mRNA_S-ischiensis_contig104.1801.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig104.1801.1
Unique NamemRNA_S-ischiensis_contig104.1801.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig104.1801.1 vs. uniprot
Match: A0A835ZH03_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH03_9STRA)

HSP 1 Score: 197 bits (500), Expect = 8.130e-60
Identity = 97/193 (50.26%), Postives = 134/193 (69.43%), Query Frame = 1
Query:   16 VFVGGLQRSATTFVSGVLERVPCISGMTAPG-DAETMEAMEPWKLHNFTEKYFLSVVDTGGLEGKFVQTVYPYYNFHKFANLHGIQVTKIKSAVLAAEAAGNAREKLMEQWGVFWDTSKPTLLEKTPENIIYPTFLQDTFGREST-FIFSMRHPLCWAMAIHKWMKTDN-YMTKLRDVVALWLTAHQLMLHDL 585
            VFVGGLQRSATT ++ +++R+PC+S ++     AE +   EPWKL+ FTE YFL+V  TGGLEGKFVQT YPY+N  +  N  GI+V  I+  V +++ +   R +L +QW  +W+ + P LLEKTPENI++ ++LQ  FG   T FIF +RHPL WA+A+ KW+   + Y+   RD+VA WLT HQ ML+DL
Sbjct:   15 VFVGGLQRSATTLLADLIQRLPCVSSLSLDNVSAEELARREPWKLNGFTEDYFLNVHRTGGLEGKFVQTAYPYHNLIRETNQEGIRVEAIRRKV-SSQLSAQTRAQLRQQWTPYWNLTHPVLLEKTPENILWSSYLQGAFGSTDTSFIFVLRHPLTWALAVRKWVSDRHRYLLSTRDLVAFWLTVHQHMLNDL 206          
BLAST of mRNA_S-ischiensis_contig104.1801.1 vs. uniprot
Match: A0A7S2WKR9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WKR9_9STRA)

HSP 1 Score: 131 bits (330), Expect = 1.550e-33
Identity = 83/206 (40.29%), Postives = 119/206 (57.77%), Query Frame = 1
Query:    1 GGRAHVFVGGLQRSATTFVSGVLERVP--CISGMTAPGDAETMEAMEPWKLHNFTEKYFLSVVDTGGLEGKFVQTVYPY-YNFHKFANLHGIQVTKIKSAVLAAEAAGNARE---KLMEQWGVFWDTSKPTLLEKTPENIIYPTFLQDTFGREST-FIFSMRHPLCWAMAIHKWMKTDN---YMTKLRDVVALWLTAHQLMLHDLP 588
            GG+ ++FVGGLQR+ TT+++  + R     +  +   G+   +E   PW +  F  +YF SVV TGGLEGKFVQTVYP+ Y    F    G +   + S    A A+  +RE   KL+E+WG++W TS    LEKTPENI+    LQ   G E T F+F+ RHPL W++A+ K+++      Y  + R  +AL +  H  + HDLP
Sbjct:    8 GGQQYIFVGGLQRTGTTYLAETIGRTAGAALQSLEWMGEQNYLE-YSPWSIQGFDRRYFESVVRTGGLEGKFVQTVYPFPYVLRDF----GERKQPVHSLFQNATASFVSRENGLKLIEEWGLWWPTSAHLRLEKTPENILMSPALQALLGAERTSFVFTFRHPLAWSLAVSKFVRPSMAQLYFVENRLRLALSVMRH-FVDHDLP 207          
BLAST of mRNA_S-ischiensis_contig104.1801.1 vs. uniprot
Match: A0A7S4C5P6_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C5P6_CHRCT)

HSP 1 Score: 114 bits (286), Expect = 4.240e-27
Identity = 73/177 (41.24%), Postives = 101/177 (57.06%), Query Frame = 1
Query:    7 RAHVFVGGLQRSATTFVSGVLERVPCISGM--TAPGDAETMEAMEPWK----LHN---FTEKYFLSVVDTGGLEGKFVQTVYPY-YNFH--KFANLHGIQVTKIKSAVLAAEAAGNAREKLMEQWGVFWDTSKPTLLEKTPENIIYPTFLQDTFGRESTFIFSMRHPLCWAMAIHKW 501
            R  +FVGGLQRS T+ ++G+L R+P  +G+   A   A+  EA  PWK    +H        YF  VV TGG EGK +Q+V+PY Y  H  KFA L  +       + L A AA   R  L  QW  FW  + P  ++K+PEN++   FLQ +FG  ++F+F +RHPL W++A  KW
Sbjct:  176 RRALFVGGLQRSGTSMLAGLLTRLPGAAGLHFNASSLADMEEA--PWKSLSDVHTGGWMKWAYFREVVATGGAEGKLLQSVFPYRYTLHDAKFAGLRALLSAPSSLSPLRARAA---RRALWSQWRRFWRPA-PLFVDKSPENMLMAPFLQASFGASASFLFVLRHPLSWSLAAAKW 346          
