mRNA_S-ischiensis_contig11.2016.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig11.2016.1 vs. uniprot
Match: D8LHY2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHY2_ECTSI) HSP 1 Score: 193 bits (491), Expect = 2.040e-53 Identity = 124/238 (52.10%), Postives = 159/238 (66.81%), Query Frame = 1
Query: 211 PRLEPVPESQIDDVFVLREEDDN---KVIEVYADRFAWVNGKRYIIGHPCDWVVSVGVPRGKGGLEDVSVNSLLMDEIFPTLQGALEQEDIHVFRTAVTLTLQGEFLEDGEEYDEXXXXXXXX-----LEGSQ-------GEVDLEYEVLSEGDGDXXXXXXXXXE--RVPTDIDAVGVELIASFWHEDTEYSLVKHIEPLILIAREEGKGAEREYYLLGEKESQEVSGIVEGLVTRE 873
PRLE VPE ++D +V R+E +VIE YADRFA V G+RY+IGHPCDW VSV P+ +G +E V ++S LM+E+ P LQ LE ED+H+F T +TLTLQG+FL+D XXXXXXXX +E S G+ ++EYEVL EGDG XXXE RVPTDI A GVELIAS+W+ED EY+LVKH++P+ +IAR+ G YYLLGE+E+ V VE ++ E
Sbjct: 122 PRLETVPEDKLDQAYVFRQERPGQTPRVIECYADRFAVVGGRRYMIGHPCDWAVSVCTPKDEGNVEAVPLDSELMEELLPGLQRELEAEDVHLFVTPITLTLQGDFLDDDXXXXXXXXXXXXXXXXXXMEYSSNKGTAFIGDEEIEYEVLEEGDGSYPTEEEXXXEDVRVPTDITAEGVELIASYWYEDKEYALVKHLDPVFVIARQTKNG----YYLLGEEEAAAVKPKVEAMLLEE 355
BLAST of mRNA_S-ischiensis_contig11.2016.1 vs. uniprot
Match: A0A835YQ15_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ15_9STRA) HSP 1 Score: 181 bits (460), Expect = 2.510e-51 Identity = 99/213 (46.48%), Postives = 137/213 (64.32%), Query Frame = 1
Query: 268 EDDNKVIEVYADRFAWVNGKRYIIGHPCDWVVSVGVPRGKGGLEDVSVNSLLMDEIFPTLQGALEQEDIHVFRTAVTLTLQGEFLEDGEEYDEXXXXXXXXLEGSQGEVD-----------LEYEVLSEGDGDXXXXXXXXXERVPTDIDAVGVELIASFWHEDTEYSLVKHIEPLILIAREEGKGAEREYYLLGEKESQEVSGIVEGLVTRE 873
++ +V+E Y D FA VNG++Y++GHPCDW VS+G P +G LE + + LMDE+F TLQ LE++D+H+FRT VTLTLQGEFLEDG E DE E GE D L+++++ EGDG E PTDIDA VELIASFWHE EYSLV+H++P++L+A+ +G R Y L+ E E+ +V+ ++E L+ +E
Sbjct: 3 QETGRVVECYPDVFAVVNGQKYLVGHPCDWCVSIGKPDAEGNLEPIPLEGELMDEVFSTLQTMLEEDDVHLFRTPVTLTLQGEFLEDGYEGDE---------EDDLGEDDYXXXXXXXNDGLQFDIIEEGDGQDPGDFEEE-ELEPTDIDADNVELIASFWHEGAEYSLVRHLDPILLVAKPSQEGDGR-YALVSEAEAADVNPVLERLLEKE 204
BLAST of mRNA_S-ischiensis_contig11.2016.1 vs. uniprot
Match: A0A7S2V6D6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6D6_9STRA) HSP 1 Score: 126 bits (317), Expect = 1.520e-29 Identity = 84/226 (37.17%), Postives = 137/226 (60.62%), Query Frame = 1
Query: 214 RLEPVPESQIDDVFVLREEDDNKVIEVYADRFAWVNGKRYIIGHPCDWVVSVGVPRGKGGLEDVSVNSLLMDEIFPTLQGALEQEDIHVFRTAVTLTLQGEFLEDGEEYDEXXXXXXXXLEGSQGEVDLEYEV------LSEGDGDXXXXXXXXXERVPT-DIDAVGVEL--IASFWHEDTEYSLVKHIEPLILIAREEGKGAEREYYLLGEKESQEVSGIVEGLV 864
R+E + E + +++ +L+E + + IE Y + A+V+ + YII +PCDW V++ G LE V ++S LMDE+FP L+ LEQ+DIH+FRT VTLTLQGEF+++ + E XXXXXX V E E+ + E + E PT D+ + E+ IA+FW++D EYSL+K ++P++++A+ + Y+LL E+E+ +V+ ++E L+
