|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 465 |
| Cds size | 462 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815552.0987508-CDS-S-ischiensis_contig102:185642..185822 | 1622815552.0987508-CDS-S-ischiensis_contig102:185642..185822 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig102 185643..185822 + |
| 1695739764.979611-CDS-S-ischiensis_contig102:185642..185822 | 1695739764.979611-CDS-S-ischiensis_contig102:185642..185822 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig102 185643..185822 + |
| 1622815552.1096947-CDS-S-ischiensis_contig102:186513..186591 | 1622815552.1096947-CDS-S-ischiensis_contig102:186513..186591 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig102 186514..186591 + |
| 1695739764.9894788-CDS-S-ischiensis_contig102:186513..186591 | 1695739764.9894788-CDS-S-ischiensis_contig102:186513..186591 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig102 186514..186591 + |
| 1622815552.1192396-CDS-S-ischiensis_contig102:187323..187527 | 1622815552.1192396-CDS-S-ischiensis_contig102:187323..187527 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig102 187324..187527 + |
| 1695739764.9998653-CDS-S-ischiensis_contig102:187323..187527 | 1695739764.9998653-CDS-S-ischiensis_contig102:187323..187527 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig102 187324..187527 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig102.1755.1 >prot_S-ischiensis_contig102.1755.1 ID=prot_S-ischiensis_contig102.1755.1|Name=mRNA_S-ischiensis_contig102.1755.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=154bp
GEVGGGGGEGGGGGGGLAKHWQLLEREKAFLLEPWGLLAPSLEAARRLDE
ALGRLARAVEEHAVRLRHKRDELRASKAAEAMAAAKVSEEDPTHTVHRLL
APRETLRAAAQQEAWEEAARATRHGSAAESAAAASAAAPSSSLPSSSSSP
PPAA back to topmRNA from alignment at S-ischiensis_contig102:185643..187529+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig102.1755.1 ID=mRNA_S-ischiensis_contig102.1755.1|Name=mRNA_S-ischiensis_contig102.1755.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1887bp|location=Sequence derived from alignment at S-ischiensis_contig102:185643..187529+ (Schizocladia ischiensis KU_0333)
GGAGAAGTAGGTGGGGGAGGAGGAGAAGGAGGAGGAGGAGGAGGAGGTCT
TGCAAAGCATTGGCAGCTGTTGGAGAGGGAGAAGGCGTTCTTGCTGGAGC
CGTGGGGGCTGCTGGCGCCCAGCCTGGAGGCAGCGAGGAGGCTGGACGAG
GCGCTGGGTCGCCTGGCCAGGGCCGTCGAGGTATTGTGATGTGATATGAT
GTGGTTTGACGTACTGCAAGCATGTGATGTGATGGTGTGTTGGGAGTGCC
GTTGAGGTATTTTCATGTACGAGTATGATGTGATTTGGTGTAGAGTACTG
CAAGCGTGTGATGTGAAGGGCCGTTGAGGTAATTGTGATGTGTCATATGA
TTTGACGTGCTGCAAGCTTGTGACGTGATATGATGTGATGGTGTGTTTGT
TGGGAACACTCTCGGTCACCTGGCCACGGGGGGCTATATCATCTACTTTG
TATTAACCCTTTTAGTCCCGCTAATTGGACTTACACACTAAAACCCTATG
ACTATACGGACCCCAGGGGTAAAAGGGTTGAGTACTGTAGTATTCCGCCT
