mRNA_S-ischiensis_contig102.1736.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig102.1736.1
Unique NamemRNA_S-ischiensis_contig102.1736.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
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BLAST of mRNA_S-ischiensis_contig102.1736.1 vs. uniprot
Match: A0A835Z1E6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1E6_9STRA)

HSP 1 Score: 197 bits (502), Expect = 3.900e-59
Identity = 98/174 (56.32%), Postives = 122/174 (70.11%), Query Frame = 2 
Query:  170 AATALLRALRGLRQGFTYGARIRFPHALVMVALFRRGSAMDKAETIWGLTLEHAKNLAVFAGLYKVLMEALLATKLVPRRHCPLVAGGVAGRLVWAKYSAVNYQVVLYLFSRVTVGLVAWMAREEWEPFASWDFHSAYPHFATAVWALVMWVYENDRDALHPSLVSAMNFLYRD 691
            A  +LLRALRG R GF YG R+RFPHALVM  LF+ G+A+ K +++W LT EH K LA+FAG+YK LME +    ++PR    LVAGG AGRLVWA+Y+AVNYQ+VLYL SRV VG    ++R    P     F   YP+ ATA WA+VM ++END D LHPSL S+M F+Y D
Sbjct:   11 ATESLLRALRGARNGFIYGTRVRFPHALVMALLFKHGNALQKMDSVWSLTFEHGKGLAMFAGIYKGLMELMERCDVLPRNLRALVAGGAAGRLVWARYTAVNYQIVLYLMSRVAVGGAMRLSRGLPAPLRRCSFEGVYPYLATACWAVVMHLFENDADVLHPSLGSSMEFIYHD 184
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BLAST of mRNA_S-ischiensis_contig102.1736.1 vs. uniprot
Match: K3WQH4_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQH4_GLOUD)

HSP 1 Score: 178 bits (451), Expect = 4.300e-51
Identity = 95/207 (45.89%), Postives = 127/207 (61.35%), Query Frame = 2 
Query:  182 LLRALRGLRQGFTYGARIRFPHALVMVALFRRGSAMDKAETIWGLTLEHAKNLAVFAGLYKVLMEALLATKLV-----------PRRHC-PLVAGGVAGRLVWAKYSAVNYQVVLYLFSRVTVGLVAWMAREEWEPFASWDFHSAYPHFATAVWALVMWVYENDRDALHPSLVSAMNFLYRDSHTWEHA-GDFLPSRQACGI-LAAY 760
            +L  LRG+R G  YG +IR PHA VM+ LF+ G+  +K   +  LT EH KNLA+F G+YK ++  L  T++            P  H    VAGGV G LVW KYS VNYQ+V+YL SRV + +V  +A + ++PFA ++F+  YP  AT  WA VMW+YEN+R  LHPSL  +M+FLY +S  W +   DFLPS     + LA Y
Sbjct:    5 VLSILRGVRNGSYYGTKIRAPHAFVMIFLFQNGTLREKLRGVVRLTFEHTKNLALFVGVYKAVLALLRETQVSREGSVSAIVGKPAAHWHAAVAGGVGGYLVWGKYSGVNYQIVMYLMSRVIISVVKVLAAKGYKPFADYNFNKVYPALATVAWASVMWLYENERSTLHPSLSKSMDFLYSESCEWANGVSDFLPSPVTAAVCLATY 211
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BLAST of mRNA_S-ischiensis_contig102.1736.1 vs. uniprot
Match: W2QT77_PHYPN (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2QT77_PHYPN)

