mRNA_S-ischiensis_contig106.1855.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig106.1855.1 vs. uniprot
Match: Q45W64_PHACR (Polyprotein n=1 Tax=Phanerochaete chrysosporium (strain RP-78 / ATCC MYA-4764 / FGSC 9002) TaxID=273507 RepID=Q45W64_PHACR) HSP 1 Score: 100 bits (248), Expect = 1.630e-20 Identity = 63/169 (37.28%), Postives = 91/169 (53.85%), Query Frame = 3
Query: 216 GPHGPIHLGHSLRKIPFMDDMSRMQFPYFIKSKSEATEALQSLIDEQAIPN--GLHIGRIRMDGTRELTMGRFRDLCTTLGILLEHSAPYSQAQNGVAES--------ARAMLVASKLSTKLWTEAYRHASYLTNRTPSRATMNHSPYFLRYGKEPDLSNLRDWGSVAF 692
GP L ++ I F D SR F+K++ A + Q + EQ I G + + +D +E T G+FR + GI++ +APYS AQNGVAE ARAML+A L LW EA+ +A YL NRTP+RA +PY +G++PD+ RD+G+ +
Sbjct: 489 GPARVASLQGNVYAITFTDAKSRFVAVDFMKTRDAALDRFQKV--EQLIERQLGRRVKVLHVDNAKEYTEGKFRAYAESRGIIIRTTAPYSPAQNGVAERLNRTLMERARAMLIARSLPKFLWQEAWAYACYLRNRTPTRALSGKTPYEALWGQKPDVRAARDFGTPCW 655
BLAST of mRNA_S-ischiensis_contig106.1855.1 vs. uniprot
Match: A0A2D4PUY1_MICSU (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Micrurus surinamensis TaxID=129470 RepID=A0A2D4PUY1_MICSU) HSP 1 Score: 94.0 bits (232), Expect = 3.820e-19 Identity = 59/166 (35.54%), Postives = 91/166 (54.82%), Query Frame = 3
Query: 216 GPHGPIHLGHSLRKIPFMDDMSRMQFPYFIKSKSEATEALQSLIDEQAIPNGLHIGRIRMDGTRELTMGRFRDLCTTLGILLEHSAPYSQAQNGVAE--------SARAMLVASKLSTKLWTEAYRHASYLTNRTPSRATMNHSPYFLRYGKEPDLSNLRDWGSVA 689
GP P G S + +D+ SR + Y +K KSE + + +G++I RI+ D E +F+D GI + SAPY+ AQNGVAE + R +L +KL K W EA +A+++ NRT S + ++ +PYF+ YG +PD+S+L+ +GS A
Sbjct: 76 GPFAPS-FGGSRYFLTIVDNHSRFGYVYLLKEKSETFQIFKDFASLVFNQHGVNIARIQSDRGGEFMSQQFQDWMRKKGIKHQTSAPYTPAQNGVAERRNGVLQSTMRCLLDDAKLDMKYWGEAIMYANHIVNRTWS-SVIDQTPYFMLYGHKPDISHLQTFGSYA 239
BLAST of mRNA_S-ischiensis_contig106.1855.1 vs. uniprot
Match: A0A6H5I2X6_9HYME (Integrase catalytic domain-containing protein n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5I2X6_9HYME) HSP 1 Score: 93.6 bits (231), Expect = 2.720e-18 Identity = 59/179 (32.96%), Postives = 93/179 (51.96%), Query Frame = 3
Query: 183 LAP-RTRARRLDGPHGPIHLGHSLRKIPFMDDMSRMQFPYFIKSKSEATEALQSLIDEQAIPNGLHIGRIRMDGTRELTMGRFRDLCTTLGILLEHSAPYSQAQNG--------VAESARAMLVASKLSTKLWTEAYRHASYLTNRTPSRATMNHSPYFLRYGKEPDLSNLRDWGSVAF 692
LAP T L GP +G + + F DD S + +F+K KS+ +AL+S I G ++ +R D E ++ +G L SAPY+ QNG + ESAR ML++ +L T+LW EA A Y+ NRT + + +P+ + +G++PD+S++R +GS F
Sbjct: 445 LAPGETLHTDLCGPMQTTSVGGARFFLLFKDDASNFRKVFFLKHKSDCFDALKSYILSVNTQFGKNVKVLRSDNGTEYLNNNVKEFLKNVGTRLVTSAPYTPQQNGRAEREMRSIVESARTMLLSKRLPTRLWAEAVNTAVYILNRTLNSSNSKQTPFEIWFGRKPDISHVRIFGSECF 623
BLAST of mRNA_S-ischiensis_contig106.1855.1 vs. uniprot
Match: A0A6H5KU88_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU88_9PHAE) HSP 1 Score: 92.8 bits (229), Expect = 5.410e-18 Identity = 62/167 (37.13%), Postives = 88/167 (52.69%), Query Frame = 3
Query: 222 HGPIHLGHSLRKIPFMDDMSRMQFPYFIKSKSEATEALQSLIDEQAIPNGLHIGRIRMDGTRELTMGRFRDLCTTLGILLEHSAPYSQAQNGVAE---------SARAMLVASKLSTKLWTEAYRHASYLTNRTPSRATMNHSPYFLRYGKE-PDLSNLRDWGSVAF 692
