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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 1787 |
| Cds size | 1032 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815581.656375-UTR-S-ischiensis_contig11:131029..131680 | 1622815581.656375-UTR-S-ischiensis_contig11:131029..131680 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig11 131030..131680 + |
| 1695739783.8532894-UTR-S-ischiensis_contig11:131029..131680 | 1695739783.8532894-UTR-S-ischiensis_contig11:131029..131680 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig11 131030..131680 + |
| 1622815581.6900978-UTR-S-ischiensis_contig11:132712..132816 | 1622815581.6900978-UTR-S-ischiensis_contig11:132712..132816 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig11 132713..132816 + |
| 1695739783.871514-UTR-S-ischiensis_contig11:132712..132816 | 1695739783.871514-UTR-S-ischiensis_contig11:132712..132816 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig11 132713..132816 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815581.6753783-CDS-S-ischiensis_contig11:131680..132712 | 1622815581.6753783-CDS-S-ischiensis_contig11:131680..132712 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 131681..132712 + |
| 1695739783.8633535-CDS-S-ischiensis_contig11:131680..132712 | 1695739783.8633535-CDS-S-ischiensis_contig11:131680..132712 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 131681..132712 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig11.1970.1 >prot_S-ischiensis_contig11.1970.1 ID=prot_S-ischiensis_contig11.1970.1|Name=mRNA_S-ischiensis_contig11.1970.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=344bp
MLYVLMYFGDTLPPADTSARGRPQHAAATQAPHSPARLTLPLGRLLVHRK
TWDPPHAHTNHDNLEYARSDEVSRLGACPGPERSSYMPNTPNDTWKYMPN
TPVSLPVWGKAKPRPDASHPLEARADRQKKSKSTRLPRARWWQTGTQSGG
GTSDSPPPSTAHIIVYHPRQSSPRPPRFGASAEAERTGPDCATGRVRALA
LAPAPAPAPHALRRGNRSAHPTHQPYPPLHTRPLHGIGRRVYGLVLYRPA
LASGEPTSRAAGRRRCFESRASSNSEAQARLHDSASGVAYPTPAKTSCVF
TLLRRQYRSTVQLAHECCSAWCLAADTNENLPGACAQHIPQVA* back to topmRNA from alignment at S-ischiensis_contig11:131030..132816+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig11.1970.1 ID=mRNA_S-ischiensis_contig11.1970.1|Name=mRNA_S-ischiensis_contig11.1970.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1787bp|location=Sequence derived from alignment at S-ischiensis_contig11:131030..132816+ (Schizocladia ischiensis KU_0333)
