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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 6 |
| Model size | 874 |
| Cds size | 873 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815569.5538154-CDS-S-ischiensis_contig107:3950..4073 | 1622815569.5538154-CDS-S-ischiensis_contig107:3950..4073 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig107 3951..4073 - |
| 1695739776.2352073-CDS-S-ischiensis_contig107:3950..4073 | 1695739776.2352073-CDS-S-ischiensis_contig107:3950..4073 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig107 3951..4073 - |
| 1622815569.5659788-CDS-S-ischiensis_contig107:4435..4561 | 1622815569.5659788-CDS-S-ischiensis_contig107:4435..4561 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig107 4436..4561 - |
| 1695739776.243565-CDS-S-ischiensis_contig107:4435..4561 | 1695739776.243565-CDS-S-ischiensis_contig107:4435..4561 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig107 4436..4561 - |
| 1622815569.5784492-CDS-S-ischiensis_contig107:5012..5135 | 1622815569.5784492-CDS-S-ischiensis_contig107:5012..5135 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig107 5013..5135 - |
| 1695739776.2520983-CDS-S-ischiensis_contig107:5012..5135 | 1695739776.2520983-CDS-S-ischiensis_contig107:5012..5135 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig107 5013..5135 - |
| 1622815569.5908685-CDS-S-ischiensis_contig107:6518..6783 | 1622815569.5908685-CDS-S-ischiensis_contig107:6518..6783 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig107 6519..6783 - |
| 1695739776.2633739-CDS-S-ischiensis_contig107:6518..6783 | 1695739776.2633739-CDS-S-ischiensis_contig107:6518..6783 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig107 6519..6783 - |
| 1622815569.6032703-CDS-S-ischiensis_contig107:8208..8331 | 1622815569.6032703-CDS-S-ischiensis_contig107:8208..8331 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig107 8209..8331 - |
| 1695739776.2723656-CDS-S-ischiensis_contig107:8208..8331 | 1695739776.2723656-CDS-S-ischiensis_contig107:8208..8331 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig107 8209..8331 - |
| 1622815569.6146116-CDS-S-ischiensis_contig107:9665..9778 | 1622815569.6146116-CDS-S-ischiensis_contig107:9665..9778 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig107 9666..9778 - |