H LG + F D +RM+F + IKSK A EAL++++ E+A P GL I + DG E GRF L +LGI +E +APY N VAE + R +L A L LW EA+++A Y+ NRTP+ +P + K L ++R++GSV F
Sbjct: 682 HSVKSLGGHKGAVMFTCDNTRMRFGFPIKSKDAAAEALETVVKEEADPEGLCITTLHCDGGGEFK-GRFAALAASLGIKIETNAPYMPQGNAVAERGFGTVAAITRRLLLGAPHLPESLWAEAFQYAIYILNRTPTDVLGGKAPLEVWENKPLGSLHHIREFGSVCF 847
BLAST of mRNA_S-ischiensis_contig106.1855.1 vs. uniprot
Match: A0A6H5JNR9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNR9_9PHAE) HSP 1 Score: 92.8 bits (229), Expect = 5.520e-18 Identity = 62/167 (37.13%), Postives = 88/167 (52.69%), Query Frame = 3
Query: 222 HGPIHLGHSLRKIPFMDDMSRMQFPYFIKSKSEATEALQSLIDEQAIPNGLHIGRIRMDGTRELTMGRFRDLCTTLGILLEHSAPYSQAQNGVAE---------SARAMLVASKLSTKLWTEAYRHASYLTNRTPSRATMNHSPYFLRYGKE-PDLSNLRDWGSVAF 692
H LG + F D +RM+F + IKSK A EAL++++ E+A P GL I + DG E GRF L +LGI +E +APY N VAE + R +L A L LW EA+++A Y+ NRTP+ +P + K L ++R++GSV F
Sbjct: 636 HSVKSLGGHKGAVMFTCDNTRMRFGFPIKSKDAAAEALETVVKEEADPEGLCITTLHCDGGGEFK-GRFAALAASLGIKIETNAPYMPQGNAVAERGFGTVAAITRRLLLGAPHLPESLWAEAFQYAIYILNRTPTDVLGGKAPLEVWENKPLGSLHHIREFGSVCF 801
BLAST of mRNA_S-ischiensis_contig106.1855.1 vs. uniprot
Match: A0A6H5KGY1_9PHAE (Integrase catalytic domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGY1_9PHAE) HSP 1 Score: 92.8 bits (229), Expect = 5.590e-18 Identity = 62/167 (37.13%), Postives = 88/167 (52.69%), Query Frame = 3
Query: 222 HGPIHLGHSLRKIPFMDDMSRMQFPYFIKSKSEATEALQSLIDEQAIPNGLHIGRIRMDGTRELTMGRFRDLCTTLGILLEHSAPYSQAQNGVAE---------SARAMLVASKLSTKLWTEAYRHASYLTNRTPSRATMNHSPYFLRYGKE-PDLSNLRDWGSVAF 692
H LG + F D +RM+F + IKSK A EAL++++ E+A P GL I + DG E GRF L +LGI +E +APY N VAE + R +L A L LW EA+++A Y+ NRTP+ +P + K L ++R++GSV F
Sbjct: 873 HSVKSLGGHKGAVMFTCDNTRMRFGFPIKSKDAAAEALETVVKEEADPEGLCITTLHCDGGGEFK-GRFAALAASLGIKIETNAPYMPQGNAVAERGFGTVAAITRRLLLGAPHLPESLWAEAFQYAIYILNRTPTDVLGGKAPLEVWENKPLGSLHHIREFGSVCF 1038
BLAST of mRNA_S-ischiensis_contig106.1855.1 vs. uniprot
Match: A0A6H5KBY7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBY7_9PHAE) HSP 1 Score: 92.8 bits (229), Expect = 5.610e-18 Identity = 62/167 (37.13%), Postives = 88/167 (52.69%), Query Frame = 3
Query: 222 HGPIHLGHSLRKIPFMDDMSRMQFPYFIKSKSEATEALQSLIDEQAIPNGLHIGRIRMDGTRELTMGRFRDLCTTLGILLEHSAPYSQAQNGVAE---------SARAMLVASKLSTKLWTEAYRHASYLTNRTPSRATMNHSPYFLRYGKE-PDLSNLRDWGSVAF 692
H LG + F D +RM+F + IKSK A EAL++++ E+A P GL I + DG E GRF L +LGI +E +APY N VAE + R +L A L LW EA+++A Y+ NRTP+ +P + K L ++R++GSV F
Sbjct: 944 HSVKSLGGHKGAVMFTCDNTRMRFGFPIKSKDAAAEALETVVKEEADPEGLCITTLHCDGGGEFK-GRFAALAASLGIKIETNAPYMPQGNAVAERGFGTVAAITRRLLLGAPHLPESLWAEAFQYAIYILNRTPTDVLGGKAPLEVWENKPLGSLHHIREFGSVCF 1109
BLAST of mRNA_S-ischiensis_contig106.1855.1 vs. uniprot
Match: A0A6H5JSH8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSH8_9PHAE) HSP 1 Score: 92.8 bits (229), Expect = 5.610e-18 Identity = 62/167 (37.13%), Postives = 88/167 (52.69%), Query Frame = 3
Query: 222 HGPIHLGHSLRKIPFMDDMSRMQFPYFIKSKSEATEALQSLIDEQAIPNGLHIGRIRMDGTRELTMGRFRDLCTTLGILLEHSAPYSQAQNGVAE---------SARAMLVASKLSTKLWTEAYRHASYLTNRTPSRATMNHSPYFLRYGKE-PDLSNLRDWGSVAF 692
