mRNA_S-ischiensis_contig109.1941.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig109.1941.1 vs. uniprot
Match: D8LBF2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBF2_ECTSI) HSP 1 Score: 226 bits (577), Expect = 6.550e-72 Identity = 104/211 (49.29%), Postives = 141/211 (66.82%), Query Frame = 1
Query: 1 FPLQFSAKLEVTAHLVDRTKPYPPWLRRMELNYDHSSSKAKIIITEGFGAGKTYIRHYSDKREYMIREGEFPTCRRSYLGEAMPLPELPPMAVFQGMVKLDDEPNTLCQHWLHQSPTSRVHVFVDHVRQVPRRLVDEAVIQTSASNGGDADVRVDQVEVVPLTTYDLLEVKIGQQEQGVFELPQGYTTLD-CDLHVGGFPYLHLFHDYLRV 630
FP FSA+++VT+H+VDR K YPPW+R M++ YD ++ +AK+++T+G AGKT++R Y KREYMIR+GE+P CRRSYLGE MP PELP A F+ M L+ +C+HW+ SRVH+++D Q PRRL +E V + + + VPL TYD +++ I Q +F LP+ Y + CDLHVGGFPYLHLFH YLRV
Sbjct: 30 FPQHFSARVQVTSHMVDRAKGYPPWIREMDVAYDRAAGRAKVVVTKGLNAGKTFLRLYGSKREYMIRDGEYPACRRSYLGEEMPTPELPRTASFKDMQVLE---GLMCEHWVQDDGVSRVHIYIDSATQAPRRLTEETVREDTTA--------------VPLVTYDFMDLNIAPQAPELFLLPEPYIPREACDLHVGGFPYLHLFHHYLRV 223
BLAST of mRNA_S-ischiensis_contig109.1941.1 vs. uniprot
Match: A0A7S2S2S3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2S3_9STRA) HSP 1 Score: 206 bits (524), Expect = 9.160e-64 Identity = 101/213 (47.42%), Postives = 137/213 (64.32%), Query Frame = 1
Query: 1 FPLQFSAKLEVTAHLVDRTKPYPPWLRRMELNYDHSSSKAKIIITEGFGAGKTYIRHYSDKREYMIREGEFPTCRRSYLGEAMPLPELPPMAVFQGMVKLDDEPNTLCQHWLHQSPTSRVHVFVD-HVRQVPRRLVDEAVIQTSASNGGDADVRVDQVEVVPLTTYDLLEVKIG--QQEQGVFELPQGYTTLDCDLHVGGFPYLHLFHDYLRV 630
FP QFSA +E TAHLVD++K YPPW + L YD++ +A+ ++TEG GKT+IR Y +K EYMIR GE+P C+R+YLGEAMPLP P FQGM ++ T C+HW+H T+RVH++V+ H ++PRRL DEAV++ E VPL TYDL E+ +G + E + +P+ + C +GGFPYLHLFH YLR+
Sbjct: 37 FPRQFSATVETTAHLVDQSKDYPPWRGVIHLEYDYTRLRARAVVTEGLDKGKTFIRRYDNKTEYMIRSGEYPECQRAYLGEAMPLPGFPKGLNFQGMEAVE---GTECEHWMHDVGTNRVHIYVEAHGARLPRRLTDEAVMEG---------------ESVPLMTYDLRELHVGGSEVEDATYGIPEPFHYRACTRQIGGFPYLHLFHWYLRI 231
BLAST of mRNA_S-ischiensis_contig109.1941.1 vs. uniprot
Match: A0A836CLG6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLG6_9STRA) HSP 1 Score: 183 bits (465), Expect = 2.790e-55 Identity = 90/206 (43.69%), Postives = 123/206 (59.71%), Query Frame = 1
Query: 13 FSAKLEVTAHLVDRTKPYPPWLRRMELNYDHSSSKAKIIITEGFGAGKTYIRHYSDKREYMIREGEFPTCRRSYLGEAMPLPELPPMAVFQGMVKLDDEPNTLCQHWLHQS-PTSRVHVFVDHVRQVPRRLVDEAVIQTSASNGGDADVRVDQVEVVPLTTYDLLEVKIGQQEQGVFELPQGYTTLDCDLHVGGFPYLHLFHDYLR 627
FSA + A VD + YPP L RM + YDHS+ A + I G AGKTYIR Y+ KR+Y++ GE+P CRRSYLG+ MP+P LP A QG V +D T+ QHW + SR+H+++D +PRR+V+E ++ A+ PL TYD+ V +G Q+ FELP YT C+L++GGFPY+H FH +LR
