mRNA_S-ischiensis_contig11.2001.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig11.2001.1
Unique NamemRNA_S-ischiensis_contig11.2001.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
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BLAST of mRNA_S-ischiensis_contig11.2001.1 vs. uniprot
Match: D8LJ72_ECTSI (Photosystem II 11 kDa protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ72_ECTSI)

HSP 1 Score: 186 bits (473), Expect = 2.560e-54
Identity = 96/150 (64.00%), Postives = 113/150 (75.33%), Query Frame = 3 
Query:  243 MTSGDQPVSRGEMLGAFAKAAAAAALTGSLPAL---AEEAAAPXXXXXXXEAPPTDWGMTRSYYEDAKKMVTHMRYCTNMEKGTPDMDKIATNCRREMTDFVALYRRSTNISGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLNQ 683
            M+ GD+ +SR   + AF+  AAA     ++PA    AEEAAAP       + PP+DWG+T+ YY DA KMV HMRYCTNMEKG P M  IA NC++EM +FV+ YRRS+NI+GKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRL Q
Sbjct:   44 MSVGDEAMSRKNAIAAFSAGAAAVLGAAAVPAAVFAAEEAAAPAPAAVSEDGPPSDWGLTKQYYPDASKMVRHMRYCTNMEKGDPYMADIANNCKKEMVEFVSNYRRSSNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQ 193
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BLAST of mRNA_S-ischiensis_contig11.2001.1 vs. uniprot
Match: A0A836CEQ5_9STRA (Photosystem II Pbs27-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEQ5_9STRA)

HSP 1 Score: 170 bits (430), Expect = 4.990e-48
Identity = 97/188 (51.60%), Postives = 119/188 (63.30%), Query Frame = 3 
Query:  126 MQLVAIATLGFLGCTSAFAPVGMPVTGRATRCGAATPLSMTSGDQPVSRGEMLGAFAKAAAAAALTGSLPALAEEAAAPXXXXXXXEAP----PTDWGMTRSYYEDAKKMVTHMRYCTNMEKGTPDMDKIATNCRREMTDFVALYRRSTNISGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRL 677
            M+   +AT+  LG   AF P     +  A R  A + + M+S    V R   L + A AA   A     PA AE+AA         +AP    PTDWG+T+ YY DA K+V+HMRY T++EKG   ++  A NCR+EM DFV+ YRR  N+SGKLSYSNLYTSI+VLAGHYASYGPKFPVPEKRRKRL
Sbjct:    1 MKGAVVATISLLGGACAFQPTSFAGSALAPRTAATSAVRMSSEASDVDRRAFLSSTAAAAMTVASAFVAPAFAEDAA-------PAKAPLGPMPTDWGLTKDYYTDASKVVSHMRYATSLEKGAAGIEMTAKNCRQEMIDFVSYYRRFPNVSGKLSYSNLYTSINVLAGHYASYGPKFPVPEKRRKRL 181
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BLAST of mRNA_S-ischiensis_contig11.2001.1 vs. uniprot
Match: A0A836C8X1_9STRA (Photosystem II Pbs27-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8X1_9STRA)

HSP 1 Score: 162 bits (409), Expect = 4.650e-45
Identity = 97/185 (52.43%), Postives = 113/185 (61.08%), Query Frame = 3 
Query:  126 MQLVAIATLGFLGCTSAFAPVGMPVTGRATRCGAATPLSMTSGDQPVSRGEMLGAFAKAAAAAALTGSLPALAEEA-AAPXXXXXXXEAPPTDWGMTRSYYEDAKKMVTHMRYCTNMEKGTPDMDKIATNCRREMTDFVALYRRSTNISGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRL 677