| 1695739776.2800698-CDS-S-ischiensis_contig107:9665..9778 | 1695739776.2800698-CDS-S-ischiensis_contig107:9665..9778 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig107 9666..9778 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig107.1889.1 >prot_S-ischiensis_contig107.1889.1 ID=prot_S-ischiensis_contig107.1889.1|Name=mRNA_S-ischiensis_contig107.1889.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=291bp
WKVPSSRNGGWGRPRAGGDGGLEAEEAREKERADKLARYQEHQLLSDGVD
RARADVGHLQSSNESLRLKVLRAEQSVAAAQRTNAVLRKAAEKARAAAHT
TASGGGSGGNSGGGVSGSDAGGGGSGYGGVRGSSRSGRGAGGGNSGVEPD
PVSASREKLHHVEDMHKVLVEERRKKVVRCQALQDEADRDCKTLEDVRAK
IDRAWERQERHRLLRETAAASAPPEPGQEFVGPTAGEPSEEAAAVEEAQQ
VAASLRVEIEALRLGTSLGLGTSTPGSAAGLGAQPGAGHGG back to topmRNA from alignment at S-ischiensis_contig107:3950..9778- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig107.1889.1 ID=mRNA_S-ischiensis_contig107.1889.1|Name=mRNA_S-ischiensis_contig107.1889.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=5829bp|location=Sequence derived from alignment at S-ischiensis_contig107:3950..9778- (Schizocladia ischiensis KU_0333)
TGGAAAGTGCCCTCTAGCCGCAATGGGGGTTGGGGGAGGCCCCGCGCCGG
CGGCGATGGGGGTTTGGAGGCGGAGGAGGCGCGGGAGAAAGAAAGGGCCG
ATAAACTGGCCAGGTGCGTGAGTTGCAGTGATGGAATATCGACCCGATAT
GTTATGTAGAGTGCATTGGCAAAATATATGTACGAGTATACTAAAGTATA
GATTTTTATTATCTACGAAGTATATCGATATATCAACATAGTGACACTAT
ACCGTATACTAATATAGCTGTTGTTCTAAATATTAACATTCGATGTTCTA
TATCTGGTGAGGTGTGCTCATGCTCGGAAGGGGGGCTGCTGTCACACCTG
ATGGGCATTGACAGGAACAACACAGAGCGAGGTGCGGGCCACGTCACTGA
AGACCTCAGCAGTGGCCCTTCCTTATCTCGCCAGGGGAAGTTTGTGTGGG
GAAGGCACGTCGTGACTGTGCATGTGTGTTGTATGCCTCCTCTCCCTGGG
GTAGCCTGCCATGTACTAAGTAGGTGGCATGTGTCATGTATCTAGAAGTA
CTGTACCTGTAGGCAGGGGAAGCGGTTTGTGCAACAGCGACTCCATGCTT
CCAGGTGGTGTGCATGCACATATACAAGTATGTAGTACTTCAAAGCATGC
CATACTGCTGTATGTGGTACTTCGAAGTATGCTATACTTGCCAAGTACAT
ATCGTGCTTGTACTACAAATGTGTACTTGTGCTTAAGCGTTACTTCCGTG
GCTGTGGGCCCTGCACAGTTGGTCAAGAGTAGGAAGAGACTATGAAAAGC
ACAGATTTGAGTGCATAAATCTTGGAAATAAACAACTGCTGCAAAAAGTA
CTACAGCACTTCCAGCATGTACTTGTGCACCTTATGCATACTACGGTAGT
ACTAGGCAACACCGATGTCAAGTACTTGGCATGTGGCCGGAAAGTACGGG
GGCTGCTGCTTACGGTAAATTTCTCTTCTTCGTGGTGTGGCTCCGCTGTG
CCTCTCAGGTCTTGTAGGTATACATCACAAGAGACCGCCCCTTGGTGTTT
GCTTGTCTCCCATGTGAGTGAGTGGAACACTTGTTGTAGTCTGGGAAGTG
ATGCAGCAAACCCCTGGTGTATAGTATCTACTACTTCGAAAAAAAAAAGG
TGTCTGTAGTACCTGTAACCCGTACAACAACTGGCAAACCCCAGCTGTAC