Sbjct: 7 FSATITTLARTVDHAQRYPPALGRMRIRYDHSAGLAVVAIEAGVEAGKTYIRQYNQKRDYLVIGGEYPLCRRSYLGDPMPMPALPTQAKLQGSVFID---GTMYQHWQQEDLGGSRIHLYIDSATSLPRRVVEEVAVRDGAALPA------------PLMTYDMSNVVLGPQDPASFELPAPYTHDTCELYIGGFPYIHAFHHFLR 197
BLAST of mRNA_S-ischiensis_contig109.1941.1 vs. uniprot
Match: A0A225W5A4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W5A4_9STRA) HSP 1 Score: 177 bits (449), Expect = 1.170e-52 Identity = 82/208 (39.42%), Postives = 119/208 (57.21%), Query Frame = 1
Query: 4 PLQFSAKLEVTAHLVDRTKPYPPWLRRMELNYDHSSSKAKIIITEGFGAGKTYIRHYSDKREYMIREGEFPTCRRSYLGEAMPLPELPPMAVFQGMVKLDDEPNTLCQHWLHQSPTSRVHVFVDHVRQVPRRLVDEAVIQTSASNGGDADVRVDQVEVVPLTTYDLLEVKIGQQEQGVFELPQGYTTLDCDLHVGGFPYLHLFHDYLR 627
P F A+++V +HL D + YPP + RM++ YD A+ + G+ AGKT++R Y K+E+M++ GEF C R+YLG+AMP+PE+P Q V ++ +C+HW+H RVHV+ D VP RL +E V+ + L TYDLL V++G Q F +P GY DC+ +VGGFPY+H FH YL+
Sbjct: 23 PRHFEAEVQVLSHLTDPRQEYPPSMGRMKVQYDFDQQLARAEVLAGYNAGKTFVRRYDQKQEFMVKSGEFRKCERAYLGDAMPVPEIP---FTQEFVAIESVRGKICEHWVHTHENGRVHVYSDVATNVPIRLTEETVVDEQPTM---------------LLTYDLLNVRVGPQNISSFVIPDGYERSDCERNVGGFPYIHAFHYYLK 212
BLAST of mRNA_S-ischiensis_contig109.1941.1 vs. uniprot
Match: G4YTX0_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YTX0_PHYSP) HSP 1 Score: 174 bits (442), Expect = 1.600e-51 Identity = 84/208 (40.38%), Postives = 119/208 (57.21%), Query Frame = 1
Query: 4 PLQFSAKLEVTAHLVDRTKPYPPWLRRMELNYDHSSSKAKIIITEGFGAGKTYIRHYSDKREYMIREGEFPTCRRSYLGEAMPLPELPPMAVFQGMVKLDDEPNTLCQHWLHQSPTSRVHVFVDHVRQVPRRLVDEAVIQTSASNGGDADVRVDQVEVVPLTTYDLLEVKIGQQEQGVFELPQGYTTLDCDLHVGGFPYLHLFHDYLR 627
P QF A+++V +HL D + YPP + RM++ YD A+ + EG+ AGKT++R Y K+E+M++ GEF C R+YLG+AMP PE+P Q V ++ +C+HW+H +RVHV+ D VP RL +E VI + L T+DL +V +G Q F +P GY DC +VGGFPY+H FH YLR
Sbjct: 29 PRQFQAEVQVLSHLTDPRQDYPPSMGRMKVQYDFDQQLARAEMLEGYNAGKTFVRRYDQKQEFMVKGGEFRKCERAYLGDAMPAPEIP---FTQEFVAMESVRGKVCEHWVHAHEDARVHVYSDVATNVPIRLTEENVIDGQPTM---------------LLTFDLFDVHVGPQNVSSFTIPDGYERSDCVRNVGGFPYIHAFHYYLR 218
BLAST of mRNA_S-ischiensis_contig109.1941.1 vs. uniprot
Match: H3H268_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H268_PHYRM) HSP 1 Score: 173 bits (438), Expect = 6.060e-51 Identity = 83/208 (39.90%), Postives = 116/208 (55.77%), Query Frame = 1
Query: 4 PLQFSAKLEVTAHLVDRTKPYPPWLRRMELNYDHSSSKAKIIITEGFGAGKTYIRHYSDKREYMIREGEFPTCRRSYLGEAMPLPELPPMAVFQGMVKLDDEPNTLCQHWLHQSPTSRVHVFVDHVRQVPRRLVDEAVIQTSASNGGDADVRVDQVEVVPLTTYDLLEVKIGQQEQGVFELPQGYTTLDCDLHVGGFPYLHLFHDYLR 627