Sbjct: 59 RIEDISEKKRNEIVILQEPETQRCIEAYINVKAFVDDQEYIIAYPCDWAVAMAAENEAGDLELVELDSPLMDELFPFLEQHLEQDDIHLFRTPVTLTLQGEFMDEVDAEMEEDXXXXXXXXXXXXXVMSEEELKKLGVEVIERPAEKVDVEEEIIENEPTHDLAKMEQEVDHIATFWYKDVEYSLMKMVDPVLMVAKPDKVNR---YFLLSEEEASKVNPLLEKLM 281
BLAST of mRNA_S-ischiensis_contig11.2016.1 vs. uniprot
Match: A0A7S2QZU2_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2QZU2_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 1.730e-12 Identity = 73/218 (33.49%), Postives = 111/218 (50.92%), Query Frame = 1
Query: 217 LEPVPESQIDDVFVLREEDDNKVIEVYADRFAWVNGKRYIIGHPCDWVVSVGVPRGKGGLEDVSVNSLLMDEIFPTLQGALEQE---DIHVFRTAVTLTLQGEFLEDGEEYDEXXXXXXXXLEGSQGEVDLEYEVLSEGDGDXXXXXXXXXERVPTDIDAVGVELIASFWHEDTEYSLVKHIEPLILIAREEGKGAEREYYLLGEKESQEVSGIVEGL 861
LE +PE D + D N+ IE YAD A VNG Y +G PCD+ V++ + L + ++ LMD+IFP + +E+E ++++ RT+ TLTL GE L+D EE XXXXXXXX VE++ SF H+ EYSLV+ ++P++L+A+ + + + + LL E+ES +V I+E L
Sbjct: 66 LEKLPEDD-DTPVPFVDVDKNEFIECYADSIAVVNGIEYTVGTPCDYPVALCFFDNEDQLIPIELDEELMDDIFPLAESIVEEEFGEELNLQRTSQTLTLMGE-LDDEEEXXXXXXXXXXXXXXXX-----------------------------------XVEIMISFEHKGREYSLVRLLDPVLLVAKNDPENSTKRI-LLTEEESNKVMPILEDL 245
BLAST of mRNA_S-ischiensis_contig11.2016.1 vs. uniprot
Match: A0A7S2SJU0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJU0_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 2.020e-11 Identity = 77/275 (28.00%), Postives = 122/275 (44.36%), Query Frame = 1
Query: 214 RLEPVPESQIDDVFVLREEDDNKVIEVYADRFAWVN--GKRYIIGHPCDWVVSVGVPRGKGGLEDVSVNSLLMDEIFPTLQGALEQEDIHVFRTAVTLTLQGEFLEDGEEYDEXXXXXXXXLE----------------GSQGEVDLEYEVLSEGDGDXXXXXXXXXERVPTDIDAVG------------------------VELIASFWHEDTEYSLVKHIEPLILIAR----EEGKGAEREYYLLGEKESQEVSGIVEGLVT------REAGG 882
+LE V E D V ++R ++ + IE + D V G Y + HPCD VV++ +G + + MD+++P + LE+E++++ RTA TLTLQG+ DGEE DE XX G+ D Y+ + G+ D+DA VE+IA F + EYSLV+ ++P++LIA+ +G E E+ LL E E++ ++ +VE + +EAGG
Sbjct: 75 QLEEVDE---DRVVIVRCKETLRAIECFIDWRIHVEETGLMYSVVHPCDEVVAICRYDNEGEMIPIDPEGTEMDDLYPFVSHMLEEEELYLMRTATTLTLQGDL--DGEEDDENXXADQDDFNVMDDIEVLNGEEWGPVGADTNEDFSYDDEGQDVGEWGLENDD-------DLDAXXXXXXXXXXXXXXXXXXXXXPGCDLVEVIADFELRNVEYSLVRVMDPVLLIAKVVTPADGTSEEEEFILLSEDEAERIAPLVEAAIEERKRLGKEAGG 337
BLAST of mRNA_S-ischiensis_contig11.2016.1 vs. uniprot
Match: A0A7S1YW68_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YW68_TRICV) HSP 1 Score: 67.0 bits (162), Expect = 8.160e-9 Identity = 65/195 (33.33%), Postives = 96/195 (49.23%), Query Frame = 1
