mRNA_S-ischiensis_contig104.1801.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig104.1801.1 vs. uniprot
Match: A0A835ZH03_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH03_9STRA) HSP 1 Score: 197 bits (500), Expect = 8.130e-60 Identity = 97/193 (50.26%), Postives = 134/193 (69.43%), Query Frame = 1
Query: 16 VFVGGLQRSATTFVSGVLERVPCISGMTAPG-DAETMEAMEPWKLHNFTEKYFLSVVDTGGLEGKFVQTVYPYYNFHKFANLHGIQVTKIKSAVLAAEAAGNAREKLMEQWGVFWDTSKPTLLEKTPENIIYPTFLQDTFGREST-FIFSMRHPLCWAMAIHKWMKTDN-YMTKLRDVVALWLTAHQLMLHDL 585
VFVGGLQRSATT ++ +++R+PC+S ++ AE + EPWKL+ FTE YFL+V TGGLEGKFVQT YPY+N + N GI+V I+ V +++ + R +L +QW +W+ + P LLEKTPENI++ ++LQ FG T FIF +RHPL WA+A+ KW+ + Y+ RD+VA WLT HQ ML+DL
Sbjct: 15 VFVGGLQRSATTLLADLIQRLPCVSSLSLDNVSAEELARREPWKLNGFTEDYFLNVHRTGGLEGKFVQTAYPYHNLIRETNQEGIRVEAIRRKV-SSQLSAQTRAQLRQQWTPYWNLTHPVLLEKTPENILWSSYLQGAFGSTDTSFIFVLRHPLTWALAVRKWVSDRHRYLLSTRDLVAFWLTVHQHMLNDL 206
BLAST of mRNA_S-ischiensis_contig104.1801.1 vs. uniprot
Match: A0A7S2WKR9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WKR9_9STRA) HSP 1 Score: 131 bits (330), Expect = 1.550e-33 Identity = 83/206 (40.29%), Postives = 119/206 (57.77%), Query Frame = 1
Query: 1 GGRAHVFVGGLQRSATTFVSGVLERVP--CISGMTAPGDAETMEAMEPWKLHNFTEKYFLSVVDTGGLEGKFVQTVYPY-YNFHKFANLHGIQVTKIKSAVLAAEAAGNARE---KLMEQWGVFWDTSKPTLLEKTPENIIYPTFLQDTFGREST-FIFSMRHPLCWAMAIHKWMKTDN---YMTKLRDVVALWLTAHQLMLHDLP 588
GG+ ++FVGGLQR+ TT+++ + R + + G+ +E PW + F +YF SVV TGGLEGKFVQTVYP+ Y F G + + S A A+ +RE KL+E+WG++W TS LEKTPENI+ LQ G E T F+F+ RHPL W++A+ K+++ Y + R +AL + H + HDLP
Sbjct: 8 GGQQYIFVGGLQRTGTTYLAETIGRTAGAALQSLEWMGEQNYLE-YSPWSIQGFDRRYFESVVRTGGLEGKFVQTVYPFPYVLRDF----GERKQPVHSLFQNATASFVSRENGLKLIEEWGLWWPTSAHLRLEKTPENILMSPALQALLGAERTSFVFTFRHPLAWSLAVSKFVRPSMAQLYFVENRLRLALSVMRH-FVDHDLP 207
BLAST of mRNA_S-ischiensis_contig104.1801.1 vs. uniprot
Match: A0A7S4C5P6_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C5P6_CHRCT) HSP 1 Score: 114 bits (286), Expect = 4.240e-27 Identity = 73/177 (41.24%), Postives = 101/177 (57.06%), Query Frame = 1
Query: 7 RAHVFVGGLQRSATTFVSGVLERVPCISGM--TAPGDAETMEAMEPWK----LHN---FTEKYFLSVVDTGGLEGKFVQTVYPY-YNFH--KFANLHGIQVTKIKSAVLAAEAAGNAREKLMEQWGVFWDTSKPTLLEKTPENIIYPTFLQDTFGRESTFIFSMRHPLCWAMAIHKW 501
R +FVGGLQRS T+ ++G+L R+P +G+ A A+ EA PWK +H YF VV TGG EGK +Q+V+PY Y H KFA L + + L A AA R L QW FW + P ++K+PEN++ FLQ +FG ++F+F +RHPL W++A KW
Sbjct: 176 RRALFVGGLQRSGTSMLAGLLTRLPGAAGLHFNASSLADMEEA--PWKSLSDVHTGGWMKWAYFREVVATGGAEGKLLQSVFPYRYTLHDAKFAGLRALLSAPSSLSPLRARAA---RRALWSQWRRFWRPA-PLFVDKSPENMLMAPFLQASFGASASFLFVLRHPLSWSLAAAKW 346
BLAST of mRNA_S-ischiensis_contig104.1801.1 vs. uniprot
