mRNA_S-ischiensis_contig109.1932.1 (mRNA) Schizocladia ischiensis KU_0333
|
Overview
Homology
BLAST of mRNA_S-ischiensis_contig109.1932.1 vs. uniprot
Match: A0A835YMY9_9STRA (ATP synthase gamma chain n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMY9_9STRA) HSP 1 Score: 467 bits (1202), Expect = 5.680e-156 Identity = 252/353 (71.39%), Postives = 289/353 (81.87%), Query Frame = 1
Query: 100 CAAAFQGPVAISAFRGAQVLQKVEDFSARARPQHGLWMGGKENEIRDRISTVSNTQKITEAMRLVAAAKVRRAQDAVLRTRPFSEILQGIFGALINQLGKEDINLPLLEQRDVKTVLVVAISGDRGLCGAYNSYAIKKTEARMKELMAQGYKVELVAIGKKISQYFRRREE-YKVIRTFDCGQAPDAAEASSIAQELLADYLSGNADSVELIYSRFVSLIASEPSIRTLLPLTIRGIEDEQDEIFQLTSESGQFSVERETLPKVPAAELSQDLIFEQDPIQILNSMLPLYLDGQILRCLQESVAAELAXXXXXXXXXXXXXRDLKKSLSLVYNRARQASVTQEILEIVAGANA 1155
CA+AFQ P+ +S+F G+Q++Q V +F R + L M GK N +R RI+TV NT+KITEAMRLVAAAKVRRAQDAVLRTRPFSE LQGIFGALI QLGKED+NLPLLE+R+V V+VV ISGDRGLCGAYNSYAIKKTEAR+K L AQG +V+++ IGKKI+QYFRRR E Y V R+F+CGQ P AAEA++IA+ELLADYLSG DSVE+IYSRFVSLI+SEPSIRTLLPL IRGIE E DEIFQLTS G+FSV RE +P PAAEL QDLIFEQDP+QILN++LPLYLDGQILR LQESVA+ELA +L LSL YNRARQASVTQE+LEIVAGANA
Sbjct: 16 CASAFQAPLGVSSFSGSQIVQSVAEF--RPQTTRTLVMDGKSNVLRGRIATVKNTKKITEAMRLVAAAKVRRAQDAVLRTRPFSETLQGIFGALIEQLGKEDVNLPLLEEREVNKVIVVGISGDRGLCGAYNSYAIKKTEARIKALKAQGLEVDVIPIGKKITQYFRRRSEIYNVKRSFNCGQNPSAAEAAAIAEELLADYLSGETDSVEIIYSRFVSLISSEPSIRTLLPLKIRGIEAEGDEIFQLTSSGGKFSVNREEVPATPAAELGQDLIFEQDPVQILNAILPLYLDGQILRVLQESVASELASRMQAMASASDNAGELASKLSLQYNRARQASVTQELLEIVAGANA 366
BLAST of mRNA_S-ischiensis_contig109.1932.1 vs. uniprot
Match: D8LBF0_ECTSI (ATP synthase gamma chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBF0_ECTSI) HSP 1 Score: 457 bits (1176), Expect = 5.890e-152 Identity = 255/368 (69.29%), Postives = 294/368 (79.89%), Query Frame = 1
Query: 61 MKRTCMIVLGGAACAAAFQGPVAISAFRGAQVLQKVEDFSARARPQHGLW--MGGKENEIRDRISTVSNTQKITEAMRLVAAAKVRRAQDAVLRTRPFSEILQGIFGALINQLGKEDINLPLLEQRDVKTVLVVAISGDRGLCGAYNSYAIKKTEARMKELMAQGYKVELVAIGKKISQYFRRREE-YKVIRTFDCGQAPDAAEASSIAQELLADYLSGNADSVELIYSRFVSLIASEPSIRTLLPLTIRGIEDEQDEIFQLTSESGQFSVERETLPKVPAAELSQDLIFEQDPIQILNSMLPLYLDGQILRCLQESVAAELAXXXXXXXXXXXXXRDLKKSLSLVYNRARQASVTQEILEIVAGANA 1155
+ RT ++G AACA+AF GP A+++F G +V+ V+ A + + MGGKEN IR RI TV+NT+KIT AMRLVAAAKVRRAQDAVLRTRPFSE LQ IFGALI QLGKE+++LPLL R+VK VL+V +SGDRGLCGAYNSYAIKKTEAR EL AQGY VE V IGKKISQYF+RR + Y V R FDCGQAP+AAEAS+IAQELL+DYLSG DSVE++Y++FVSLIASEPSIRTLLPL+IRGIEDE DEIFQLT++ G+F+V+RE V AE+ QDLIFEQDPIQILNS+LPLYLDGQILR LQESVAAELA DL K LSL YNRARQASVTQE+LEIVAGA+A
