|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 589 |
| Cds size | 585 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815575.9919326-CDS-S-ischiensis_contig11:270072..270143 | 1622815575.9919326-CDS-S-ischiensis_contig11:270072..270143 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 270073..270143 + |
| 1695739780.2298877-CDS-S-ischiensis_contig11:270072..270143 | 1695739780.2298877-CDS-S-ischiensis_contig11:270072..270143 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 270073..270143 + |
| 1622815576.0083601-CDS-S-ischiensis_contig11:270832..271000 | 1622815576.0083601-CDS-S-ischiensis_contig11:270832..271000 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 270833..271000 + |
| 1695739780.2459056-CDS-S-ischiensis_contig11:270832..271000 | 1695739780.2459056-CDS-S-ischiensis_contig11:270832..271000 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 270833..271000 + |
| 1622815576.0195246-CDS-S-ischiensis_contig11:271245..271591 | 1622815576.0195246-CDS-S-ischiensis_contig11:271245..271591 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 271246..271591 + |
| 1695739780.2554398-CDS-S-ischiensis_contig11:271245..271591 | 1695739780.2554398-CDS-S-ischiensis_contig11:271245..271591 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 271246..271591 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig11.1990.1 >prot_S-ischiensis_contig11.1990.1 ID=prot_S-ischiensis_contig11.1990.1|Name=mRNA_S-ischiensis_contig11.1990.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=195bp
LDSPDDVPLPESAWKSPLRTSLIRYELSPEYQAGGAHGCSASAWDDRRPL
SGASPHAVCGPAGQGLRGEEEEEGGDHSSRLQPESADRLGRESDNPRGFW
GEDSPASPVPLADDDGVAGTGITSSSGRALGTPLAGPAAAASRFADFSGT
GQRGGEQLGGCATPPPSAAAAAAADGGDAECVTPDLASPPRAAGV back to topmRNA from alignment at S-ischiensis_contig11:270073..271593+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig11.1990.1 ID=mRNA_S-ischiensis_contig11.1990.1|Name=mRNA_S-ischiensis_contig11.1990.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1521bp|location=Sequence derived from alignment at S-ischiensis_contig11:270073..271593+ (Schizocladia ischiensis KU_0333)
TTGGACAGCCCGGATGACGTGCCGTTGCCGGAGTCGGCATGGAAGTCGCC
GCTCCGCACGTCCCTCATTAGGTTGGTGGGAGGGAAGCAGGGGGGGGGTG
AGCTTGGCGGGGTgggGGGGGGGAAGGGGCCTTGTCTCTGCGAAACTAGT
GTACGTACGAGTGCGAGTAGTGGTGGTATGTACGTGTCGAGCCGCCCTTG
ATGGTTTGAAGTTCCCGCTGGCGTGGCTTGGTCAGAGGCGATGTGCTTCG
AAGTAACTTGGGTGTTGGAAGCTACGCGCAGTTGTTTGGACGATGTTTCG
CGTTTTCTCTTGCTGTTTGTTGAAACGGTACTGTACTGTAGCAGGTTTTG
CCCAACCCTCACACGGCAATGTCTGTGTGTCTTGATGCGTGCACTGCATG
TACAGTAGTAAAACGCTGGTCCGGCCCCCAGGGGTGCTTGACCCCTCCCG
CCCCTGCCCCTCCACCCCACAGTCACAGACTTTGCCCGGCCGTCCTGACG
