mRNA_S-ischiensis_contig102.1764.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig102.1764.1 vs. uniprot
Match: D7FW49_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW49_ECTSI) HSP 1 Score: 704 bits (1816), Expect = 8.580e-244 Identity = 352/533 (66.04%), Postives = 421/533 (78.99%), Query Frame = 3
Query: 486 GGGAKSASDYKCAVHLRGLPWNASNKVLASFLSPISVDDDAIFIVHNTRGEAYVKFTTEEAAEVAVKKDRETIGRRYIEVFQCPVEDMEKARKESDVKGHSDGDYTGVVRMRGLPWSANEGDVKAFFKGLAIEEGGVLLTRNRDGRPSGDAYVVFESEEEAKSALKRDKEKIGQRWIDLFEATRGEVYAVRNTGRGQGGTMRDMADGXXXXXXXXXXXXSAAFDKSDGSYAGVLKMRGLPFDSTKAEIRDFFGDFDLRDSHVFIVTRPDGRPSGEAFVLFHSEADAERALSKDKEKLGDRWVDLFHTNKAALYQRIGVGVQMAAKPDAEYKGVLRLRGLPFSVGVAEIRNFFRDYSMPEHAVYIVNGFDGRPTGEAFVLFESENEAERAH-SLDKEKIGDRWIELFRSTKGDLYQATVRSTHANMDRGGIVHGGEAMTCVKLRGLPFTVTENDIFSFFSGLSVIGSFICKDTMGRPTGEGFVEFSSVEDCQKAMSRNRESMMDRYVEVFAFSKDDVLQQIGAVTGA--GGPRG 2075
GG +Y AVHLRGLPWNAS K L F +P+ V+D I +VHN+RGEAYVK E E A+KKDR TIGRRYIEVF+ +ED+E A + KGH DG Y GVVRMRGLPWSANEGD++ FF G+AIE+ G+ +T NRDGRPSG+AYVVFE+EE AK ALKRDK+KIG+RWID+FEAT+GEVY++ G GG D +FD +D +Y GV++MRGLPF++TK++IR FF ++++S++FIVTRPDG+ SGEAFVLF +EA+AE+AL KDKEKLGDRW+DLF TNK ALYQR+GVGV+MAAKPDAE++GVLR+RGLPF+ GV EIR FFR Y + EH V++VNG D RPTGE++VLF+SE+EAERA +LDK+KIGDRWIELFRSTKGDLY ATVRST M+RGG ++G E MTCVKLRGLPF VTEN+IFSFF GL+VIGSFICKD M RPTGEGFVEF++V+DCQ AMSRNRESMMDRYVEVFA SK+DVLQQIGA A GG RG
Sbjct: 35 GGNGAGKGEYTHAVHLRGLPWNASTKELVDFFAPMDVEDGDIHLVHNSRGEAYVKLKNESDLETALKKDRNTIGRRYIEVFRSSIEDVEHALDDVSSKGHGDGGYKGVVRMRGLPWSANEGDIRNFFDGIAIEKDGIHVTLNRDGRPSGEAYVVFETEEAAKEALKRDKDKIGERWIDIFEATKGEVYSMT----GGGGKKGDQG--------------GVSFDTTDSAYTGVVRMRGLPFEATKSQIRAFFDGINVKESNIFIVTRPDGKASGEAFVLFSTEAEAEKALLKDKEKLGDRWIDLFATNKGALYQRVGVGVKMAAKPDAEFRGVLRMRGLPFASGVEEIRTFFRGYKVQEHGVFVVNGGDWRPTGESYVLFDSEDEAERAFKALDKQKIGDRWIELFRSTKGDLYTATVRSTVLGMERGGAMYGREPMTCVKLRGLPFNVTENNIFSFFEGLTVIGSFICKDVMARPTGEGFVEFATVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIGASGTAANGGNRG 549
BLAST of mRNA_S-ischiensis_contig102.1764.1 vs. uniprot
