mRNA_S-ischiensis_contig105.1842.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig105.1842.1 vs. uniprot
Match: A0A835Z7S8_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7S8_9STRA) HSP 1 Score: 221 bits (563), Expect = 3.210e-67 Identity = 119/204 (58.33%), Postives = 149/204 (73.04%), Query Frame = 2
Query: 20 AMPAP-LPRSHVGHKF-HGYAAPKVVIELFLDLACPFSEKMYNTALAQVAPERERANPGQVEWVVHQVVQPWHPSSALMHEAALAVKEVNPEAFWDFFKAAYDQREDKFIDDVTYDKSRADMYEILSDIAASVGVDRAAVRQKLDLKATGNMGTWMTQELKFTIKFHRKRGVHVTPTVFVNGMEAGQVSSGWTVQEWNEFLDAL 625
+M AP LP + +G+ H A+PKV ++ F DLACPF+ +MY T L +V P E V W ++ V QPWHP S LMHEAALAV V PEAF+DF A + QRE+KFIDDVT DK+R +Y++L++IAA VGV++ AVRQKL+LKA GNMGT MTQ +KF ++HRKRGVHVTPTVF+NG+E G +SS TV EW E LDAL
Sbjct: 46 SMMAPNLPPAPLGYTMPHSSASPKVQVDFFFDLACPFAGRMYLT-LQKVLPLYEGKG---VLWKMYHVPQPWHPQSTLMHEAALAVNTVKPEAFFDFCHAVWTQREEKFIDDVTVDKTRNQIYDVLAEIAAEVGVEKEAVRQKLELKALGNMGTHMTQGIKFATQYHRKRGVHVTPTVFMNGIENGAISSSATVDEWKETLDAL 245
BLAST of mRNA_S-ischiensis_contig105.1842.1 vs. uniprot
Match: A0A7S4VHI0_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4VHI0_9DINO) HSP 1 Score: 190 bits (483), Expect = 8.900e-56 Identity = 103/203 (50.74%), Postives = 131/203 (64.53%), Query Frame = 2
Query: 23 MPAPLPRSHVGHKFHGYAAP-KVVIELFLDLACPFSEKMYNTALAQVAPERERANPGQVEWVVHQVVQPWHPSSALMHEAALAVKEVNPEAFWDFFKAAYDQREDKFIDDVTYDKSRADMYEILSDIAA-SVGVDRAAVRQKLDLKATGNMGTWMTQELKFTIKFHRKRGVHVTPTVFVNGMEAGQVSSGWTVQEWNEFLDAL 625
M PLP +GH + P ++V+ELFLDL CPF +KM TAL VAP E ++PGQV+W+ V+QPWHP S +MHEA LAV PEA W + A D++E F DD DKSR +YE L+ +A SVG+ +A V L L+ GN G+ TQ +K+ K HR RGVHVTPTVFVNG EA QV SGW+ +EW FL+ +
Sbjct: 1 MGPPLPPGPLGHPYKAAEKPPRIVVELFLDLCCPFCKKMM-TALKDVAPAVEASHPGQVQWLFCNVIQPWHPQSCMMHEAFLAVSTKKPEAAWPYAWAVLDKQE-SFFDDQVMDKSRKQLYEELASVAEESVGLPKAEVLDVLALQGAGNAGSQATQLVKWYTKMHRVRGVHVTPTVFVNGTEAPQVGSGWSAEEWKAFLEPM 201
BLAST of mRNA_S-ischiensis_contig105.1842.1 vs. uniprot
Match: A0A7S1WTV5_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1WTV5_ALECA) HSP 1 Score: 185 bits (469), Expect = 1.110e-53 Identity = 102/203 (50.25%), Postives = 129/203 (63.55%), Query Frame = 2
Query: 23 MPAPLPRSHVGHKFHGYAAP-KVVIELFLDLACPFSEKMYNTALAQVAPERERANPGQVEWVVHQVVQPWHPSSALMHEAALAVKEVNPEAFWDFFKAAYDQREDKFIDDVTYDKSRADMYEILSDIAAS-VGVDRAAVRQKLDLKATGNMGTWMTQELKFTIKFHRKRGVHVTPTVFVNGMEAGQVSSGWTVQEWNEFLDAL 625
M PLP +GH F P K+V+ELFLDL CPFS+KM T L +V E + PGQV+W+ V+QPWHP S +MHE LAV EA W F A +D++E F DD DKSR +YE ++ IA S VGV +A V L L+ GN G+ +TQ +K+ K HR RGVHVTPTVFVNG EA QV SGW+ +EW F++ +
