mRNA_S-ischiensis_contig109.1942.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig109.1942.1 vs. uniprot
Match: D8LBF3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBF3_ECTSI) HSP 1 Score: 337 bits (863), Expect = 1.830e-110 Identity = 197/350 (56.29%), Postives = 234/350 (66.86%), Query Frame = 1
Query: 13 DVDSLMRDLDNVLIDDQDPHRAFDLGGGGVGGEGAPDSFDASQLQAPNANDFSNARLIEELETRKMRPTGFRDQDVITLQRVLDEEFELEKENLIKQQREKKEQAAKQAGLQRKRMMLERQLKEEKAEIEKDHRVEFWLSLVKQNATPPAARIEVNSITARALAKSMWTNSSLTCLDLSRTGLDDFAGAYVARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLTRIRQGEDTSGFTAFAAMLEANKTLTSVNLWRCALGPQAGAALAKGMESNHYLTFLETGHNGLTLMDQQSLTAKLEDNVRRFEEQAALKREEQAAADKVVLEQKTIQEQLR 1062
D D+ M D + L D DP+ A ++ DAS LQAPNANDFSNARLIEELE R R +GFRDQDV+TLQ++LD EFELEKE++IK QREK+EQAAKQAGLQRKRMMLERQL+EE +EI KD R+EFWL+LVKQNATPP ARI+VNS+TARALAKSMWTN+SLT LDLSR G+DD AG YVARLLK LT G + SG A M N TLTSVNLWRCALG +AG AL++GMESNH +TFLE G NGL + DQ + LE+N +RFEE A++R+E + ADK++ E+K +QEQLR
Sbjct: 3 DNDAFMEDYGDSLNDAGDPYETKTT-------RNAAEALDAS-LQAPNANDFSNARLIEELENRNSRVSGFRDQDVVTLQKILDAEFELEKESIIKHQREKREQAAKQAGLQRKRMMLERQLREEISEIGKDQRIEFWLNLVKQNATPPTARIDVNSVTARALAKSMWTNTSLTSLDLSRNGIDDAAGTYVARLLKRNTALVNVALGSNQLGVFACRAFGESLCSNSTLKCLSLESNSLTS--DGANMSGIQALTDMFSKNSTLTSVNLWRCALGAEAGVALSRGMESNHTITFLEVGLNGLAMADQHKVKTALENNFKRFEECQAVRRQELSIADKILAEEKAMQEQLR 342
BLAST of mRNA_S-ischiensis_contig109.1942.1 vs. uniprot
Match: A0A835YIK2_9STRA (Leucine rich repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIK2_9STRA) HSP 1 Score: 298 bits (763), Expect = 4.010e-95 Identity = 232/385 (60.26%), Postives = 286/385 (74.29%), Query Frame = 1
Query: 1 MALDDVDSLMRDLDNVLIDDQDPHRAFDLGGGGVGGEGAP-DSFDASQLQAPNANDFSNARLIEELETRKMRPTGFRDQDVITLQRVLDEEFELEKENLIKQQREKKEQAAKQAGLQRKRMMLERQLKEEKAEIEKDHRVEFWLSLVKQNATPPAARIEVNSITARALAKSMWTNSSLTCLDLSRTGLDDFAGAYVARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLTRIRQGEDTSGFTAFAAMLEANKTLTSVNLWRCALGPQAGAALAKGMESNHYLTFLETGHNGLTLMDQQSLTAKLEDNVRRFE---EQAALKREEQAAADKVVLEQKTIQEQLRKERALREWLEEQKQLRAEERRQEQEKR 1143
MA ++ D+L+ LD+ LIDD+D + + +G +P ++FD SQLQAPNANDFSNARLIEELE R+MRPTGFRDQD+I LQ+VLD EFE EKE+LI+Q EKKEQA K+AGLQR+R LE+QL EEK E+ ++ V WLSLVKQ+ TP ARIEVNSI+ARALAK+MWTN+SLT LDL+R LDDFAGAY XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LT +GE +GF L N LTS+NLWRC LG AG LA G+++N +TFLE G+N L L D + + A+++DN ++ +QA K+ EQ D+++ E+K Q+ LRKER L +WLE Q+ LRAEERR E+E+R