BLAST of mRNA_S-ischiensis_contig104.1801.1 vs. uniprot
Match: A0A7S2NFR8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2NFR8_9EUKA)

HSP 1 Score: 104 bits (259), Expect = 9.580e-25
Identity = 55/136 (40.44%), Postives = 85/136 (62.50%), Query Frame = 1
Query:   16 VFVGGLQRSATTFVSGVLERVPCISGMTAPG-DAETMEAMEPWKLHNFTEKYFLSVVDTGGLEGKFVQTVYPYYNFHKFANLHGIQVTKIKSAVLAAEAAGNAREKLMEQWGVFWDTSKPTLLEKTPENIIYPTFL 420
            +F+GGLQRS TT++ G++   P +SG++    D    +  +PW L N T+ YF  VV +GG+EGKFVQ+VYPY N  +    +   +  +   V ++ A+  A  +L ++W +FWDT+KP LLEKTPE+ +   +L
Sbjct:   45 LFMGGLQRSGTTWLEGLVTS-PSVSGLSFDNVDLGEYQRQQPWLLQNHTQAYFELVVRSGGVEGKFVQSVYPYVNLFRDVGKNSRPLNTL--IVNSSAASPQAGTQLFKEWALFWDTTKPFLLEKTPEHFLMGPYL 177          
BLAST of mRNA_S-ischiensis_contig104.1801.1 vs. uniprot
Match: A0A7S3JQB0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JQB0_9STRA)

HSP 1 Score: 107 bits (267), Expect = 5.290e-24
Identity = 72/203 (35.47%), Postives = 98/203 (48.28%), Query Frame = 1
Query:    7 RAHVFVGGLQRSATTFVSGVLERVPCISGMTAPGDAETMEAMEPWKLHNFTEKYFLSVVDTGGLEGKFVQTVYPY-YNFHKFANLHGIQVTKIK-SAVLAAEAAGNAREKLMEQWGVFWDTSKPTLLEKTPENIIYPTFLQDTFGR-----ESTFIFSMRHPLCWAMAIHKWMKTD---NYMTKLRDV---VALWLTAHQLML 576
            R  VFVGGLQRS TT  + +LE +              M      KL      Y    + +GGLEGKFVQ VYPY Y   ++ +     + K   S+ L     GN   +L +QW  FW+ S   L+EKTPENI+   FLQ  F       +  F+F +RHPL W++ I KW++     ++   LR +   V +WL     ML
Sbjct:   64 RTIVFVGGLQRSGTTTAATLLENIDESWSKQQVRQELGMIVNRIAKLRGMNPSYVKDTLSSGGLEGKFVQNVYPYHYLLKEWGSGGNTAIDKFSLSSELVQPDTGN---RLWQQWHSFWNESATVLIEKTPENILMSQFLQSAFQNITIPNKVAFVFVLRHPLAWSLVIDKWLRNKWNRDFTKSLRPLQARVQMWLDVTTTML 263          
BLAST of mRNA_S-ischiensis_contig104.1801.1 vs. uniprot
Match: A0A5B7SJP5_9FLAO (Sulfotransferase n=1 Tax=Aggregatimonas sangjinii TaxID=2583587 RepID=A0A5B7SJP5_9FLAO)

HSP 1 Score: 72.4 bits (176), Expect = 6.230e-12
Identity = 45/146 (30.82%), Postives = 80/146 (54.79%), Query Frame = 1
Query:  163 KYFLSVVDTGGLE--GKFVQTVYP----YYNFHKFANLHGIQVTKIKSAVLAAEAAGNAREKLMEQWGVFWDTSKPTLLEKTPENIIYPTFLQDTFGRESTFIFSMRHPLCWAMAIHKWMKTDNYMTKLRDVVALWLTAHQLMLHD 582
            ++F    DTG  E  G+ +Q+V+P    +    KFA     ++ +  + +      GN REK++++WG +WD  KP  +EK+P N+I   F Q+ F + + FI   RHP+  ++A  KW +T      + +++  W+TAH++  +D
Sbjct:   26 EHFSGFHDTGIFEDEGQHLQSVFPPDMDFGGPGKFAFDQNSRLDETSALI----TPGN-REKILKEWGKYWDKEKPFWIEKSPPNLIRMRFFQELFPK-AYFITISRHPIAVSLATKKWSRTS-----VPNLIKHWVTAHEIYRND 160          
BLAST of mRNA_S-ischiensis_contig104.1801.1 vs. uniprot
Match: A0A0M0JEP1_9EUKA (Nodulation protein noee n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JEP1_9EUKA)

HSP 1 Score: 68.6 bits (166), Expect = 3.860e-10
Identity = 35/101 (34.65%), Postives = 57/101 (56.44%), Query Frame = 1