Match: A0A835Z9Z3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Z3_9STRA) HSP 1 Score: 515 bits (1326), Expect = 5.040e-168 Identity = 280/581 (48.19%), Postives = 361/581 (62.13%), Query Frame = 3
Query: 525 VHLRGLPWNASNKVLASFLSPISVDDDAIFIVHNTRGEAYVKFTTEEAAEVAVKKDRETIGRRYIEVFQCPVEDMEKARKESDVKGHSDGDYTGVVRMRGLPWSANEGDVKAFFKGLAIEEGGVLLTRNRDGRPSGDAYVVFESEEEAKSALK-RDKEKIGQRWIDLFEATRGEVYAVRNTGRGQGGTMRDMADGXXXXXXXXXXXXSAAFDKSDGSYAGVLKMRGLPFDSTKAEIRDFFGDFDLRDSHVFIVTRPDGRPSGEAFVLFHSEADAERALSKDKEKLGDRWVDLFHTNKAALYQRIG-VGVQMAAKPDAEYKGVLRLRGLPFSVGVAEIRNFFRDYSMPEH-AVYIVNGFDGRPTGEAFVLFESENEAERAHSLDKEKIGDRWIELFRSTKGDLYQATVRS----THANMDR--------------GGIVHGGEA------------------------------------------------------MTCVKLRGLPFTVTENDIFSFFSGLSVIGSFICKDTMGRPTGEGFVEFSSVEDCQKAMSRNRESMMDRYVEVFAFSKDDVLQQI 2042
V LRGLPWNA+ K + FL I + D+ ++IVHNTRGEAYVK +E + E +K DR+T+GRRYIEVF ED+E + K +G GV+RMRGLPW+A E D+ +FF G + GGV + +NR+GRPSG+AYVVF SE +A A + RDKEK+G RWIDLFE+T+GE+YA NTGR + D Y GVLKMRGLPFD+TKA+I DFF + + DS VFIV DGRP+G+AFV+F E DA+ AL+ DKEKLG RWVDLF + KAA+Y+R+G V+MA++PDA Y+GVLR+RGLP+S G A+IR+FF DY++ + ++++ G DGRP+GEA+V F +E++A+ A L KEKIGDR+IELF+ TKGDLY AT R THA+ GG V GG + TC KLRGLP+ VTE DIF FF+GL VIG FICKD GRPTGEGFVEF +++ C + ++RNR M++RY+EVFA +KDDVLQ+I
Sbjct: 156 VRLRGLPWNATVKDVTDFLRGIEISDEQVYIVHNTRGEAYVKLHSEASQEACIKCDRKTMGRRYIEVFPASAEDIEASLNVEQPKSSENGAVEGVLRMRGLPWTATEEDILSFFSGFDVRAGGVHIAKNREGRPSGEAYVVFHSELDAHEAKQQRDKEKMGGRWIDLFESTKGEMYA--NTGRSAEERWSEAG---------------GERGAKDLDYRGVLKMRGLPFDATKAQIIDFFHGYGVEDSEVFIVMGRDGRPTGDAFVIFKDETDAKSALNLDKEKLGGRWVDLFPSTKAAVYERVGPTSVEMASRPDASYRGVLRMRGLPYSAGPAQIRDFFGDYAISKSDGIHVITGPDGRPSGEAYVEFANEDDAKHALGLHKEKIGDRYIELFQVTKGDLYTATTRPSYQPTHASATHVLARTMGYRGTGGGGGAVAGGYSGGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXMHALPPPAFGGSAGGTYPANGPPPTCAKLRGLPYQVTEQDIFDFFNGLDVIGIFICKDASGRPTGEGFVEFGTIQHCAQGLNRNRHYMLERYIEVFACTKDDVLQEI 719
BLAST of mRNA_S-ischiensis_contig102.1764.1 vs. uniprot
Match: A0A7S2XYI2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYI2_9STRA) HSP 1 Score: 428 bits (1101), Expect = 4.850e-140 Identity = 210/376 (55.85%), Postives = 273/376 (72.61%), Query Frame = 3