Sbjct: 1 MAANEADTLLHVLDDDLIDDEDRQQDIEST---LGDRKSPGETFDTSQLQAPNANDFSNARLIEELEGRRMRPTGFRDQDIIALQKVLDAEFEQEKEHLIRQHNEKKEQAMKEAGLQRRRAQLEKQLTEEKQEVAQNKIVAGWLSLVKQDETPLTARIEVNSISARALAKAMWTNTSLTSLDLARNNLDDFAGAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTN--EGEKPAGFRYMVQALSKNAALTSLNLWRCGLGTPAGHDLAAGIQANRTITFLELGNNSLALSDLRQIGARVKDNRCHYDALQQQAMAKQREQ---DRILQEEKKAQDLLRKERELHDWLEAQRLLRAEERRAEEEER 377
BLAST of mRNA_S-ischiensis_contig109.1942.1 vs. uniprot
Match: A0A7S3XPA2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPA2_HETAK) HSP 1 Score: 175 bits (444), Expect = 3.060e-47 Identity = 175/374 (46.79%), Postives = 227/374 (60.70%), Query Frame = 1
Query: 19 DSLMRDLDNVLIDDQDPHRAFDLGGGGVGGEGAPDSFDASQLQAPNANDFSNARLIEELETRKMRPTGFRDQDVITLQRVLDEEFELEKENLIKQQREKKEQAAKQAGLQRKRMMLERQLKEEKAEIEKDHRVEFWLSLVKQNATPPAARIEVNSITARALAKSMWTNSSLTCLDLSRTGLDDFAGAYVARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLTRIRQGEDTSGFTAFAAMLEANKTLTSVNLWRCALGPQAGAALAKGMESNHYLTFLETGHNGLTLMDQQSLTAKLEDN------VRRFEEQAALKREEQAAADKVVLEQKTIQEQLRKERALREWLEEQKQLRAEER 1122
D++ ++ +++L DP D+ G G D D Q +A +N L ELE R +P GF D LQ+ D E E +K++ E++E+ A QAGL R++ ++E+QLKEE I++D R E WL+LV+ +ATPP AR+E+ S+ AR LAK++W N SL LDLSR GLDD AGA+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LT E T G FA ML+ N TLTS+NL+RC LGP+AG L G+E N L FL+ G N + K+++N ++ +QAA KR ++ A E +KER ++WLEEQKQ RAEER
Sbjct: 7 DAVNKEFEDLLDHFADPDDEIDITA--FGATGTTDLMDLQDSQPRDALRLTNDELNAELEMRGEKPKGFFTDDAKVLQKYFDVEHEEYLAKQMKERAEQQEKLAAQAGLIRRKRLVEKQLKEELLAIQRDRRAEHWLALVRGDATPPQARVELGSVAARCLAKALWGNGSLVSLDLSRNGLDDKAGAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTESGLAEKT-GAPEFADMLKHNNTLTSLNLFRCHLGPEAGTELLGGLEQNASLVFLDVGGNHFLQSHDARINGKIQENQSLRADLKSQAKQAAEKRSKEEA------EXXXXXXXXQKERDTKQWLEEQKQKRAEER 371
BLAST of mRNA_S-ischiensis_contig109.1942.1 vs. uniprot
Match: F0Y577_AURAN (F-box domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y577_AURAN) HSP 1 Score: 177 bits (449), Expect = 1.370e-45 Identity = 169/361 (46.81%), Postives = 225/361 (62.33%), Query Frame = 1
Query: 82 DLGGGGVGGEGAPDSFDASQLQAPNANDFSNARLIEELETRKMRPTGFRDQDVITLQRVLDEEFELEKENLIKQQREKKEQAAKQAGLQRKRMMLERQLKEEKAEIEKDHRVEFWLSLVKQNATPPAARIEVNSITARALAKSMWTNSSLTCLDLSRTGLDDFAGAYVARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLTRIRQGEDTSGFTAFAAMLEANKTLTSVNLWRCALGPQAGAALAKGMESNHYLTFLETGHNGLTLMDQQSLTAKLEDNVRRFEEQAALKREEQAAADKVVLEQKTIQEQLRKE--------------RALREWLEEQKQLRAEER 1122
D G G DS D + L+ +A L+ E+E R + P GF + D LQ+ D+E E E + +++RE+++++ +A LQ+KR+ LE+QL+EE+ + D ++E WLS+V+ + T P+ARI VNS+TARALAK+MW N SLT LDLSR L DFAGA + R+LK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T + D +G A A L +N +LT +NLWRC LG AGA LAK + N + L+ G+NG+ + D++ + K++ N K+E +A A L+ QEQLRKE R L EW++ QK LRA ER