Query:  298 AAEAAGNAREKLMEQWGVFWDTSKPTLLEKTPENIIYPTFLQDTFG----RESTFIFSMRHPLCWAMAIHKWMKTDNYMTKLRDVVALWLTAHQLMLHDLP 588
            A     N+R+ L+ QWG FW+TS+P LLEKTP +++    LQ        ++++F+F  RHPL  A+A  +W    +    +  +   WL +H+++  DLP
Sbjct:  104 ALNTRANSRQ-LLSQWGYFWNTSRPVLLEKTPTDMLTSRLLQALLSPPPRQQTSFVFLTRHPLAVALAHMRWPACRHQ--SVGSLALHWLVSHRVLASDLP 201          
BLAST of mRNA_S-ischiensis_contig104.1801.1 vs. uniprot
Match: A0A2T0QD75_9ACTN (Sulfotransferase family protein n=1 Tax=Allonocardiopsis opalescens TaxID=1144618 RepID=A0A2T0QD75_9ACTN)

HSP 1 Score: 64.7 bits (156), Expect = 4.320e-9
Identity = 53/195 (27.18%), Postives = 83/195 (42.56%), Query Frame = 1
Query:   16 VFVGGLQRSATTFVSGVLERVPCISGMTAPGDAETMEAMEPWKLHNFTEKYFLSVVDTGGLEGKFVQTVYP----YYNFHKFANLHGIQVTKIKSAVLAAEAAGNAREKLMEQWGVFWDTSKPTLLEKTPENIIYPTFLQDTFGRESTFIFSMRHPLCWAMAIHKWMKTDNYMTKLRDVVALWLTAHQLMLHDLP 588
            VFVGGL  S    +S  L   P +S +    DAE           + TE                 Q+VYP    Y    +F       +T+    V  + A     ++L+  WG +WD SK  L+E  P N++   FLQ  +  ++ F+  +RHP+    A+    +   +   ++ ++  WLTAH+L L D P
Sbjct:    9 VFVGGLHHSGACQLSDALAAHPDVSVLAGTPDAE-----------DSTEHR---------------QSVYPPDTVYGGAGRFCFDAEAHLTESSPLVRRSAA-----QRLLHDWGRYWDLSKRVLVETAPPNLVMTRFLQRLYP-DAVFVLMVRHPV----AVSVETRHSRWTASMQSLLEHWLTAHELFLSDAP 167          
BLAST of mRNA_S-ischiensis_contig104.1801.1 vs. uniprot
Match: A0A7S1SEA8_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1SEA8_ALECA)

HSP 1 Score: 58.5 bits (140), Expect = 1.010e-6
Identity = 30/93 (32.26%), Postives = 47/93 (50.54%), Query Frame = 1
Query:  319 AREKLMEQWGVFWDTSKPTLLEKTPENIIYPTFLQDTFG-----RESTFIFSMRHPLCWAMAIHKWMKTDNYMTKLRDVVALWLTAHQLMLHD 582
            ++++L  QW +FWD S+P L+EK+P N +   FL   +G       + FIF  RHP+  AMA  +          + D+V  W+ A +    D
Sbjct:  174 SQQRLFNQWALFWDLSRPVLMEKSPSNGVISPFLHRLWGLGLDSSPARFIFLQRHPIAVAMATQRAGGLAVNDLGIADLVENWVVAEERRTED 266          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig104.1801.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A835ZH03_9STRA8.130e-6050.26Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7S2WKR9_9STRA1.550e-3340.29Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S4C5P6_CHRCT4.240e-2741.24Hypothetical protein (Fragment) n=1 Tax=Chrysotila... [more]
A0A7S2NFR8_9EUKA9.580e-2540.44Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A7S3JQB0_9STRA5.290e-2435.47Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A5B7SJP5_9FLAO6.230e-1230.82Sulfotransferase n=1 Tax=Aggregatimonas sangjinii ... [more]
A0A0M0JEP1_9EUKA3.860e-1034.65Nodulation protein noee n=1 Tax=Chrysochromulina t... [more]
A0A2T0QD75_9ACTN4.320e-927.18Sulfotransferase family protein n=1 Tax=Allonocard... [more]
A0A7S1SEA8_ALECA1.010e-632.26Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig104contigS-ischiensis_contig104:130719..139584 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score84.3