Sbjct: 1 MGPPLPPGPLGHPFKAAERPPKIVVELFLDLCCPFSKKMMMT-LKEVTAAVEASCPGQVQWLFCNVIQPWHPQSCMMHEVCLAVSAKKAEATWPFIWALFDKQE-SFFDDQVMDKSRKQLYEEMAAIAESAVGVPKADVLGALALQGAGNSGSQVTQLVKWYTKMHRVRGVHVTPTVFVNGTEAPQVGSGWSAEEWKAFVEPM 201
BLAST of mRNA_S-ischiensis_contig105.1842.1 vs. uniprot
Match: A0A813KXB5_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KXB5_POLGL) HSP 1 Score: 172 bits (436), Expect = 7.590e-49 Identity = 94/196 (47.96%), Postives = 123/196 (62.76%), Query Frame = 2
Query: 35 LPRSHVGHKFHGYAAPKVVIELFLDLACPFSEKMYNTALAQVAPERERANPGQVEWVVHQVVQPWHPSSALMHEAALAVKE-VNPEAFWDFFKAAYDQREDKFIDDVTYDKSRADMYEILSDIAASVGVDRAAVRQKLDLKATGNMGTWMTQELKFTIKFHRKRGVHVTPTVFVNGMEAGQVSSGWTVQEWNEFLD 619
+P VG G V +ELFLDL CP+S KM+ T VAP+ E G+V++V H V QPWH S MHEA+LAV + P+ FWDF A + ++E+ F DD+ DK+R ++Y L+ +A VGV A V +L LK GN G+ +TQ K+ K HR RGVHVTPTV +NG+EAG V SGW+ +EW FLD
Sbjct: 1 MPSVPVGVARPGGQKASVTVELFLDLCCPYSNKMFKTISEHVAPKYE----GEVKFVFHSVAQPWHAQSCYMHEASLAVLDSAGPQKFWDFAGALFCKQEE-FFDDMVMDKTRNELYSELAKVAEEVGVAPAEVLNRLQLKP-GNAGSAVTQRFKWATKLHRSRGVHVTPTVHLNGLEAGVVGSGWSPEEWQSFLD 190
BLAST of mRNA_S-ischiensis_contig105.1842.1 vs. uniprot
Match: A0A7S4FB01_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FB01_CHRCT) HSP 1 Score: 173 bits (438), Expect = 1.130e-48 Identity = 99/217 (45.62%), Postives = 134/217 (61.75%), Query Frame = 2
Query: 2 LQLGTRAMPAPLPRSHVGHKFHGYAAPKVVIELFLDLACPFSEKMYNT------ALAQVAPERERANPGQVEWVVHQVVQPWHPSSALMHEAALAVKEVNPEAFWDFFKAAYDQREDKFIDDVTYDKSRADMYEILSDIAASVGVDRAAVRQKLD-LKATGNMGTWMTQELKFTIKFHRKRGVHVTPTVFVNGMEAGQVSSGWTVQEWNEFLDALPK 631
L + A P PLP++ VG + AP + + L+ DL CPFS +M+ A+AQ+ E+ + G+V+W H V QPWH SA MHEA+LAV+ PE W F A Q++D F D+ D SR D+Y+ L+ IA++VG + A+ Q L L+ TGN G +TQ LK+ ++ HR GVHVTPTVFVNG+EA QVSSGW+ EW +F D L K
Sbjct: 25 LAIAASAAP-PLPKAPVGFRLFPGRAPALDVHLYHDLCCPFSRQMFEALCGDSGAIAQL----EKQSEGRVQWTYHCVPQPWHAQSACMHEASLAVEAAAPEKTWSFLAALNAQQQD-FFDEHAMDYSRRDLYKRLASIASTVGCEEEAILQLLSPLEPTGNSGIGVTQALKWHVRHHRAAGVHVTPTVFVNGIEAPQVSSGWSSTEWVDFCDGLLK 235
BLAST of mRNA_S-ischiensis_contig105.1842.1 vs. uniprot
Match: A0A813G1E7_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813G1E7_POLGL) HSP 1 Score: 167 bits (422), Expect = 6.540e-46 Identity = 95/216 (43.98%), Postives = 125/216 (57.87%), Query Frame = 2
Query: 32 PLPRSHVGHKFHGYAAPKVVIELFLDLACPFSEKMYNTALAQVAPERE-------------------RANPGQVEWVVHQVVQPWHPSSALMHEAALAVKE-VNPEAFWDFFKAAYDQREDKFIDDVTYDKSRADMYEILSDIAASVGVDRAAVRQKLDLKATGNMGTWMTQELKFTIKFHRKRGVHVTPTVFVNGMEAGQVSSGWTVQEWNEFLD 619