            M+  A+ATL  +G  SAF  V M V   A               Q  SR   L   A A AAA      PALA  A   P          P DWG+T+ YY DA K+V+HMRY T+MEKG  +++ +A NCR+EM DFV+ YRR  N+SGKLSYSNLYTSI+VLAGHYASYGPKFPVPEKRRKRL
Sbjct:    1 MKSTAVATLALVGAASAFHSVTMTVPKSAQVA------------QDFSRRGFLSTVAAAGAAAVA----PALAIAADGTPAVEKVPLGPMPVDWGLTKDYYTDASKVVSHMRYATSMEKGAANIENVAKNCRQEMIDFVSYYRRFPNVSGKLSYSNLYTSINVLAGHYASYGPKFPVPEKRRKRL 169
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BLAST of mRNA_S-ischiensis_contig11.2001.1 vs. uniprot
Match: A0A7S3ZPN6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPN6_9STRA)

HSP 1 Score: 150 bits (378), Expect = 4.070e-41
Identity = 73/121 (60.33%), Postives = 89/121 (73.55%), Query Frame = 3 
Query:  330 LPALAEEAAAPXXXXXXXEAP---PTDWGMTRSYYEDAKKMVTHMRYCTNMEKGTPDMDKIATNCRREMTDFVALYRRSTNISGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLNQ 683
            +PA A++A A         AP   P DWG+T  YY DA K+V HMR  T++EKG P+M+ IA NC++EM DFV+ YRR TN+SGK S+S LYT+I+VLAGHY SYGPKFPVPEKRRKRL Q
Sbjct:    1 MPAFADDAPAAPPAEAEAPAPVEFPKDWGITSDYYTDAAKVVAHMRLATSLEKGAPNMEMIALNCKKEMIDFVSFYRRFTNVSGKQSFSTLYTAINVLAGHYTSYGPKFPVPEKRRKRLFQ 121
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BLAST of mRNA_S-ischiensis_contig11.2001.1 vs. uniprot
Match: A0A7R9U8B8_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8B8_9STRA)

HSP 1 Score: 145 bits (365), Expect = 3.160e-38
Identity = 72/128 (56.25%), Postives = 93/128 (72.66%), Query Frame = 3 
Query:  300 AAAAAALTGSLPALAEEAAAPXXXXXXXEAPPTDWGMTRSYYEDAKKMVTHMRYCTNMEKGTPDMDKIATNCRREMTDFVALYRRSTNISGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLNQ 683
            AA  + L G+  A+A+E AAP         PPTDWG++  YY+DA ++V HMRY T M K TP+ + IATNC++EM DFV+ YRR  N++GK S+S LYT+I+VLAGHY +YG KFPVPEKR+KRL Q
Sbjct:   70 AALGSLLAGAQMAVADEVAAPASTELGP--PPTDWGLSNQYYDDAVRVVNHMRYATIMPKSTPNYEAIATNCKKEMIDFVSFYRRFPNVAGKPSFSTLYTAINVLAGHYTNYGVKFPVPEKRKKRLLQ 195
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BLAST of mRNA_S-ischiensis_contig11.2001.1 vs. uniprot
Match: A0A7S2UVY8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVY8_9STRA)

HSP 1 Score: 145 bits (365), Expect = 4.200e-38
Identity = 80/152 (52.63%), Postives = 103/152 (67.76%), Query Frame = 3 
Query:  234 PLSMTSGDQPVSRGEMLGAFAKAAAAAALTGSLPALAEEAAAPXXXXXXXEAPP--TDWGMTRSYYEDAKKMVTHMRYCTNMEKGTPDMDKIATNCRREMTDFVALYRRSTNISGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLNQ 683
            PL M +G  PVSR +++   A  + A  +T    A AEEA AP       +  P  TD+ +   YY DA  +V +MRY T M+KGTP+M++I  + R++M DFVA YRR+  ++G+LSYS LYTSI+VLAGHYASYGPKFPVPEKRRKRL Q