Query: 921 RPSGDAYVVFESEEEAKSALKRDKEKIGQRWIDLFEATRGEVYAVRNTGRGQGGTMRDMADGXXXXXXXXXXXXSAAFDKSDGSYAGVLKMRGLPFDSTKAEIRDFFGDFDLRDSHVFIVTRPDGRPSGEAFVLFHSEADAERALSKDKEKLGDRWVDLFHTNKAALYQRIGVGVQMAAKPDAEYKGVLRLRGLPFSVGVAEIRNFFRDYSMPEHAVYIVNGFDGRPTGEAFVLFESENEAERAHS-LDKEKIGDRWIELFRSTKGDLYQATVRSTHANMDRGGIVHGGEAMTCVKLRGLPFTVTENDIFSFFSGLSVIGSFICKDTMGRPTGEGFVEFSSVEDCQKAMSRNRESMMDRYVEVFAFSKDDVLQQIG 2045
RPSGDA+VVF S E A+ A+K+DKE++G RWIDLF+ T+ E+Y V++T RG G + D YAGV++MRGLPF+++K +IR FF + + D ++F+V RPDG+PSG+AFV+F SE DA+ AL DK+++G RWVDLF TNKA LYQR+GV V+MA +PD+ YKGV+++RGLP+SVGV +IR+F ++ + H VYI+NG DGRPTGEAF + ++E++A A + LDKE++G+RW+E+F +K +LY AT S M V G MTCVKLRGLPF V EN IF+FF GLSVIG FIC+D GR TGEGF EFSS+E+CQ+AMSRNRE M+DRYVEVFA SKDDVL QIG
Sbjct: 1 RPSGDAFVVFCSVEHARKAMKKDKERMGNRWIDLFDTTKAELYGVQSTARGFGPAQIQQTE-------------------IDADYAGVIRMRGLPFEASKEDIRHFFSGYRIVDQNIFVVNRPDGKPSGDAFVIFGSEGDAKGALELDKKQMGSRWVDLFLTNKAELYQRVGVAVRMADRPDSNYKGVVKMRGLPYSVGVNDIRSFLSNFKVEPHGVYIINGPDGRPTGEAFTVMQTEDDAAAAKAKLDKERLGNRWVEMFVVSKAELYTATAHSPIVGMQGQNAVFGSTGMTCVKLRGLPFKVDENMIFTFFEGLSVIGIFICRDLGGRATGEGFCEFSSMEECQQAMSRNREVMVDRYVEVFACSKDDVLAQIG 357
BLAST of mRNA_S-ischiensis_contig102.1764.1 vs. uniprot
Match: A0A7S2SQA4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQA4_9STRA) HSP 1 Score: 429 bits (1103), Expect = 4.200e-137 Identity = 236/555 (42.52%), Postives = 329/555 (59.28%), Query Frame = 3
Query: 465 PASTVVEGGGAKSASDYKCAVHLRGLPWNASNKVLASFLSP--ISVDDDAIFIVHNTRGEAYVKFTTEEAAEVAVKKDRETIGRRYIEVFQCPVEDMEKARKESDVKGHSDGDYTGVVRMRGLPWSANEGDVKAFFKGLAIEEGGVLLTRNRDGRPSGDAYVVFESEEEAKSALKRDKEKIGQRWIDLFEATRGEVYAVRNTGRGQGGTMRDMADGXXXXXXXXXXXXSAAFDKSDGSYAGVLKMRGLPFDSTKAEIRDFFGDFDLRDSHVFIVTRPDGRPSGEAFVLFHSEADAERALSKDKEKLGDRWVDLFHTNKAALYQRIGVGVQMAA-KPDAEYKGVLRLRGLPFSVGVAEIRNFFRDYSMPEHAVYIVNGFDGRPTGEAFVLFESENEAERAHSLDKEKIGDRWIELFRSTKGDLYQATVRSTHANM--DRGGIVHGGEAMTCVKLRGLPFTVTENDIFSFFSGLSVIGSFICKDTMGRPTGEGFVEFSSVEDCQKAMSRNRESMMDRYVEVFAFSKDDVLQQIGAVTGAGGPRGXXXXXXXGSYGMG 2114