AAGTAATTGAGTTCTTTATAATAGTGACGTGGCCAGCACCTCGCCCTGTT
CCTTTTCTGTTATAATACATACTCGTACTTGGAAGTACTTGAGGAGCACG
GTACAATTCGTTGTCGCCGGAGAGTTAAATACAGTAAGTCGCACGTCTTG
AAGCACGTCTGCTGTGCATGATTGCCCCATTCATGTGCACAAACTTGCCA
GCACCCGAGCAAGTGCGTACTTCAATTACATTTCCTGGCGAGGGGGCCCC
GGTTCTCAAGCGGTGGAACGTCCAGTGGAAGGAGCACAACAAAAGCACAA
GAACGAGATGGACCAATTGGCCGCCAAAAAGACTCTACGGGCACAGCGGC
GGCGGAAGCAGCAGCAACAGCAGTAGAGCTCTACTCCTGTACTGTAGTAG
TACCTCGAAGTAGTATATGTACTCACGTGGTGCTTGCCGTAGTCCCGAGA
CCGTTGACCACGCGCCTCGGTCGAGACGGAGCAGGTACTTCCAGTAGTGG
CCGCAAGGAACTTGTTCGCTCCAGGGACTCTCAAGCTCCGGCGGAGTTCA
AAGACGACTGGCCGTCCTCTCGTTCACCTCAAAAGAAAGGTGACAACCAC
CGAGTACAGCGGTAGCCAGCGCGGGCCTCTTTGGCTCCCTCGACGAAAGC
AATGTTGTATGTACTTATGTACTTTGGTGATACGCTACCGCCCGCAGACA
CAAGCGCGCGAGGTCGCCCACAGCACGCGGCGGCAACACAGGCGCCTCAC
TCACCAGCGCGCCTCACGTTGCCACTGGGGAGACTACTCGTACACCGGAA
AACATGGGATCCTCCACACGCGCACACAAATCACGATAACCTGGAGTACG
CACGTTCGGACGAGGTTTCTCGTCTCGGTGCATGCCCTGGACCCGAACGA
TCCTCATACATGCCAAATACACCAAATGATACCTGGAAGTACATGCCAAA
TACACCAGTGTCGCTGCCAGTTTGGGGCAAGGCCAAGCCAAGGCCGGACG
CCTCCCATCCCCTGGAGGCGAGAGCGGACAGGCAAAAAAAGTCCAAATCA
ACACGCCTGCCACGAGCGCGCTGGTGGCAGACAGGAACACAGAGCGGCGG
TGGCACTTCCGACTCCCCACCGCCATCCACAGCACATATCATTGTATACC
ACCCCCGGCAGTCTAGTCCACGCCCGCCCCGCTTCGGCGCTTCAGCAGAA
GCAGAGAGGACGGGCCCAGACTGTGCCACAGGGCGGGTCCGTGCTCTGGC
CCTGGCGCCGGCTCCGGCCCCGGCACCACATGCTTTGCGCCGGGGCAATC
GTAGCGCCCACCCGACCCACCAACCCTATCCCCCCCTACACACGCGCCCC
CTCCACGGGATCGGAAGGCGCGTCTATGGACTTGTGTTGTACCGTCCCGC
CCTTGCCAGCGGCGAACCGACCAGCCGCGCGGCTGGCCGGCGCCGCTGTT
TCGAATCGAGAGCCTCGTCAAATAGTGAGGCGCAGGCGCGTCTCCACGAC
TCCGCCAGCGGTGTCGCCTACCCTACCCCTGCAAAAACCTCATGTGTTTT
TACTCTGTTGCGCAGACAGTACCGTAGTACAGTACAGCTAGCACACGAGT
GCTGCAGTGCTTGGTGTCTTGCCGCAGACACAAATGAAAACTTGCCGGGC
GCATGTGCACAACATATACCACAAGTAGCATGAATCAGTAAGTACATATA
CATTGAATACACAAGGTGTGCGCGCCGGCCGGCCCTACTGCCGGCACGGC
GCCGGGGACTCAGGCTGCCGCTTGCCGAGGGGGTCAG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig11:131030..132816+ >mRNA_S-ischiensis_contig11.1970.1 ID=mRNA_S-ischiensis_contig11.1970.1|Name=mRNA_S-ischiensis_contig11.1970.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2064bp|location=Sequence derived from alignment at S-ischiensis_contig11:131030..132816+ (Schizocladia ischiensis KU_0333)
