVGELVDVALEEYTVSSVTKGIDALGEVTVRVRDGATGRRYTGNSSDTDVVVASAMAYVRAINRCTIAAEGPEPIHPQ 625 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2020.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig11.2020.1 >prot_S-ischiensis_contig11.2020.1 ID=prot_S-ischiensis_contig11.2020.1|Name=mRNA_S-ischiensis_contig11.2020.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=683bp MDLARPRVGGRKKANTMAWTVAQVACCGCILAAAHAAEPPAAAFVGMPFSback to top mRNA from alignment at S-ischiensis_contig11:508228..525315- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig11.2020.1 ID=mRNA_S-ischiensis_contig11.2020.1|Name=mRNA_S-ischiensis_contig11.2020.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=17088bp|location=Sequence derived from alignment at S-ischiensis_contig11:508228..525315- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig11:508228..525315- >mRNA_S-ischiensis_contig11.2020.1 ID=mRNA_S-ischiensis_contig11.2020.1|Name=mRNA_S-ischiensis_contig11.2020.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=4098bp|location=Sequence derived from alignment at S-ischiensis_contig11:508228..525315- (Schizocladia ischiensis KU_0333)back to top |