Seed ortholog evalue6.7e-14
Seed eggNOG ortholog367299.JOEE01000007_gene189
EggNOG free text desc.Sulfotransferase family
EggNOG OGs2H5WR@201174,COG0457@1,COG0457@2
COG Functional cat.S
Best tax levelActinobacteria
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons5
Model size588
Cds size588
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig104.1801.1prot_S-ischiensis_contig104.1801.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig104 130719..139584 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815561.0440094-CDS-S-ischiensis_contig104:130718..1307971622815561.0440094-CDS-S-ischiensis_contig104:130718..130797Schizocladia ischiensis KU_0333CDSS-ischiensis_contig104 130719..130797 -
1695739770.6879106-CDS-S-ischiensis_contig104:130718..1307971695739770.6879106-CDS-S-ischiensis_contig104:130718..130797Schizocladia ischiensis KU_0333CDSS-ischiensis_contig104 130719..130797 -
1622815561.0606809-CDS-S-ischiensis_contig104:131505..1315811622815561.0606809-CDS-S-ischiensis_contig104:131505..131581Schizocladia ischiensis KU_0333CDSS-ischiensis_contig104 131506..131581 -
1695739770.6997013-CDS-S-ischiensis_contig104:131505..1315811695739770.6997013-CDS-S-ischiensis_contig104:131505..131581Schizocladia ischiensis KU_0333CDSS-ischiensis_contig104 131506..131581 -
1622815561.0760593-CDS-S-ischiensis_contig104:132951..1331141622815561.0760593-CDS-S-ischiensis_contig104:132951..133114Schizocladia ischiensis KU_0333CDSS-ischiensis_contig104 132952..133114 -
1695739770.7096164-CDS-S-ischiensis_contig104:132951..1331141695739770.7096164-CDS-S-ischiensis_contig104:132951..133114Schizocladia ischiensis KU_0333CDSS-ischiensis_contig104 132952..133114 -
1622815561.0890305-CDS-S-ischiensis_contig104:134455..1346101622815561.0890305-CDS-S-ischiensis_contig104:134455..134610Schizocladia ischiensis KU_0333CDSS-ischiensis_contig104 134456..134610 -
1695739770.726482-CDS-S-ischiensis_contig104:134455..1346101695739770.726482-CDS-S-ischiensis_contig104:134455..134610Schizocladia ischiensis KU_0333CDSS-ischiensis_contig104 134456..134610 -
1622815561.1002667-CDS-S-ischiensis_contig104:139469..1395841622815561.1002667-CDS-S-ischiensis_contig104:139469..139584Schizocladia ischiensis KU_0333CDSS-ischiensis_contig104 139470..139584 -
1695739770.7361305-CDS-S-ischiensis_contig104:139469..1395841695739770.7361305-CDS-S-ischiensis_contig104:139469..139584Schizocladia ischiensis KU_0333CDSS-ischiensis_contig104 139470..139584 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig104.1801.1

>prot_S-ischiensis_contig104.1801.1 ID=prot_S-ischiensis_contig104.1801.1|Name=mRNA_S-ischiensis_contig104.1801.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=196bp
GGRAHVFVGGLQRSATTFVSGVLERVPCISGMTAPGDAETMEAMEPWKLH