PA+ VV +D+ AV LRGLPWN+ + +F S +++ +AI ++H GEA+V+F T + A+ +R+ IG RY+EVF D A + S +G +D D+ GVVR+RGLP+SA ++ FF + E GV ++ NR GRP+G+AYVVFE+E++ + A+K+DK+++G RW+D++ +T+G +YAV+N + D+ +G D V++MRGLPF + K I DFF F L + + VT GRPSGEAFVLF +E +A RAL KDKEKL +RW+DLF ++K L R+GVG A KPDA + ++LRGLPFS V ++R F S+ EH VYI+NG D RPTG+ +V+F SE+EA RA + + + R +E+ + K DLY T+ + DR I + M C +LRGLPF V E DIF FF G+ VIG F+CKD GRPTGE FVEF + Q A+ RNRE + +RYVEVF +K DV+ +I T G G G YG G
Sbjct: 5 PAAEVVAAAVEDPLADHTFAVKLRGLPWNSGKDTVVTFFSEGGLTIAPEAIHLLHTQTGEAFVRFKTAAEKDSALAMNRKNIGTRYVEVFFARASDAAAAARLSMARGQTDADFRGVVRLRGLPFSATAQEIIEFFDECKVAEDGVHISMNRGGRPTGEAYVVFETEDDVEKAVKKDKQRLGARWLDIYPSTKGAMYAVQNV------VLADVDEGV---------------DVVFAEEVHVVRMRGLPFQAIKQNIMDFFAGFPLMEHRIIFVTDLLGRPSGEAFVLFATEDEATRALEKDKEKLSERWIDLFPSSKIELLDRVGVGAAAAVNKPDAAVRNCVKLRGLPFSADVNQVRTFLNGLSIAEHGVYILNGNDSRPTGDGYVVFASEDEAARAAAYNGASLNGRAVEVVQCCKSDLYVDTISCPIRSRPGDRN-IFYSRTPMNCARLRGLPFRVEEKDIFQFFDGVKVIGIFMCKDMHGRPTGEAFVEFEHADGLQLALGRNREVLGERYVEVFPQAKADVVTRIQQFTAGVG--GGYQGGPGGGYGRG 535
BLAST of mRNA_S-ischiensis_contig102.1764.1 vs. uniprot
Match: A0A7S3XQW7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQW7_HETAK) HSP 1 Score: 430 bits (1105), Expect = 6.780e-137 Identity = 245/546 (44.87%), Postives = 321/546 (58.79%), Query Frame = 3
Query: 516 KCAVHLRGLPWNASNKVLASFLSPISVDDDAIFIVHNTRGEAYVKFTTEEAAEVAVKKDRETIGRRYIEVFQCPVEDMEKA-RKESDVKGHSDGDYTGVVRMRGLPWSANEGDVKAFFKGLAIEEG--GVLLTRNRDGRPSGDAYVVFESEEEAKSALKRDKEKIGQRWIDLFEATRGEVYAVRNTGRGQGGTMRDMADGXXXXXXXXXXXXSAAFDKSDGSYAGVLKMRGLPFDSTKAEIRDFFGDFDLRDSHVFIVTRPDGRPSGEAFVLFHSEADAERALSKDKEKLGDRWVDLFHTNKAALYQRIGVGVQMAAKPDAEYKGVLRLRGLPFSVGVAEIRNFFRDYSMPEHAVYIVNGFDGR--PTGEAFVLFESENEAERAH-SLDKEKIGDRWIELFRSTKGDLYQATVRSTHANMDRGGIVHGGEAMTCVKLRGLPFTVTENDIFSFFSGLSVIGSFICKDTMGRPTGEGFVEFSSVEDCQKAMSRNRESMMDRYVEVFAFSKDDVLQQIGAVTGA---GG----PRGXXXXXXXGSYGMG 2114
K AV LRGLPW+ S + +L V + + GEA + + + A +DR +G+RY+EVF ED ++ K + +DGDY GV+R+RGLPWSA+ DV FF GL +E G GV NR+GRPSG+AYVVF S A+ L+RDK+++ RW+DLF AT+ EVYA N + Q A S DGSY GVL++RG+PF+ TK +IR+FFG + L VFIV RPDGR +G+AF +F SE DA A + DK+K+G RWVDLF T KA LYQR G V AA+PD E VLR+RGLPF G A+IR+FFRDY EH VY+V D P GE +V F + AERA +LD++ + R++ELF T+GDLY T S +M ++ + MTCVK+ GLP TV E+ IF FF+G+ VIG FIC+D G TGEGF EF ++ + Q+ SRN+ M DR V + +KDDV+++I GA GG RG G YG G