Sbjct: 19 DADDGDENGREREDSIDLADLKPMDAFLMKMEDLVTEMERRHLHPKGFFNDDAKELQKYFDQEHFKELEKIKEERREQRQRSXMKAQLQKKRLQLEKQLREEQDAVANDPQIEAWLSVVRSDQTRPSARIGVNSVTARALAKAMWNNKSLTSLDLSRNDLSDFAGAQIGRMLKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTN--ESTDQTGVVALAQALSSNASLTLLNLWRCDLGTTAGAELAKALHLNSSIINLDVGNNGVLVADKRRIADKVDAN----------KKETRAIA----LQNHAFQEQLRKEAAGRQAIADEEQKARELEEWMDAQKDLRAAER 363
BLAST of mRNA_S-ischiensis_contig109.1942.1 vs. uniprot
Match: A0A7S3ZT07_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZT07_9STRA) HSP 1 Score: 162 bits (409), Expect = 2.670e-42 Identity = 143/309 (46.28%), Postives = 191/309 (61.81%), Query Frame = 1
Query: 112 GAPDSFDASQLQAPNANDFSNARLIEELETRKMRPTGFRDQDVITLQRVLDEEFELEKENLIKQQREKKEQAAKQAGLQRKRMMLERQLKEEKAEIEKDHRVEFWLSLVKQNATPPAARIEVNSITARALAKSMWTNSSLTCLDLSRTGLDDFAGAYVARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLTRIRQGEDTSGFTAFAAMLEANKTLTSVNLWRCALGPQAGAALAKGMESNHYLTFLETGHNGLTLMDQQSLTAKLEDNVRRFEEQAALKREEQAAADKVVLEQ 1038
G D D S ++ +A + L+ E E R M P GF + D LQ+VLD+EF E L ++R ++ +A LQ+KR+ LE+QL+EE+ I + WL+ +K N T A RIE +SI RALAK++W++SS+TCLDLSR GL DFAGA + R+LK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LT + D +G A A L +N TLT +N+WRC LG AGAA+A + +N L + GH G+ +D Q + ++ N R E A + E+A D++ E+
Sbjct: 28 GGDDDLDFSDMKPMDAFEMKMEDLVVEFERRGMHPKGFFNDDARELQKVLDKEFSENLEKLKAEKRAALQRNRMKAKLQKKRLQLEKQLREEQDAIHDSLDAKAWLNTIKNNQTRDACRIECDSIVCRALAKALWSSSSITCLDLSRNGLSDFAGAQLGRMLKRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNMETNPLTN--ESTDQTGVVALAKALGSNTTLTRLNMWRCDLGTAAGAAIADALVANETLIDFDVGHGGILELDAQRIADRIAHNKR---ETKAKNKREKAYRDQLAREE 331
BLAST of mRNA_S-ischiensis_contig109.1942.1 vs. uniprot
Match: A0A6H5JI07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI07_9PHAE) HSP 1 Score: 154 bits (388), Expect = 3.070e-42 Identity = 91/142 (64.08%), Postives = 106/142 (74.65%), Query Frame = 1
Query: 13 DVDSLMRDLDNVLIDDQDPHRAFDLGGGGVGGEGAPDSFDASQLQAPNANDFSNARLIEELETRKMRPTGFRDQDVITLQRVLDEEFELEKENLIKQQREKKEQAAKQAGLQRKRMMLERQLKEEKAEIEKDHRVEFWLSLV 438
D D+ M D + L D DP+ A ++ DAS LQAPNANDFSNARLIEELE R R +GFRDQDV+TLQ++LD EFELEKE++IK QREK+EQAAKQAGLQRKRMMLERQL+EE +EI KD R+EFWL LV
Sbjct: 3 DNDAFMEDYGDSLNDAGDPYEPKTT-------RNAAEALDAS-LQAPNANDFSNARLIEELENRNSRVSGFRDQDVVTLQKILDAEFELEKESIIKHQREKREQAAKQAGLQRKRMMLERQLREEISEIGKDQRIEFWLHLV 136
BLAST of mRNA_S-ischiensis_contig109.1942.1 vs. uniprot
Match: A0A7R9VZE3_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VZE3_9STRA) HSP 1 Score: 150 bits (379), Expect = 1.100e-38 Identity = 97/267 (36.33%), Postives = 140/267 (52.43%), Query Frame = 1