ACGATATTTAGCCCCAGTTCGCAGAGGGTACTCTCACCTGCGTTCCATTT
CAACTTACTTCCACTTGTATCCTGTTTTGGTACTACTTCAGTGATGGCTC
ACTTTGTTTTGGCATGCGATTCATACAAATTGTAACGAGGTACAATCGCA
CTTGTGTGAGATGGAATGTTCTTGTATAGTGGTTGTCCTATTGTAGCATT
GTACTCTCCCATTTATAAGTGCTGGTACTTATGAAACCCACTCCCACTAA
CGCCTGCCAGGTACGAGCTCAGCCCAGAGTACCAGGCCGGCGGGGCCCAC
GGCTGCTCTGCATCGGCGTGGGATGATCGCCGGCCTCTCTCGGGCGCGTC
TCCACATGCCGTCTGCGGCCCAGCCGGTCAGGGGCTCAGGGGGGAGGAGG
AGGAGGAGGGCGGTGATCACAGCAGCAGGTGAGTTGTTGAGCGCACGCGA
GAGAGCCCTGCAGTACTTGTACAGTGTACTTCTGGAAGCACTGTGCTGTC
CTGTGCTGGGTACCTACTTTGCGCTTGGCCAGGCGAATGATAGCTCTACA
CCCAAACAGCAGGTGACTCATGAGTGGTACCGGGGAATGATAGCTCTACA
ACCAAACAGCAGGCGACTCATGAGTAGGTACACCCCCCGCCCGACCCCCC
GCCCAACACGGGCATCCTCGCAGGCTGCAGCCGGAATCGGCAGACCGCCT
CGGCCGTGAATCGGACAACCCCCGTGGGTTCTGGGGCGAGGACTCCCCTG
CCTCCCCAGTACCCCTGGCGGATGACGACGGGGTAGCCGGCACGGGCATA
ACCTCCAGCAGTGGGCGTGCGCTCGGCACCCCTCTGGCAGGGCCGGCGGC
AGCAGCGTCAAGGTTTGCCGATTTCTCCGGCACTGGCCAGCGGGGCGGGG
AACAACTGGGAGGGTGCGCCACTCCCCCCCCCTCGGCCGCCGCCGCCGCC
GCCGCCGATGGAGGGGACGCCGAGTGCGTGACGCCGGATTTGGCTTCCCC
GCCTCGAGCGGCAGGCGTGAT back to topCoding sequence (CDS) from alignment at S-ischiensis_contig11:270073..271593+ >mRNA_S-ischiensis_contig11.1990.1 ID=mRNA_S-ischiensis_contig11.1990.1|Name=mRNA_S-ischiensis_contig11.1990.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1170bp|location=Sequence derived from alignment at S-ischiensis_contig11:270073..271593+ (Schizocladia ischiensis KU_0333)
TTGGACAGCCCGGATGACGTGCCGTTGCCGGAGTCGGCATGGAAGTCGCC
GCTCCGCACGTCCCTCATTAGTTGGACAGCCCGGATGACGTGCCGTTGCC
GGAGTCGGCATGGAAGTCGCCGCTCCGCACGTCCCTCATTAGGTACGAGC
TCAGCCCAGAGTACCAGGCCGGCGGGGCCCACGGCTGCTCTGCATCGGCG
TGGGATGATCGCCGGCCTCTCTCGGGCGCGTCTCCACATGCCGTCTGCGG
CCCAGCCGGTCAGGGGCTCAGGGGGGAGGAGGAGGAGGAGGGCGGTGATC
ACAGCAGCAGGTACGAGCTCAGCCCAGAGTACCAGGCCGGCGGGGCCCAC
GGCTGCTCTGCATCGGCGTGGGATGATCGCCGGCCTCTCTCGGGCGCGTC
TCCACATGCCGTCTGCGGCCCAGCCGGTCAGGGGCTCAGGGGGGAGGAGG
AGGAGGAGGGCGGTGATCACAGCAGCAGGCTGCAGCCGGAATCGGCAGAC
CGCCTCGGCCGTGAATCGGACAACCCCCGTGGGTTCTGGGGCGAGGACTC
CCCTGCCTCCCCAGTACCCCTGGCGGATGACGACGGGGTAGCCGGCACGG
GCATAACCTCCAGCAGTGGGCGTGCGCTCGGCACCCCTCTGGCAGGGCCG
GCGGCAGCAGCGTCAAGGTTTGCCGATTTCTCCGGCACTGGCCAGCGGGG
CGGGGAACAACTGGGAGGGTGCGCCACTCCCCCCCCCTCGGCCGCCGCCG
CCGCCGCCGCCGATGGAGGGGACGCCGAGTGCGTGACGCCGGATTTGGCT
TCCCCGCCTCGAGCGGCAGGCGTGGCTGCAGCCGGAATCGGCAGACCGCC
TCGGCCGTGAATCGGACAACCCCCGTGGGTTCTGGGGCGAGGACTCCCCT
GCCTCCCCAGTACCCCTGGCGGATGACGACGGGGTAGCCGGCACGGGCAT
AACCTCCAGCAGTGGGCGTGCGCTCGGCACCCCTCTGGCAGGGCCGGCGG
CAGCAGCGTCAAGGTTTGCCGATTTCTCCGGCACTGGCCAGCGGGGCGGG
GAACAACTGGGAGGGTGCGCCACTCCCCCCCCCTCGGCCGCCGCCGCCGC
CGCCGCCGATGGAGGGGACGCCGAGTGCGTGACGCCGGATTTGGCTTCCC
CGCCTCGAGCGGCAGGCGTG back to top
|