Sbjct: 120 KYAVWLRGLPWDTSKDAIKEWLGA-GVKVTRVTLRPGNSGEALAEVASRGDQDAARARDRAHMGKRYVEVFPLESEDYKRQLEKFGYTESVTDGDYEGVLRVRGLPWSASAADVLEFFGGLEVEGGEKGVHFIINREGRPSGEAYVVFASAAAAREGLQRDKQRLKGRWLDLFGATKAEVYACENAHKAQAAAFAHAAGAAMPGVPGMEAMPS------DGSYRGVLRLRGIPFEVTKDQIREFFGQWALNSRDVFIVKRPDGRVAGDAFAVFRSEEDARAAQALDKQKIGGRWVDLFPTTKAELYQRCGAAVHAAARPDCEAADVLRVRGLPFQAGPADIRDFFRDYPPVEHGVYVVPALDPLRPPPGEGYVQFADRDAAERARMALDRQSLFGRYLELFLVTRGDLYAGTTFSPVLSMQGPNAIYDIKGMTCVKMIGLPPTVDEDMIFKFFAGVKVIGIFICRDPSGNITGEGFAEFENLTEAQRGSSRNKAQMEDRAVTLLPCAKDDVVREISDPHGARARGGYADQARGYGGYGMPGGYGGG 658
BLAST of mRNA_S-ischiensis_contig102.1764.1 vs. uniprot
Match: A0A4D9D6B4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6B4_9STRA) HSP 1 Score: 374 bits (960), Expect = 1.420e-114 Identity = 220/553 (39.78%), Postives = 313/553 (56.60%), Query Frame = 3
Query: 525 VHLRGLPWNASNKVLASFLSPISVD---DDA--IFIVHNTRGEAYVKFTTEEAAEVAVKKDRETIGRRYIEV------------------FQCPVEDMEKARKESDVKGHSDGDYT----------------GVVRMRGLPWSANEGDVKAFFKGLAIEEGGVLLTRNRDGRPSGDAYVVFESEEEAKSALKRDKEKIGQRWIDLFEATRGEVYAVRNTGRGQGGTMRDMADGXXXXXXXXXXXXSAAFDKSDGSYAGVLKMRGLPFDSTKAEIRDFFGDFDLRDSHVFIVTRPDGRPSGEAFVLFHSEADAERALSKDKEKLGDRWVDLFHTNKAALYQRIGVG-VQMAAKPDAEYKGVLRLRGLPFSVGVAEIRNFFRDYSMPEHAVYIVNGFDGRPTGEAFVLFESENEAERAH-SLDKEKIGDRWIELFRSTKGDLYQATVRSTHANMDRGGI-VHGGEAMTCVKLRGLPFTVTENDIFSFFSGLSVIGSFICKDTMGRPTGEGFVEFSSVEDCQKAMSRNRESMM-----DRYVEVFAFSKDDVLQQI 2042
+ L GLPW S + +FL I V D A I I+ ++ GEA V+ + E E A+K +G+R++++ P + A + G + GD T GVVRMRGLP+SA E D+ AFF G + +GGV + + GR SG AYVVFE+ EA+ ALK DKEKIG+RWIDLF +++ E+ + RG G G S G + V+++RGLPFD T+ +++ FF + +F V R DGR SGEAFV+ HS+ +AL +DK+K+G RW+D+F ++ L+ R+G V + AK D Y GVL++RGLPF V ++ +F Y + V+I G DGRPTGEA+V+FE+ +A A +L+K+ + +RWI+L+ ++KGD+Y +TV S GG V+ MTC +LRG+P TVTE ++F FF GL VIG +IC+D+ GR TGE + EF S++DCQ+AMSRNR+ M DR +EV A SK++VLQ I