H LG + F D +RM+F + IKSK A EAL++++ E+A P GL I + DG E GRF L +LGI +E +APY N VAE + R +L A L LW EA+++A Y+ NRTP+ +P + K L ++R++GSV F
Sbjct: 751 HSVKSLGGHKGAVMFTCDNTRMRFGFPIKSKDAAAEALETVVKEEADPEGLCITTLHCDGGGEFK-GRFAALAASLGIKIETNAPYMPQGNAVAERGFGTVAAITRRLLLGAPHLPESLWAEAFQYAIYILNRTPTDVLGGKAPLEVWENKPLGSLHHIREFGSVCF 916
BLAST of mRNA_S-ischiensis_contig106.1855.1 vs. uniprot
Match: A0A6H5K2K1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2K1_9PHAE) HSP 1 Score: 92.8 bits (229), Expect = 5.720e-18 Identity = 62/167 (37.13%), Postives = 88/167 (52.69%), Query Frame = 3
Query: 222 HGPIHLGHSLRKIPFMDDMSRMQFPYFIKSKSEATEALQSLIDEQAIPNGLHIGRIRMDGTRELTMGRFRDLCTTLGILLEHSAPYSQAQNGVAE---------SARAMLVASKLSTKLWTEAYRHASYLTNRTPSRATMNHSPYFLRYGKE-PDLSNLRDWGSVAF 692
H LG + F D +RM+F + IKSK A EAL++++ E+A P GL I + DG E GRF L +LGI +E +APY N VAE + R +L A L LW EA+++A Y+ NRTP+ +P + K L ++R++GSV F
Sbjct: 1414 HSVKSLGGHKGAVMFTCDNTRMRFGFPIKSKDAAAEALETVVKEEADPEGLCITTLHCDGGGEFK-GRFAALAASLGIKIETNAPYMPQGNAVAERGFGTVAAITRRLLLGAPHLPESLWAEAFQYAIYILNRTPTDVLGGKAPLEVWENKPLGSLHHIREFGSVCF 1579
BLAST of mRNA_S-ischiensis_contig106.1855.1 vs. uniprot
Match: A0A6H5KP38_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP38_9PHAE) HSP 1 Score: 92.8 bits (229), Expect = 5.830e-18 Identity = 62/167 (37.13%), Postives = 88/167 (52.69%), Query Frame = 3
Query: 222 HGPIHLGHSLRKIPFMDDMSRMQFPYFIKSKSEATEALQSLIDEQAIPNGLHIGRIRMDGTRELTMGRFRDLCTTLGILLEHSAPYSQAQNGVAE---------SARAMLVASKLSTKLWTEAYRHASYLTNRTPSRATMNHSPYFLRYGKE-PDLSNLRDWGSVAF 692
H LG + F D +RM+F + IKSK A EAL++++ E+A P GL I + DG E GRF L +LGI +E +APY N VAE + R +L A L LW EA+++A Y+ NRTP+ +P + K L ++R++GSV F
Sbjct: 2191 HSVKSLGGHKGAVMFTCDNTRMRFGFPIKSKDAAAEALETVVKEEADPEGLCITTLHCDGGGEFK-GRFAALAASLGIKIETNAPYMPQGNAVAERGFGTVAAITRRLLLGAPHLPESLWAEAFQYAIYILNRTPTDVLGGKAPLEVWENKPLGSLHHIREFGSVCF 2356 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig106.1855.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig106.1855.1 >prot_S-ischiensis_contig106.1855.1 ID=prot_S-ischiensis_contig106.1855.1|Name=mRNA_S-ischiensis_contig106.1855.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=142bp MDDMSRMQFPYFIKSKSEATEALQSLIDEQAIPNGLHIGRIRMDGTRELTback to top mRNA from alignment at S-ischiensis_contig106:21951..22666+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig106.1855.1 ID=mRNA_S-ischiensis_contig106.1855.1|Name=mRNA_S-ischiensis_contig106.1855.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=716bp|location=Sequence derived from alignment at S-ischiensis_contig106:21951..22666+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig106:21951..22666+ >mRNA_S-ischiensis_contig106.1855.1 ID=mRNA_S-ischiensis_contig106.1855.1|Name=mRNA_S-ischiensis_contig106.1855.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=852bp|location=Sequence derived from alignment at S-ischiensis_contig106:21951..22666+ (Schizocladia ischiensis KU_0333)back to top |