NFTEKYFLSVVDTGGLEGKFVQTVYPYYNFHKFANLHGIQVTKIKSAVLA
AEAAGNAREKLMEQWGVFWDTSKPTLLEKTPENIIYPTFLQDTFGRESTF
IFSMRHPLCWAMAIHKWMKTDNYMTKLRDVVALWLTAHQLMLHDLP
back to top

mRNA from alignment at S-ischiensis_contig104:130719..139584-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig104.1801.1 ID=mRNA_S-ischiensis_contig104.1801.1|Name=mRNA_S-ischiensis_contig104.1801.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=8866bp|location=Sequence derived from alignment at S-ischiensis_contig104:130719..139584- (Schizocladia ischiensis KU_0333)
GGGGGCAGAGCGCACGTGTTTGTTGGCGGCCTGCAAAGGTCTGCAACGAC ATTTGTCTCGGGGGTGCTGGAACGGGTGCCTTGCATCAGCGGGATGACTG CACCAGGGGACGCAGGTACTGTACTTGGTTGTGATATTCAAACCTCACAG TTGTGCCATGCAAGTACGTCCTGCATTTATGCTTGATTTCGGGTACCATG CACGCACGTCTTTTGCTCAATTCTCGCTGAAACTGCACTGCGACAAGCTT GGTTGTTGTTTAGCACCTTTGGCCATTCACCCAGGGGGGTGTTCATTCAC ACTCAGTCATGTCGTTCCGTGTACACCTGGGTTAATTAATACTACACAAG GGGTTTGTAGGCGATTCTCAAGATATCATACCACTGCAGCATACTCTGTG ATTGTGGAATTCTTGTGGGGGGTTGCTTGTACTGGAGTACTGTACTGTAC TTCCAAGCATACAAAGTGCACAGTTGTCTTCTAAGCACCCAGTGTCGTGG AAGGTCATTGCCACAATGCTGTTCGGGGGTTGTATTGTACCTTAGGTGCC ACGCCTGGGTGGCAAGTACACCCTGGAAGTACTTAGACTTCCGGGTTTGG TGTACCCCCTGCAACAGATGTTCCGTTTTACGTCTTTCAAACTCGCGGCA ATTTGGCCCCTTTTCACACAATTCGCAGCAGCCGTTGCACGGCGAAATGG TCGGCAACGACTGAAAATGCCTCCCAGGCACTGAAATTTGGGAGAAGGGA AACACAACTACTTCGAAGTACAGTACTGTACGAGTATTGGTAGTACTTCG TACTTGGAAGTACTGCACCGGTCAGCGAAGAGCATGGAACAGCACCGACA ACTGGCGGTATGCTCCTCAGCCCGGCAGGTTCACTACTTATGCAGTTGCA AGGGCAAACCCCCGGCTTCTCGCGGCTGCACTGCAGAGTAGAGTATTCGT TTCTTTGTTTCCATCTCATTGTGCTTTAGCAAATGACTGCATTTCCGGCT CCAATTGTTCTTGGATGTCCATTTTGTTTGTTGTCGCCTGGCCTGGAACA GGGGTACATAGTTATAGTGCGGTACAGCTGTACCCCAACATGTACAGTAC AGTGCTCGTATGTGTCTCCTCGTCCCTTGATGTGATGTTGGATTTTTTTA TGCCACACAGCTCGGACAAATGAATGGGATTTGAAAATATTGAACTGGAT TCAATGCCCATATGTGCGTACGAATCATATTGTAACGTACGTTGTGTGCT ACAAATACAGAGTGTAGCGTTTTCGGCACCCCCATTTGTACCGGCAATTC CAATAGTTTTGCAAAAAAAACTGAGGGGCGGTCTTATCGACACACCAAAA AAACCGGATTCTGCCCAGATTCTCGAATGGCCGCCGCTACTCCAGAATCT GGGTTTTGAATGAGATGACCCGGGCTAGCCCTGGGTCGTTCAACACCCAG AATCTCGGACGCTCGGAAACCCAGAATCCGTGTTTCTCGATGCATTCACA TTGGTACCGATGTCTAGGTACTCAGTCCCCTATGATCGGGACGCCCTTCC CGTACACATCGAGCTCCTCCAACATCGGCGCATACACCGAACAACAACAT GACCGGACCGCCGGTGGGCAGAAATGCAAGCAATCGGGCAAATCGCATTT AGGACGGGATCCGCCAGTCCGGCCTGGGATGGTCGACAGAAAAAGGAGAT TCTGGGCTTTTCGACACCCGTGAAAACCGGGCCTGAATCCAGTTGTAACA CACAAGTACAGTTGTAGAGTTTCCGGGCCCCCATTTGTTCAATGTCAATT GCCCCCTACACCTGAATCCGGTTGTAAGCTACAAATATAGCTGTACCGTT TTCACCATCCTCATGTGTACCGGCAATTCGAACTGAATCCAGTTGCAGCA CCCAAATACAGTTGTAGCGTTTTCCGTGCCGTCATTTGCACGGCAACTAG CAATTGCTCCTGCAAATGAGAACAGTTGTGCAGTCAATTCCAGCTGCTCC TGCAAATGAAAACAGCTGCGTGATCAGTCCAATTGCCGCGTAGCCGATCA ATTGGCAAGCAACCGCCGCTGTTGCGTCAGTCGGCTGCAGTAAACAGCTT AGAACATCAACTTCAGGTTGGTGCTGGGGTGGAGGAGGTGCAGGTGATCC TGGCATGGCAGACCCGGGGCTCTGACGCAGGGGCCTTCCGTGGTTATCAG