Sbjct: 91 LRLSGLPWKCSVADVQNFLKHIGVSTRPDPAADIKILDDSSGEALVRVGSAEEEETALKLKVGRLGKRFVDIGSTTEEAFEATPATSEEAMNAPATVVPDAATATTATGEA-GDGTTGEASSLTVPESSTPQGVVRMRGLPYSATEKDILAFFSGFGVADGGVHMHYDHMGRASGQAYVVFETVPEAQHALKLDKEKIGERWIDLFLSSKPEMLHAVPSMRGYG-----PPGGGGEGWEEGGGIRPGPKGVSIGGISHVIRVRGLPFDCTRMDLQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPQGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFVGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAASKEEVLQLI 637
BLAST of mRNA_S-ischiensis_contig102.1764.1 vs. uniprot
Match: K8Z4P9_NANGC (Rna binding protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z4P9_NANGC) HSP 1 Score: 331 bits (848), Expect = 3.120e-100 Identity = 202/539 (37.48%), Postives = 284/539 (52.69%), Query Frame = 3
Query: 525 VHLRGLPWNASNKVLASFLSPISVD---DDA--IFIVHNTRGEAYVKFTTEEAAEVAVKKDRETIGRRYIEVFQCPVEDMEKARKESDVKGHSD--------------GDYT----------------GVVRMRGLPWSANEGDVKAFFKGLAIEEGGVLLTRNRDGRPSGDAYVVFESEEEAKSALKRDKEKIGQRWIDLFEATRGEVYAVRNTGRGQGGTMRDMADGXXXXXXXXXXXXSAAFDKSDGSYAGVLKMRGLPFDSTKAEIRDFFGDFDLRDSHVFIVTRPDGRPSGEAFVLFHSEADAERALSKDKEKLGDRWVDLFHTNKAALYQRIGVG-VQMAAKPDAEYKGVLRLRGLPFSVGVAEIRNFFRDYSMPEHAVYIVNGFDGRPTGEAFVLFESENEAERAH-SLDKEKIGDRWIELFRSTKGDLYQATVRSTHANMDRGGI-VHGGEAMTCVKLRGLPFTVTENDIFSFFSGLSVIGSFICKDTMGRPTGEGFVEFSSVEDCQKAMSRNRESMM-----DRYVEVFA 2012
+ L GLPW S + +FL I V D A I I+ ++ GEA V+ + E E A+K +G+R++++ E E S+ ++ GD T GVVRMRGLP+SA E D+ AFF G + EGGV + + GR SG AYVVFE+ EA+ ALK DKEKIG+RWIDLF +++ E+ FF + +F V R DGR SGEAFV+ HS+ +AL +DK+K+G RW+D+F ++ L+ R+G V + AK D Y GVL++RGLPF V ++ +F Y + H V+I G DGRPTGEA+V+FE+ +A A +L+K+ + +RWI+L+ ++KGD+Y +TV S GG V+ MTC +LRG+P TVTE ++F FF+GL VIG +IC+D+ GR TGE + EF S++DCQ+AMSRNR+ M DR +EV A
Sbjct: 91 LRLSGLPWKCSVADVQNFLKHIGVSTRPDPAADIKILDDSSGEALVRVGSAEEEETALKLKVGRLGKRFVDIGSTTEEAFEATPATSEEAMNAPATVVPDAATATGEAGDGTAGEASSLTVPESSTPQGVVRMRGLPYSATEKDILAFFSGFGVAEGGVHMHYDHMGRASGQAYVVFETVPEAQHALKLDKEKIGERWIDLFLSSKPEMLHAH-----------------------------------------------------------FFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTA 570
BLAST of mRNA_S-ischiensis_contig102.1764.1 vs. uniprot
Match: W7TED5_9STRA (RNA binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TED5_9STRA) HSP 1 Score: 280 bits (716), Expect = 1.030e-82 Identity = 139/302 (46.03%), Postives = 201/302 (66.56%), Query Frame = 3