GAGTATCTACTACTTCGAAAAAAAAAAGGTGTCTGTAGTACCTGTAACCC
GTACAACAACTGGCAAACCCCAGCTGTACGAGTATCTACTGAAAGGTAGT
ACAAACAGGAGAACACAGCACACAATGCACTCAGACTACTGTCTGATAAC
AGCTGCAACACACAACAACAACTGGCAGGTCGACCTGTAACAGCTACAAT
ATGCACTAAACCCTAACCTAGCCCTGCAATACAACAACAACTGGCAGGTA
CCAGGAGCACCAGCTATTGTCGGACGGAGTGGACCGGGCCCGTGCAGACG
TTGGCCACCTGCAGTCCAGCAATGAATCCCTCAGGCTGAAAGTCTTGAGG
GCGGAGCAGAGCGTAGCCGCGTGAGTACAGGAGTTGAAGTTTTGATCTTC
AGTAGGCGTCTTCAACGATTAATGTTCGTTAATCCTACATCCCCTACGGT
GGAGACGTTGTGCGGGGCACTAACACAAACAAGTGTCGGTACTACTGATA
CAAGCATAGTACAAGCTGGTTCAGCAAAAAAAACACCAAAATCTGTCAGC
GGCCTTTCTTGAGAACGGCACCGAATTGAGGCCAAATGCGCGTACCGACA
TGGTTGTGTGGTCCAGACGAAGAGATTGATGTGTTCGCTGGCCGTGGAGT
GCCGCTTGTGTTGCTATGAATGAGTAAGAACCATTTTCGTCGACTGTAGC
GGCTATTTTCGGCGAACGTGTACTGTAGAGCAAAAATCTCACTCGACAAA
CCTGAGTTGGGTGGTGCTGTTTTGCACTCTTGTTCTTTATAGTAAAAAAA
CTTGACTGCCATCGCCAAAAACAACAATAATTATTTCAGTCAAGAATGAC
GTCGAAAAGAAAGCTACATTCAGGGTATTTGCAATATTTCGCGTCTTTTT
CATTTTTTTACTGGCTACGTCAGTCAATTTTCAAATTCGGTGGCAAGGAA
CGCGCATGCAAAACAGCACCTCTCAACTCCAAAAACTCGTGTGAGAATTC
CGTACGGAAGGTTTTTGGCCCGACTTGCCCGAACCAGCTCGTATGGTGTA
CGCCACCAATAGGTGACCCGCTGCCCTAGCGCTGAGTTTTTGTGCGCTGG
TCTGGGTCACGGGTAGTAGATTTCTCGGTTGATCAGTCCGATACCAATAC
GAAGTACCCGTATGTGTTTTCCATACGCCGTCTTCACTCGTGCACCAATA
TCAAGTTCTGCCCACCTTGTGAGTGCTACTGACATTACAGTACATTGCCT
GTCCCATGCCCGTCACAAACCAACACAAGCCGCGGCATGCCGCCAATGGA
AATTGCGTGGTCTCGCAGTCATGTGTATGCCTCACCGTTGAGAGCGGTAA
ACAAGAACTACTCAACAGTAGATACAGAGCAGGGAAGCACTGCACTTCAA
CAAGAGCCCTTTATATTTGAGCAGGAGACCCGCATTTCTGACACTGCTGT
AGAACCCGGAACCATCCCATGCCTGGACCTGGTGACTACAGTACAGTTCT
TTCAACCTACGTACATTAGTTCCTCGATTTTGGGCACAGTACAGTTGTTT
CAACATACTTGGTTCCTATATTTTGAGGTTACGCCGGCACAAAGAACGCT
TGAAGGCGAGTGAAAGAAAGGCTTCCGGGGGTGGGATTTAGACCATCGCG
TAAGCAGGAACACTCTTCTTTTCCACTCGCTTGCTTATCTTCATGCAAGA
AACACTTGGACCAGGATCGCTTTACCCTAACCCCACAGCGCACAAAACCA
AGTCTCCCTGCCCGCATACCACACCGTAAACCCATCCTTACACAGTGCGC
AGAGGACCAACGCCGTGCTGAGGAAGGCTGCTGAGAAGGCCCGGGCCGCA
GCACATACAACCGCAAGTGGAGGTGGCAGCGGTGGCAATTCGGGAGGCGG
AGTCAGCGGTAGCGATGCGGGCGGTGGAGGCAGCGGTTATGGGGGAGTTA
GAGGAAGCAGCAGGAGCGGCAGAGGAGCCGGGGGTGGCAACAGCGGCGTG
GAGCCGGACCCAGTTTCGGCGAGCAGGGAGAAGCTGCATCACGTGGAGGA
CATGCACAAGGTACTTATACTTCCACGTACTATAGCAACACTTCTGCATT
GCCGGGTACAACTGTAGACTACTGCGCATTAGCATTTCAAGCATGTGGGG
ACCCACACGAAGGAATGGCAATTGCACCAGTACTATAGCAACAGTACTCA
TTGTACAACTGCAGGCTACATTGCAATAGCAAATCAAGCATGTGGGGACC
