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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1431 |
| Cds size | 993 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815571.855693-UTR-S-ischiensis_contig108:95225..95641 | 1622815571.855693-UTR-S-ischiensis_contig108:95225..95641 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig108 95226..95641 - |
| 1695739777.7154121-UTR-S-ischiensis_contig108:95225..95641 | 1695739777.7154121-UTR-S-ischiensis_contig108:95225..95641 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig108 95226..95641 - |
| 1622815571.8856766-UTR-S-ischiensis_contig108:96848..96870 | 1622815571.8856766-UTR-S-ischiensis_contig108:96848..96870 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig108 96849..96870 - |
| 1695739777.748514-UTR-S-ischiensis_contig108:96848..96870 | 1695739777.748514-UTR-S-ischiensis_contig108:96848..96870 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig108 96849..96870 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815571.8659873-CDS-S-ischiensis_contig108:95641..96301 | 1622815571.8659873-CDS-S-ischiensis_contig108:95641..96301 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig108 95642..96301 - |
| 1695739777.7264335-CDS-S-ischiensis_contig108:95641..96301 | 1695739777.7264335-CDS-S-ischiensis_contig108:95641..96301 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig108 95642..96301 - |
| 1622815571.87583-CDS-S-ischiensis_contig108:96515..96848 | 1622815571.87583-CDS-S-ischiensis_contig108:96515..96848 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig108 96516..96848 - |
| 1695739777.7385337-CDS-S-ischiensis_contig108:96515..96848 | 1695739777.7385337-CDS-S-ischiensis_contig108:96515..96848 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig108 96516..96848 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig108.1915.1 >prot_S-ischiensis_contig108.1915.1 ID=prot_S-ischiensis_contig108.1915.1|Name=mRNA_S-ischiensis_contig108.1915.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=331bp
MATTNKRGANAAAARYSGLQLSSCAIMEGVFPRGGLKSCRRRQARRCQPA
TMRRHGRRDPLSPPAGLPVRLPHVEGLPPAQGLGPGCAWPPCLVQLVAIC
RRRRQLPASSKQTAKQAPPSLGPEDDLRRDRLYRHGGVQNDDGPKCPLDH
GPRRYPRKLRRRFGAHTWSLSTQARLAWRRLAGRLASFQGGLSDIATTVQ
VLVLGRLGVVAPPRLQLGVYLGTSLHLLPSEVVVHHHPHQMIARVQYYMD