P QF A+++V +HL D + YPP + RM + YD A+ + EG+ AGKT++R Y +K+E+M++ GEF C R+YLG+ MP PE+P Q V ++ +C+HW+H RVHV+ D VP RL +E +I + L T+DLL V +G Q F +P GY DC VGGFPY+H FH YLR
Sbjct: 27 PRQFQAEVQVLSHLTDPRQEYPPSMGRMRVQYDFDQQLARAEMVEGYNAGKTFVRRYDEKQEFMVKSGEFRKCERAYLGDTMPTPEIP---FAQEFVAMESVRGKVCEHWMHAHEDVRVHVYSDVATNVPIRLTEENLIDGQPTM---------------LLTFDLLNVHVGPQNVSSFSIPDGYEPSDCVRSVGGFPYIHAFHYYLR 216
BLAST of mRNA_S-ischiensis_contig109.1941.1 vs. uniprot
Match: A0A067CFD2_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CFD2_SAPPC) HSP 1 Score: 172 bits (435), Expect = 1.770e-50 Identity = 87/210 (41.43%), Postives = 123/210 (58.57%), Query Frame = 1
Query: 4 PLQFSAKLEVTAHLVDRTKPYPPWLRRMELNYDHSSSKAKIIITEGFGAGKTYIRHYSDKREYMIREGEFPTCRRSYLGEAMPLPELPPMAVFQGMVKLDDEPNTLCQHWLHQSPTS--RVHVFVDHVRQVPRRLVDEAVIQTSASNGGDADVRVDQVEVVPLTTYDLLEVKIGQQEQGVFELPQGYTTLDCDLHVGGFPYLHLFHDYLR 627
PLQF A +E+T+HLVDR+K YPPWLRR+++ YD A+ I G+ GKTYIR Y K+EY+++ GE+ C R+YLGE MPLP +P + QG +D C+ W+ + + RV V+ +VP RL+ E+ + GDA L TYD+L+V + Q+ VFE+P GY+ C V GFPY+H+F Y+R
Sbjct: 25 PLQFDANIEITSHLVDRSKDYPPWLRRLKVRYDFDQKVARADILAGYDKGKTYIRRYDTKKEYIVKYGEYKKCERAYLGEDMPLPRVPSDLILQGTSTID---GVDCRLWVSEDSDANVRVSVYERSSDRVPIRLMQESQLD------GDA--------WTTLITYDMLDVTVRPQDLSVFEIPGGYSHRSCSRSVSGFPYIHIFDHYVR 217
BLAST of mRNA_S-ischiensis_contig109.1941.1 vs. uniprot
Match: W2Q6Y1_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2Q6Y1_PHYPN) HSP 1 Score: 170 bits (431), Expect = 1.020e-49 Identity = 84/208 (40.38%), Postives = 116/208 (55.77%), Query Frame = 1
Query: 4 PLQFSAKLEVTAHLVDRTKPYPPWLRRMELNYDHSSSKAKIIITEGFGAGKTYIRHYSDKREYMIREGEFPTCRRSYLGEAMPLPELPPMAVFQGMVKLDDEPNTLCQHWLHQSPTSRVHVFVDHVRQVPRRLVDEAVIQTSASNGGDADVRVDQVEVVPLTTYDLLEVKIGQQEQGVFELPQGYTTLDCDLHVGGFPYLHLFHDYLR 627
P QF A++ V +HL D + YPP + RM++ YD A+ + EG+ AGKT++R Y K+E+M++ GEF C R+YLG+AMP+PE+P Q V ++ +C+HW+H RVHV+ D VP RL +E VI + L T+D V IG Q F +P GY DC +VGGFPY+H FH YLR
Sbjct: 40 PHQFQAEVHVLSHLTDPRQEYPPSMGRMKVQYDFDQQLARAEMLEGYNAGKTFLRRYDQKQEFMVKSGEFRKCERAYLGDAMPVPEIP---FAQEFVAMESVRGKVCEHWVHAHDNVRVHVYSDVSTNVPIRLTEENVIDGQPTM---------------LQTFDFHNVHIGPQNVSSFAIPDGYERSDCARNVGGFPYIHAFHYYLR 229
BLAST of mRNA_S-ischiensis_contig109.1941.1 vs. uniprot
Match: D0N837_PHYIT (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=D0N837_PHYIT) HSP 1 Score: 168 bits (426), Expect = 3.480e-49 Identity = 86/208 (41.35%), Postives = 119/208 (57.21%), Query Frame = 1
