mRNA_S-ischiensis_contig103.1781.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig103.1781.1 vs. uniprot
Match: D7FHC9_ECTSI (Vesicle transport protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHC9_ECTSI) HSP 1 Score: 200 bits (508), Expect = 1.560e-56 Identity = 98/162 (60.49%), Postives = 120/162 (74.07%), Query Frame = 3
Query: 21 INIPGITR-QEPTFADEMCEACPTLTYQQRVIGFVVCVGVGYVFSFLGSMMLIGGGIREFAALYVLGSLIALSATGFLIGPKSQCKKMFKPTRRIACIVYLTLLVVVFAVAIAGLPVGLVLILLIIQCIAAVWYMASYIPYGRKMIKSVCCPCLKDLEEEGG 503
+NIPG R QEPT A+EMCE CP+LT+QQRV GFV C+ +GY+ SFL ++ML G + FA +Y LGSLIA+ AT FLIGP+ QC KMF RRIAC++YL LL V +A G P G++L++LI+Q AAVWY ASYIPYGR MIK CPCLKDLE + G
Sbjct: 35 VNIPGFRREQEPTLANEMCEMCPSLTFQQRVGGFVACLALGYLLSFLSTVMLWSGDLSSFALIYCLGSLIAIGATSFLIGPRRQCGKMFHKKRRIACVIYLVLLFAVIILAFLGTPAGIILLVLIVQMCAAVWYTASYIPYGRAMIKGTLCPCLKDLENQDG 196
BLAST of mRNA_S-ischiensis_contig103.1781.1 vs. uniprot
Match: A0A835YKD4_9STRA (Vesicle transport protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKD4_9STRA) HSP 1 Score: 186 bits (473), Expect = 9.650e-52 Identity = 101/167 (60.48%), Postives = 120/167 (71.86%), Query Frame = 3
Query: 21 INIPGITRQEPTF-----ADEMCEACPTLTYQQRVIGFVVCVGVGYVFSFLGSMMLIGGG---IREFAALYVLGSLIALSATGFLIGPKSQCKKMFKPTRRIACIVYLTLLVVVFAVAIAGLPVGLVLILLIIQCIAAVWYMASYIPYGRKMI-KSVCCPCLKDLEE 494
I++PG P AD+MC CPTLTYQQRVIGFV + VGY+ SF+G+++LIGGG IR FA LYVLG+LIALS TGFLIGPKS CKKMF RR A I YL +L+VVF A+AG V +VL+LL+IQCIAAVWY ASYIPYGR MI + C PC ++
Sbjct: 7 ISVPGFRNTAPANEGGFNADDMCACCPTLTYQQRVIGFVTTMIVGYILSFVGTLLLIGGGPAGIRGFAVLYVLGNLIALSGTGFLIGPKSHCKKMFHKNRRFAAIFYLVMLLVVFIAAVAGAFVAIVLVLLVIQCIAAVWYTASYIPYGRTMIINTFCGPCKDSFKD 173
BLAST of mRNA_S-ischiensis_contig103.1781.1 vs. uniprot
Match: F0Y4B6_AURAN (Vesicle transport protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4B6_AURAN) HSP 1 Score: 169 bits (429), Expect = 1.500e-45 Identity = 87/154 (56.49%), Postives = 114/154 (74.03%), Query Frame = 3
Query: 45 QEPTFADEMCEACPTLTYQQRVIGFVVCVGVGYVFSFLGSMMLIGGG-----IREFAALYVLGSLIALSATGFLIGPKSQCKKMFKPTRRIACIVYLTLLVVVFAVAIAGLPVGLVLILLIIQCIAAVWYMASYIPYGRKMI----KSVCC-PC 476
QE +F DE C+ CP LTYQQR+IGF C G GY+ SF+G+MML GG IR FA LY++G+ IA++AT FL+GP+SQCKKMF TRR + I +L L+V FAVA+AG+ VG+V++L+ +Q A++WY ASYIPYGR+MI +S CC PC
Sbjct: 9 QEQSFEDEACDGCPKLTYQQRIIGFCACCGFGYLLSFMGTMMLAVGGPDAETIRNFATLYIVGNFIAIAATLFLLGPRSQCKKMFDKTRRFSTIFWLLTLIVTFAVAVAGVNVGVVVMLIFVQIGASIWYSASYIPYGRRMIVKIFQSTCCSPC 162
BLAST of mRNA_S-ischiensis_contig103.1781.1 vs. uniprot
Match: A0A8J2WZP9_9STRA (Vesicle transport protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZP9_9STRA) HSP 1 Score: 166 bits (420), Expect = 3.170e-44 Identity = 81/141 (57.45%), Postives = 104/141 (73.76%), Query Frame = 3
Query: 48 EPTFADEMCEACPTLTYQQRVIGFVVCVGVGYVFSFLGSMMLIGGG-----IREFAALYVLGSLIALSATGFLIGPKSQCKKMFKPTRRIACIVYLTLLVVVFAVAIAGLPVGLVLILLIIQCIAAVWYMASYIPYGRKMI 455