TTGCGCAGTAGCGCCGCCGCTACAAGTGCGCATTTTGTAGGGCCAACGTT GGCCAACGCATCACGTTTACCACCCCTTACTGTGTGCTTCCAAGTATGTA CTTCCTGTACTGTATCTGTATACTACCGCAACTGATAATTAGGGCAAGCA CAGCATGTGTACAACATGTATGTGCAGTAGTATTAACAGGAACAATCCGG TAGAACGTGCAGGCCACAACGTCACGAATGCCTCGATCGCTCGCCCCAAA GAAGTTCGAGGAGGAGGGCGGCCCGCCCCCGGAGGAGGAGGGGGAGGGGG GAGGAAGAGGAAGGAGAGGAAGGGAATATGCAGTAGTACGTTGAGCACAA TCTGGTGGTTTGCGGTTCTGACTGGCCCGTGTGCTTCGTGGCGGAACGAA TCCGATCATCCCTGGGTTCCCCTTTCTCGCACGAACTACATGAATTGCTG CAAGATAATACTGTAATTGCTGCATCCGCACAACTACATGAATTGCTGCA AATGTGGATACAACAGAATCCACTTGCACAGGCAATTGGAATTGTCTCGC ACAGCCGGATTCAGTTGTACGGTTCAAAATCCCAACTGTATCCAGTTGTA CACTGCAAATTTGTTTTTAGCGTATTCGCCATCCTCATTTGTACCGGCAA TTCCCAGCAATTCCGATTGTTTTGTACAACTGAATCCAGTTGTACGTGAC ACATGTCCGGGCCGTCATTTGTAGGGCAATTGGTAGTTGCCAATTGATTT TTCCGACCTGCGATGCCACAGCAGGCCACGCTTCACTACCGTAGGTAGAT CTTTGTCATTTTTCTTTTGCCCTCGCCCTCAGGGGGCTAAAAAACGGGGT TGAAGAAACCGTGGGCTGCTCTATCTACAGGGCCAAATGTGTCGAGTTTG CTCCTGCCTCGGAATAGTGAAGGGCATGTGTAACTGTGATTGGTCTCTTT ACTACAGCAAGCACAACTGTAAGTAGGACAATATCCTCTATGCTTTGAAT ACCATAGCTTGTTGTTATTCTTGACTGTGCCAACAGAGGTGGTGCAAGTT GAAGTTGCAAGTGTGCACCCTTCAACATCACTACCGAGTTAAAATGGGAC CAGTGGTTGAAGCTGGCCCCTTGATGAGGATTGTTACATTATCGACGTTG GAGTTGGCACTGCATTCCGTACCGCGGGGCAGTACACAGTACAGTATGGG AGGTTAGTTTGCATGTATGATTGCAGGCGTAATTCTTAAAGAGTGCAGCA CTTGCTAGGGTCGTGAGGTGGGATGAAAGCTGTGCAACACGGGGTCTTGC GGTTGTAGCTCGGCCAGTTCCACAACATTCCACAAAGTTCCCCCAAGTCC AGGTCCATATTATTGTAGTTGCTTGAGTGGCGCCAACTGCGCGCACGCAC TTCCTACAAAACGGTTGGCAACAACTCGCTCATTTTCCAATCTTTTTGGG TCCCTTTTTCGGCCGTGTCCCAAACCTTGGGACCAGCTCTAATGGAACCA CGCCACCATCACAAGCCATTGAGCCACCCAACTCACCCGTAGCTCCTCTC CTCGATATTTGCGTGGTGGAAGTGAAGTGGAAGTGAAACATACATGGCAT AACCTTGACATGCTCTTCTGCCGGAGGAGTGATGAGCTTGATGACATGCG CCCAATTTTCGTGTTTCGAACGATGATATTGTGATACTTGGTGGTTCAAA CAAGTATTTGCTAGAGCTGTGGACTGGTATGGCACGGCCGGTCGGCTAAA ATGGTAGCCGGCGTCTCAGCCGGTTGTTTTTAGCGGCAAGCTACTGCGCG ATAAGGGCTGTATTTCGGCTGAAGCACTGATAACGCTAATGTCGCCGTCC ACCCGCTACACGTCGAACGTCGAACTATGCAAGATTTTCCAAGAAGAAAT CACCGGAGAAATTCGGCAAGGCTTTGGCATCTTTAAACGGTAGGCCGGTA AACCGCGAACAACCGGCAAAAACCGGCTCCCGTTCTCAGCTCTCGTATTT GCAAGGTACAATGCAAATTTGGATGTGCTCGCTGCAATAGAGTGGGTAAA TCAGTAGCAGTTTGGTGTCAATTGACTTGGTTATGATGCATTTACAAATA AAGAATGGGTTGGTTACAGAGTGCGTGGCGTGTGCGATATTTGGTGTCGA CATCGATTCGATATTTTGATACGCTTGCCGACTGGGCCACCCGCCGGTGG CATGTGTGGGAAGGGGAAACCTGCCGGACATGAGCACACACTAGCATGTA CGAGTAGGCTATGTTGTTGTTCTTGTAACAGCTTCTGGTGTTCAATTCAT GCAGGCGCCCCGAACAGATTGGCAGTTGGGCATGGACACTCTACTTCCCC TTGGAGGACTTCACTGCAGTACAATGTGTGTTCTGGTCCCATGCTTCCCA GTGTTCAAACTGCGTCTTGATTTGTGTGATTTGTGTGCAATGCAGTCTCC TAAGAGTCCTCCGTCCATTAACATTAATACTAACCCTCAGCGAATGCATC CTGCCCCACGCATCTCATGCGACCGACCACACCGCCGCTCAGCGAACGCA TCCTGCCCCACGCATCTCATGTGACCGACCACACCGCCGCCGCTGCGGGT GTGGGTTGTGAGAATCAACGTGCACCTTCCTGTGGGACCATGACAGCGCC AATGAATGCTATGGACAGACAAGACAGTTCGCAGCGCTTGCGCACAGAAG ACGCCACATATACTGAAGTGGAAGTAGCAAGATTAACCGCCACCCCCACC