Sbjct: 4 LARTLAALVGSAACASAFMGP-AVTSFSGVRVVDNVDAVVASPARRSVVTPRMGGKENAIRQRIVTVNNTKKITTAMRLVAAAKVRRAQDAVLRTRPFSETLQSIFGALIAQLGKENLDLPLLNAREVKNVLLVGLSGDRGLCGAYNSYAIKKTEARGNELTAQGYNVEYVTIGKKISQYFKRRSDTYTVKRAFDCGQAPNAAEASAIAQELLSDYLSGEFDSVEIVYTKFVSLIASEPSIRTLLPLSIRGIEDETDEIFQLTTQGGKFTVDREEAEPVENAEIPQDLIFEQDPIQILNSILPLYLDGQILRMLQESVAAELAARMASMGAASDNAADLAKRLSLQYNRARQASVTQELLEIVAGADA 370
BLAST of mRNA_S-ischiensis_contig109.1932.1 vs. uniprot
Match: A0A7S2UYS0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYS0_9STRA) HSP 1 Score: 390 bits (1001), Expect = 8.830e-126 Identity = 208/323 (64.40%), Postives = 258/323 (79.88%), Query Frame = 1
Query: 190 RPQHG-LWMGGKENEIRDRISTVSNTQKITEAMRLVAAAKVRRAQDAVLRTRPFSEILQGIFGALINQLGKEDINLPLLEQRDVKTVLVVAISGDRGLCGAYNSYAIKKTEARMKELMAQGYKVELVAIGKKISQYFRRREEYKVIRTFDCGQAPDAAEASSIAQELLADYLSGNADSVELIYSRFVSLIASEPSIRTLLPLTIRGIEDEQDEIFQLTSESGQFSVERETLPKVPAAELSQDLIFEQDPIQILNSMLPLYLDGQILRCLQESVAAELAXXXXXXXXXXXXXRDLKKSLSLVYNRARQASVTQEILEIVAGANA 1155
RP G L M GK N IRDRI TV+NT+KIT AM+LVAAAKVRRAQDAVL+TRPFSE LQ IFGALI QLG+E ++LPLL++R+V V++V +SGDRGLCG+YNSYAIK+TE RM EL A G +V L+ +GKKIS YF +R+ V+R+++ GQ+P A+A++I++ELLAD+LSG DSVELIY+RFVSLIAS P++RT+LPL RGIE E DEIF++TSE GQFSV+RE + AEL +DLIFEQDP+QILN++LPLYL+GQILR LQESVA+ELA + L K+L+ YNRARQA+VTQE+LEIVAGA A
Sbjct: 48 RPTSGNLVMDGKSNIIRDRIKTVNNTKKITSAMKLVAAAKVRRAQDAVLQTRPFSETLQKIFGALIKQLGREFLDLPLLQEREVNKVVLVCLSGDRGLCGSYNSYAIKRTEQRMAELKAAGVEVSLITVGKKISSYFNKRDT-PVLRSYEMGQSPTGADATAISEELLADFLSGECDSVELIYTRFVSLIASTPAVRTMLPLKPRGIETEGDEIFEMTSEGGQFSVKREAVEAAEPAELPKDLIFEQDPVQILNAILPLYLNGQILRTLQESVASELAARMQAMQSATDNAKSLSKTLTSEYNRARQAAVTQELLEIVAGATA 369
BLAST of mRNA_S-ischiensis_contig109.1932.1 vs. uniprot
Match: A0A7S0GKQ1_9STRA (Hypothetical protein n=3 Tax=Sar TaxID=2698737 RepID=A0A7S0GKQ1_9STRA) HSP 1 Score: 372 bits (956), Expect = 3.980e-119 Identity = 198/328 (60.37%), Postives = 243/328 (74.09%), Query Frame = 1
Query: 172 DFSARARPQHGLWMGGKENEIRDRISTVSNTQKITEAMRLVAAAKVRRAQDAVLRTRPFSEILQGIFGALINQLGKEDINLPLLEQRDVKTVLVVAISGDRGLCGAYNSYAIKKTEARMKELMAQGYKVELVAIGKKISQYFRRREEYKVIRTFDCGQAPDAAEASSIAQELLADYLSGNADSVELIYSRFVSLIASEPSIRTLLPLTIRGIEDEQDEIFQLTSESGQFSVERETLPKVPAAELSQDLIFEQDPIQILNSMLPLYLDGQILRCLQESVAAELAXXXXXXXXXXXXXRDLKKSLSLVYNRARQASVTQEILEIVAGANA 1155
