mRNA_S-ischiensis_contig107.1900.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig107.1900.1 vs. uniprot
Match: F0YLV6_AURAN (Transmembrane protein 107 (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLV6_AURAN) HSP 1 Score: 137 bits (344), Expect = 8.060e-37 Identity = 66/134 (49.25%), Postives = 93/134 (69.40%), Query Frame = 2
Query: 86 LIPARFLVTLGHLIAVLMVFKTKTDNAYAGLATDPTVAQLSAAEDSVSAALALAVVCFFFDFVGIIFGLSIFMPKVNLVQVILHFVGAVLVANFITEEWDYRLLWHIVGFCNIPTVLVELGVLVAVFVLKTVSY 487
LIPARF++T+GHL+++LM+ TK +N AGL DP A+ A+ AA + + CF FD VGI+ G S+F PK NL+Q+I HF G VLV++ I + W Y+ +W +V FCN+PT L E+ +LVA+FVLK V +
Sbjct: 1 LIPARFMLTMGHLVSLLMIVYTKKENILAGLPRDPGKARYDEAKAEFEAAYVVCLACFVFDMVGILTGTSLFFPKANLLQIICHFAGGVLVSSMIAQSWQYQYIWLVVAFCNVPTALCEIAILVAIFVLKIVVF 134
BLAST of mRNA_S-ischiensis_contig107.1900.1 vs. uniprot
Match: A0A7S2UVK1_9STRA (Transmembrane protein 107 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVK1_9STRA) HSP 1 Score: 133 bits (335), Expect = 2.140e-35 Identity = 65/135 (48.15%), Postives = 95/135 (70.37%), Query Frame = 2
Query: 83 RLIPARFLVTLGHLIAVLMVFKTKTDNAYAGLATDPTVAQLSAAEDSVSAALALAVVCFFFDFVGIIFGLSIFMPKVNLVQVILHFVGAVLVANFITEEWDYRLLWHIVGFCNIPTVLVELGVLVAVFVLKTVSY 487
RLIPARFL+TLGHLI +MV + YAGL+ D T +++AA + A+ LA++CF D +G++ G +IF +VN+ Q+I HFVG + V+ FI E WDYR+LW+IV FCN+ T LVE+ V++ +FV++ + Y
Sbjct: 6 RLIPARFLITLGHLIPTVMVMYVMEEQVYAGLSADATDKEIAAATAELEGAVLLAIICFLVDLLGLVAGFTIFSTRVNVFQIIAHFVGGIQVSTFIHEVWDYRVLWYIVVFCNVTTALVEIFVILRIFVVRALLY 140
BLAST of mRNA_S-ischiensis_contig107.1900.1 vs. uniprot
Match: A0A835ZGM2_9STRA (Transmembrane protein 107 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGM2_9STRA) HSP 1 Score: 127 bits (320), Expect = 4.020e-33 Identity = 66/135 (48.89%), Postives = 88/135 (65.19%), Query Frame = 2
Query: 86 LIPARFLVTLGHLIAVLMVFKTKTDNAYAGLAT-DPTVAQLSAAEDSVSAALALAVVCFFFDFVGIIFGLSIFMPKVNLVQVILHFVGAVLVANFITEEWDYRLLWHIVGFCNIPTVLVELGVLVAVFVLKTVSY 487
LIPARFL TLGH +AVL++ +K AGLA P+ ++AA V+ AL A+ CF DF G+ FG S FMPKVN +Q+++HF G VL + + EEWDYR+ W+IV CN+P + EL V+ +F LK SY
Sbjct: 9 LIPARFLTTLGHFLAVLILAGSKATVVNAGLAGGQPSADDIAAANSEVNGALIFALFCFLLDFAGLGFGFSAFMPKVNALQILVHFAGGVLTSRLVVEEWDYRVFWYIVAMCNVPAAIAELLVMALIFGLKVYSY 143
BLAST of mRNA_S-ischiensis_contig107.1900.1 vs. uniprot
Match: A0A7S3NE17_9STRA (Transmembrane protein 107 n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NE17_9STRA) HSP 1 Score: 120 bits (301), Expect = 2.690e-30 Identity = 59/134 (44.03%), Postives = 88/134 (65.67%), Query Frame = 2
Query: 86 LIPARFLVTLGHLIAVLMVFKTKTDNAYAGLATDPTVAQLSAAEDSVSAALALAVVCFFFDFVGIIFGLSIFMPKVNLVQVILHFVGAVLVANFITEEWDYRLLWHIVGFCNIPTVLVELGVLVAVFVLKTVSY 487