GTTTCCACCACGACGCCACCTCAGAGACCATGGAAGCCATGGAGCCTTGG AAGTTGCACAACTTCACGGAGAAATACTTCCTGTCAGTGGTAGACACGGG GGGGCTGGAGGGAAAGTTCGTGCAGACCGTGTACCCCTACTACAACTTCC ACAAGTTTGCTAACCTGCACGGGATTCAGGCAAGGAGGGTGGGGGAGGGA TGGGGCGAAGGGGACAAAGGGAGGCGAGGGGTAGGAGGACGCACACGCGC AATGCTGAGCTAGCCGCGGTTGTCCTTGTGTTTGGCTGGAAACACGCCAT CGTCTTCTGGGCTTCGGTGTTTTCAGGCAAGGAGGGTGTGGGAGGGATGG GGTGAAGGGGACAAAGGGAGGCGCGGGGTGGGAGGACACGACACACGCAA TGCTGAGCTAGCTGCGGTTGTCCTGTGACCGATGTTGTGTTTGGCTGGAA ACATTTGCTCTGAAAATGAGGGTTAGCCCGCAGTGCACAAGGAGAAAGAG AGCAAGGAGAGAGCAATTTATGGGAGTGGGCACAGGGAGGCGAAACGAGG GCAGGGGGGTCACATGCCAGGCCCATCACACTCTCTGTGTTTGCTTGTCA GTGCACCTGGCCGGCATGAGGCCTTGTGCAAGTGTGGTTTGGTGTGTCTT GTGTGTGTGCATTCACGTGTCGCTATGCGTTGTTAGTGTGTGAGGAGGGG GGTATATCGGTGGGTGGGGTGGGGGCGCTGTTTCGTGCGTGCACATGCAC TCACGTAGCGCTTTGCTGGAGTGTCCTTGGAAGGTTGGACTGCATCTCTC CCCTCCCCTGGTAGACCACGATGTGCATCACACACAGTTTTTGCATTTCA TACTTGGAAGTACTGTGTAGTGTTGCTACAGTACCAGTATCGTAAGTATT CTGCATGTACGTAAGCATGCACTCACATTGTCCTCGCCTTAGTCCAGAGA CCATGTATGTGTACCACGTGCCTCTTCCAAGACTGGAGCGGCATTGTGTG CACTGCGTGCTTGGTTGGCCTTGCTTGGCTCACCAGAGTGGCTTCCAACG CATACTTGGAAGTACTAAATGAAGACACCATAATGCGTGGAATGGGTGAC TGCCACAGTCGTTCAGGTGGCCCCCGCCAGGGTGGGCAGGTATGTACAAC TACAATACTAGTGCAGAGTACCACACACATACGCAGGGGCTAACTTCCCT GAGGCACACCGCACCGTAGGCACGTATGCTTCCGGGGTTCTTGGTAACAT GTTGCCATTGCCATCAGTACTTTCTGTGATTTGCTTTCTAGCCTGTGTGA GTTGCAAGGAAGGGCCGCCGTTGCGATCCTGATGTGATCTCATGTGGTGT GTACGCACGACTGTACTGTAAGTAGACATGACATGAGACGTGACACTGTG CGTTGCGAAGTACTTTCCAAGTACTCTTCGGTACGAGGAAGGATATACCA CGTTGCGGTCCCCTGGTGGGGAAGTGGTCAGCACCTCGCTCATTGAAATG TCTGTACCAAACACTCTCAGGTGACCAAGATCAAGAGCGCTGTCCTCGCG GCTGAGGCGGCGGGCAATGCCCGAGAGAAGCTCATGGAGCAGTGGGGAGT CTTCTGGGACACTTCCAAGCCTACGCTGCTTGAGAAGACGCCGGAGAATA TCATCTACCCCACCTTCCTGCAGGACACCTTTGGTGGGTGCAATGATGTG TATAGTGGCCTTGTTGCGAGCGAAGCGTAGCACGTGGAACATGGTGGAAC GTGCGGAGTGCAGCGTAGCTACTTTTTTCATGACCCCGCGCCTTGACCGA GATGGAGCAGTACTACTGTATTGGTAGGAGTACACTACAGTTCGCATGTA CATAGTACGAGTACTTGGTAGTGCAGTAGTAGTATGTGGTGTACTCGAGT AGGTGCAGGACGAGTAGTAGTAGTAGTTGCAGTGCTGCACTTCCAAGTAT ACATGGTAGGCTGCAGATGCCGCCGGAGGACATTGACTTGGCCACAACAT TTGACCTGTGTTGGTTGGTGGCTCGGCTGGTTGCTCAGGACGGGGTGCGG GAAGGGGGCTATGGAGCGATGGGAGGTTCTTCTGGTCCGTTGGCAGAGGT CTCTTGGTCTGTCGGCGGGTTTCGGTTGGTCCCGTCCAGGTCACTCGATG GGCTCGCGCACCCAACCAAGTAGGGGCTCGCGGGATGTGCATGGGTGGGG CGGTTACGCAGTTTGAGAGGGATCCAGGATCGACCTCGGTGAGGTTGTCG GAGGGGAATCAAAGCATGGAGCTGGACGGAGGCAAGGAATGGGAACTAAA GCAAGAGAGCTGGTCAGATATGCGGTGTTGTGAACTGGTGCCGGTTTGTA CCGGTCGGTACCAGTTAACTAGTATAACCGGTTAACCGACCGGTGGCCAA TCCTGTAGCAGGAGCGGGTGATATAACCGTTATTCGGTGATTTTGGCAAT CCTTTACCCGTTATCGGTAACCAGTTAAAACCGACCGGCCACAAGACCGG TTGACAGTTAAACTGGTAGGCCTTGCCAGTTCACAACCCTACAGATATGG GCTTTGGCAGGTCATGCAAGTAGTCTACAACGTGCCGGCGGCGGCAATGT GTTGGAGGCAACGTGTCAGCAGCCTTCAAGTTTGCCTGTTCAGGACAGGC AAGCCTGACGCAGTGCCGCTGGCGGTCCCTTTCCCCAGAACTCCTTGTTG ACCCGCCCTGCTGCGACCCCCCCCCCCGTTCTCCTCCCCCTCGTCCTGCC