D SA Q + M GK N IRDRI V NTQKIT AM+LVAAAKVRRAQDAV+ TRPFSE LQ +FG L+ +LG + I+LPLL QRDVK V +V ISGDRGLCG YNS+ IKKT+AR KEL+AQG +VE+V +GKK + YF RR Y +++ FDCGQ P+A +A++I++E+L+ YL+G D+VEL Y++FVSLIAS PS RTL+P + I E DEI+QLTS G+F VER+ L E D+IFEQDPIQI+NS+LPLYL+GQ+LRCLQESVA+ELA DL +LS YNRARQASVT EILEIV+GA+A
Sbjct: 40 DSSAHRTRQATIVMDGKANAIRDRIKIVKNTQKITMAMKLVAAAKVRRAQDAVVATRPFSETLQSVFGGLVQRLGSDTIDLPLLTQRDVKKVTLVIISGDRGLCGGYNSFMIKKTDARFKELVAQGIEVEMVLVGKKANAYFSRRN-YPIVKYFDCGQNPNAKQANAISEEILSTYLAGETDTVELYYTKFVSLIASSPSTRTLIPFSASEISQESDEIYQLTSSEGKFEVERKDLGAAEPQEFPNDMIFEQDPIQIVNSILPLYLNGQLLRCLQESVASELAARMNAMQAAADNAGDLSSALSQEYNRARQASVTAEILEIVSGASA 366
BLAST of mRNA_S-ischiensis_contig109.1932.1 vs. uniprot
Match: A0A7R9UGL8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGL8_9STRA) HSP 1 Score: 357 bits (915), Expect = 3.610e-113 Identity = 190/316 (60.13%), Postives = 239/316 (75.63%), Query Frame = 1
Query: 211 MGGKENEIRDRISTVSNTQKITEAMRLVAAAKVRRAQDAVLRTRPFSEILQGIFGALINQLGKEDINLPLLEQR-DVKTVLVVAISGDRGLCGAYNSYAIKKTEARMKELMAQGYKVELVAIGKKISQYFRRREEYKVIRTFDCGQAPDAAEASSIAQELLADYLSGNADSVELIYSRFVSLIASEPSIRTLLPLTIRGIEDEQDEIFQLTSESGQFSVERETLPKVPAAELSQDLIFEQDPIQILNSMLPLYLDGQILRCLQESVAAELAXXXXXXXXXXXXXRDLKKSLSLVYNRARQASVTQEILEIVAGANA 1155
M GK N IRDRI +V NT+KITEAMRLVAAAKVRRAQDA L+TRPF+E +Q +F ++++LG E++++PLL R ++K VLVV I+GDRGLCG YN+ AIKK E+R++EL AQG + L+ IG K S YF+ R Y + T + GQAP +A++I +E+LAD+LSG D VELIY+RFVSLIASEPS+RTLLPLT GIE E DEIF LT++ G+FSV R +P E D+IFEQDP+QILN+++PLYL+GQ+LR LQESVA+ELA ++L L+L YNRARQASVTQEILEIVAGANA
Sbjct: 44 MDGKSNAIRDRIKSVKNTKKITEAMRLVAAAKVRRAQDACLQTRPFTESVQSVFSGIVDRLGNENLDIPLLTPRAEIKKVLVVLITGDRGLCGGYNNNAIKKAESRLRELEAQGIEYALLLIGNKGSTYFKNRN-YPIYGTSETGQAPTGEQATAITEEMLADFLSGEVDRVELIYTRFVSLIASEPSLRTLLPLTATGIESEGDEIFSLTTKEGEFSVSRTEVPAAEPEEFPADMIFEQDPVQILNALVPLYLNGQVLRTLQESVASELAARMAAMQAASDNAKELGSKLTLQYNRARQASVTQEILEIVAGANA 358
BLAST of mRNA_S-ischiensis_contig109.1932.1 vs. uniprot
Match: A0A7S1CZK0_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CZK0_CYCTE) HSP 1 Score: 356 bits (913), Expect = 9.360e-113 Identity = 197/338 (58.28%), Postives = 242/338 (71.60%), Query Frame = 1