Query: 1161 SDGSYAGVLKMRGLPFDSTKAEIRDFFGDFDLRDSHVFIVTRPDGRPSGEAFVLFHSEADAERALSKDKEKLGDRWVDLFHTNKAALYQRIGVG-VQMAAKPDAEYKGVLRLRGLPFSVGVAEIRNFFRDYSMPEHAVYIVNGFDGRPTGEAFVLFESENEAERAH-SLDKEKIGDRWIELFRSTKGDLYQATVRSTHANMDRGGI-VHGGEAMTCVKLRGLPFTVTENDIFSFFSGLSVIGSFICKDTMGRPTGEGFVEFSSVEDCQKAMSRNRESMM-----DRYVEVFAFSKDDVLQQI 2042
S G + V+++RGLPFD T+ +++ FF + +F V R DGR SGEAFV+ HS+ +AL +DK+K+G RW+D+F ++ L+ R+G V + AK D Y GVL++RGLPF V ++ +F Y + H V+I G DGRPTGEA+V+FE+ +A A +L+K+ + +RWI+L+ ++KGD+Y +TV S GG V+ MTC +LRG+P TVTE ++F FF+GL VIG +IC+D+ GR TGE + EF S++DCQ+AMSRNR+ M DR +EV A SK++VLQ I
Sbjct: 15 SIGGISHVIRVRGLPFDCTRMDLQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAASKEEVLQLI 316
BLAST of mRNA_S-ischiensis_contig102.1764.1 vs. uniprot
Match: K8Z4G4_NANGC (Rna binding protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z4G4_NANGC) HSP 1 Score: 241 bits (615), Expect = 9.320e-70 Identity = 115/253 (45.45%), Postives = 169/253 (66.80%), Query Frame = 3
Query: 1224 EIRDFFGDFDLRDSHVFIVTRPDGRPSGEAFVLFHSEADAERALSKDKEKLGDRWVDLFHTNKAALYQRIGVG-VQMAAKPDAEYKGVLRLRGLPFSVGVAEIRNFFRDYSMPEHAVYIVNGFDGRPTGEAFVLFESENEAERAH-SLDKEKIGDRWIELFRSTKGDLYQATVRSTHANMDRGGI-VHGGEAMTCVKLRGLPFTVTENDIFSFFSGLSVIGSFICKDTMGRPTGEGFVEFSSVEDCQKAMSRN 1973
+++ FF + +F V R DGR SGEAFV+ HS+ +AL +DK+K+G RW+D+F ++ L+ R+G V + AK D Y GVL++RGLPF V ++ +F Y + H V+I G DGRPTGEA+V+FE+ +A A +L+K+ + +RWI+L+ ++KGD+Y +TV S GG V+ MTC +LRG+P TVTE ++F FF+GL VIG +IC+D+ GR TGE + EF S++DCQ+AMSR+
Sbjct: 2 DLQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRS 254
BLAST of mRNA_S-ischiensis_contig102.1764.1 vs. uniprot
Match: A0A7S1UID4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UID4_9STRA) HSP 1 Score: 245 bits (625), Expect = 2.200e-68 Identity = 161/452 (35.62%), Postives = 251/452 (55.53%), Query Frame = 3
Query: 525 VHLRGLPWNASNKVLASFLSPISV--DDDAIFIVHNTRGEAYVKFTTEEAAEVAVKKDRETIGRRYIEVFQCPVEDMEKARK--ESDVKGHSDGD------YTGVVRMRGLPWSANEGDVKAFFKGL-AIEEG--GVLLTRNRDGRPSGDAYVVFESEEEAKSALK-RDKEKIGQRWIDLFEATRGEVYAVRNTG-RGQGGTMRDMADGXXXXXXXXXXXXSAAFDKSDGSYAGVLKMRGLPFDSTKAEIRDFF---GDFDLRDSH---VFIVTRPDGRPSGEAFVLFHSEADAERALSK-DKEKLGDRWVDLFHTNKAALYQRIGVG-----------VQMAAKPDAEYKGVLRLRGLPFSVGVAEIRNFFRDYSM--PEHAVYIVNGFDGRPTGEAFVLFESENEAERA-HSLDKEKIGDRWIELFRSTKGDLYQ-ATVRSTHANMDRGG 1769