LIPARF++T+GHL+A+LM+ TK +N +AGL DP+ +L A+ A L+++CF FD GI FG SIF K+NL+Q+I HF G V+V+ I + W Y+ +W I+ N PT E+ +L+A+F L + +
Sbjct: 10 LIPARFVLTVGHLVAMLMIAYTKRENLFAGLPVDPSNTRLDKAKKEFEIAYILSLICFAFDLFGIFFGTSIFFVKMNLLQIICHFTGGVMVSLMIEQAWQYQYIWLILAITNFPTAFFEIAILIAIFGLNIIVF 143
BLAST of mRNA_S-ischiensis_contig107.1900.1 vs. uniprot
Match: A0A8J2S4M7_9STRA (Transmembrane protein 107 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S4M7_9STRA) HSP 1 Score: 113 bits (282), Expect = 1.480e-27 Identity = 57/142 (40.14%), Postives = 87/142 (61.27%), Query Frame = 2
Query: 62 VSQMSTTRLIPARFLVTLGHLIAVLMVFKTKTDNAYAGLATDPTVAQLSAAEDSVSAALALAVVCFFFDFVGIIFGLSIFMPKVNLVQVILHFVGAVLVANFITEEWDYRLLWHIVGFCNIPTVLVELGVLVAVFVLKTVSY 487
+ + S LIPARFL+T+GHL++VL + T+ +N + ++ DP AQ A A+ +VCF D +GI+ G S+F PK NL+Q+I HFVG+ + + IT+ W Y+ +W + CNIP L E+ +L+ F LK V +
Sbjct: 1 MGRSSLNLLIPARFLLTVGHLVSVLTMVHTRKENLSSAVSADPKDAQ-----KEFMMAYAICLVCFAVDVLGILMGTSLFFPKANLLQIICHFVGSCFITSMITQSWQYQYIWFSIATCNIPCALCEVSILIGTFALKVVVF 137
BLAST of mRNA_S-ischiensis_contig107.1900.1 vs. uniprot
Match: A0A7S3HJZ1_9STRA (Transmembrane protein 107 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HJZ1_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 4.610e-22 Identity = 51/134 (38.06%), Postives = 81/134 (60.45%), Query Frame = 2
Query: 86 LIPARFLVTLGHLIAVLMVFKTKTDNAYAGLATDPTVAQLSAAEDSVSAALALAVVCFFFDFVGIIFGLSIFMPKVNLVQVILHFVGAVLVANFITEEWDYRLLWHIVGFCNIPTVLVELGVLVAVFVLKTVSY 487
LI ARF+ T+GH IA+L++F T +N L + + A ++ AAL + +CF DF G+ FG S+F N+ +++HF+G +L++ +T W+Y+ LW IV CNIPT L E+ +L+ + V K + Y
Sbjct: 8 LISARFITTMGHFIALLLLFSTIDNNIDESLGDNYDSEEKQWATETSWAALIIGFLCFVCDFAGLFFGTSLFYNTGNMFHILVHFIGGILLSWVVTYSWNYKALWPIVATCNIPTALYEISILLGIKVFKIIVY 141
BLAST of mRNA_S-ischiensis_contig107.1900.1 vs. uniprot
Match: D8LNF7_ECTSI (Transmembrane protein 107 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF7_ECTSI) HSP 1 Score: 95.9 bits (237), Expect = 7.780e-21 Identity = 48/76 (63.16%), Postives = 63/76 (82.89%), Query Frame = 2
Query: 83 RLIPARFLVTLGHLIAVLMVFKTKTDNAYAGLATDPTVAQLSAAEDSVSAALALAVVCFFFDFVGIIFGLSIFMPK 310
R+IPARFLVTLGHL+ V+++ KTK+DN YAGL++DPT A+++ A V+AALALA+VCF DF+ + FGLSIFM K
Sbjct: 6 RVIPARFLVTLGHLVGVILISKTKSDNVYAGLSSDPTAAEVATANGHVNAALALAMVCFGLDFMSLFFGLSIFMMK 81
BLAST of mRNA_S-ischiensis_contig107.1900.1 vs. uniprot
Match: A0A5A8C0J5_CAFRO (Transmembrane protein 107 n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C0J5_CAFRO) HSP 1 Score: 86.3 bits (212), Expect = 3.060e-17 Identity = 46/123 (37.40%), Postives = 71/123 (57.72%), Query Frame = 2