Sbjct:   56 PLQMAAG--PVSRRDLISNIATISVAGVMTTGAAAFAEEAVAPAAAPAKPDMGPVPTDFKVKGEYYPDAILLVKNMRYATLMDKGTPNMEQIGKSVRKQMVDFVAQYRRNNKVNGRLSYSTLYTSINVLAGHYASYGPKFPVPEKRRKRLLQ 205
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BLAST of mRNA_S-ischiensis_contig11.2001.1 vs. uniprot
Match: A0A7S1XRA0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRA0_9STRA)

HSP 1 Score: 140 bits (352), Expect = 2.330e-36
Identity = 61/97 (62.89%), Postives = 80/97 (82.47%), Query Frame = 3 
Query:  393 PTDWGMTRSYYEDAKKMVTHMRYCTNMEKGTPDMDKIATNCRREMTDFVALYRRSTNISGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLNQ 683
            PTDWG+T  YY+DA ++V+HMRY T+M KGTP+ + IA +C++EM DFV+ YRR  N++GK S+S LYT+I+VLAGHY +YG KFPVPEKR+KRL Q
Sbjct:   95 PTDWGLTNEYYKDAPRVVSHMRYATSMPKGTPNYENIAKSCKKEMIDFVSFYRRFPNVAGKPSFSTLYTAINVLAGHYTNYGLKFPVPEKRKKRLFQ 191
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BLAST of mRNA_S-ischiensis_contig11.2001.1 vs. uniprot
Match: F0YDF6_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDF6_AURAN)

HSP 1 Score: 135 bits (341), Expect = 4.700e-36
Identity = 62/88 (70.45%), Postives = 74/88 (84.09%), Query Frame = 3 
Query:  420 YYEDAKKMVTHMRYCTNMEKGTPDMDKIATNCRREMTDFVALYRRSTNISGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLNQ 683
            YY DA+K+V HMR  T+++KG PDM+KIA N ++EM DFVA YRR TN+SGK S+S LYT+I+VLAGHY SYGPKFPVPEKRRKRL Q
Sbjct:    2 YYTDAQKVVAHMRLATSLDKGAPDMEKIALNTKKEMIDFVAFYRRFTNVSGKQSFSTLYTAINVLAGHYTSYGPKFPVPEKRRKRLYQ 89
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BLAST of mRNA_S-ischiensis_contig11.2001.1 vs. uniprot
Match: W7TYA6_9STRA (Photosystem ii 11 kd protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYA6_9STRA)

HSP 1 Score: 135 bits (341), Expect = 6.500e-35
Identity = 68/128 (53.12%), Postives = 91/128 (71.09%), Query Frame = 3 
Query:  303 AAAAALTGSLPALA-EEAAAPXXXXXXXEAPPTDWGMTRSYYEDAKKMVTHMRYCTNMEKGTPDMDKIATNCRREMTDFVALYRRSTNISGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLNQ 683
            AA A L+  LPALA EE   P         PP ++ +++ YY+DA ++V HM+Y T M + TP+ + IA + + EMTDFV+ YRR  N++GK S+S LYT+I+V+AGHYASYGPKFP+PEKRRKRL Q
Sbjct:   50 AAMAGLSLVLPALAAEEGGVPTAAPVDLGVPPVNFDLSKEYYKDAAQVVNHMKYATFMNRDTPNYENIAKSVKNEMTDFVSYYRRFNNVAGKPSFSTLYTAINVMAGHYASYGPKFPIPEKRRKRLQQ 177
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BLAST of mRNA_S-ischiensis_contig11.2001.1 vs. uniprot
Match: A0A7S3NKQ6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NKQ6_9STRA)

HSP 1 Score: 132 bits (332), Expect = 1.120e-33
Identity = 59/97 (60.82%), Postives = 79/97 (81.44%), Query Frame = 3 
Query:  393 PTDWGMTRSYYEDAKKMVTHMRYCTNMEKGTPDMDKIATNCRREMTDFVALYRRSTNISGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLNQ 683