Query: 145 GAQVLQKV-EDFSARARPQHGLWMGGKENEIRDRISTVSNTQKITEAMRLVAAAKVRRAQDAVLRTRPFSEILQGIFGALINQLGKEDINLPLLEQRDVKTVLVVAISGDRGLCGAYNSYAIKKTEARMKELMAQGYKVELVAIGKKISQYFRRREEYKVIRTFDCGQAPDAAEASSIAQELLADYLSGNADSVELIYSRFVSLIASEPSIRTLLPLTIRGIEDEQDEIFQLTSESGQFSVERETLPKVPAAELSQDLIFEQDPIQILNSMLPLYLDGQILRCLQESVAAELAXXXXXXXXXXXXXRDLKKSLSLVYNRARQASVTQEILEIVAGANA 1155
G + + KV D +A + + M GK N IRDRI +V+NT+KIT AM+LVAAAKVRRAQDAVL TRPFSE LQ +FG LI++LG E+I+LPLL QRDVK V +V I+GDRGLCG YNS+ I+K EAR KEL QG V++V IGKK YF RR Y + DCGQ PDA++A I+QELL YLSG D++EL+Y++FVSLIAS PS RTL+P + I + DE+FQLTS G F VER+ L E D+IFEQDP++I+N++LPLYL+GQILR LQESVA+ELA +L + LSL YNRARQA+VTQEILEIVAGA A
Sbjct: 29 GERAINKVYTDGAAHRTRRSTIVMDGKANAIRDRIKSVTNTKKITMAMKLVAAAKVRRAQDAVLATRPFSETLQSVFGGLISRLGGENIDLPLLTQRDVKKVTLVVITGDRGLCGGYNSFMIRKAEARYKELTDQGIGVDMVLIGKKGVGYFERRN-YPIRLAVDCGQNPDASQALQISQELLNSYLSGETDAIELLYTKFVSLIASTPSTRTLVPFSASEITSQADEVFQLTSSGGDFGVERKELEVAEPQEFPNDMIFEQDPLEIVNAILPLYLNGQILRTLQESVASELAARMQSMQSASDNAAELARKLSLEYNRARQAAVTQEILEIVAGATA 365
BLAST of mRNA_S-ischiensis_contig109.1932.1 vs. uniprot
Match: A0A7S1TZ92_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZ92_9STRA) HSP 1 Score: 355 bits (911), Expect = 3.480e-112 Identity = 194/326 (59.51%), Postives = 239/326 (73.31%), Query Frame = 1
Query: 181 ARARPQHGLWMGGKENEIRDRISTVSNTQKITEAMRLVAAAKVRRAQDAVLRTRPFSEILQGIFGALINQLGKEDINLPLLEQR-DVKTVLVVAISGDRGLCGAYNSYAIKKTEARMKELMAQGYKVELVAIGKKISQYFRRREEYKVIRTFDCGQAPDAAEASSIAQELLADYLSGNADSVELIYSRFVSLIASEPSIRTLLPLTIRGIEDEQDEIFQLTSESGQFSVERETLPKVPAAELSQDLIFEQDPIQILNSMLPLYLDGQILRCLQESVAAELAXXXXXXXXXXXXXRDLKKSLSLVYNRARQASVTQEILEIVAGANA 1155
A R + M GK N IRDRI +V NT+KITEAMRLVAAAKVRRAQDA L+TRPF+E +Q +F L+ +LG E + LPLL R DV+ VL++ I+GDRGLCG YN+YAIKK EAR+ EL AQG K EL+ IG K S YF+ R Y + DCGQAP +A++I +E+LAD+LSG+ D VELIY+RFVSLIASEPS+RTLLPL+ +GIE E DEIF LTS SG F+V R+ + D+IFEQDP+ ILN+++PLYL+GQ+LR LQESVA+ELA ++L LSL YNRARQASVTQEILEIVAG++A
Sbjct: 61 AGVRTGRTIVMDGKSNAIRDRIKSVGNTKKITEAMRLVAAAKVRRAQDACLQTRPFTESVQSVFSGLVERLGSEGLALPLLTPRPDVEKVLIMLITGDRGLCGGYNNYAIKKAEARVAELEAQGIKYELMLIGNKGSSYFKSRG-YPIKSVGDCGQAPTGEQATAITEEILADFLSGDVDRVELIYTRFVSLIASEPSVRTLLPLSAQGIEMEGDEIFSLTSSSGDFAVSRDDKGPAEPEQFPADMIFEQDPVSILNALVPLYLNGQVLRTLQESVASELAARMSAMQAASDNAKELGNKLSLQYNRARQASVTQEILEIVAGSSA 385
BLAST of mRNA_S-ischiensis_contig109.1932.1 vs. uniprot
Match: A0A8J2SDI0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SDI0_9STRA) HSP 1 Score: 352 bits (904), Expect = 9.760e-112 Identity = 190/313 (60.70%), Postives = 237/313 (75.72%), Query Frame = 1