+PTF DEMC CP++TYQQR+IGF +C G GY SF+G++ML+ + FA LYV G+ IA++ATGFLIGP+ QCKKMF TRR ACI +L +LVV FA+ ++G+ VG VL+ L IQ A +WY ASYIPYGR+MI
Sbjct: 14 QPTFEDEMCSMCPSMTYQQRLIGFCICCGCGYALSFMGTLMLLSKDPWKKRVTNFAILYVFGNFIAIAATGFLIGPRRQCKKMFSKTRRFACIFWLLMLVVTFALGLSGVDVGWVLLALFIQVCAGIWYSASYIPYGRRMI 154
BLAST of mRNA_S-ischiensis_contig103.1781.1 vs. uniprot
Match: W7TZX0_9STRA (Vesicle transport protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZX0_9STRA) HSP 1 Score: 160 bits (404), Expect = 6.960e-41 Identity = 84/146 (57.53%), Postives = 111/146 (76.03%), Query Frame = 3
Query: 27 IPGITRQEPTFADEMCEACPTLTYQQRVIGFVVCVGVGYVFSFLGSMMLIG---GGIREFAALYVLGSLIALSATGFLIGPKSQCKKMFKPTRRIACIVYLTLLVVVFAVAIAGLPVGLVLILLIIQCIAAVWYMASYIPYGRKMI 455
+PG QE + +E+C CP+LTYQQR+IGFV C +GY+ SF+G++ LI GIR FAALYV+G++IAL +TGFL+GPKSQCKKMF TRR + I+Y+ +L+VVFAVA+A V LVL LLIIQ + AVWY SY+P+GR+ +
Sbjct: 23 LPGA--QEESVTEEVCAMCPSLTYQQRMIGFVGCFCLGYLLSFIGTLSLISMTADGIRNFAALYVVGNIIALCSTGFLVGPKSQCKKMFDKTRRYSTILYIIMLIVVFAVALARQNVFLVLFLLIIQVLVAVWYTLSYVPFGRQAV 166
BLAST of mRNA_S-ischiensis_contig103.1781.1 vs. uniprot
Match: H3H035_PHYRM (Vesicle transport protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H035_PHYRM) HSP 1 Score: 139 bits (350), Expect = 2.770e-34 Identity = 76/138 (55.07%), Postives = 98/138 (71.01%), Query Frame = 3
Query: 60 ADEMCEACPTLTYQQRVIGFVVCVGVGYVFSFLGSMMLIGGGIR--EFAALYVLGSLIALSATGFLIGPKSQCKKMFKPTRRIACIVYLTLLVVVFAVAIAGLPVGLVLILLI-IQCIAAVWYMASYIPYGRKMIKSV 464
+D + CP+LT QQR++GFV C +GY+ SF + LI G +F Y LG++I+L +GFL+GPK Q K MFKP RRIA IVYL ++VVVF VAIA +GLV++LL+ IQC AAVWY ASY+PYGRK+I V
Sbjct: 47 SDSLPSTCPSLTKQQRMVGFVSCFVLGYLVSFGSTFALIAGSDNGTKFGITYTLGNIISLCGSGFLVGPKQQVKLMFKPVRRIATIVYLLMIVVVFTVAIAAPELGLVVLLLVLIQCAAAVWYSASYVPYGRKIIAGV 184
BLAST of mRNA_S-ischiensis_contig103.1781.1 vs. uniprot
Match: A0A6A4CF76_9STRA (Vesicle transport protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A4CF76_9STRA) HSP 1 Score: 134 bits (338), Expect = 1.330e-32 Identity = 74/137 (54.01%), Postives = 97/137 (70.80%), Query Frame = 3
Query: 63 DEMCEACPTLTYQQRVIGFVVCVGVGYVFSFLGSMMLIGGGIR--EFAALYVLGSLIALSATGFLIGPKSQCKKMFKPTRRIACIVYLTLLVVVFAVAIAGLPVGLVLILL-IIQCIAAVWYMASYIPYGRKMIKSV 464
D + CP+LT +QR+IGFV C +GY+ SF + LI G +F Y LG++I+L +GFL+GPK Q K MFKP RRIA I+YL ++VVV VAIA +GLV++LL IIQC AAVWY ASY+PYGRK++ S+
Sbjct: 51 DALTSTCPSLTKKQRMIGFVSCFVLGYLVSFGSTFALIAGSDNGTKFGITYTLGNIISLCGSGFLVGPKQQVKLMFKPVRRIATIIYLLMIVVVLTVAIAAPRLGLVVLLLVIIQCGAAVWYSASYVPYGRKILTSI 187
BLAST of mRNA_S-ischiensis_contig103.1781.1 vs. uniprot
Match: A0A3R7HSX0_9STRA (Vesicle transport protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HSX0_9STRA) HSP 1 Score: 132 bits (332), Expect = 8.550e-32 Identity = 70/138 (50.72%), Postives = 99/138 (71.74%), Query Frame = 3
Query: 60 ADEMCEACPTLTYQQRVIGFVVCVGVGYVFSFLGSMMLIGGGIR--EFAALYVLGSLIALSATGFLIGPKSQCKKMFKPTRRIACIVYLTLLVVVFAVAIAGLPVGLVLILLI-IQCIAAVWYMASYIPYGRKMIKSV 464
