mRNA_S-ischiensis_contig103.1788.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig103.1788.1 vs. uniprot
Match: UPI001BFC594E (HNH endonuclease n=3 Tax=Escherichia coli TaxID=562 RepID=UPI001BFC594E) HSP 1 Score: 77.8 bits (190), Expect = 1.160e-15 Identity = 46/111 (41.44%), Postives = 63/111 (56.76%), Query Frame = 1
Query: 7 RLVYRTWVGHFPTNE---SAVNGKMAERFVLDHKDDNKANNHADNLDFVSHTANSRKRAGRNTNNSSGVNGVAWHNRGGKWMAYIPVKGKRRNLGYFDDKRDAEKARLDAQ 330
R++ + G +P + NG + E + +DH D N N+ +NL VSH N R ++ ++ NN+SG G+ W KW AYI V G RNLGYFDD RDA KAR A+
Sbjct: 42 RVIIKLKGGMYPASRIIWEMHNGPIPEGYEIDHIDHNTRNDSINNLRLVSHVENLRNKS-KHKNNTSGYTGIIWVKGCKKWRAYITVNGDWRNLGYFDDIRDAVKAREKAE 151
BLAST of mRNA_S-ischiensis_contig103.1788.1 vs. uniprot
Match: A0A0F8YQU9_9ZZZZ (HNHc domain-containing protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F8YQU9_9ZZZZ) HSP 1 Score: 72.4 bits (176), Expect = 1.320e-13 Identity = 48/110 (43.64%), Postives = 57/110 (51.82%), Query Frame = 1
Query: 4 HRLVYRTWVGHFPTNESAVNGKMAERFVLDHKDDNKANNHADNLDFVSHTANSRKRAGRNTNNSSGVNGVAWHNRGGKWMAYIPVKGKRRNLGYFDDKRDAEKARLDAQK 333
HRLV+ G+FP NE +DH D NK NNH +NL VS T NSR G +N SGV GV + KW A+I V GK LGYF DA AR + +K
Sbjct: 60 HRLVWLYHYGYFPENE------------IDHIDQNKLNNHINNLREVSSTCNSRN-CGNRKDNISGVKGVVPYKSRSKWRAHITVSGKMITLGYFVKFVDAVMARYEKEK 156
BLAST of mRNA_S-ischiensis_contig103.1788.1 vs. uniprot
Match: A5H1L2_9CAUD (p42.1 n=1 Tax=Xanthomonas virus Xop411 TaxID=470314 RepID=A5H1L2_9CAUD) HSP 1 Score: 71.2 bits (173), Expect = 4.380e-13 Identity = 43/113 (38.05%), Postives = 62/113 (54.87%), Query Frame = 1
Query: 1 VHRLVYRTWVGHFPTNESAVNGKMAERFVLDHKDDNKANNHADNLDFVSHTANSRKRAGRNTNNSSGVNGVAWHNRGGKWMAYIPVKGKRRNLGYFDDKRDAEKARLDAQKTY 339
VHRL + G +P + LDH + + +N +NL S+ NS+ R G+ +NN+SGV GV+W+ R GKW A I + GK +LGYFD +A AR A++ Y
Sbjct: 59 VHRLAWLLHTGSWPIQQ------------LDHINRVRDDNRIENLRECSNAENSQNR-GKQSNNTSGVTGVSWYKRSGKWQALIKLNGKHIHLGYFDTIEEAATARSAAKRKY 158
BLAST of mRNA_S-ischiensis_contig103.1788.1 vs. uniprot
Match: UPI000D359814 (HNH endonuclease n=2 Tax=Enterobacteriaceae TaxID=543 RepID=UPI000D359814) HSP 1 Score: 66.6 bits (161), Expect = 2.290e-11 Identity = 43/109 (39.45%), Postives = 58/109 (53.21%), Query Frame = 1
Query: 1 VHRLVYRTWVGHFPTNESAVNGKMAERFVLDHKDDNKANNHADNLDFVSHTANSRKRAGRNTNNSSGVNGVAWHNRGGKWMAYIPVKGKRRNLGYFDDKRDAEKARLDA 327
VHR++ W H NG + +DH D N NN NL V+H N R + R+TN SG GV+W+ + KW A I + GK + LG+FDD +DA +AR A