LNCCTLEYCTRSQHLFRTVSLCNLHCYASLQAVLRGVILGIRHAWSLQLP
HGSVGTSWAPMSWEQLKLITRTTEVQYCST* back to topmRNA from alignment at S-ischiensis_contig108:95226..96870- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig108.1915.1 ID=mRNA_S-ischiensis_contig108.1915.1|Name=mRNA_S-ischiensis_contig108.1915.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1645bp|location=Sequence derived from alignment at S-ischiensis_contig108:95226..96870- (Schizocladia ischiensis KU_0333)
GCAAGCCATCAACATCACCTCTATGGCTACAACAAACAAGCGGGGGGCAA
ACGCAGCTGCAGCGCGCTACAGCGGGCTGCAGCTGAGTAGCTGTGCCATC
ATGGAAGGCGTTTTTCCGCGGGGAGGCCTCAAAAGCTGCAGGCGGCGGCA
AGCGCGGCGGTGCCAGCCCGCCACGATGCGGCGGCATGGGCGGAGGGATC
CTCTGAGTCCGCCGGCAGGGCTTCCAGTGCGTCTTCCTCACGTGGAGGGT
CTGCCTCCGGCGCAGGGCCTTGGCCCTGGATGTGCATGGCCGCCATGCCT
GGTCCAGCTTGTCGCCATCTGCCGGCGACGCCGCCAGCTCCCAGCATCAT
CCAAGGTATGTGGGCGTCCGAGTTTACCAGGGTGATGTCGGGGTCCCTGG
CCCCTCGGGAGTTTAGGGCCATCATCGGTGTGGGTGTGCACGCGTCCGTA
GGCGGTCAACTGCCGATGGCCAAGATGCCCTTGAGACCCAGCTGGCGACC
AACGCCGTCAGGCCCAGCGAGCTGACAGGGGGTCTCTTCACGGCCGTTGC
CCACCCGATGACCGAGCAGCAGACGGCGAAGCAAGCCCCGCCTTCACTGG
GTCCGGAGGATGATCTCCGTCGTGATCGGTTGTACCGGCATGGAGGCGTC
CAAAACGATGATGGCCCCAAATGCCCCTTGGACCACGGCCCCCGACGTTA
CCCGCGCAAACTCAGACGCCGGTTTGGTGCCCATACTTGGTCTTTGTCAA
CCCAGGCAAGGTTGGCGTGGAGGCGCTTGGCAGGAAGGCTCGCCAGCTTT
CAAGGAGGATTGTCCGATATTGCTACTACTGTACAAGTACTGGTCTTGGG
GAGGTTGGGTGTGGTTGCCCCACCTAGACTCCAGCTCGGTGTTTATCTGG
GGACATCTCTACATCTCCTTCCCTCTGAGGTTGTTGTGCATCACCACCCA
CATCAGATGATTGCCCGGGTCCAGTACTATATGGACCTGAACTGTTGCAC
CTTAGAGTACTGTACCCGTAGTCAACACCTGTTTAGGACTGTTTCACTGT
GCAACTTGCATTGCTACGCCAGCCTGCAGGCAGTATTGCGTGGTGTAATC
TTAGGTATTAGGCATGCGTGGTCCCTGCAACTTCCACATGGCAGTGTTGG
GACGAGCTGGGCGCCCATGTCTTGGGAGCAACTCAAACTCATTACTCGTA
CTACCGAAGTACAGTACTGTAGTACATAGTTGTCTGGTGGTGGGGTGCTT
ATCGCACAAGGCACGAGGCACCGCAACTTGGCGTAGCGCTGGGGACCGTT
GTGAGCTGCACCTTCATGGTATCCTGGCGAGGATCAGCTACAACCTGCAA
GATCGGTCGCAACCCAGAGGATTTTCTTTCCCAACCAAGGTGCAACCCCG
AACGCCGCGGAGTTTTCATGCTTGTGCGTTGATAAGTGATGGCGAGAGCC
CGTCTTGACGAGTCACCGACACCAACCAGGTAACGTGGCGGCTCTGAAGC
CTCAAACTTGTTACAACGCTATAATACAAGTATGCAAGTCCGGCGTGGCA
TCTTGCACCAGCAACCTTCTCGCGGTTGGTATCTGTTTTTTTCTGCAATG
TGGCACATTCCTTCTGTGTGCATTCAAATGCCTGGCATTTTTTGC back to topCoding sequence (CDS) from alignment at S-ischiensis_contig108:95226..96870- >mRNA_S-ischiensis_contig108.1915.1 ID=mRNA_S-ischiensis_contig108.1915.1|Name=mRNA_S-ischiensis_contig108.1915.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1986bp|location=Sequence derived from alignment at S-ischiensis_contig108:95226..96870- (Schizocladia ischiensis KU_0333)