            PT++G+T+ YY DA K+V HMR  T+++KG+P++++IA   ++EM  FVA YRR T ++GK S+S LYT+I+VLAGHY SYGPKFPVPEKRRKRL Q
Sbjct:   74 PTNYGITQDYYTDAAKVVAHMRLATSLDKGSPNIEQIAIETKKEMNAFVAFYRRFTTVTGKQSFSTLYTAINVLAGHYTSYGPKFPVPEKRRKRLYQ 170
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2001.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ72_ECTSI2.560e-5464.00Photosystem II 11 kDa protein n=2 Tax=Ectocarpus T... [more]
A0A836CEQ5_9STRA4.990e-4851.60Photosystem II Pbs27-domain-containing protein n=1... [more]
A0A836C8X1_9STRA4.650e-4552.43Photosystem II Pbs27-domain-containing protein n=1... [more]
A0A7S3ZPN6_9STRA4.070e-4160.33Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7R9U8B8_9STRA3.160e-3856.25Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2UVY8_9STRA4.200e-3852.63Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1XRA0_9STRA2.330e-3662.89Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
F0YDF6_AURAN4.700e-3670.45Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
W7TYA6_9STRA6.500e-3553.13Photosystem ii 11 kd protein n=2 Tax=Monodopsidace... [more]
A0A7S3NKQ6_9STRA1.120e-3360.82Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig11contigS-ischiensis_contig11:328828..334135 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score187.6
Seed ortholog evalue7.2e-45
Seed eggNOG ortholog2880.D8LJ72
KEGG koko:K08902
KEGG Pathwayko00195,ko01100,map00195,map01100
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006091,GO:0006807,GO:0008150,GO:0008152,GO:0009314,GO:0009416,GO:0009507,GO:0009534,GO:0009535,GO:0009536,GO:0009543,GO:0009579,GO:0009628,GO:0009642,GO:0009765,GO:0009987,GO:0010206,GO:0015979,GO:0016020,GO:0019538,GO:0019684,GO:0030091,GO:0031976,GO:0031977,GO:0031978,GO:0031984,GO:0034357,GO:0042651,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0051716,GO:0055035,GO:0071214,GO:0071478,GO:0071482,GO:0071484,GO:0071704,GO:0104004,GO:1901564
EggNOG free text desc.Photosystem II Pbs27
EggNOG OGs2CXSW@1,2RZI3@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00194
Hectar predicted targeting categorychloroplast
Ec32 ortholog descriptionphotosystem II 11 kDa protein
Ec32 orthologEc-02_005010.1
Exons4
Model size1079
Cds size753
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig11.2001.1prot_S-ischiensis_contig11.2001.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig11 329029..334010 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815588.2213364-UTR-S-ischiensis_contig11:328827..3290281622815588.2213364-UTR-S-ischiensis_contig11:328827..329028Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 328828..329028 -