ATGTTGTATGTACTTATGTACTTTGGTGATACGCTACCGCCCGCAGACAC
AAGCGCGCGAGGTCGCCCACAGCACGCGGCGGCAACACAGGCGCCTCACT
CACCAGCGCGCCTCACGTTGCCACTGGGGAGACTACTCGTACACCGGAAA
ACATGGGATCCTCCACACGCGCACACAAATCACGATAACCTGGAGTACGC
ACGTTCGGACGAGGTTTCTCGTCTCGGTGCATGCCCTGGACCCGAACGAT
CCTCATACATGCCAAATACACCAAATGATACCTGGAAGTACATGCCAAAT
ACACCAGTGTCGCTGCCAGTTTGGGGCAAGGCCAAGCCAAGGCCGGACGC
CTCCCATCCCCTGGAGGCGAGAGCGGACAGGCAAAAAAAGTCCAAATCAA
CACGCCTGCCACGAGCGCGCTGGTGGCAGACAGGAACACAGAGCGGCGGT
GGCACTTCCGACTCCCCACCGCCATCCACAGCACATATCATTGTATACCA
CCCCCGGCAGTCTAGTCCACGCCCGCCCCGCTTCGGCGCTTCAGCAGAAG
CAGAGAGGACGGGCCCAGACTGTGCCACAGGGCGGGTCCGTGCTCTGGCC
CTGGCGCCGGCTCCGGCCCCGGCACCACATGCTTTGCGCCGGGGCAATCG
TAGCGCCCACCCGACCCACCAACCCTATCCCCCCCTACACACGCGCCCCC
TCCACGGGATCGGAAGGCGCGTCTATGGACTTGTGTTGTACCGTCCCGCC
CTTGCCAGCGGCGAACCGACCAGCCGCGCGGCTGGCCGGCGCCGCTGTTT
CGAATCGAGAGCCTCGTCAAATAGTGAGGCGCAGGCGCGTCTCCACGACT
CCGCCAGCGGTGTCGCCTACCCTACCCCTGCAAAAACCTCATGTGTTTTT
ACTCTGTTGCGCAGACAGTACCGTAGTACAGTACAGCTAGCACACGAGTG
CTGCAGTGCTTGGTGTCTTGCCGCAGACACAAATGAAAACTTGCCGGGCG
CATGTGCACAACATATACCACAAGTAGCATGAATGTTGTATGTACTTATG
TACTTTGGTGATACGCTACCGCCCGCAGACACAAGCGCGCGAGGTCGCCC
ACAGCACGCGGCGGCAACACAGGCGCCTCACTCACCAGCGCGCCTCACGT
TGCCACTGGGGAGACTACTCGTACACCGGAAAACATGGGATCCTCCACAC
GCGCACACAAATCACGATAACCTGGAGTACGCACGTTCGGACGAGGTTTC
TCGTCTCGGTGCATGCCCTGGACCCGAACGATCCTCATACATGCCAAATA
CACCAAATGATACCTGGAAGTACATGCCAAATACACCAGTGTCGCTGCCA
GTTTGGGGCAAGGCCAAGCCAAGGCCGGACGCCTCCCATCCCCTGGAGGC
GAGAGCGGACAGGCAAAAAAAGTCCAAATCAACACGCCTGCCACGAGCGC
GCTGGTGGCAGACAGGAACACAGAGCGGCGGTGGCACTTCCGACTCCCCA
CCGCCATCCACAGCACATATCATTGTATACCACCCCCGGCAGTCTAGTCC
ACGCCCGCCCCGCTTCGGCGCTTCAGCAGAAGCAGAGAGGACGGGCCCAG
ACTGTGCCACAGGGCGGGTCCGTGCTCTGGCCCTGGCGCCGGCTCCGGCC
CCGGCACCACATGCTTTGCGCCGGGGCAATCGTAGCGCCCACCCGACCCA
CCAACCCTATCCCCCCCTACACACGCGCCCCCTCCACGGGATCGGAAGGC
GCGTCTATGGACTTGTGTTGTACCGTCCCGCCCTTGCCAGCGGCGAACCG
ACCAGCCGCGCGGCTGGCCGGCGCCGCTGTTTCGAATCGAGAGCCTCGTC
AAATAGTGAGGCGCAGGCGCGTCTCCACGACTCCGCCAGCGGTGTCGCCT
ACCCTACCCCTGCAAAAACCTCATGTGTTTTTACTCTGTTGCGCAGACAG
TACCGTAGTACAGTACAGCTAGCACACGAGTGCTGCAGTGCTTGGTGTCT
TGCCGCAGACACAAATGAAAACTTGCCGGGCGCATGTGCACAACATATAC
CACAAGTAGCATGA back to top
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