Sbjct: 52 VHRII---WEMH--------NGAIDSGMYVDHIDGNTFNNRLSNLRLVTHQDNHRNQKTRSTN-KSGYLGVSWNKQHQKWQASIKLSGKVKYLGWFDDIKDAARARKAA 148
BLAST of mRNA_S-ischiensis_contig103.1788.1 vs. uniprot
Match: UPI0007351C76 (HNH endonuclease n=7 Tax=Enterobacterales TaxID=91347 RepID=UPI0007351C76) HSP 1 Score: 63.9 bits (154), Expect = 2.680e-10 Identity = 40/115 (34.78%), Postives = 62/115 (53.91%), Query Frame = 1
Query: 4 HRLVYRTWVGHFPTNESAVNGKMAERFVLDHKDDNKANNHADNLDFVSHTANSRKRAGRNTNNSSGVNGVAWHNRGGKWMAYIPVKGKRRNLGYFDDKRDAEKARLDAQKTYWGD 348
HR+ + G +P + +DH + N +N NL V+ N+ R+ +NN+SGV GV++ R GKW A+I V GK ++LGYF K DA AR ++T++G+
Sbjct: 59 HRIAFLLMTGSWPKS------------YIDHINRNPRDNRFCNLREVTPLQNTMNRSVA-SNNTSGVAGVSYEERRGKWRAHIKVNGKMKSLGYFKQKEDAIAARKKGEETHFGE 160
BLAST of mRNA_S-ischiensis_contig103.1788.1 vs. uniprot
Match: A0A5U1N0Y7_SALER (HNH endonuclease n=13 Tax=Enterobacteriaceae TaxID=543 RepID=A0A5U1N0Y7_SALER) HSP 1 Score: 63.9 bits (154), Expect = 3.750e-10 Identity = 39/109 (35.78%), Postives = 60/109 (55.05%), Query Frame = 1
Query: 4 HRLVYRTWVGHFPTNESAVNGKMAERFVLDHKDDNKANNHADNLDFVSHTANSRKRAGRNTNNSSGVNGVAWHNRGGKWMAYIPVKGKRRNLGYFDDKRDAEKARLDAQ 330
HR+ + + G++P E +DH ++++N NL V+ AN++ +TN +GV GV W+ GKW A I V GK +++GYFDD R+A KAR A+
Sbjct: 71 HRVAWALYYGYWPEQE------------IDHISGDRSDNRIHNLRSVTSAANNKNLRLYSTN-KTGVPGVGWYKARGKWRAKINVSGKVKHIGYFDDFREAVKARKAAE 166
BLAST of mRNA_S-ischiensis_contig103.1788.1 vs. uniprot
Match: A0A6L5PHZ1_9CAUL (HNH endonuclease n=1 Tax=Brevundimonas sp. SPF441 TaxID=2663795 RepID=A0A6L5PHZ1_9CAUL) HSP 1 Score: 63.9 bits (154), Expect = 4.070e-10 Identity = 37/112 (33.04%), Postives = 61/112 (54.46%), Query Frame = 1
Query: 4 HRLVYRTWVGHFPTNESAVNGKMAERFVLDHKDDNKANNHADNLDFVSHTANSRKRAGRNTNNSSGVNGVAWHNRGGKWMAYIPVKGKRRNLGYFDDKRDAEKARLDAQKTY 339
HR+++ G FP ++ +DH + +A+N +NL V++ N R ++ +NSSG NGV+W +WMAYI + G+ +NLG F +A +AR +A K +
Sbjct: 78 HRVIWLMQTGRFPEDQ------------IDHINGVRADNRLENLRAVTNAENQRNKS-LQRDNSSGSNGVSWSKTRNRWMAYININGRMKNLGRFKTIEEAIQARSEASKLH 176
BLAST of mRNA_S-ischiensis_contig103.1788.1 vs. uniprot
Match: A0A2H4PGL0_9CAUD (HNHc domain-containing protein n=1 Tax=Escherichia phage DTL TaxID=2048061 RepID=A0A2H4PGL0_9CAUD) HSP 1 Score: 63.5 bits (153), Expect = 4.430e-10 Identity = 39/108 (36.11%), Postives = 61/108 (56.48%), Query Frame = 1
Query: 1 VHRLVYRTWVGHFPTNESAVNGKMAERFVLDHKDDNKANNHADNLDFVSHTANSRKRAGRNTNNSSGVNGVAWHNRGGKWMAYIPVKGKRRNLGYFDDKRDAEKARLD 324
VH++VY G K+ + V+DH D +K+NNH NL + + N+R A R ++N +GV GV + +R GK+ AY + KR +LG++D+ DA AR +