HSP 1 Score: 169 bits (429), Expect = 9.640e-48
Identity = 92/205 (44.88%), Postives = 123/205 (60.00%), Query Frame = 2 
Query:  179 ALLRALRGLRQGFTYGARIRFPHALVMVALFRRGSAMDKAETIWGLTLEHAKNLAVFAGLYKVLMEALLA-TKLVPRRHCPL------------VAGGVAGRLVWAKYSAVNYQVVLYLFSRVTVGLVAWMAREEWEPFASWDFHSAYPHFATAVWALVMWVYENDRDALHPSLVSAMNFLYRDSHTWEHA-GDFLPSRQACGIL 751
            ALL  LRGLR G  YG ++R PHALVM+ LF++GS   K   I  LT EH+KNLA+F G+YK ++  L A  +    RH               VAGG+ G LVW +YS+VN+Q+++YL SRV +  V  +A + ++PFA   F   YP  AT VWA VMW+YEN+   LHPSL+ +M FLY +S  W+    +FLPS     + 
Sbjct:    8 ALLAILRGLRNGSFYGTKVRAPHALVMIFLFQKGSIRQKLRGIVRLTFEHSKNLALFVGVYKAVLAVLRAHQEHALGRHVSTGVGKPGAHWHAAVAGGIGGYLVWGRYSSVNFQIIMYLMSRVLISAVRLLAAKGYQPFAQHRFKHVYPLLATVVWASVMWLYENEPHTLHPSLLKSMQFLYDESCRWKDGLVEFLPSPATTAVF 212
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BLAST of mRNA_S-ischiensis_contig102.1736.1 vs. uniprot
Match: A0A8K1CS80_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CS80_PYTOL)

HSP 1 Score: 169 bits (428), Expect = 1.170e-47
Identity = 92/204 (45.10%), Postives = 119/204 (58.33%), Query Frame = 2 
Query:  179 ALLRALRGLRQGFTYGARIRFPHALVMVALFRRGSAMDKAETIWGLTLEHAKNLAVFAGLYKVLMEALLATKLV-----------PRRHC-PLVAGGVAGRLVWAKYSAVNYQVVLYLFSRVTVGLVAWMAREEWEPFASWDFHSAYPHFATAVWALVMWVYENDRDALHPSLVSAMNFLYRDSHTWEHA-GDFLPSRQACGIL 751
            A L  LRG+R G  YG +IR PHA VMV LF+RG+  +K   +  LT EH+KNLA+F G+YK ++  L   K +           P  H    VAG V G L+W +YS VNYQ+ +YLF+RV +G    +A+    PFA   F   YP F TAVWA VMW+YEN+  +LHPSL  +M+FLY +S  W     DFLPS     + 
Sbjct:    4 AALSVLRGVRNGTFYGTKIRAPHAFVMVFLFQRGTLREKLHGVVRLTFEHSKNLALFVGIYKAVLAVLRHHKEMVEGSVTTEVGKPAEHWHAAVAGAVGGYLIWGRYSGVNYQIAMYLFARVIIGAARVLAKRGIYPFAQHKFKDVYPVFVTAVWASVMWLYENEGASLHPSLRKSMDFLYDESCRWSAGVSDFLPSPATAAVF 207
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BLAST of mRNA_S-ischiensis_contig102.1736.1 vs. uniprot
Match: A0A485LD92_9STRA (Aste57867_19463 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LD92_9STRA)

HSP 1 Score: 167 bits (424), Expect = 5.210e-47
Identity = 93/201 (46.27%), Postives = 118/201 (58.71%), Query Frame = 2 
Query:  194 LRGLRQGFTYGARIRFPHALVMVALFRRGSAMDKAETIWGLTLEHAKNLAVFAGLYK-VLMEALLATKLV-------PRRHCPL------VAGGVAGRLVWAKYSAVNYQVVLYLFSRVTVGLVAWMAREEWEPFASWDFHSAYPHFATAVWALVMWVYENDRDALHPSLVSAMNFLYRDSHTWEHAGDFLPSRQACGILA 754
            +R  R G  YG +IR PHA VMV LF+     +K + I  LT EH KNLA F G+YK V++    A ++V       P+   PL      VAG V G LVW+KYS VNYQ+VLYLFSRV +GLV   + + W     + F   YP FA A WA+VMW++E     LHPSL  +M+FLY DS+TW    DFLPS     ++A
Sbjct:   12 VRAFRNGAYYGTKIRAPHAFVMVMLFQNKPLREKLQGIVKLTFEHTKNLAYFVGIYKGVILLLKQADRVVTSSKIGHPQGLNPLAPWHAAVAGAVGGYLVWSKYSGVNYQIVLYLFSRVLIGLVKLASEKGWPIMKDYSFKQVYPVFACATWAIVMWLFEYHGHVLHPSLSKSMDFLYHDSNTWTDIQDFLPSPATVAVVA 212
[Close]
BLAST of mRNA_S-ischiensis_contig102.1736.1 vs. uniprot
Match: W4H1D5_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H1D5_9STRA)

