mRNA_S-ischiensis_contig106.1888.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig106.1888.1 vs. uniprot
Match: D7FQJ6_ECTSI (Early-responsive to dehydration protein-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQJ6_ECTSI) HSP 1 Score: 164 bits (416), Expect = 1.010e-44 Identity = 76/121 (62.81%), Postives = 102/121 (84.30%), Query Frame = 1
Query: 1 QIFSLFSIYGLAVILPTNLQGGMGSSDSAKTTINTFNQLSMSNIRHYDGRMWVHAAGLWLLTFVAMYHLVVEYRFYTALRHKFLRRKAAHMRTIVVEGVPKDMRSNFKLFTYFNTLYPGEV 363
++F+LF+ YGL V++P N+ S+ A+T INTFN+LSMSN++HY+ MW+HA G++LL+ +AMY LVVEYR+YT LRH+FLRRK+AH+RTIVV+GVP++MRS+ KLFTYFNTLYP EV
Sbjct: 137 KVFALFAPYGLLVLIPVNVMETPSDSNQAQTNINTFNRLSMSNVQHYNPCMWLHALGIYLLSALAMYFLVVEYRYYTNLRHRFLRRKSAHLRTIVVQGVPREMRSDSKLFTYFNTLYPEEV 257
BLAST of mRNA_S-ischiensis_contig106.1888.1 vs. uniprot
Match: A0A7S3UXJ8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXJ8_HETAK) HSP 1 Score: 112 bits (279), Expect = 6.200e-27 Identity = 55/121 (45.45%), Postives = 76/121 (62.81%), Query Frame = 1
Query: 1 QIFSLFSIYGLAVILPTNLQGGMGSSDSAKTTINTFNQLSMSNIRHYDGRMWVHAAGLWLLTFVAMYHLVVEYRFYTALRHKFLRRKAAHMRTIVVEGVPKDMRSNFKLFTYFNTLYPGEV 363
+IF +F++YGL V++P N G G FN L++SNI MW H G++LLT + M+ LVVE+R YT LRH+FLRR+ A R+++VE VP+ +RS L YF LYPG+V
Sbjct: 104 RIFGIFAVYGLCVLIPVNALGSNGEQS-------LFNTLTLSNIADGSNTMWFHVVGMYLLTAITMWQLVVEFRTYTRLRHEFLRRRRALFRSVLVEEVPRPLRSQATLRAYFEKLYPGQV 217
BLAST of mRNA_S-ischiensis_contig106.1888.1 vs. uniprot
Match: A0A836CHQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHQ4_9STRA) HSP 1 Score: 110 bits (274), Expect = 1.390e-25 Identity = 57/126 (45.24%), Postives = 78/126 (61.90%), Query Frame = 1
Query: 1 QIFSLFSIYGLAVILPTNLQGGMGSSDSAKTTINTFNQLSMSNIRHYDGR-----------------------------MWVHAAGLWLLTFVAMYHLVVEYRFYTALRHKFLRRKAAHMRTIVVE 291
++F +F++YGLAVI+P N+ GG +S +T+IN+FNQLSMSNI+HYD + MWVHA G++LLT + Y L VE+RFY LRH++L R+A H+RTIVVE
Sbjct: 143 KVFGIFALYGLAVIIPANIAGGQRNSFRVQTSINSFNQLSMSNIQHYDSKASALCIRRTSALKLAIVTEHCSSRLAELQMWVHAFGVYLLTALVQYFLYVEFRFYKQLRHEYLMRRAPHLRTIVVE 268
BLAST of mRNA_S-ischiensis_contig106.1888.1 vs. uniprot
Match: A0A7S2W8T3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W8T3_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 3.290e-23 Identity = 45/117 (38.46%), Postives = 70/117 (59.83%), Query Frame = 1
Query: 7 FSLFSIYGLAVILPTNLQGGMGSSDSAKTTINTFNQLSMSNIRHYDGRMWVHAAGLWLLTFVAMYHLVVEYRFYTALRHKFLRRKAAHMRTIVVEGVPKDMRSNFKLFTYFNTLYPG 357
FS F++ G ++LP NL S ++ T+NTF Q +MSN+ D R+WVH A + L+ + + L E YT LRH +L ++ + TI+VE +P+ +RS +L YF+ +YPG