1695739787.513258-UTR-S-ischiensis_contig11:328827..3290281695739787.513258-UTR-S-ischiensis_contig11:328827..329028Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 328828..329028 -
1622815588.2856193-UTR-S-ischiensis_contig11:334010..3341351622815588.2856193-UTR-S-ischiensis_contig11:334010..334135Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 334011..334135 -
1695739787.572022-UTR-S-ischiensis_contig11:334010..3341351695739787.572022-UTR-S-ischiensis_contig11:334010..334135Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 334011..334135 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815588.2398026-CDS-S-ischiensis_contig11:329028..3293821622815588.2398026-CDS-S-ischiensis_contig11:329028..329382Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 329029..329382 -
1695739787.526063-CDS-S-ischiensis_contig11:329028..3293821695739787.526063-CDS-S-ischiensis_contig11:329028..329382Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 329029..329382 -
1622815588.2532506-CDS-S-ischiensis_contig11:330912..3310081622815588.2532506-CDS-S-ischiensis_contig11:330912..331008Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 330913..331008 -
1695739787.537843-CDS-S-ischiensis_contig11:330912..3310081695739787.537843-CDS-S-ischiensis_contig11:330912..331008Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 330913..331008 -
1622815588.2644114-CDS-S-ischiensis_contig11:333099..3332671622815588.2644114-CDS-S-ischiensis_contig11:333099..333267Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 333100..333267 -
1695739787.552122-CDS-S-ischiensis_contig11:333099..3332671695739787.552122-CDS-S-ischiensis_contig11:333099..333267Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 333100..333267 -
1622815588.2758167-CDS-S-ischiensis_contig11:333875..3340101622815588.2758167-CDS-S-ischiensis_contig11:333875..334010Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 333876..334010 -
1695739787.5622919-CDS-S-ischiensis_contig11:333875..3340101695739787.5622919-CDS-S-ischiensis_contig11:333875..334010Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 333876..334010 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig11.2001.1

>prot_S-ischiensis_contig11.2001.1 ID=prot_S-ischiensis_contig11.2001.1|Name=mRNA_S-ischiensis_contig11.2001.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=251bp
MQLVAIATLGFLGCTSAFAPVGMPVTGRATRCGAATPLSMTSGDQPVSRG
EMLGAFAKAAAAAALTGSLPALAEEAAAPAAPAPAPEAPPTDWGMTRSYY
EDAKKMVTHMRYCTNMEKGTPDMDKIATNCRREMTDFVALYRRSTNISGK
LSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLNQVKVLWWLLCRLKKV
ATVTRSCRCCLERPGLLLPSAWARQPRARAFYVKYPRRVVHGLGTTASTT
