mRNA_S-ischiensis_contig107.1896.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig107.1896.1 vs. uniprot
Match: D7FNB7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNB7_ECTSI) HSP 1 Score: 144 bits (364), Expect = 1.580e-38 Identity = 65/89 (73.03%), Postives = 78/89 (87.64%), Query Frame = 1
Query: 325 RRDMLMLAQPRKKLPERAVDVCCAKCKTKLYRYKKGGKGSLVKCYKERIVEDFTGGEMVCPNCGVEFARPALIHGRPALKMIGGKVFQK 591
R+ ++ +AQPRKKLPER+VDV C KC+T+LY+YKKGGKGSLVKCYKERIVEDFT G++ CPNCG FAR ++HGRPA KMIGGKV+QK
Sbjct: 131 RQGLVTMAQPRKKLPERSVDVFCQKCRTQLYKYKKGGKGSLVKCYKERIVEDFTDGKLECPNCGQLFARDTMVHGRPAFKMIGGKVYQK 219
BLAST of mRNA_S-ischiensis_contig107.1896.1 vs. uniprot
Match: A0A7S3XVU9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVU9_HETAK) HSP 1 Score: 137 bits (345), Expect = 1.560e-36 Identity = 64/96 (66.67%), Postives = 76/96 (79.17%), Query Frame = 1
Query: 304 PSTHLRQRRDMLMLAQPRKKLPERAVDVCCAKCKTKLYRYKKGGKGSLVKCYKERIVEDFTGGEMVCPNCGVEFARPALIHGRPALKMIGGKVFQK 591
P + R++ M+M+A PRKKLPE +V V C+ CKT+LY+Y K GKGSLVKCY ERIVED+T GE+ CP C EFARPA+IHGRPA KMIGGKV QK
Sbjct: 58 PCSWGRRKETMMMMAAPRKKLPEGSVKVLCSNCKTQLYKYMKNGKGSLVKCYHERIVEDYTNGELFCPECKTEFARPAMIHGRPANKMIGGKVLQK 153
BLAST of mRNA_S-ischiensis_contig107.1896.1 vs. uniprot
Match: A0A0X8LIG9_VIBFL (Uncharacterized protein n=13 Tax=Vibrio fluvialis TaxID=676 RepID=A0A0X8LIG9_VIBFL) HSP 1 Score: 125 bits (313), Expect = 1.090e-32 Identity = 55/83 (66.27%), Postives = 68/83 (81.93%), Query Frame = 1
Query: 343 LAQPRKKLPERAVDVCCAKCKTKLYRYKKGGKGSLVKCYKERIVEDFTGGEMVCPNCGVEFARPALIHGRPALKMIGGKVFQK 591
+A+PRKKLPE+ VD+ CAKC+T L +Y KGGKG+LVKC+KERI +DFT G+ CPNCG EFAR A++ G PALKM+GGKV K
Sbjct: 1 MAKPRKKLPEKVVDIYCAKCRTLLLKYHKGGKGALVKCFKERIAQDFTSGDGRCPNCGSEFARDAMVRGTPALKMVGGKVMMK 83
BLAST of mRNA_S-ischiensis_contig107.1896.1 vs. uniprot
Match: A0A1Z9XGR4_9ALTE (Uncharacterized protein n=3 Tax=Alteromonas TaxID=226 RepID=A0A1Z9XGR4_9ALTE) HSP 1 Score: 123 bits (309), Expect = 4.270e-32 Identity = 57/83 (68.67%), Postives = 68/83 (81.93%), Query Frame = 1
Query: 343 LAQPRKKLPERAVDVCCAKCKTKLYRYKKGGKGSLVKCYKERIVEDFTGGEMVCPNCGVEFARPALIHGRPALKMIGGKVFQK 591
+A+PRKK PE+ V + CAKCKT LY+YKKGGKG+LVKC+KERIVEDFT E +CPNC +FAR +LI G P+LKMIGGKV K
Sbjct: 1 MAKPRKKAPEKTVQIYCAKCKTLLYKYKKGGKGALVKCFKERIVEDFTKEEGICPNCEQQFARDSLIRGTPSLKMIGGKVNMK 83
BLAST of mRNA_S-ischiensis_contig107.1896.1 vs. uniprot
Match: UPI00192BA345 (hypothetical protein n=4 Tax=Vibrio fluvialis TaxID=676 RepID=UPI00192BA345) HSP 1 Score: 123 bits (308), Expect = 6.020e-32 Identity = 55/83 (66.27%), Postives = 67/83 (80.72%), Query Frame = 1
Query: 343 LAQPRKKLPERAVDVCCAKCKTKLYRYKKGGKGSLVKCYKERIVEDFTGGEMVCPNCGVEFARPALIHGRPALKMIGGKVFQK 591
+A+PRKKLPE+ VD+ CAKC+ L +Y KGGKG+LVKC+KERI +DFT G+ CPNCG EFAR A+I G PALKM+GGKV K
Sbjct: 1 MAKPRKKLPEKVVDIYCAKCRILLLKYHKGGKGALVKCFKERIAQDFTSGDGRCPNCGSEFARDAMIRGTPALKMVGGKVMMK 83
BLAST of mRNA_S-ischiensis_contig107.1896.1 vs. uniprot
Match: A0A0G4GPL3_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GPL3_VITBC) HSP 1 Score: 125 bits (313), Expect = 9.410e-32 Identity = 60/85 (70.59%), Postives = 68/85 (80.00%), Query Frame = 1
Query: 337 LMLAQPRKKLPERAVDVCCAKCKTKLYRYKKGGKGSLVKCYKERIVEDFTGGEMVCPNCGVEFARPALIHGRPALKMIGGKVFQK 591
++ AQPRK+LPER V CAKC LYRYKKGGKG+LVKCY+ERIVEDFT G++ C +CG EFAR LIHGRPA KMIGGKV K
Sbjct: 71 ILNAQPRKRLPERTAFVHCAKCGELLYRYKKGGKGTLVKCYEERIVEDFTNGDLTCHSCGSEFARRTLIHGRPAHKMIGGKVTLK 155