Query: 154 NANDFSNARLIEELETRKMRPTGFRDQDVITLQRVLDEEFELEKENLIKQQREKKEQAAKQAGLQRKRMMLERQLKEEKAEIEKDHRVEFWLSLVKQNATPPAARIEVNSITARALAKSMWTNSSLTCLDLSRTGLDDFAGAYVARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLTRIRQGEDTSGFTAFAAMLEANKTLTSVNLWRCALGPQAGAALAKGMESNHYLTFLETGHNGLTLMDQQSLTAKL 954
+AN + L++ELE R ++ GF D LQ DEE EL E +++RE +E AK+A QR+R+++E +++EE+ EI +D R++ WL L ++ PP +RIEVN+I+AR+LAK++ T+SS+ CLD+S GL D AGAY+ R L+ LT + D SG A A ML NK L ++LWRC G +G A+A M N LT +E G+NG + AKL
Sbjct: 49 DANALTLNELVQELEKRGLQARGFFADDAKVLQEKFDEEHELYVEAKRREKREAREADAKRAAEQRRRLLMETEVREEREEIGRDRRMKSWLLLTEEGMAPPHSRIEVNNISARSLAKALLTDSSILCLDVSNLGLSDLAGAYLCRALRSNRTLIKIELGSNKFGPKTCKSLGDALTSNNVVRFVSLESNPLTG--EKNDISGIIAIAEMLSKNKALRYLSLWRCGTGADSGKAIADAMAFNDALTCIEVGYNGWENSHTSHVAAKL 313
BLAST of mRNA_S-ischiensis_contig109.1942.1 vs. uniprot
Match: A0A482S097_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S097_9ARCH) HSP 1 Score: 141 bits (356), Expect = 3.030e-35 Identity = 136/290 (46.90%), Postives = 191/290 (65.86%), Query Frame = 1
Query: 247 LQRVLDEEFELEKENLIKQQREKKEQAAKQAGLQRKRMMLERQLKEEKAEIEKDHRVEFWLSLVKQNATPPAARIEVNSITARALAKSMWTNSSLTCLDLSRTGLDDFAGAYVARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLTRIRQGEDTSGFTAFAAMLEANKTLTSVNLWRCALGPQAGAALAKGMESNHYLTFLETGHNGLTLMDQQSLTAKLEDNVRRFEEQAALKREEQAAADKVVLEQKTIQEQLRKERALREWLEEQKQLRAE 1116
LQR +EEF+ E E ++RE+ + A+Q GL+++R+ +ER L+EE+ E+ ++H++ + ++K+N + RI V S++AR+LAK+MW N ++TCLDLS L D AG Y+AR+LK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX I D SG T+ A L+ NKT+TS+NLWR + G LA +E N L F +TGHN + + D + +T KL+ N+ +FE ++R + + Q KE L++WLEE++ R+E
Sbjct: 2 LQRAFEEEFKSELEQRRAKRREQLRKDAQQRGLRQRRLDMERSLQEEQDELARNHQIGMMIDMIKENMMGTSLRINVTSVSARSLAKAMWINDTITCLDLSSNDLSDHAGCYLARILKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP---IASESDLSGLTSLANALKMNKTITSLNLWRTNIPEAGGNILASALEVNETLLFCDTGHNFIEIGDVKKITDKLDANLAQFEANERVRRRHEEVRGQQRXXXXXXXSQRSKEVELKKWLEERRDHRSE 288
BLAST of mRNA_S-ischiensis_contig109.1942.1 vs. uniprot
Match: A0A7S3GWT9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GWT9_9STRA) HSP 1 Score: 133 bits (335), Expect = 5.810e-33 Identity = 125/237 (52.74%), Postives = 168/237 (70.89%), Query Frame = 1
Query: 124 SFDASQLQAPNANDFSNARLIEELETRKMRPTGFRDQDVITLQRVLDEEFELEKENLIKQQREKKEQAAKQAGLQRKRMMLERQLKEEKAEIEKDHRVEFWLSLVKQNATPPAARIEVNSITARALAKSMWTNSSLTCLDLSRTGLDDFAGAYVARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLTRIRQGEDTSGFTAFAAMLEANKTLTSVNLWRCAL 834