Sbjct: 1 FSSFAVVGFGIVLPVNLSCSYWGSQTSIETLNTFMQCTMSNVPAQDRRLWVHVAASFFLSMLTLRFLAAECESYTKLRHVYLGTQSVALHTILVERIPRQLRSQIRLAAYFSRMYPG 117
BLAST of mRNA_S-ischiensis_contig106.1888.1 vs. uniprot
Match: A0A835Z3W6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3W6_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 1.510e-21 Identity = 49/121 (40.50%), Postives = 74/121 (61.16%), Query Frame = 1
Query: 1 QIFSLFSIYGLAVILPTNLQGGMGSSDSAKTTINTFNQLSMSNIRHYDGRMWVHAAGLWLLTFVAMYHLVVEYRFYTALRHKFLRRKAAHMRTIVVEGVPKDMRSNFKLFTYFNTLYPGEV 363
+I + ++Y L V+LP N+ G + + A N+F+ LSMSN+ +WVHA G L+T A + L E+ YT LRH +L+ +A HMRTI++E VP +MR +++ YFN LYP +
Sbjct: 7 KISAATAVYALCVVLPVNVVGDNLTDEEASA--NSFSLLSMSNVAPGSATLWVHAVGTLLMTIAAFFFLNGEFTTYTRLRHAYLKMRAPHMRTILLEDVPAEMRGAAQIYIYFNHLYPNSI 125
BLAST of mRNA_S-ischiensis_contig106.1888.1 vs. uniprot
Match: A0A6P8HPT7_ACTTE (CSC1-like protein ERD4 isoform X1 n=2 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HPT7_ACTTE) HSP 1 Score: 77.8 bits (190), Expect = 2.890e-14 Identity = 37/113 (32.74%), Postives = 62/113 (54.87%), Query Frame = 1
Query: 25 YGLAVILPTNLQGGMGSSDSAKTTINTFNQLSMSNIRHYDGRMWVHAAGLWLLTFVAMYHLVVEYRFYTALRHKFLRRKAAHMRTIVVEGVPKDMRSNFKLFTYFNTLYPGEV 363
YGLAV+LP N+ GG+G + +K L+MSN++ +MW H +W+ T V Y L E+R + R ++L + H +++ +PK +R + TY + L+P +V
Sbjct: 128 YGLAVLLPLNVYGGVGLAGLSK--------LTMSNLKENSSKMWAHFVAVWVYTLVIFYMLYEEWRVFVVYRQEYLAKGLDHQYAVLLRDLPKRLRKEENMKTYVDELFPSQV 232
BLAST of mRNA_S-ischiensis_contig106.1888.1 vs. uniprot
Match: A0A7S1VIW9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VIW9_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 1.370e-10 Identity = 33/88 (37.50%), Postives = 52/88 (59.09%), Query Frame = 1
Query: 115 LSMSNIRHYDGRMWVHAAGLWLLTFVAMYHLVVEYRFYTALRHKFLRRKAAHMR-----TIVVEGVPKDMRSNFKLFTYFNTLYPGEV 363
LSM+N+++ ++W LWLLTF ++ + EY+ Y R +FL + A T++VE VPK++RS+ L YF L+PG+V
Sbjct: 2 LSMANLQNGSWKLWFPTIFLWLLTFYVVFMMNEEYKHYVECRMEFLAKGDARTHPQQRYTLLVEQVPKELRSDLALKEYFGQLFPGKV 89
BLAST of mRNA_S-ischiensis_contig106.1888.1 vs. uniprot
Match: A7SQ88_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SQ88_NEMVE) HSP 1 Score: 66.6 bits (161), Expect = 2.000e-10 Identity = 34/113 (30.09%), Postives = 56/113 (49.56%), Query Frame = 1
Query: 25 YGLAVILPTNLQGGMGSSDSAKTTINTFNQLSMSNIRHYDGRMWVHAAGLWLLTFVAMYHLVVEYRFYTALRHKFLRRKAAHMRTIVVEGVPKDMRSNFKLFTYFNTLYPGEV 363
YG+ V+LP NL GG+ S K L+MSN+ + W H G+W T + Y L E++ Y R K L + H +++ G+ +++ L Y + ++PG+V
Sbjct: 142 YGIIVLLPLNLHGGLHLSGLDK--------LTMSNMHEKSTKAWAHLVGVWAYTLIICYLLYKEWQVYLVYRRKHLAKGLPHQYAVLLRGLTSKLKNRETLRKYADGIFPGQV 246