Query: 217 GKENEIRDRISTVSNTQKITEAMRLVAAAKVRRAQDAVLRTRPFSEILQGIFGALINQLGKEDINLPLLEQRDVKTVLVVAISGDRGLCGAYNSYAIKKTEARMKELMAQGYKVELVAIGKKISQYFRRREEYKVIRTFDCGQAPDAAEASSIAQELLADYLSGNADSVELIYSRFVSLIASEPSIRTLLPLTIRGIEDEQDEIFQLTSESGQFSVERETLPKVPAAELSQDLIFEQDPIQILNSMLPLYLDGQILRCLQESVAAELAXXXXXXXXXXXXXRDLKKSLSLVYNRARQASVTQEILEIVAGANA 1155
GK E+RDRI+TV NTQKITEAMRLVAAAKVRRAQ+AVL+TRPFSE LQ +F LI+QLGKE I++PLLE R+VK V ++A+SGDRGLCG+YN+Y IKKTEAR +EL AQG +VE+V +G K++ YFRRR + ++C Q P A A++++ E+L +L G D VELIY++FVSLIAS P ++TLLPL+ G+E +DE+F+LT+E G+ +VE L A E +D IFEQDPI ILN +LPLYLDGQILR LQE+VA+ELA +DLKKSLS YNR RQA VTQEILEIVAGA+A
Sbjct: 32 GKGGELRDRIATVGNTQKITEAMRLVAAAKVRRAQEAVLQTRPFSETLQSVFLGLIDQLGKEPIDIPLLETREVKKVTLLAMSGDRGLCGSYNTYIIKKTEARKQELEAQGIEVEIVPVGTKVAGYFRRRG-VEFPSEYNCPQVPTAEFAAAVSSEMLNKFLDGETDKVELIYTQFVSLIASAPKLKTLLPLSKTGLEAAEDEMFELTTEDGELAVETTPLDAPEAKEFPKDTIFEQDPIAILNGILPLYLDGQILRSLQEAVASELASRMQSMQSASDNAKDLKKSLSQTYNRIRQAGVTQEILEIVAGASA 343
BLAST of mRNA_S-ischiensis_contig109.1932.1 vs. uniprot
Match: B8C0W4_THAPS (ATP synthase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0W4_THAPS) HSP 1 Score: 352 bits (904), Expect = 2.040e-111 Identity = 187/329 (56.84%), Postives = 240/329 (72.95%), Query Frame = 1
Query: 169 EDFSARARPQHGLWMGGKENEIRDRISTVSNTQKITEAMRLVAAAKVRRAQDAVLRTRPFSEILQGIFGALINQLGKEDINLPLLEQRDVKTVLVVAISGDRGLCGAYNSYAIKKTEARMKELMAQGYKVELVAIGKKISQYFRRREEYKVIRTFDCGQAPDAAEASSIAQELLADYLSGNADSVELIYSRFVSLIASEPSIRTLLPLTIRGIEDEQDEIFQLTSESGQFSVERETLPKVPAAELSQDLIFEQDPIQILNSMLPLYLDGQILRCLQESVAAELAXXXXXXXXXXXXXRDLKKSLSLVYNRARQASVTQEILEIVAGANA 1155
++ +A + + M GK N IRDRI++V+NT+KIT AM+LVAAAKVRRAQD+VL TRPFSE LQ +FG LIN+LG E +LPLL QR+V V + I+GDRGLCG YNS+ IKK EAR KEL AQG + + + IGKK + YF RRE Y + + FDCGQ P++ EA +I++E++ +LSG D+VEL+Y++FVSLIAS PS+RTL+P + I + DE+FQLTS+ G F VER+ L + D+IFEQDP+QI+NS+LPLYL+GQILR LQESVA+ELA + L K LS YNRARQA+VTQEILEIV+GA A
Sbjct: 38 QEGNAHRNRRATIVMDGKANAIRDRITSVNNTKKITSAMKLVAAAKVRRAQDSVLATRPFSETLQSVFGGLINRLGGEAADLPLLTQREVNKVTITVITGDRGLCGGYNSFMIKKAEARYKELTAQGIECDFILIGKKGASYFARRE-YPIRKVFDCGQNPNSKEALAISEEIINSFLSGETDAVELLYTKFVSLIASSPSVRTLVPFSASEISQKGDEVFQLTSQDGDFGVERKELEVAEPQDFPNDMIFEQDPLQIVNSILPLYLNGQILRTLQESVASELAARMQSMQSASDNAKALAKRLSQEYNRARQAAVTQEILEIVSGATA 365
BLAST of mRNA_S-ischiensis_contig109.1932.1 vs. uniprot