CGCACAAGGCAATCACCCGGGCATGATTGGTCCGGGGCTGAAGCGGACGA
GACTCTCTTGTTTCAGGAATCCGCAGCATACATAGTTCGAGAGAGCAGTG
CACATCAGTGATGGTATATCGACCCGATTTGTTGTGTATTTCGACAAATT
TATGAATATAACGATTTTGTTGTATACATTGATATATCGACATTGTGATA
TCATGGCCCGTACTAAAACCAAGTAGTTTCTTCCATGGGAGCCGTTTGCC
CAGGTGGTCGCTGACTCTCGAAAGATATTAATAGGAATACATCAGTCGAT
ATAACGTCGACATATGCGGCGACCATTACATCTATTGGATATAGTGTGTT
GTGATATACGCTATATATTTTATTATTCGGTATTCCACCACTGGTTGGTG
CCCATGTCGTGGTAGTAGCGTCCAGGCCAGCCTGGGAAGTTTGTTGGGCA
ATCCACCCTCCAGGCAACAACTTGTGCTGTGCTTCAAAGAAATGCAAAGC
CACGGCACCTGAAATGCCATAAGCGGTCCATGTTGGCCGCAAGCACTTCA
AGTGCAGTGCTGGAAATACAAAACACTTGAACAATGATCTCGTGGGTACG
ACAAGCACGACGCCAGTACGCGCACACACACATGTACTCTAGGCAGGTAC
GAGTATAGTGCAGATGTCTCATGTATGTGCGCACAAAAGCCCCGCGTGCA
TTAGAGATTTCTCCTGGGCTTGGATATTTGAGGCTTTGTTGTGCCCGCGA
CGTTGCGCTGACATTTACTTGGGCAATCACGGTTTGAAACAAACGCTGGG
AAGAAATATTTACGCATGGATGGCAGCGCCGCATTTTTCTGAAGGTTGGT
GCAGGGCAGATGCGGTTGCACAGGCTTCAATTTTGTGACACCGCATACCT
CAGGCAAGAGGTCTCCTGCGGAATGTACTTGGAAGTAGTCGTTTTCTTGG
ACCATTGTGCTTCGTGTGGTTAGAAAGGAGGGAGTTTCAACCACCCACAT
CTATGCCTTTTCAAGCTCGCAGTGCTGCACCAGCTATATGTCCTAACCCT
AACCCTAACCCGGCATACTTGCAGAGGTTGACGGGCCCACGAATGGGGGA
AGAAGAGCGACGGAAGAAGGTGGTGGGATGCCAAGGTTAGGGGAATACCC
AACCCTTACATTACCCTCATCCTCCCTGTTGCTGGCCTGCAAGGTGCTGG
TAGAAGAGCGACGGAAGAAGGTGGTGCGATGCCAGGCGCTCCAAGACGAG
GCGGACAGGGATTGCAAGACCCTTGAGGATGTCAGGGCGAAAATCGACAG
AGCCTGGGAACGACAGGTGTGAACTACCCATCACATGGACAGTCTATCCT
TCTCTGCAGCCCAACTGCTGTTTATTTTAAGGGCTTAGGCGTGTTATATA
CGAGTACAACACTTGACGCACTTGCAATAGTAGTTCCGGGCGCATGAACA
CATGGACAGTATTTCAATCTCAGTGGAGAATTGCAAGTTCTTTGGGCTTT
TCTTTTTTTGCAGAAAAGCACTCAAGTACAATATTCAAGAAACTACCTCG
TCAGCGAATGTGAGAAACAGTCCGTGGCGTCAACTGCAATGCAATCAAGC
TTGTCACCATCCGTGTCACGGGGTATCAGAACACAACAAGGCATGTTCAT
GTACCTTGGGGATGAAATATGCTGTGCACTGTGCCAAGTACCTAGTTGCA
TGCCCTGTGAGTGTGAAGGAAGACTGATCATCCCTCCTGTACAATCTTGG
TGTGCACGGCTTGCCAGGAACGGCATCGTCTCCTCCGCGAGACTGCAGCT
GCTTCAGCACCTCCCGAACCGGGGCAAGAGTTTGTGGGGCCTACAGCTGG
CGAACCTTCGGAGGAGGCGGCGGCTGTGGAGGAGGCCCAGCAGGTCTGCA
ATCATACGAAGTAGCACACCTCCCGTGAAATGGCTATGATTCAAATAAAT
TGTAAAGAGGTGCAATCGCACGTGTGTGAGATTGACTGTTCTCGTATTAG
TTGTTGTCCCATTTAAGAAACGAGTGTTCTTGTATCAGTGGCTATCACAT
CAGGGAACTAAAAACAAGGAGGGGGGGGGAAGGGAAAACAGAGGGGAGGG
GAAAGATGAAATGGCTACAGTGTGATTGTCGCTCGAAGGCCTTGCCAATT
AGTGTGCGCCGCACCTTGGGATGACAACGCTCTGCTCACGCACCACTAAG
TGATTGCTCACGCACCACTAAGTGAATTTTCTGCGTGGTGCATGGTGTGT