*
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mRNA from alignment at S-ischiensis_contig11:328828..334135-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig11.2001.1 ID=mRNA_S-ischiensis_contig11.2001.1|Name=mRNA_S-ischiensis_contig11.2001.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=5308bp|location=Sequence derived from alignment at S-ischiensis_contig11:328828..334135- (Schizocladia ischiensis KU_0333)
CCGGGAACAAGAGCCAGCTCAGGGTTACAGGGGGCACCAGCTGCTGCGTG
AGCCCCTAGAGAGGTTGCTCTGTGTGACAGTCTTGCAGCAGCATTTTCAG
TGCTCGAGCGACTGCCCATCGCACCATGCAGCTTGTGGCCATCGCAACGC
TCGGGTTTCTGGGATGCACAAGCGCATTCGCTCCCGTGGGCATGCCCGTA
ACAGGGCGAGCGACACGGTGCGGCGCTGCCACTCCCCTCTCCATGACTAG
CGGTGATCAGGTCCGTTCTCCTCGGACCCATGCGTGGCAGTAGCGAGAAG
GATGCTTGCATGAACCGCCGGCCTCTTCCGCACGTTGCACATACCGCAGC
GTGCTCGCGCATGTTGTTGAAGCATCGGTTGCAACGGCCGGCCGGCGTTG
CACTGTTAGCTGTCACTGCCATTCCCTTGTCTTGCATGCATGATGTCCGC
CGGAGGCGAGCGTCAACTGGCTTGGCGTCTTGGCGGCCCTAAATGCCAGA
CTGCTCTTGGCAACAATGTGTCCAGTGCCTGTCCCTCGTGCGTGTCGCCA
GTCATTGCACATTGTGATGGACACCCATGCAGTGGGCCCTATGGAAGCAG
GACACGTGCGGCCGCCGCCACAGCACCAGCACCTGCAGCAGCGCTCGTCA
TTCGCTCATTCAGGATCACCCCCCCGTTGTCCACCAGCATGCCTGGCCCA
ATGCTCGACTACCCCATTCTTTGCTCTTTCATTGCGTCCGGTCCTTTTCC
CGCCCTTCATATCCCTGAATGCCTATGTCGAGCACCAATTTCTTTCCTCA
TCTCCTTGACCCCTGCCCTGCCAACCCCTTTGGCCCTGACACAAATCGGT
GTTTTTGTCTTCTTGCAGCCAGTATCTCGGGGGGAAATGCTGGGAGCCTT
TGCGAAAGCAGCGGCAGCTGCCGCCCTCACCGGGTCTCTCCCTGCGCTGG
CAGAGGAGGCCGCTGCCCCTGCTGCGCCTGCTCCCGCGCCTGAGGCCCCA
CCAACAGACTGGGGCATGACCCGATCTTATTACGAGGTGCGGCGGCCCCT
CGTGGTGTTTGGATGGGTTATTTGACTCCATACTTCGTATGCGTTCACCA
TTTTGCCGAAACTACTGCTTGTACTGTAATGCCAGCAACTGTTTTGCGCC
ACGGTGTAGGTGAGTGATAGGGTTTCACGAGGGTCTATGGCTCAATGGCT
ACGCCTGACTAGGGGCAAACCTGTCAACGCTTGGGTTTGTCATGTCAGCC
CATGCACACGGCGGCGAATTGCATCGAAAGACGCCTTCCACTTCATGAGC
ACATCTTGTACCTATGTATGTCCGGAAGTGTGAATTGCGGCACGCCAGCA
GTATTTACATTTGAATGTGCTCACATTGCGCTTGCCTCATGTGTAGCCCG
CAGGCCGGTCACTCTTTTCGTTCGGAGTGGTCGTGCCACTTGTCACACTT
ACGGCCAGGTTTTGTTGGGGGGGGGGTGGAGACCCAGTGATTACAAGCTG
GTCCAAACATCTACATCTACAGTCTGAACCCCTGTGATGAACGGACCTGT
CGACTTCCCTATGAGGGCCCCCCCCCCCCCGGTGTGTTTGTTCTTGTGGT
TTGTGAAGGAACCCGATACAGTAGTCACAACCAGCCACTGTGAGTACTCG
TGCGAGTATACACACGCGATGAACAGACCTGTCCACTTGCTGATGAGGGG
TTGCTTGCCGCTCGGGGCAGCGAGGCCCATTTCTTTGTGCCTCATGTACA
CACGTGGGTACTGTACGCATCCACGTGTGCTAGTTAATGCCCACGGCCCG
CCTGAGCGGGCTGGCTTGGCACAGTATTATCTGCAGTCGCTGCTCTGTGC
GGAGCGGCCCAAAGTACGGTTGTAGAGCGTGTGCAGTACGTTAGTACGCG
ATGGCGCGCGCATACTAGTGGTAGATACTTCGAAATACATACAGTAGTAC
TTGTACAAGGTGGTGTATGATGCCGGTGTATCTAAAGTACTTCGAGTACT
TGGAGGGACACCAAGTACAGTACCGCCCAGCACATGCACGTAGCAGGCGC
TGAGAAGCCCCGCAACACAATAGAGCAGAGCGTGCGCTACTTCCGGGTGT
GTGTGTTATGGCCAAGTACCTCCTCAAGTACTTGGTACTAGTGAGCGCAG