Query: 286 IEVYADRFAWVNGKRYIIGHPCDWVVSVGVPRGKGGLEDVSVNSLLMDEIFPTLQGALEQE---DIHVFRTAVTLTLQGEFLEDGEEYDEXXXXXXXXLEGSQGEVDLEYEVLSEGDGDXXXXXXXXXERVPTDIDAVGVELIASFWHEDTEYSLVKHIEPLILIAREEGKGAEREYYLLGEKESQEVSGIVEGL 861
IE YAD A + G Y IG PCD V++ G L V ++S LMD++FP + +E+E ++ + RT TLTL GE LE E DXXXXXXXXX VE++ SF H+ E+ +V+ ++P++L+ +E+ + +R LL KES EV ++E +
Sbjct: 99 IECYADSIATIGGATYTIGSPCDCSVALTYFGGGEKLMPVELDSELMDDVFPVAESIVEEEFGDELGLQRTPQTLTLVGE---------------------------LEAE-------DXXXXXXXXXXXXXXXXXEEEVEILLSFEHKGMEFHMVRLLDPVLLVGKEDPESPDRRI-LLTPKESDEVMPLLEEM 258
BLAST of mRNA_S-ischiensis_contig11.2016.1 vs. uniprot
Match: A0A7S1BVV7_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BVV7_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 7.040e-7 Identity = 64/205 (31.22%), Postives = 97/205 (47.32%), Query Frame = 1
Query: 286 IEVYADRFAWV-NGKRYIIGHPCDWVVSVGVPRGKGGLEDVSVNSLLMDEIFPTLQGALEQE---DIHVFRTAVTLTLQGEF-LEDGE--EYDEXXXXXXXXLEGSQGEVDLEYEVLSEGDGDXXXXXXXXXERVPTDIDAVGVELIASFWHEDTEYSLVKHIEPLILIARE--EGKGAEREYYLLGEKESQEVSGIVEGLVTRE 873
IEVY D A + +GK+Y IG PCD+ V++ L V + S LM +IFP + +E E ++ + T TLTL GE L+D E EYDE E LS+ D V+++ SF HE EYSLV+ ++P++L+A E + E+ +L +ES+++ +E L+ E
Sbjct: 97 IEVYIDHVAELADGKKYHIGMPCDYAVTL-CHIEDDDLIPVELGSDLMGKIFPVAESLIEDEFGEELILQNTPQTLTLVGELDLDDSEDDEYDE--------------------EDLSD--------------------DEEEVQMLLSFDHEGKEYSLVRLLDPVLLVAGEPVNQESGVNEHEMLTIEESEKIIPELERLLMEE 260
BLAST of mRNA_S-ischiensis_contig11.2016.1 vs. uniprot
Match: A0A2A2THK4_9CYAN (Uncharacterized protein n=1 Tax=Calothrix elsteri CCALA 953 TaxID=987040 RepID=A0A2A2THK4_9CYAN) HSP 1 Score: 57.0 bits (136), Expect = 7.510e-6 Identity = 51/206 (24.76%), Postives = 92/206 (44.66%), Query Frame = 1
Query: 268 EDDNKVIEVYADRFAWVNGKRYIIGHPCDWVVSVGVPRGKGGLEDVSV--NSLLMDEIFPTLQGALEQEDIHVFRTAVTLTLQGEF--LEDGEEYDEXXXXXXXXLEGSQGEVDLEYEVLSEGDGDXXXXXXXXXERVPTDIDAVGVELIASFWHEDTEYSLVKHIEPLILIAREEGKGAEREYYLLGEKESQEVSGIVEGLVTRE 873
+D + +E Y + V G+ Y++ P D V + +G E+ + + +++EIFPT Q L ++++ + TA LT+ GE +E+ E + LE + DLE E L +L+A+F+HE+ EY++ ++PL+ AR G LL +E ++V ++E + E
Sbjct: 22 DDQGRSLECYVEHSLSVEGQEYVLLLPVDSPVEIFAWQGDDEEEEAILVEDDAIVEEIFPTAQAVLSEQNLILKNTAYALTVAGELPPVEESELF---------TLEIEDEDADLEPEQL---------------------------QLLATFYHEEQEYAIYTPLDPLLFFARFTKSGKPE---LLSPEEFRKVQPLLEEQLFNE 188
BLAST of mRNA_S-ischiensis_contig11.2016.1 vs. uniprot
Match: A0A251WAF5_9CYAN (Uncharacterized protein n=2 Tax=unclassified Alkalinema TaxID=2635015 RepID=A0A251WAF5_9CYAN) HSP 1 Score: 56.2 bits (134), Expect = 1.230e-5 Identity = 54/176 (30.68%), Postives = 88/176 (50.00%), Query Frame = 1