Query: 4 PLQFSAKLEVTAHLVDRTKPYPPWLRRMELNYDHSSSKAKIIITEGFGAGKTYIRHYSDKREYMIREGEFPTCRRSYLGEAMPLPELPPMAVFQGMVKLDDEPNTLCQHWLHQSPTSRVHVFVDHVRQVPRRLVDEAVIQTSASNGGDADVRVDQVEVVPLTTYDLLEVKIGQQEQGVFELPQGYTTLDCDLHVGGFPYLHLFHDYLR 627
P QF A++ V +HL D + YPP + RM++ YD A+ + EG+ AGKT++R Y K+E+M++ GEF C R+YLG+AMP+PE+P Q V + + +C+HW+H RVHV+ D VP RL +E VI NG + L T+DL V +G Q F +P GY DC +VGGFPY+H FH YLR
Sbjct: 26 PHQFQAEVLVLSHLTDPRQEYPPSMGRMKVQYDFDQQLARAEMLEGYNAGKTFVRRYDQKQEFMVKSGEFRKCERAYLGDAMPVPEIP---FTQEFVSVRGK---VCEHWVHTHDNVRVHVYSDVATNVPIRLTEENVI-----NG----------QPTMLQTFDLQNVHVGPQNASSFAIPDGYERSDCVRNVGGFPYIHAFHYYLR 212
BLAST of mRNA_S-ischiensis_contig109.1941.1 vs. uniprot
Match: A0A6A4E3U2_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A4E3U2_9STRA) HSP 1 Score: 167 bits (422), Expect = 1.670e-48 Identity = 82/208 (39.42%), Postives = 117/208 (56.25%), Query Frame = 1
Query: 4 PLQFSAKLEVTAHLVDRTKPYPPWLRRMELNYDHSSSKAKIIITEGFGAGKTYIRHYSDKREYMIREGEFPTCRRSYLGEAMPLPELPPMAVFQGMVKLDDEPNTLCQHWLHQSPTSRVHVFVDHVRQVPRRLVDEAVIQTSASNGGDADVRVDQVEVVPLTTYDLLEVKIGQQEQGVFELPQGYTTLDCDLHVGGFPYLHLFHDYLR 627
P QF A+++V +HL D + YPP + RM++ YD A + EG+ AGKT++R Y K+E+M++ GEF C R+YLG+AMP P +P Q V ++ +C+HW+H + VHV+ D VP RL +E+VI + + L T+DLL V +G Q F +P GY C +VGGFPY+H FH YLR
Sbjct: 29 PRQFQAEVQVLSHLTDPRQDYPPSVGRMKVQYDFDQQLALAEMLEGYNAGKTFVRRYDLKQEFMVKSGEFRKCERAYLGDAMPTPGIP---FTQEFVAMESVRGKVCEHWVHAHEDAHVHVYSDVASNVPIRLTEESVIDG---------------QPMMLLTFDLLNVHVGPQNVSSFTIPDGYERSGCVRNVGGFPYIHAFHYYLR 218 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig109.1941.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig109.1941.1 >prot_S-ischiensis_contig109.1941.1 ID=prot_S-ischiensis_contig109.1941.1|Name=mRNA_S-ischiensis_contig109.1941.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=211bp FPLQFSAKLEVTAHLVDRTKPYPPWLRRMELNYDHSSSKAKIIITEGFGAback to top mRNA from alignment at S-ischiensis_contig109:80955..85258- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig109.1941.1 ID=mRNA_S-ischiensis_contig109.1941.1|Name=mRNA_S-ischiensis_contig109.1941.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4304bp|location=Sequence derived from alignment at S-ischiensis_contig109:80955..85258- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig109:80955..85258- >mRNA_S-ischiensis_contig109.1941.1 ID=mRNA_S-ischiensis_contig109.1941.1|Name=mRNA_S-ischiensis_contig109.1941.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1266bp|location=Sequence derived from alignment at S-ischiensis_contig109:80955..85258- (Schizocladia ischiensis KU_0333)back to top |