TCTTTGACGTGCTTGGCGCTGTATGTAGATAAGAATACTGCAGTAGTACC
TGCAGTCACTTGGAGCAGGGGCTTGTCAACGGACTGCTCACAGCCCAGGC
CGGGCCCTCCTGAAGCACGTCCTTGCGGACCACGTCAGGTCTGGCGAGCT
CGCCCTGAACACCCCCCGCCCTCACCGTACTATTGCCGCTGCTACTTGAA
GCGACGTCATGTACCCAAGTATGACTGTCCTGTAGTGTAGTGACAGGACT
GTACTTGAAGCGGCTCATAGCAATTCTGCCGCGGGACATGCCAGCGGCGG
TAGCTTGAAAATAGGTTTCTGCGCGTGATGTTTCTGTGATCGGCGGCGGC
GGTTACAGCGGCGGCGTACGTAGGCAGGACACATACATTTCAATGTTCTG
TTCTAGTGAGCAGAGGTGGTGCAGTACACTAATCGCACTGCCACGTAATA
AACTTGTTTGGACCTGGATTCGCCTGCGGCGATCAATCGAACTAGGTACA
GGAAAGCCACACCACCCGGTTCATGACTGGTCGCTGGATGGGGTTGCTCC
CCACTCCATTCGACGCCAAGTGGAGCACTCGTACACAGTTACTCGTGCAC
TGTAAGTACCTGCTGTCCCTGTCATTCGTTGATGTTGCGTGTTCTTGCCC
TCCCCCCTCTCCTCTCCTCCTCCTCCTCCTACGCCGCCGCCGCCGCCACC
CTCCTGCCTCTCCTCCTGCTCTCCCCTCCCCCTCCCCAACAACAGAGGAA
GCAGTGCTCCGTCCCGTAGGGTCACCCCTGTAGGACGCGTGGTCAATGAC
CATAGGTATGACTACAGCAGGCAACTCATGAGCAACCCCCCGCTCTTCCT
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCTCCCTGTCTCC
CCCCCCTCCTCCCGCGGCTCCTCTTCACCCCCCTCCTCCCCGGCCCGATG
TTCTGACTACTGTACATCCCCCCACAGGACGCCAAGAAGATGGTGACGCA
CATGCGCTACTGCACCAACATGGAGAAGGGGACTCCTGACATGGACAAGA
TTGCCACCAACTGCCGGAGGGAGGTGTGTTTGTGTGTGTGTGTGTGTGTA
CTCACGTGGTGCTTGCCGTAGTGCCGAGACCACTGACCACGCGCCTCGGT
CAAGACGGAGCAGTGTGTGTGTGTACGCGCCTAAATTATCGGTAAGCTGT
TGCATGGGTTTGACCTTTAGCGTGCAAGCCCCCTTGTGTTACGCAACTTT
TTTTGTGCTGCTTGGACCGTCATTCGCCTTGAGTGTTGAGCTGTGAGCCG
GCGGCGTTTGCGAGACGTTTTCGAGGCCTTTCTCACCAATGGTCGTGCGA
CCAATTCGGTTTCGAACGCATTTCGAGTGCGCTGTCACGGCCGGCCGGTT
TGGCCGGTTTTGTGGCTATGGTAGCCATTACCGGCTTTACGTTAATGCGT
CATTGCACTGGCCATTGCAAAGCCTGAAATATGCACGATCTTGAAGGAGC
AAACACCCGGACACCGCCCCCCCCCGGCCGGTTAATTCGGTTTCCGTTGC
GCTGATTGAACCGAAGCTGACCAAATGTTAAACCCGGCTCAGTCCACAGC
TCTATCAAGTACGTGAACACCTTGGTTGCCGCGCTGCCTTGCCTGTGGAA
CTTAGCTCGTCGCACCATTCCAAGGGTGGTGCCCATTTGACTGCAATTGG
CGGATATAGTACTTGGTGAGTGCGCATGCTGTCACCACCCATGGCGGTAT
GTGGCTTGGCGAGTGTGTGTACTCACGTTGGACGGGGGACACGCCGTCCT
GTGTATGCCACCGCCTAGTATACTACTTGCTAGACCGCCGGCCAGCCCCA
GCACGGCTGCCTTTCAGCCATTGGCCACACGTCCCCATTCCGCCGGGACG
GAGAATGCCCAGTTCTCACCGGCCAGGCGACGGGTTAGGCCCCCGGGACA
ATGGCATTTCTACCATTGTCCCTTGACTCGGCGAGCAAACCGCAGGATTG
GCTGTCATGAGCAGGAAGCGGTGCAACCTTTACATCTTTCTCGCACGTAT
GTTTGTAAAAGGCCCGTTTTTGTGTTTCCGCGGCCCCCAGGTGCGGGATT
CGAAACTGGGACATTCGGGCAATGAACCGGTTCCTGGACCACTCAACTAA
ATGAGAGCTGTAGTCGTAGAGTACTGTAACAACACATGAAGTATGAGTAC
TCATACATGTTTGCACGTGGGTGGGCGCATTTGGCGCTTACTTGTTTCAC
CCGCTTTTTTTCCGCCCTGCCTGCTGGCGGTTTGACCTCTGCATGCAGAT
GACCGACTTTGTGGCGCTCTATCGCCGGTCCACCAACACATCGGTTTGTC
CGCCATTTTCCGCCCTGCCTGCCGGTGGTTGAACTCTGCATGCAGATGAC
CGACTTTGTGGCGCTGTACCGCCGGTCCACCAACACATCGGTTGTGCGCA
TTTGGCGCTTCCTTGTTTCACCCGTTTTCCGCCCCGCCTGCCGGTGGTTT
ATGACCACTGCATGCAGATGACCGATTTTGTGGCGCTCTACCGCCGGTCC