+ LRGLP++ + + F + + + +D+ I+++ N GEA+V F + A+ ++ IG RYIEV + +++E R+ + D +G+ +GD Y GVVRMRGLPW++ E DV++FF G+ + EG GV + R+ DGR G AY VF +E +A++A+K RD+ ++G R+I+LF+AT+GE+ + RN RG G A DG G+LK++GLP+ +++ +IR+FF G DL V +V + DGR SGEAF +F S A + + ++L RW+ L HTN+ + + G P+A+ VLR+RG+P++ V +I+ FF + M H V I + GRP GEA+ FESE EA RA +LD++K+G R++ELF++TK ++YQ A NM G
Sbjct: 35 IRLRGLPYSTTPDGVKEFFNGLKIVDNDNGIWLLGNGAGEAFVTFVDGTPLDQALAYHKKYIGDRYIEVMRSDPKELESRRRMFKGDARGNGEGDTDDMPNYAGVVRMRGLPWTSTESDVRSFFDGVEGLREGNKGVFICRHPDGRSRGMAYAVFNAEAQAEAAVKARDRHQMGGRYIELFQATKGELNSQRNEAYRGVGRPRVPPA--------------------LDGE--GILKIKGLPWTASQEQIREFFRNHGQADLNGRECLDVVLVVQSDGRSSGEAFAIFDSPITAAKMRDALNGKELDGRWLHLIHTNRQEMVHTVEGGNMGGYGXXXXXXXXXXXPNAQETSVLRMRGIPWTTTVQDIQLFFSGFRMLPMPHGVLICSNPTGRPAGEAYACFESEVEAHRALETLDRQKMGQRYVELFKTTKAEMYQVAEAGGVKQNMQNPG 464 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig102.1764.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig102.1764.1 >prot_S-ischiensis_contig102.1764.1 ID=prot_S-ischiensis_contig102.1764.1|Name=mRNA_S-ischiensis_contig102.1764.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=748bp MSDSEKPEAADPPVDDGGEEEGGDKDEDVEQTFENDGNGHDLGGEDNNEDback to top mRNA from alignment at S-ischiensis_contig102:261492..264081- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig102.1764.1 ID=mRNA_S-ischiensis_contig102.1764.1|Name=mRNA_S-ischiensis_contig102.1764.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2590bp|location=Sequence derived from alignment at S-ischiensis_contig102:261492..264081- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig102:261492..264081- >mRNA_S-ischiensis_contig102.1764.1 ID=mRNA_S-ischiensis_contig102.1764.1|Name=mRNA_S-ischiensis_contig102.1764.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=4488bp|location=Sequence derived from alignment at S-ischiensis_contig102:261492..264081- (Schizocladia ischiensis KU_0333)back to top |