BLAST of mRNA_S-ischiensis_contig106.1888.1 vs. uniprot
Match: A0A372QKM0_9GLOM (Late exocytosis, associated with Golgi transport-domain-containing protein n=1 Tax=Rhizophagus sp. MUCL 43196 TaxID=1803374 RepID=A0A372QKM0_9GLOM) HSP 1 Score: 60.8 bits (146), Expect = 2.500e-9 Identity = 41/124 (33.06%), Postives = 64/124 (51.61%), Query Frame = 1
Query: 4 IFSLFSIYGLAVILPTNLQGGMGSSDSAKTTINTFNQLSMSNIRHYDGRMWVHAAGLWLLTFVAMYHLVVEYRFYTALRHKFLR----RKAAHMRTIVVEGVPKDMRSNFKLFTYFNTLYPGEV 363
+F++FSI+GLAV+LP N + K TI NIR + R+W H WL + + MY L E+ + LRH++ R + TI V G+PK++ ++ L F+ ++PG V
Sbjct: 12 LFAIFSIFGLAVLLPINSVNQGDNLGLEKFTI--------GNIRD-NKRLWSHVIFTWLFSGITMYALYREFNTFIRLRHEYHTTDEYRNSXRATTIXVTGIPKELNNSESLKALFD-IFPGGV 125
BLAST of mRNA_S-ischiensis_contig106.1888.1 vs. uniprot
Match: A0A7S1XLF6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLF6_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 2.910e-9 Identity = 39/126 (30.95%), Postives = 68/126 (53.97%), Query Frame = 1
Query: 1 QIFSLFSIYGLAVILPTNLQGGMGSSDSAKTTINTFNQLSMSNIRHYDGRMWVHAAGLWLLTFVAMYHLVVEYRFYTALRHKFL----RRKAAHMR-TIVVEGVPKDMRSNFKLFTYFNTLYPGEV 363
+IF + +GL+ ++P QG G++D TF +M+NI +WV +L A + + EY+ + LR++F R A R +I+VEGVP+ +R++ L+ YF+ ++PG+V
Sbjct: 134 RIFLFAAFWGLSCLVPFYEQGEQGTAD-------TFYHTTMANIEQGSDNIWVTTFFAYLFCAHAFFLIDAEYKAFMGLRNQFFLHGTRETVAQARYSILVEGVPRHLRTSSALYKYFDEIFPGKV 252 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig106.1888.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig106.1888.1 >prot_S-ischiensis_contig106.1888.1 ID=prot_S-ischiensis_contig106.1888.1|Name=mRNA_S-ischiensis_contig106.1888.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=121bp QIFSLFSIYGLAVILPTNLQGGMGSSDSAKTTINTFNQLSMSNIRHYDGRback to top mRNA from alignment at S-ischiensis_contig106:244323..244685+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig106.1888.1 ID=mRNA_S-ischiensis_contig106.1888.1|Name=mRNA_S-ischiensis_contig106.1888.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=363bp|location=Sequence derived from alignment at S-ischiensis_contig106:244323..244685+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig106:244323..244685+ >mRNA_S-ischiensis_contig106.1888.1 ID=mRNA_S-ischiensis_contig106.1888.1|Name=mRNA_S-ischiensis_contig106.1888.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=726bp|location=Sequence derived from alignment at S-ischiensis_contig106:244323..244685+ (Schizocladia ischiensis KU_0333)back to top |