Match: A0A7S1FZ43_9STRA (Hypothetical protein n=4 Tax=Eukaryota TaxID=2759 RepID=A0A7S1FZ43_9STRA) HSP 1 Score: 351 bits (901), Expect = 4.980e-111 Identity = 185/339 (54.57%), Postives = 241/339 (71.09%), Query Frame = 1
Query: 139 FRGAQVLQKVEDFSARARPQHGLWMGGKENEIRDRISTVSNTQKITEAMRLVAAAKVRRAQDAVLRTRPFSEILQGIFGALINQLGKEDINLPLLEQRDVKTVLVVAISGDRGLCGAYNSYAIKKTEARMKELMAQGYKVELVAIGKKISQYFRRREEYKVIRTFDCGQAPDAAEASSIAQELLADYLSGNADSVELIYSRFVSLIASEPSIRTLLPLTIRGIEDEQDEIFQLTSESGQFSVERETLPKVPAAELSQDLIFEQDPIQILNSMLPLYLDGQILRCLQESVAAELAXXXXXXXXXXXXXRDLKKSLSLVYNRARQASVTQEILEIVAGANA 1155
F G V D + A + + M GK N IRDRI TV NT+KIT AM+LVAAAKVRRAQDAV+ TRPFSE LQ +FG LI +LG + ++LPLL R+VKT +V ++GDRGLCG YN++ IKK E R+++L AQG KVE++ +GKK + + R + V+ T++CGQ P + EA++I+ LL +L N D+VE +Y+RFVSLIAS PS RTLLP + GIE ++DEIFQLTS+ G FSVE+ +P + ++IFEQDP QI+NSMLPLYL+GQ+LR +QE+VA+ELA DL+K+LS YNRARQA+VTQEILEIV+GA A
Sbjct: 22 FLGNSPATHVVDNRSHATRRGTIVMDGKANAIRDRIVTVKNTKKITLAMKLVAAAKVRRAQDAVVATRPFSETLQSVFGGLIERLGADSLDLPLLTSREVKTATLVVVTGDRGLCGGYNNFIIKKAEKRIEDLQAQGIKVEIITVGKKGTVFMNRYRKDLVVATYECGQNPSSVEATAISNTLLNRFLGDNTDTVEFVYTRFVSLIASTPSSRTLLPCSATGIETQEDEIFQLTSKDGDFSVEKTVIPAAEPQDFPSEMIFEQDPAQIINSMLPLYLNGQVLRMMQEAVASELAARMQAMQSASDNASDLEKNLSQQYNRARQAAVTQEILEIVSGAQA 360 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig109.1932.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig109.1932.1 >prot_S-ischiensis_contig109.1932.1 ID=prot_S-ischiensis_contig109.1932.1|Name=mRNA_S-ischiensis_contig109.1932.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=366bp MKRTCMIVLGGAACAAAFQGPVAISAFRGAQVLQKVEDFSARARPQHGLWback to top mRNA from alignment at S-ischiensis_contig109:48542..52999+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig109.1932.1 ID=mRNA_S-ischiensis_contig109.1932.1|Name=mRNA_S-ischiensis_contig109.1932.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4458bp|location=Sequence derived from alignment at S-ischiensis_contig109:48542..52999+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig109:48542..52999+ >mRNA_S-ischiensis_contig109.1932.1 ID=mRNA_S-ischiensis_contig109.1932.1|Name=mRNA_S-ischiensis_contig109.1932.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2196bp|location=Sequence derived from alignment at S-ischiensis_contig109:48542..52999+ (Schizocladia ischiensis KU_0333)back to top |