Match: A0A7S2NFR8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2NFR8_9EUKA) HSP 1 Score: 104 bits (259), Expect = 9.580e-25 Identity = 55/136 (40.44%), Postives = 85/136 (62.50%), Query Frame = 1
Query: 16 VFVGGLQRSATTFVSGVLERVPCISGMTAPG-DAETMEAMEPWKLHNFTEKYFLSVVDTGGLEGKFVQTVYPYYNFHKFANLHGIQVTKIKSAVLAAEAAGNAREKLMEQWGVFWDTSKPTLLEKTPENIIYPTFL 420
+F+GGLQRS TT++ G++ P +SG++ D + +PW L N T+ YF VV +GG+EGKFVQ+VYPY N + + + + V ++ A+ A +L ++W +FWDT+KP LLEKTPE+ + +L
Sbjct: 45 LFMGGLQRSGTTWLEGLVTS-PSVSGLSFDNVDLGEYQRQQPWLLQNHTQAYFELVVRSGGVEGKFVQSVYPYVNLFRDVGKNSRPLNTL--IVNSSAASPQAGTQLFKEWALFWDTTKPFLLEKTPEHFLMGPYL 177
BLAST of mRNA_S-ischiensis_contig104.1801.1 vs. uniprot
Match: A0A7S3JQB0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JQB0_9STRA) HSP 1 Score: 107 bits (267), Expect = 5.290e-24 Identity = 72/203 (35.47%), Postives = 98/203 (48.28%), Query Frame = 1
Query: 7 RAHVFVGGLQRSATTFVSGVLERVPCISGMTAPGDAETMEAMEPWKLHNFTEKYFLSVVDTGGLEGKFVQTVYPY-YNFHKFANLHGIQVTKIK-SAVLAAEAAGNAREKLMEQWGVFWDTSKPTLLEKTPENIIYPTFLQDTFGR-----ESTFIFSMRHPLCWAMAIHKWMKTD---NYMTKLRDV---VALWLTAHQLML 576
R VFVGGLQRS TT + +LE + M KL Y + +GGLEGKFVQ VYPY Y ++ + + K S+ L GN +L +QW FW+ S L+EKTPENI+ FLQ F + F+F +RHPL W++ I KW++ ++ LR + V +WL ML
Sbjct: 64 RTIVFVGGLQRSGTTTAATLLENIDESWSKQQVRQELGMIVNRIAKLRGMNPSYVKDTLSSGGLEGKFVQNVYPYHYLLKEWGSGGNTAIDKFSLSSELVQPDTGN---RLWQQWHSFWNESATVLIEKTPENILMSQFLQSAFQNITIPNKVAFVFVLRHPLAWSLVIDKWLRNKWNRDFTKSLRPLQARVQMWLDVTTTML 263
BLAST of mRNA_S-ischiensis_contig104.1801.1 vs. uniprot
Match: A0A5B7SJP5_9FLAO (Sulfotransferase n=1 Tax=Aggregatimonas sangjinii TaxID=2583587 RepID=A0A5B7SJP5_9FLAO) HSP 1 Score: 72.4 bits (176), Expect = 6.230e-12 Identity = 45/146 (30.82%), Postives = 80/146 (54.79%), Query Frame = 1
Query: 163 KYFLSVVDTGGLE--GKFVQTVYP----YYNFHKFANLHGIQVTKIKSAVLAAEAAGNAREKLMEQWGVFWDTSKPTLLEKTPENIIYPTFLQDTFGRESTFIFSMRHPLCWAMAIHKWMKTDNYMTKLRDVVALWLTAHQLMLHD 582
++F DTG E G+ +Q+V+P + KFA ++ + + + GN REK++++WG +WD KP +EK+P N+I F Q+ F + + FI RHP+ ++A KW +T + +++ W+TAH++ +D
Sbjct: 26 EHFSGFHDTGIFEDEGQHLQSVFPPDMDFGGPGKFAFDQNSRLDETSALI----TPGN-REKILKEWGKYWDKEKPFWIEKSPPNLIRMRFFQELFPK-AYFITISRHPIAVSLATKKWSRTS-----VPNLIKHWVTAHEIYRND 160
BLAST of mRNA_S-ischiensis_contig104.1801.1 vs. uniprot
Match: A0A0M0JEP1_9EUKA (Nodulation protein noee n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JEP1_9EUKA) HSP 1 Score: 68.6 bits (166), Expect = 3.860e-10 Identity = 35/101 (34.65%), Postives = 57/101 (56.44%), Query Frame = 1
Query: 298 AAEAAGNAREKLMEQWGVFWDTSKPTLLEKTPENIIYPTFLQDTFG----RESTFIFSMRHPLCWAMAIHKWMKTDNYMTKLRDVVALWLTAHQLMLHDLP 588
A N+R+ L+ QWG FW+TS+P LLEKTP +++ LQ ++++F+F RHPL A+A +W + + + WL +H+++ DLP