CCCGCACGTGCACTCCTCTGTGTTCCCCTGCTCGCTGCCTGCTGATGCGG TGTGTTTTCCTCATGGCTGGCTGTGTGGCCAAATGGCTGGCATGTCAAAC CCCTTGCTCTCGCTGTTCTTTTTTGGGTTGTCGGGGCGCTGTCGCGGGGT GGTGGCCATTCCTGTGGGTGATTGGTGTGGGTGCATGAACGTGTGGAATG GTGTGTCTTGCGGCCAACGGGGGCGGCGGCGGCTGCATTCTGGCCGGTGT GTGCGATGGCGTGTCTTGCGACAAAATGGGGACTGGCGGCGGCCGTGGAG CAGGGCGTGAGTCAACCTTCATCTTTTCGATGCGGCATCCCCTGTGCTGG GCCATGGCAATCCACAAGTGGATGAAGACGTGAGTTCGCCGCCGCCCGTT CTTTTGGCTCGTTTGTGCGCTCGTGCACACCTCTCGCTCATCTCTTCTTC ACCACGCTACATCCGGCTCCCTCCCTGGCTCCTTGTGTTTTCGTGTGCTT GCTGCTTTTTCATCTGCCCGCCCCCCAGTGGGTTAGGCGGGTGGTGGGGG CGGACGCGCCACTAGTCACAGGGGATGTGTGTATGTCATGTGTGTTGTTG GCGGTTGCTCTCGGGTTGGGGCGACCCCGAATCCACCAGGCAGGCGGCGT GGCCATGCCAAAATATATACTGGATGGGTTTACAGCAAAGTGAAGTGAAG CACTGCTGTATTTGGTATGCCGTGCATCTGTACGCCAAAACAGAAGTGGG GTGGGGTTCGACTTGCATGCCGCTTTGCTTGTATCCTCGGGAAGGGGGAG ACTTTGCACCAAACTTCATAGAGGGTGTGCCTGTCAGTGGCCTCTGTACA ACTGCGAGCTTGTTGTGAAGTGAGCTGGCATAAGTACGCTGTTTCCCACT CGCCCCCCCTGCCATTGCTTGGTCAATGCAAATCTGACATGCTCTGTCCC GGCATAGTAGGGAGTTCGAGTATCTATGGCGTATTGGCTAGGTATGACCA CAAGTATGCACATCGTGCCTTGAGTGAACACGCCCCCTTCCCCCGGCACG TCAAACCCCCCGCCCCTTGTGGGCCGACCTACCCCAGGGATAACTACATG ACCAAGTTGAGGGACGTGGTGGCGCTGTGGTTGACAGCGCACCAGCTGAT GCTGCATGACCTGCCG
back to top

Coding sequence (CDS) from alignment at S-ischiensis_contig104:130719..139584-

>mRNA_S-ischiensis_contig104.1801.1 ID=mRNA_S-ischiensis_contig104.1801.1|Name=mRNA_S-ischiensis_contig104.1801.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1176bp|location=Sequence derived from alignment at S-ischiensis_contig104:130719..139584- (Schizocladia ischiensis KU_0333)
GGGGGCAGAGCGCACGTGTTTGTTGGCGGCCTGCAAAGGTCTGCAACGAC
ATTTGTCTCGGGGGTGCTGGAACGGGTGCCTTGCATCAGCGGGATGACTG
CACCAGGGGACGCAGGGGGGCAGAGCGCACGTGTTTGTTGGCGGCCTGCA
AAGGTCTGCAACGACATTTGTCTCGGGGGTGCTGGAACGGGTGCCTTGCA
TCAGCGGGATGACTGCACCAGGGGACGCAGAGACCATGGAAGCCATGGAG
CCTTGGAAGTTGCACAACTTCACGGAGAAATACTTCCTGTCAGTGGTAGA
CACGGGGGGGCTGGAGGGAAAGTTCGTGCAGACCGTGTACCCCTACTACA
ACTTCCACAAGTTTGCTAACCTGCACGGGATTCAGAGACCATGGAAGCCA
TGGAGCCTTGGAAGTTGCACAACTTCACGGAGAAATACTTCCTGTCAGTG
GTAGACACGGGGGGGCTGGAGGGAAAGTTCGTGCAGACCGTGTACCCCTA
CTACAACTTCCACAAGTTTGCTAACCTGCACGGGATTCAGGTGACCAAGA
TCAAGAGCGCTGTCCTCGCGGCTGAGGCGGCGGGCAATGCCCGAGAGAAG
CTCATGGAGCAGTGGGGAGTCTTCTGGGACACTTCCAAGCCTACGCTGCT
TGAGAAGACGCCGGAGAATATCATCTACCCCACCTTCCTGCAGGACACCT
TTGGTGACCAAGATCAAGAGCGCTGTCCTCGCGGCTGAGGCGGCGGGCAA
TGCCCGAGAGAAGCTCATGGAGCAGTGGGGAGTCTTCTGGGACACTTCCA
AGCCTACGCTGCTTGAGAAGACGCCGGAGAATATCATCTACCCCACCTTC
CTGCAGGACACCTTTGGGCGTGAGTCAACCTTCATCTTTTCGATGCGGCA
TCCCCTGTGCTGGGCCATGGCAATCCACAAGTGGATGAAGACGGCGTGAG
TCAACCTTCATCTTTTCGATGCGGCATCCCCTGTGCTGGGCCATGGCAAT
CCACAAGTGGATGAAGACGGATAACTACATGACCAAGTTGAGGGACGTGG
TGGCGCTGTGGTTGACAGCGCACCAGCTGATGCTGCATGACCTGCCGGGA
TAACTACATGACCAAGTTGAGGGACGTGGTGGCGCTGTGGTTGACAGCGC
ACCAGCTGATGCTGCATGACCTGCCG
back to top