Query: 86 LIPARFLVTLGHLIAVLMVFKTKTDNAYAGLATDPTVAQLSAAEDSVSAALALAVVCFFFDFVGIIFGLSIFMPKVNLVQVILHFVGAVLVANFITEEWDYRLLWHIVGFCNIPTVLVELGVL 454
++P RF++T+G LIA L+V+ + DN +A +PT A+L AA+ SV AA A+ ++C G++ G S+FM V L+Q++ VL FI W LW+I GF I + E G++
Sbjct: 10 IVPLRFMLTVGTLIATLLVYFHRADNVAVSVAGNPTTAELQAADASVLAAWAVQLICLAISLTGLLGGFSMFMHGVGLLQIVCQLAAGVLTCLFILGSWHIAALWYITGFLGIVPAVAETGII 132
BLAST of mRNA_S-ischiensis_contig107.1900.1 vs. uniprot
Match: A0A6H5JQF3_9PHAE (Transmembrane protein 107 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQF3_9PHAE) HSP 1 Score: 74.7 bits (182), Expect = 1.010e-13 Identity = 34/60 (56.67%), Postives = 46/60 (76.67%), Query Frame = 2
Query: 308 KVNLVQVILHFVGAVLVANFITEEWDYRLLWHIVGFCNIPTVLVELGVLVAVFVLKTVSY 487
+VN +Q + HF GAVL+A+FI+E WDYR LW IVG C++PT +VE+ VL +VF LK+ Y
Sbjct: 14 RVNALQTVAHFSGAVLIAHFISEAWDYRCLWQIVGCCSVPTAIVEVAVLFSVFHLKSSVY 73
BLAST of mRNA_S-ischiensis_contig107.1900.1 vs. uniprot
Match: A0A1Y1VWT7_9FUNG (Transmembrane protein 107 n=2 Tax=Neocallimastigaceae TaxID=29007 RepID=A0A1Y1VWT7_9FUNG) HSP 1 Score: 74.7 bits (182), Expect = 6.510e-13 Identity = 42/134 (31.34%), Postives = 70/134 (52.24%), Query Frame = 2
Query: 86 LIPARFLVTLGHLIAVLMVFKTKTDNAYAGLATDPTVAQLSAAEDSVSAALALAVVCFFFDFVGIIFGLSIFMPKVNLVQVILHFVGAVLVANFITEEWDYRLLWHIVGFCNIPTVLVELGVLVAVFVLKTVSY 487
+IP+RFL T+ H+IA +MVF TK N L T S ++ + L+ CF + G G+++F K N++ LH + +L++ FI E W + + +I FC+I L+E +++ FV + Y
Sbjct: 13 IIPSRFLATIAHIIASIMVFITKEGNIRHSLPLVTTQQSYSYVNKKLTVYIILSWFCFVVELFGFFSGITMFNGKANIIHSFLHAIATILISCFIIERWHFIVYLYIFSFCSIIPALIESCLIIKSFVFHVIRY 146 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig107.1900.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig107.1900.1 >prot_S-ischiensis_contig107.1900.1 ID=prot_S-ischiensis_contig107.1900.1|Name=mRNA_S-ischiensis_contig107.1900.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=140bp MSTTRLIPARFLVTLGHLIAVLMVFKTKTDNAYAGLATDPTVAQLSAAEDback to top mRNA from alignment at S-ischiensis_contig107:83482..89271+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig107.1900.1 ID=mRNA_S-ischiensis_contig107.1900.1|Name=mRNA_S-ischiensis_contig107.1900.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=5790bp|location=Sequence derived from alignment at S-ischiensis_contig107:83482..89271+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig107:83482..89271+ >mRNA_S-ischiensis_contig107.1900.1 ID=mRNA_S-ischiensis_contig107.1900.1|Name=mRNA_S-ischiensis_contig107.1900.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=840bp|location=Sequence derived from alignment at S-ischiensis_contig107:83482..89271+ (Schizocladia ischiensis KU_0333)back to top |