P+P VG G V +ELFLDL CP+S KM+ T VAP+ E + + QV++V H V QPWH S MHEA+LAV + P+ FWDF A + ++E+ F DD+ DK+R ++Y L+ +A VGV A V +L LK GN G+ +TQ K+ K HR RGVHVTPTV +NG+EAG V SGW+ +EW FLD
Sbjct: 44 PMPSVPVGVARPGGQKASVTVELFLDLCCPYSNKMFKTISEHVAPKYEGEAGLMNICSLTQATLDMNKESLSQVKFVFHSVAQPWHAQSCYMHEASLAVLDSAGPQKFWDFAGALFCKQEE-FFDDMVMDKTRNELYSELAKVAEEVGVAPAEVLNRLQLKP-GNAGSAVTQRFKWATKLHRSRGVHVTPTVHLNGLEAGVVGSGWSPEEWQSFLD 257
BLAST of mRNA_S-ischiensis_contig105.1842.1 vs. uniprot
Match: R1CC22_EMIHU (Thioredoxin-like_fold domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CC22_EMIHU) HSP 1 Score: 164 bits (414), Expect = 1.310e-44 Identity = 100/211 (47.39%), Postives = 133/211 (63.03%), Query Frame = 2
Query: 8 LGTRAMPAPLPRSHVGHKFHGYAAPKVV-IELFLDLACPFSEKMYNTALAQVAPER--ERANPGQVEWVVHQVVQPWHPSSALMHEAALAVKEVNPEAFWDFFKAAYDQRED-KFIDDVTYDKSRADMYEILSDIAASVGVDRAAVRQKLDLKATG---NMGTWMTQELKFTIKFHRKRGVHVTPTVFVNGMEAGQVSSGWTVQEWNEFLD 619
L R M PL + +G+ + AA V +E+FLDL CPFS KM+ T ER +RA +V+HQV QPWH + +HEAALAVKEV P+ + ++ A Y+ + KF D T++KSR + L D+AASVGVDRAA KL ++A+ N+G +TQ +K+ K HR RGVHVTPTV VNG+EAG VSSGWT ++W FL+
Sbjct: 59 LALRLMGPPLSPTAIGYVLNSAAAASPVRVEMFLDLICPFSRKMFVTLTEGRVIERAGDRAC-----FVLHQVPQPWHAQGSYVHEAALAVKEVAPDLYPNYIGAIYECFDKGKFTDRDTWEKSRTQINAELCDLAASVGVDRAATAAKLAMRASADGNNVGNEVTQAVKWICKHHRTRGVHVTPTVHVNGLEAGIVSSGWTPEQWLAFLE 264
BLAST of mRNA_S-ischiensis_contig105.1842.1 vs. uniprot
Match: R1FWQ6_EMIHU (SAP domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FWQ6_EMIHU) HSP 1 Score: 164 bits (414), Expect = 2.070e-44 Identity = 100/211 (47.39%), Postives = 133/211 (63.03%), Query Frame = 2
Query: 8 LGTRAMPAPLPRSHVGHKFHGYAAPKVV-IELFLDLACPFSEKMYNTALAQVAPER--ERANPGQVEWVVHQVVQPWHPSSALMHEAALAVKEVNPEAFWDFFKAAYDQRED-KFIDDVTYDKSRADMYEILSDIAASVGVDRAAVRQKLDLKATG---NMGTWMTQELKFTIKFHRKRGVHVTPTVFVNGMEAGQVSSGWTVQEWNEFLD 619
L R M PL + +G+ + AA V +E+FLDL CPFS KM+ T ER +RA +V+HQV QPWH + +HEAALAVKEV P+ + ++ A Y+ + KF D T++KSR + L D+AASVGVDRAA KL ++A+ N+G +TQ +K+ K HR RGVHVTPTV VNG+EAG VSSGWT ++W FL+
Sbjct: 76 LALRLMGPPLSPTAIGYVLNSAAAASPVRVEMFLDLICPFSRKMFVTLTEGRVIERAGDRAC-----FVLHQVPQPWHAQGSYVHEAALAVKEVAPDLYPNYIGAIYECFDKGKFTDRDTWEKSRTQINAELCDLAASVGVDRAATAAKLAMRASADGNNVGNEVTQAVKWICKHHRTRGVHVTPTVHVNGLEAGIVSSGWTPEQWLAFLE 281
BLAST of mRNA_S-ischiensis_contig105.1842.1 vs. uniprot
Match: A0A7S1FB44_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1FB44_NOCSC) HSP 1 Score: 160 bits (404), Expect = 4.670e-44 Identity = 92/202 (45.54%), Postives = 125/202 (61.88%), Query Frame = 2