Query: 286 IEVYADRFAWVNGKRYIIGHPCDWVVSVGVPRGKGGLEDVSVNSLLMDE-----IFPTLQGALEQEDIHVFRTAVTLTLQGEF--LEDGEEYDEXXXXXXXXLEGSQGEVDLEYEVLSEGDGDXXXXXXXXXERVPTDIDAVGVELIASFWHEDTEYSLVKHIEPLILIAREEGKG 792
++ Y + V G+ Y++ P D + + + GG E+ +V L+ DE IFPT + L ++++ + RTAV LT++G+ LED E+YDEXXXXXXX E ++L+ASF+++D EYS+ H++P ++AR + KG
Sbjct: 21 LDCYIEHSLSVEGQDYVLLLPVDSTIEIVTWQSDGGDEEEAV--LVEDEAEVQRIFPTAKAVLGEQNLVLKRTAVVLTVEGDLPDLED-EDYDEXXXXXXXQEE---------------------------------------LQLLASFYNQDQEYSVYAHLDPYFILARMDEKG 154
BLAST of mRNA_S-ischiensis_contig11.2016.1 vs. uniprot
Match: A0A7C9U1J5_9CYAN (DUF3727 domain-containing protein n=1 Tax=Oscillatoria sp. SIO1A7 TaxID=2607767 RepID=A0A7C9U1J5_9CYAN) HSP 1 Score: 56.2 bits (134), Expect = 1.580e-5 Identity = 53/216 (24.54%), Postives = 101/216 (46.76%), Query Frame = 1
Query: 223 PVPESQIDDVFVLREEDDNKVIEVYADRFAWVNGKRYIIGHPCDWVVSVGVPRGKGGLED-VSVNSLL--MDEIFPTLQGALEQEDIHVFRTAVTLTLQGEFLEDGEEYDEXXXXXXXXLEGSQGEVDLEYEVLSEGDGDXXXXXXXXXERVPTDIDAVGVELIASFWHEDTEYSLVKHIEPLILIAREEGKGAEREYYLLGEKESQEVSGIVEGL 861
P ESQ ++ L+++ + + Y + + K+Y++ P D V + R G E+ V++++ +DEIFP + LE++++ + RTA+TLT GE + E+ E EY+ L E + + D ++ +A+F+ E+ EYS+ ++PL ++AR+ +G E LL +E + ++ L
Sbjct: 8 PEKESQSPEICTLKDK-FGRSLPCYIEHYFEAEAKKYVVLLPVDLPVELFAWRESGDEEELVTIDNEAPEIDEIFPLAKAVLEEQNLTLNRTALTLTASGELPDIAED-----------------EPPEEYQQLGE---------------LREEDDYEELQWLATFYKEEQEYSIYAPLDPLFIVARQNKEG---EAELLSAEEESALEPMLPSL 187 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2016.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig11.2016.1 >prot_S-ischiensis_contig11.2016.1 ID=prot_S-ischiensis_contig11.2016.1|Name=mRNA_S-ischiensis_contig11.2016.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=269bp MSSAGRGMAANNGRPKPKKGGGGKKDGRKSSRTSLPRLEPVPESQIDDVFback to top mRNA from alignment at S-ischiensis_contig11:466201..474766+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig11.2016.1 ID=mRNA_S-ischiensis_contig11.2016.1|Name=mRNA_S-ischiensis_contig11.2016.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=8566bp|location=Sequence derived from alignment at S-ischiensis_contig11:466201..474766+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig11:466201..474766+ >mRNA_S-ischiensis_contig11.2016.1 ID=mRNA_S-ischiensis_contig11.2016.1|Name=mRNA_S-ischiensis_contig11.2016.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1614bp|location=Sequence derived from alignment at S-ischiensis_contig11:466201..474766+ (Schizocladia ischiensis KU_0333)back to top |