ACCAACATATCGTTTTCTGCCCTGCCTGCCGGCGGCTTGACGTGTGCGTG
CAGATGACCGACTTTGTGGCGCTGTACCGCCGGTCCACCAACATATCGGG
CAAGCTGTCCTACTCCAACCTGTACACCTCCATCAGCGTCTTGGCCGGGC
ACTACGCCAGCTACGGCCCCAAGTTCCCCGTCCCGGAGAAGCGGCGCAAG
CGGCTCAATCAGGTGAAAGTGCTCTGGTGGCTGTTGTGCCGCCTGAAAAA
AGTTGCGACCGTCACACGCAGTTGCCGTTGTTGTTTGGAGCGGCCGGGCC
TCCTCTTACCGAGCGCGTGGGCGCGTCAGCCACGAGCTCGCGCCTTTTAC
GTAAAATACCCGAGGCGCGTGGTCCATGGTCTCGGGACTACGGCAAGCAC
CACGTGAGTACATATATATGAATCCTTGGCAATGAAACATGTTCTCTGCT
ACTAGTCCTTGTTTGGTTTGGTTTTTCGGGGGCGAAACCGTCTCTCTCGA
GCGCCAGATTCTTCAGGCAGCCGGCTGTCTTTGGCTCTCCCGTCCGCACC
TGGCGTTCTACGGCGCGTAGATGAACAAAGTCTTGTCTTTCTTTGCACCA
TACCACTG
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Coding sequence (CDS) from alignment at S-ischiensis_contig11:328828..334135-

>mRNA_S-ischiensis_contig11.2001.1 ID=mRNA_S-ischiensis_contig11.2001.1|Name=mRNA_S-ischiensis_contig11.2001.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1506bp|location=Sequence derived from alignment at S-ischiensis_contig11:328828..334135- (Schizocladia ischiensis KU_0333)
ATGCAGCTTGTGGCCATCGCAACGCTCGGGTTTCTGGGATGCACAAGCGC
ATTCGCTCCCGTGGGCATGCCCGTAACAGGGCGAGCGACACGGTGCGGCG
CTGCCACTCCCCTCTCCATGACTAGCGGTGATCAGATGCAGCTTGTGGCC
ATCGCAACGCTCGGGTTTCTGGGATGCACAAGCGCATTCGCTCCCGTGGG
CATGCCCGTAACAGGGCGAGCGACACGGTGCGGCGCTGCCACTCCCCTCT
CCATGACTAGCGGTGATCAGCCAGTATCTCGGGGGGAAATGCTGGGAGCC
TTTGCGAAAGCAGCGGCAGCTGCCGCCCTCACCGGGTCTCTCCCTGCGCT
GGCAGAGGAGGCCGCTGCCCCTGCTGCGCCTGCTCCCGCGCCTGAGGCCC
CACCAACAGACTGGGGCATGACCCGATCTTATTACGAGCCAGTATCTCGG
GGGGAAATGCTGGGAGCCTTTGCGAAAGCAGCGGCAGCTGCCGCCCTCAC
CGGGTCTCTCCCTGCGCTGGCAGAGGAGGCCGCTGCCCCTGCTGCGCCTG
CTCCCGCGCCTGAGGCCCCACCAACAGACTGGGGCATGACCCGATCTTAT
TACGAGGACGCCAAGAAGATGGTGACGCACATGCGCTACTGCACCAACAT
GGAGAAGGGGACTCCTGACATGGACAAGATTGCCACCAACTGCCGGAGGG
AGGACGCCAAGAAGATGGTGACGCACATGCGCTACTGCACCAACATGGAG
AAGGGGACTCCTGACATGGACAAGATTGCCACCAACTGCCGGAGGGAGAT
GACCGACTTTGTGGCGCTGTACCGCCGGTCCACCAACATATCGGGCAAGC
TGTCCTACTCCAACCTGTACACCTCCATCAGCGTCTTGGCCGGGCACTAC
GCCAGCTACGGCCCCAAGTTCCCCGTCCCGGAGAAGCGGCGCAAGCGGCT
CAATCAGGTGAAAGTGCTCTGGTGGCTGTTGTGCCGCCTGAAAAAAGTTG
CGACCGTCACACGCAGTTGCCGTTGTTGTTTGGAGCGGCCGGGCCTCCTC
TTACCGAGCGCGTGGGCGCGTCAGCCACGAGCTCGCGCCTTTTACGTAAA
ATACCCGAGGCGCGTGGTCCATGGTCTCGGGACTACGGCAAGCACCACGT
GAATGACCGACTTTGTGGCGCTGTACCGCCGGTCCACCAACATATCGGGC
AAGCTGTCCTACTCCAACCTGTACACCTCCATCAGCGTCTTGGCCGGGCA
CTACGCCAGCTACGGCCCCAAGTTCCCCGTCCCGGAGAAGCGGCGCAAGC
GGCTCAATCAGGTGAAAGTGCTCTGGTGGCTGTTGTGCCGCCTGAAAAAA
GTTGCGACCGTCACACGCAGTTGCCGTTGTTGTTTGGAGCGGCCGGGCCT
CCTCTTACCGAGCGCGTGGGCGCGTCAGCCACGAGCTCGCGCCTTTTACG
TAAAATACCCGAGGCGCGTGGTCCATGGTCTCGGGACTACGGCAAGCACC
ACGTGA
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