Query: 32 PLPRSHVGHKFHGYAAPKVVIELFLDLACPFSEKMYNTALAQVAP-ERERANPGQVEWVVHQVVQPWHPSSALMHEAALAVKEVNPEAFWDFFKAAYDQREDKFIDDVTYDKSRADMYEILSDIAASVGVDRAAVRQKLDLKA---TGNMGTWMTQELKFTIKFHRKRGVHVTPTVFVNGMEAGQVSSGWTVQEWNEFLDAL 625
P+P +GH+ G ++ IE FLD CPF K +N + +V P ++R + + + V QPWH S+ MHEAALAV+EV+ + + F A + +E +F DD +DKSRA +Y+ L +AASVGVD AV KL K + N G +TQ LKF KFHR RG+HVTPTV VNG+ +SSGWTV++W +LDAL
Sbjct: 2 PVPSRPLGHRL-GDVTAQIEIEAFLDFCCPFCRKHWNCFVLEVLPLYKDRG----LNYRHYNVAQPWHAQSSYMHEAALAVEEVDADKYTAFATALFAAQE-QFFDDAVWDKSRATIYQELCTLAASVGVDAEAVAAKLARKVVEGSHNTGNDVTQALKFYTKFHRTRGMHVTPTVMVNGVVEDSISSGWTVEQWTGYLDAL 197
BLAST of mRNA_S-ischiensis_contig105.1842.1 vs. uniprot
Match: A0A7S2V1J5_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1J5_9STRA) HSP 1 Score: 155 bits (392), Expect = 2.360e-42 Identity = 82/199 (41.21%), Postives = 117/199 (58.79%), Query Frame = 2
Query: 23 MPAPLPRSHVGHKFHGYAAPKVVIELFLDLACPFSEKMYNTALAQVAPERERANPGQVEWVVHQVVQPWHPSSALMHEAALAVKEVNPEAFWDFFKAAYDQREDKFIDDVTYDKSRADMYEILSDIAASVGVDRAAVRQKLDLKATGNMGTWMTQELKFTIKFHRKRGVHVTPTVFVNGMEAGQVSSGWTVQEWNEFLD 619
MP P P++ G A+PK VIE FLD CPFS KMYN A+V P + A+PG++++V+HQV QPWHP S LMH A AV+EV P A + + F D+ DK+R ++++ L+ +A + G + V L++ G Q +KF K+HR RGVHVTPTV +NG+ A + S ++V +W E +D
Sbjct: 1 MPPPFPKTPTGISLSKCASPKTVIEAFLDFQCPFSVKMYNKLTAEVVPHYQSAHPGEIDFVIHQVPQPWHPQSCLMHMALWAVREVGPPEAVAPMMNALCELQPSFSDEYCMDKTRRELFQQLAGLAGAAGSSQEGV---LNMLLEGKSA----QGIKFLCKYHRTRGVHVTPTVMLNGLVANHIESSFSVDQWKEAVD 192 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig105.1842.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig105.1842.1 >prot_S-ischiensis_contig105.1842.1 ID=prot_S-ischiensis_contig105.1842.1|Name=mRNA_S-ischiensis_contig105.1842.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=204bp MPAPLPRSHVGHKFHGYAAPKVVIELFLDLACPFSEKMYNTALAQVAPERback to top mRNA from alignment at S-ischiensis_contig105:170725..173621- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig105.1842.1 ID=mRNA_S-ischiensis_contig105.1842.1|Name=mRNA_S-ischiensis_contig105.1842.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2897bp|location=Sequence derived from alignment at S-ischiensis_contig105:170725..173621- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig105:170725..173621- >mRNA_S-ischiensis_contig105.1842.1 ID=mRNA_S-ischiensis_contig105.1842.1|Name=mRNA_S-ischiensis_contig105.1842.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1224bp|location=Sequence derived from alignment at S-ischiensis_contig105:170725..173621- (Schizocladia ischiensis KU_0333)back to top |