ATGGCTACAACAAACAAGCGGGGGGCAAACGCAGCTGCAGCGCGCTACAG
CGGGCTGCAGCTGAGTAGCTGTGCCATCATGGAAGGCGTTTTTCCGCGGG
GAGGCCTCAAAAGCTGCAGGCGGCGGCAAGCGCGGCGGTGCCAGCCCGCC
ACGATGCGGCGGCATGGGCGGAGGGATCCTCTGAGTCCGCCGGCAGGGCT
TCCAGTGCGTCTTCCTCACGTGGAGGGTCTGCCTCCGGCGCAGGGCCTTG
GCCCTGGATGTGCATGGCCGCCATGCCTGGTCCAGCTTGTCGCCATCTGC
CGGCGACGCCGCCAGCTCCCAGCATCATCCAAGATGGCTACAACAAACAA
GCGGGGGGCAAACGCAGCTGCAGCGCGCTACAGCGGGCTGCAGCTGAGTA
GCTGTGCCATCATGGAAGGCGTTTTTCCGCGGGGAGGCCTCAAAAGCTGC
AGGCGGCGGCAAGCGCGGCGGTGCCAGCCCGCCACGATGCGGCGGCATGG
GCGGAGGGATCCTCTGAGTCCGCCGGCAGGGCTTCCAGTGCGTCTTCCTC
ACGTGGAGGGTCTGCCTCCGGCGCAGGGCCTTGGCCCTGGATGTGCATGG
CCGCCATGCCTGGTCCAGCTTGTCGCCATCTGCCGGCGACGCCGCCAGCT
CCCAGCATCATCCAAGCAGACGGCGAAGCAAGCCCCGCCTTCACTGGGTC
CGGAGGATGATCTCCGTCGTGATCGGTTGTACCGGCATGGAGGCGTCCAA
AACGATGATGGCCCCAAATGCCCCTTGGACCACGGCCCCCGACGTTACCC
GCGCAAACTCAGACGCCGGTTTGGTGCCCATACTTGGTCTTTGTCAACCC
AGGCAAGGTTGGCGTGGAGGCGCTTGGCAGGAAGGCTCGCCAGCTTTCAA
GGAGGATTGTCCGATATTGCTACTACTGTACAAGTACTGGTCTTGGGGAG
GTTGGGTGTGGTTGCCCCACCTAGACTCCAGCTCGGTGTTTATCTGGGGA
CATCTCTACATCTCCTTCCCTCTGAGGTTGTTGTGCATCACCACCCACAT
CAGATGATTGCCCGGGTCCAGTACTATATGGACCTGAACTGTTGCACCTT
AGAGTACTGTACCCGTAGTCAACACCTGTTTAGGACTGTTTCACTGTGCA
ACTTGCATTGCTACGCCAGCCTGCAGGCAGTATTGCGTGGTGTAATCTTA
GGTATTAGGCATGCGTGGTCCCTGCAACTTCCACATGGCAGTGTTGGGAC
GAGCTGGGCGCCCATGTCTTGGGAGCAACTCAAACTCATTACTCGTACTA
CCGAAGTACAGTACTGTAGTACATAGCAGACGGCGAAGCAAGCCCCGCCT
TCACTGGGTCCGGAGGATGATCTCCGTCGTGATCGGTTGTACCGGCATGG
AGGCGTCCAAAACGATGATGGCCCCAAATGCCCCTTGGACCACGGCCCCC
GACGTTACCCGCGCAAACTCAGACGCCGGTTTGGTGCCCATACTTGGTCT
TTGTCAACCCAGGCAAGGTTGGCGTGGAGGCGCTTGGCAGGAAGGCTCGC
CAGCTTTCAAGGAGGATTGTCCGATATTGCTACTACTGTACAAGTACTGG
TCTTGGGGAGGTTGGGTGTGGTTGCCCCACCTAGACTCCAGCTCGGTGTT
TATCTGGGGACATCTCTACATCTCCTTCCCTCTGAGGTTGTTGTGCATCA
CCACCCACATCAGATGATTGCCCGGGTCCAGTACTATATGGACCTGAACT
GTTGCACCTTAGAGTACTGTACCCGTAGTCAACACCTGTTTAGGACTGTT
TCACTGTGCAACTTGCATTGCTACGCCAGCCTGCAGGCAGTATTGCGTGG
TGTAATCTTAGGTATTAGGCATGCGTGGTCCCTGCAACTTCCACATGGCA
GTGTTGGGACGAGCTGGGCGCCCATGTCTTGGGAGCAACTCAAACTCATT
ACTCGTACTACCGAAGTACAGTACTGTAGTACATAG back to top
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