+D + +CP+LT +QR+IGF C +GY+ SF + LI G +F Y LG++I+L +GFL+GPK Q K MFKP RR+A ++YL ++VVV +VAIA +GLV++LL+ IQ +AAVWY ASYIPYGRK++ S+
Sbjct: 49 SDSLTSSCPSLTKRQRMIGFASCFCLGYLISFGSTFALIAGSDNGAKFGITYSLGNIISLCGSGFLVGPKQQVKLMFKPVRRVATVIYLLMIVVVLSVAIAAPELGLVVLLLVFIQLLAAVWYSASYIPYGRKILASI 186
BLAST of mRNA_S-ischiensis_contig103.1781.1 vs. uniprot
Match: A0A1V9ZRH9_9STRA (Vesicle transport protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZRH9_9STRA) HSP 1 Score: 131 bits (329), Expect = 1.430e-31 Identity = 74/161 (45.96%), Postives = 102/161 (63.35%), Query Frame = 3
Query: 15 SGINIPGITRQEPTFADEMCEACPTLTYQQRVIGFVVCVGVGYVFSFLGSMMLIGGGI--REFAALYVLGSLIALSATGFLIGPKSQCKKMFKPTRRIACIVYLTLLVVVFAVAIAGLPVGL-VLILLIIQCIAAVWYMASYIPYGRKMIKSVCCPCLKDL 488
+ I +PG T + + + C C LT +QR+ GF C +GY+ SF+ + LI G +F LY LG++IAL +GFL+GP Q K M KP RRIA +Y+ ++V+V VAI +GL +L+L+IIQ AAVWY ASYIPYGRKMIK++ C K +
Sbjct: 20 ANIKVPGTTASDSSMEEASC-GCQKLTKKQRMYGFGTCFVLGYIISFVSTFALISGSRDGAKFGILYSLGNVIALCGSGFLVGPAQQIKLMMKPVRRIAAALYVLMIVLVLVVAILAPHLGLLILLLVIIQFCAAVWYSASYIPYGRKMIKTLGSKCFKSM 179
BLAST of mRNA_S-ischiensis_contig103.1781.1 vs. uniprot
Match: A0A0P1A5L8_PLAHL (Vesicle transport protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A5L8_PLAHL) HSP 1 Score: 131 bits (329), Expect = 2.070e-31 Identity = 74/157 (47.13%), Postives = 103/157 (65.61%), Query Frame = 3
Query: 3 TSRTSGINIPGITRQEPTFADEMCEACPTLTYQQRVIGFVVCVGVGYVFSFLGSMMLIGGGIR--EFAALYVLGSLIALSATGFLIGPKSQCKKMFKPTRRIACIVYLTLLVVVFAVAIAGLPVGLVLILLII-QCIAAVWYMASYIPYGRKMIKSV 464
T++TS N + D CP LT +QR+IGF+ C +G++ SF + LI G +F Y LG++I+L +GFL+GPK Q K MFKP RRIA I+YL ++VVV VA+ +GLV++LL+I QC+AAVWY ASYIP+GRK++KS+
Sbjct: 36 TNKTSASNASSL--------DMFNSTCPNLTKKQRMIGFISCFVLGFLVSFGSTFALIVGSDNGTKFGITYSLGNIISLCGSGFLVGPKQQVKLMFKPLRRIATIIYLAMIVVVLVVALTAPQLGLVVLLLVIVQCVAAVWYSASYIPFGRKVLKSI 184 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig103.1781.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig103.1781.1 >prot_S-ischiensis_contig103.1781.1 ID=prot_S-ischiensis_contig103.1781.1|Name=mRNA_S-ischiensis_contig103.1781.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=148bp MCEACPTLTYQQRVIGFVVCVGVGYVFSFLGSMMLIGGGIREFAALYVLGback to top mRNA from alignment at S-ischiensis_contig103:142942..148816- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig103.1781.1 ID=mRNA_S-ischiensis_contig103.1781.1|Name=mRNA_S-ischiensis_contig103.1781.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=5875bp|location=Sequence derived from alignment at S-ischiensis_contig103:142942..148816- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig103:142942..148816- >mRNA_S-ischiensis_contig103.1781.1 ID=mRNA_S-ischiensis_contig103.1781.1|Name=mRNA_S-ischiensis_contig103.1781.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=888bp|location=Sequence derived from alignment at S-ischiensis_contig103:142942..148816- (Schizocladia ischiensis KU_0333)back to top |