Sbjct: 65 VHKIVYEIETGQ----------KVPDEMVVDHIDGDKSNNHISNLRLATWSENTRN-AKRRSDNKTGVTGVCYMSRTGKFAAYARYEKKRYHLGFYDNIDDAIAARAE 161
BLAST of mRNA_S-ischiensis_contig103.1788.1 vs. uniprot
Match: UPI001FB136EB (HNH endonuclease n=1 Tax=Enterobacter hormaechei TaxID=158836 RepID=UPI001FB136EB) HSP 1 Score: 61.2 bits (147), Expect = 7.250e-10 Identity = 36/87 (41.38%), Postives = 54/87 (62.07%), Query Frame = 1
Query: 88 LDHKDDNKANNHADNLDFVSHTANSRKRAGRNTNNSSGVNGVAWHNRGGKWMAYIPVKGKRRNLGYFDDKRDAEKARLDAQKTYWGD 348
+DH + N +N NL V+ N+ R+ +NN+SGV GV++ R GKW A+I V GK ++LGYF K DA AR ++T++G+
Sbjct: 10 IDHINRNPRDNRFCNLREVTPLQNTMNRSVA-SNNTSGVAGVSYEERRGKWRAHIKVNGKMKSLGYFKRKEDAIAARKKGEETHFGE 95
BLAST of mRNA_S-ischiensis_contig103.1788.1 vs. uniprot
Match: UPI001C712395 (HNH endonuclease n=5 Tax=Enterobacter TaxID=547 RepID=UPI001C712395) HSP 1 Score: 63.9 bits (154), Expect = 7.820e-10 Identity = 40/115 (34.78%), Postives = 62/115 (53.91%), Query Frame = 1
Query: 4 HRLVYRTWVGHFPTNESAVNGKMAERFVLDHKDDNKANNHADNLDFVSHTANSRKRAGRNTNNSSGVNGVAWHNRGGKWMAYIPVKGKRRNLGYFDDKRDAEKARLDAQKTYWGD 348
HR+ + G +P + +DH + N +N NL V+ N+ R+ +NN+SGV GV++ R GKW A+I V GK ++LGYF K DA AR ++T++G+
Sbjct: 131 HRIAFLLMTGSWPKS------------YIDHINRNPRDNRFCNLREVTPLQNTMNRSVA-SNNTSGVAGVSYEERRGKWRAHIKVNGKMKSLGYFKQKEDAIAARKKGEETHFGE 232 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig103.1788.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig103.1788.1 >prot_S-ischiensis_contig103.1788.1 ID=prot_S-ischiensis_contig103.1788.1|Name=mRNA_S-ischiensis_contig103.1788.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=119bp VHRLVYRTWVGHFPTNESAVNGKMAERFVLDHKDDNKANNHADNLDFVSHback to top mRNA from alignment at S-ischiensis_contig103:278052..278408+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig103.1788.1 ID=mRNA_S-ischiensis_contig103.1788.1|Name=mRNA_S-ischiensis_contig103.1788.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=357bp|location=Sequence derived from alignment at S-ischiensis_contig103:278052..278408+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig103:278052..278408+ >mRNA_S-ischiensis_contig103.1788.1 ID=mRNA_S-ischiensis_contig103.1788.1|Name=mRNA_S-ischiensis_contig103.1788.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=714bp|location=Sequence derived from alignment at S-ischiensis_contig103:278052..278408+ (Schizocladia ischiensis KU_0333)back to top |