SF +Q +ND + EL+ R ++ TGF D D LQRV DEEF+ + E++ +++EK+ +AA+Q GLQR+RM++E+ L+EE+ E+ K+H++ + +K NAT + RIEVNS++AR+LAK+MW N ++TCLDLS L+D AG Y+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ+ +D +G A A + N TLTS+NLWRC +
Sbjct: 35 SFRPAQASLLTSND-----IYYELDKRSLKTTGFPDTDREILQRVFDEEFKADLEDMRARRKEKQRKAAQQLGLQRRRMLMEKTLQEEQDELAKNHQIGLMIEHIKDNATTTSLRIEVNSVSARSLAKAMWVNDTITCLDLSSIDLNDHAGCYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIATY---QDMNGLKALADGIRINTTLTSLNLWRCGI 263
BLAST of mRNA_S-ischiensis_contig109.1942.1 vs. uniprot
Match: B8C189_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C189_THAPS) HSP 1 Score: 109 bits (273), Expect = 2.230e-23 Identity = 80/272 (29.41%), Postives = 130/272 (47.79%), Query Frame = 1
Query: 154 NANDFSNARLIEELETRKMRPTGFRDQDVITLQRVLDEEFELEKENLIKQQREK----KEQAAKQAGLQRKRMMLERQLKEEKAEIEKDHRVEFWLSLVKQNATPPAARIEVNSITARALAKSMWTNSSLTCLDLSRTGLDDFAGAYVARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLTRIRQGEDTSG-FTAFAAMLEANKTLTSVNLWRCALGPQAGAALAKGMESNHYLTFLETGHNGLTLMDQQSLTAKL 954
+A + ++ ELE + ++P GF D +QR D+E E +K +R + K AKQ +RK +LE+++ +EK I D ++ W +L+ + P RI++N I++RALAK++W+NS + LD+S L D AGAY++R L+ L + +DT + F++ LE+N LTS++LWRC LG +AG L+ + N L +E G+N D +T +L
Sbjct: 82 DATSLTLTDILTELERKGIQPIGFYSDDAKRVQRCFDQEHE----EYVKDKRNEALAAKVYEAKQQAERRKAALLEQEIVDEKKAISNDLQLLSWFNLLSTQSCPRHCRIDINDISSRALAKALWSNSRIQSLDVSNMHLSDLAGAYLSRSLQNNICLVKLELGGNAFGSKTLRSLADSLFVNRTLQFLSLESNPLAK----DDTRECISLFSSALESNTRLTSLSLWRCGLGLEAGRMLSNSISKNSSLIIVEVGYNTFDSSDINIMTKQL 345 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig109.1942.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig109.1942.1 >prot_S-ischiensis_contig109.1942.1 ID=prot_S-ischiensis_contig109.1942.1|Name=mRNA_S-ischiensis_contig109.1942.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=382bp MALDDVDSLMRDLDNVLIDDQDPHRAFDLGGGGVGGEGAPDSFDASQLQAback to top mRNA from alignment at S-ischiensis_contig109:85593..88071+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig109.1942.1 ID=mRNA_S-ischiensis_contig109.1942.1|Name=mRNA_S-ischiensis_contig109.1942.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2479bp|location=Sequence derived from alignment at S-ischiensis_contig109:85593..88071+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig109:85593..88071+ >mRNA_S-ischiensis_contig109.1942.1 ID=mRNA_S-ischiensis_contig109.1942.1|Name=mRNA_S-ischiensis_contig109.1942.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2292bp|location=Sequence derived from alignment at S-ischiensis_contig109:85593..88071+ (Schizocladia ischiensis KU_0333)back to top |