CCTCCGGACTACGAAGTAGTTGGTGTTATTCAATGCCGTCTCCTAACTGC
TTGATCGTCGTATACGCAGTATGCGGTTTTCCAACTTGTAGCTGCCGCCT
CTGCCATCTAAGCATCGGTCTCCCCCAAGTACGGTGCTGCTTGAAGAGTT
GACACGAATTATAGATCGAAGCGCACGCTTTTCAAGAGCAGCGGTTCTCC
AAGTGTGTGAAAATTCTTCTGTACTTCTCTTTCAAAGTACTTAGCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCCCCACCACCACCACTCCTCCTGCCC
CCGCGAACCATGATGGTGCAGGAGCACGCAGTGCGACTTCGGCACAAGAG
GGACGAGCTGCGGGCGTCGAAGGCAGCGGAGGCGATGGCCGCCGCGAAGG
TGAGGGAAGGGCGGAGGGAGGGGTACAAGTGGGGCGTTACGGCTAGGGCT
AGGCTGAGGGTCTGGGGTAAGTTAAGACAACCGAGGTGTTCGCTGCCACC
AGGGCGAGGGATGAATGCCGCCTCCTAGCTGCTAGTACTGTTGCCCGTCG
ACTGAAAACACCCCACACATCCCCAAACTATTGTACTACTTTGAAGTGTA
TGTACTCAGTACGTAACTCTTATCTACTTGGGTTGCTGAAAGTACCGCCT
CCTAACTACTGTACCCCGGTGACTGAAAAAATCTCCACACCCCCAAGCTA
CTGTACTTCTGGAACTACTGCATGTACTTCGCTCCAGACTGCTTGGGCTG
CTGAAGTTTCCGCCTCCTATCTACTGTACCCGGTGACCGAAAACACTTGA
TACCCCCAACCGAAAACACTTGATGCCCCCAAACTACAGTACTTCTGTTC
TGGCGAGGTCCCAGCTCTGGGACGGGCGGGGTCCAGAACTCGCTCTCTCG
TGTGCCTTCGACAAAAACATTCGTGCTCGAGCACTCGAGTACTTATCATC
ATCGCCTCACATCACCCCCCCACCCACGCCGCTCGACGAAAATATTCGTA
CTCTACTCGAGTACTTATCACATCGCCTAGTCACATCACCCCCCCACCCG
CGCCGTTCGACAAAAGATTTGTCATACTCGAGTACTTATCACGTCGCCTA
AACACATCACCCCCCCACCCCACGCCGCCAGGTGTCGGAGGAGGACCCGA
CCCACACCGTGCACCGCCTGCTTGCCCCCCGTGAAACCCTGCGGGCCGCC
GCCCAGCAAGAGGCCTGGGAGGAGGCTGCCCGGGCCACCCGACATGGGTC
GGCGGCGGAATCTGCCGCGGCGGCGTCAGCAGCAGCCCCTTCCTCCTCCT
TGCCCTCGTCCTCCTCCTCCCCCCCGCCCGCCGCCGC back to topCoding sequence (CDS) from alignment at S-ischiensis_contig102:185643..187529+ >mRNA_S-ischiensis_contig102.1755.1 ID=mRNA_S-ischiensis_contig102.1755.1|Name=mRNA_S-ischiensis_contig102.1755.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=924bp|location=Sequence derived from alignment at S-ischiensis_contig102:185643..187529+ (Schizocladia ischiensis KU_0333)
GGAGAAGTAGGTGGGGGAGGAGGAGAAGGAGGAGGAGGAGGAGGAGGTCT
TGCAAAGCATTGGCAGCTGTTGGAGAGGGAGAAGGCGTTCTTGCTGGAGC
CGTGGGGGCTGCTGGCGCCCAGCCTGGAGGCAGCGAGGAGGCTGGACGAG
GCGCTGGGTCGCCTGGCCAGGGCCGTCGAGGGAGAAGTAGGTGGGGGAGG
AGGAGAAGGAGGAGGAGGAGGAGGAGGTCTTGCAAAGCATTGGCAGCTGT
TGGAGAGGGAGAAGGCGTTCTTGCTGGAGCCGTGGGGGCTGCTGGCGCCC
AGCCTGGAGGCAGCGAGGAGGCTGGACGAGGCGCTGGGTCGCCTGGCCAG
GGCCGTCGAGGAGCACGCAGTGCGACTTCGGCACAAGAGGGACGAGCTGC
GGGCGTCGAAGGCAGCGGAGGCGATGGCCGCCGCGAAGGAGCACGCAGTG
CGACTTCGGCACAAGAGGGACGAGCTGCGGGCGTCGAAGGCAGCGGAGGC
GATGGCCGCCGCGAAGGTGTCGGAGGAGGACCCGACCCACACCGTGCACC
GCCTGCTTGCCCCCCGTGAAACCCTGCGGGCCGCCGCCCAGCAAGAGGCC
TGGGAGGAGGCTGCCCGGGCCACCCGACATGGGTCGGCGGCGGAATCTGC
CGCGGCGGCGTCAGCAGCAGCCCCTTCCTCCTCCTTGCCCTCGTCCTCCT
CCTCCCCCCCGCCCGCCGCCGTGTCGGAGGAGGACCCGACCCACACCGTG
CACCGCCTGCTTGCCCCCCGTGAAACCCTGCGGGCCGCCGCCCAGCAAGA
GGCCTGGGAGGAGGCTGCCCGGGCCACCCGACATGGGTCGGCGGCGGAAT
CTGCCGCGGCGGCGTCAGCAGCAGCCCCTTCCTCCTCCTTGCCCTCGTCC
TCCTCCTCCCCCCCGCCCGCCGCC back to top
|