Sbjct: 104 ALNTRANSRQ-LLSQWGYFWNTSRPVLLEKTPTDMLTSRLLQALLSPPPRQQTSFVFLTRHPLAVALAHMRWPACRHQ--SVGSLALHWLVSHRVLASDLP 201
BLAST of mRNA_S-ischiensis_contig104.1801.1 vs. uniprot
Match: A0A2T0QD75_9ACTN (Sulfotransferase family protein n=1 Tax=Allonocardiopsis opalescens TaxID=1144618 RepID=A0A2T0QD75_9ACTN) HSP 1 Score: 64.7 bits (156), Expect = 4.320e-9 Identity = 53/195 (27.18%), Postives = 83/195 (42.56%), Query Frame = 1
Query: 16 VFVGGLQRSATTFVSGVLERVPCISGMTAPGDAETMEAMEPWKLHNFTEKYFLSVVDTGGLEGKFVQTVYP----YYNFHKFANLHGIQVTKIKSAVLAAEAAGNAREKLMEQWGVFWDTSKPTLLEKTPENIIYPTFLQDTFGRESTFIFSMRHPLCWAMAIHKWMKTDNYMTKLRDVVALWLTAHQLMLHDLP 588
VFVGGL S +S L P +S + DAE + TE Q+VYP Y +F +T+ V + A ++L+ WG +WD SK L+E P N++ FLQ + ++ F+ +RHP+ A+ + + ++ ++ WLTAH+L L D P
Sbjct: 9 VFVGGLHHSGACQLSDALAAHPDVSVLAGTPDAE-----------DSTEHR---------------QSVYPPDTVYGGAGRFCFDAEAHLTESSPLVRRSAA-----QRLLHDWGRYWDLSKRVLVETAPPNLVMTRFLQRLYP-DAVFVLMVRHPV----AVSVETRHSRWTASMQSLLEHWLTAHELFLSDAP 167
BLAST of mRNA_S-ischiensis_contig104.1801.1 vs. uniprot
Match: A0A7S1SEA8_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1SEA8_ALECA) HSP 1 Score: 58.5 bits (140), Expect = 1.010e-6 Identity = 30/93 (32.26%), Postives = 47/93 (50.54%), Query Frame = 1
Query: 319 AREKLMEQWGVFWDTSKPTLLEKTPENIIYPTFLQDTFG-----RESTFIFSMRHPLCWAMAIHKWMKTDNYMTKLRDVVALWLTAHQLMLHD 582
++++L QW +FWD S+P L+EK+P N + FL +G + FIF RHP+ AMA + + D+V W+ A + D
Sbjct: 174 SQQRLFNQWALFWDLSRPVLMEKSPSNGVISPFLHRLWGLGLDSSPARFIFLQRHPIAVAMATQRAGGLAVNDLGIADLVENWVVAEERRTED 266 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig104.1801.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig104.1801.1 >prot_S-ischiensis_contig104.1801.1 ID=prot_S-ischiensis_contig104.1801.1|Name=mRNA_S-ischiensis_contig104.1801.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=196bp GGRAHVFVGGLQRSATTFVSGVLERVPCISGMTAPGDAETMEAMEPWKLHback to top mRNA from alignment at S-ischiensis_contig104:130719..139584- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig104.1801.1 ID=mRNA_S-ischiensis_contig104.1801.1|Name=mRNA_S-ischiensis_contig104.1801.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=8866bp|location=Sequence derived from alignment at S-ischiensis_contig104:130719..139584- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig104:130719..139584- >mRNA_S-ischiensis_contig104.1801.1 ID=mRNA_S-ischiensis_contig104.1801.1|Name=mRNA_S-ischiensis_contig104.1801.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1176bp|location=Sequence derived from alignment at S-ischiensis_contig104:130719..139584- (Schizocladia ischiensis KU_0333)back to top |