TGCAGGTGGCAGCAAGTCTGCGGGTGGAAATAGAGGCCCTGCGCCTGGGA
ACATCGTTAGGCCTTGGTACAAGTACGCCAGGCTCGGCGGCGGGGCTGGG
GGCACAGCCAGGAGCCGGGCATGGCGGAG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig107:3950..9778- >mRNA_S-ischiensis_contig107.1889.1 ID=mRNA_S-ischiensis_contig107.1889.1|Name=mRNA_S-ischiensis_contig107.1889.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1746bp|location=Sequence derived from alignment at S-ischiensis_contig107:3950..9778- (Schizocladia ischiensis KU_0333)
TGGAAAGTGCCCTCTAGCCGCAATGGGGGTTGGGGGAGGCCCCGCGCCGG
CGGCGATGGGGGTTTGGAGGCGGAGGAGGCGCGGGAGAAAGAAAGGGCCG
ATAAACTGGCCAGTGGAAAGTGCCCTCTAGCCGCAATGGGGGTTGGGGGA
GGCCCCGCGCCGGCGGCGATGGGGGTTTGGAGGCGGAGGAGGCGCGGGAG
AAAGAAAGGGCCGATAAACTGGCCAGGTACCAGGAGCACCAGCTATTGTC
GGACGGAGTGGACCGGGCCCGTGCAGACGTTGGCCACCTGCAGTCCAGCA
ATGAATCCCTCAGGCTGAAAGTCTTGAGGGCGGAGCAGAGCGTAGCCGCG
TACCAGGAGCACCAGCTATTGTCGGACGGAGTGGACCGGGCCCGTGCAGA
CGTTGGCCACCTGCAGTCCAGCAATGAATCCCTCAGGCTGAAAGTCTTGA
GGGCGGAGCAGAGCGTAGCCGCTGCGCAGAGGACCAACGCCGTGCTGAGG
AAGGCTGCTGAGAAGGCCCGGGCCGCAGCACATACAACCGCAAGTGGAGG
TGGCAGCGGTGGCAATTCGGGAGGCGGAGTCAGCGGTAGCGATGCGGGCG
GTGGAGGCAGCGGTTATGGGGGAGTTAGAGGAAGCAGCAGGAGCGGCAGA
GGAGCCGGGGGTGGCAACAGCGGCGTGGAGCCGGACCCAGTTTCGGCGAG
CAGGGAGAAGCTGCATCACGTGGAGGACATGCACAAGTGCGCAGAGGACC
AACGCCGTGCTGAGGAAGGCTGCTGAGAAGGCCCGGGCCGCAGCACATAC
AACCGCAAGTGGAGGTGGCAGCGGTGGCAATTCGGGAGGCGGAGTCAGCG
GTAGCGATGCGGGCGGTGGAGGCAGCGGTTATGGGGGAGTTAGAGGAAGC
AGCAGGAGCGGCAGAGGAGCCGGGGGTGGCAACAGCGGCGTGGAGCCGGA
CCCAGTTTCGGCGAGCAGGGAGAAGCTGCATCACGTGGAGGACATGCACA
AGGTGCTGGTAGAAGAGCGACGGAAGAAGGTGGTGCGATGCCAGGCGCTC
CAAGACGAGGCGGACAGGGATTGCAAGACCCTTGAGGATGTCAGGGCGAA
AATCGACAGAGCCTGGGAACGACAGGTGCTGGTAGAAGAGCGACGGAAGA
AGGTGGTGCGATGCCAGGCGCTCCAAGACGAGGCGGACAGGGATTGCAAG
ACCCTTGAGGATGTCAGGGCGAAAATCGACAGAGCCTGGGAACGACAGGA
ACGGCATCGTCTCCTCCGCGAGACTGCAGCTGCTTCAGCACCTCCCGAAC
CGGGGCAAGAGTTTGTGGGGCCTACAGCTGGCGAACCTTCGGAGGAGGCG
GCGGCTGTGGAGGAGGCCCAGCAGGAACGGCATCGTCTCCTCCGCGAGAC
TGCAGCTGCTTCAGCACCTCCCGAACCGGGGCAAGAGTTTGTGGGGCCTA
CAGCTGGCGAACCTTCGGAGGAGGCGGCGGCTGTGGAGGAGGCCCAGCAG
GTGGCAGCAAGTCTGCGGGTGGAAATAGAGGCCCTGCGCCTGGGAACATC
GTTAGGCCTTGGTACAAGTACGCCAGGCTCGGCGGCGGGGCTGGGGGCAC
AGCCAGGAGCCGGGCATGGCGGAGTGGCAGCAAGTCTGCGGGTGGAAATA
GAGGCCCTGCGCCTGGGAACATCGTTAGGCCTTGGTACAAGTACGCCAGG
CTCGGCGGCGGGGCTGGGGGCACAGCCAGGAGCCGGGCATGGCGGA back to top
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