BLAST of mRNA_S-ischiensis_contig107.1896.1 vs. uniprot
Match: A0A2K8XYR5_9ALTE (Uncharacterized protein n=3 Tax=Alteromonas TaxID=226 RepID=A0A2K8XYR5_9ALTE) HSP 1 Score: 122 bits (306), Expect = 1.190e-31 Identity = 56/83 (67.47%), Postives = 68/83 (81.93%), Query Frame = 1
Query: 343 LAQPRKKLPERAVDVCCAKCKTKLYRYKKGGKGSLVKCYKERIVEDFTGGEMVCPNCGVEFARPALIHGRPALKMIGGKVFQK 591
+A+PRKK P++ V + CAKCK +LY+YKKGGKG+LVKC+KERIVED+T E +CPNC +FAR ALI G PALKMIGGKV K
Sbjct: 1 MAKPRKKGPQKTVQIYCAKCKEQLYKYKKGGKGALVKCFKERIVEDYTMSEGICPNCNQQFARDALIRGAPALKMIGGKVNMK 83
BLAST of mRNA_S-ischiensis_contig107.1896.1 vs. uniprot
Match: A9DD79_9GAMM (Uncharacterized protein n=2 Tax=Shewanella benthica TaxID=43661 RepID=A9DD79_9GAMM) HSP 1 Score: 118 bits (296), Expect = 3.650e-30 Identity = 53/80 (66.25%), Postives = 64/80 (80.00%), Query Frame = 1
Query: 343 LAQPRKKLPERAVDVCCAKCKTKLYRYKKGGKGSLVKCYKERIVEDFTGGEMVCPNCGVEFARPALIHGRPALKMIGGKV 582
+A+P KK P R VD+ CAKCKT+L++Y+KGGKG+LVKC+KERIV DFT +CPNCG EFAR L+ G PA KMIGGKV
Sbjct: 1 MAKPNKKGPTRTVDIFCAKCKTQLFKYRKGGKGALVKCFKERIVADFTHTPCICPNCGQEFARDTLVRGTPAFKMIGGKV 80
BLAST of mRNA_S-ischiensis_contig107.1896.1 vs. uniprot
Match: A0A432W1W6_9GAMM (Uncharacterized protein n=2 Tax=Idiomarinaceae TaxID=267893 RepID=A0A432W1W6_9GAMM) HSP 1 Score: 117 bits (294), Expect = 7.230e-30 Identity = 54/83 (65.06%), Postives = 64/83 (77.11%), Query Frame = 1
Query: 343 LAQPRKKLPERAVDVCCAKCKTKLYRYKKGGKGSLVKCYKERIVEDFTGGEMVCPNCGVEFARPALIHGRPALKMIGGKVFQK 591
+A+PRKKLP RAVD+ CA CKTKL++Y+KGGKG+L+KC+ ERI EDFT CPNC EFAR +I G PA KMIGGKV K
Sbjct: 1 MAKPRKKLPARAVDIFCANCKTKLFKYRKGGKGALIKCFVERITEDFTTTPCHCPNCQQEFARETMIRGAPAFKMIGGKVTHK 83
BLAST of mRNA_S-ischiensis_contig107.1896.1 vs. uniprot
Match: A0A5J4XUP5_9CHLO (Uncharacterized protein (Fragment) n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XUP5_9CHLO) HSP 1 Score: 117 bits (293), Expect = 1.170e-29 Identity = 53/79 (67.09%), Postives = 65/79 (82.28%), Query Frame = 1
Query: 346 AQPRKKLPERAVDVCCAKCKTKLYRYKKGGKGSLVKCYKERIVEDFTGGEMVCPNCGVEFARPALIHGRPALKMIGGKV 582
AQP KK P++ V V CA+C+ +LY+YKKGGKGSLVKC+ ERIVED T G++ CP CG EFARPA+I G+PA K+IGGKV
Sbjct: 6 AQPSKKGPDKTVKVYCARCQEQLYKYKKGGKGSLVKCFVERIVEDATAGDLKCPECGTEFARPAMIRGKPANKIIGGKV 84 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig107.1896.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig107.1896.1 >prot_S-ischiensis_contig107.1896.1 ID=prot_S-ischiensis_contig107.1896.1|Name=mRNA_S-ischiensis_contig107.1896.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=196bp MMLPILGLHAREGRGRVGAWMAWTVAHWMVWAAYGLVRVQGWHHYSYTHRback to top mRNA from alignment at S-ischiensis_contig107:47949..52927- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig107.1896.1 ID=mRNA_S-ischiensis_contig107.1896.1|Name=mRNA_S-ischiensis_contig107.1896.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4979bp|location=Sequence derived from alignment at S-ischiensis_contig107:47949..52927- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig107:47949..52927- >mRNA_S-ischiensis_contig107.1896.1 ID=mRNA_S-ischiensis_contig107.1896.1|Name=mRNA_S-ischiensis_contig107.1896.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1176bp|location=Sequence derived from alignment at S-ischiensis_contig107:47949..52927- (Schizocladia ischiensis KU_0333)back to top |