HSP 1 Score: 166 bits (419), Expect = 2.900e-46
Identity = 93/201 (46.27%), Postives = 117/201 (58.21%), Query Frame = 2 
Query:  194 LRGLRQGFTYGARIRFPHALVMVALFRRGSAMDKAETIWGLTLEHAKNLAVFAGLYK-VLMEALLATKLVPRRHC-------PLV------AGGVAGRLVWAKYSAVNYQVVLYLFSRVTVGLVAWMAREEWEPFASWDFHSAYPHFATAVWALVMWVYENDRDALHPSLVSAMNFLYRDSHTWEHAGDFLPSRQACGILA 754
            LR +R G  YG +IR PHA VMV LF++    +K   I  LT EH KNLA F G+YK VL+    A +      C       PLV      AG V G +VW+KYS+VNYQ+VLYLFSRV +GLV   + + W     + F   YP  A A WA+VMW++E  R  LHPSL  +M+FLY DS++W    DFLPS     +LA
Sbjct:   12 LRAIRNGAYYGTKIRAPHAFVMVMLFQQRPLREKLRGIIKLTYEHTKNLAYFVGVYKGVLLLLKEAGRAAGSSSCVLHQGLNPLVPWHAALAGAVGGYVVWSKYSSVNYQIVLYLFSRVLIGLVKLGSEKGWPILKKYSFPQVYPVLACATWAVVMWLFEYHRHVLHPSLAKSMDFLYHDSNSWTTIQDFLPSPATVAVLA 212
[Close]
BLAST of mRNA_S-ischiensis_contig102.1736.1 vs. uniprot
Match: A0A0W8D6I6_PHYNI (Serine/threonine-protein kinase AtPK2/AtPK19 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D6I6_PHYNI)

HSP 1 Score: 170 bits (431), Expect = 4.820e-46
Identity = 98/226 (43.36%), Postives = 133/226 (58.85%), Query Frame = 2 
Query:  119 KTQVVAQGS*ASMSGDAAAT-ALLRALRGLRQGFTYGARIRFPHALVMVALFRRGSAMDKAETIWGLTLEHAKNLAVFAGLYKVLMEALLA-TKLVPRRHCPL------------VAGGVAGRLVWAKYSAVNYQVVLYLFSRVTVGLVAWMAREEWEPFASWDFHSAYPHFATAVWALVMWVYENDRDALHPSLVSAMNFLYRDSHTWEHA-GDFLPSRQACGIL 751
            K+Q   +G+ A +S  A    ALL  LRGLR G  YG ++R PHALVM+ LF++GS   K   I  LT EH+KNLA+F G+YK ++  L A  +    RH               VAGG+ G LVW +YS+VN+Q+++YL SRV +  V  +A + ++PFA   F   YP  AT VWA VMW+YEN+   LHPSL+ +M FLY +S  W+    +FLPS     + 
Sbjct:  161 KSQHNGRGNRAPVSEKATMQEALLAILRGLRNGSFYGTKVRAPHALVMIFLFQKGSIRQKLRGIVRLTFEHSKNLALFVGVYKAVLAVLRAHQEHALGRHVSTGVGKPGAHWHAAVAGGIGGYLVWGRYSSVNFQIIMYLMSRVLISAVRLLAAKGYQPFAQHRFKHVYPLLATVVWASVMWLYENEPHTLHPSLLKSMQFLYDESCRWKDGLVEFLPSPATTAVF 386
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BLAST of mRNA_S-ischiensis_contig102.1736.1 vs. uniprot
Match: A0A2P4XUB9_9STRA (CMGC/CDK protein Kinase n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XUB9_9STRA)

HSP 1 Score: 170 bits (431), Expect = 5.280e-46
Identity = 87/204 (42.65%), Postives = 124/204 (60.78%), Query Frame = 2 
Query:  179 ALLRALRGLRQGFTYGARIRFPHALVMVALFRRGSAMDKAETIWGLTLEHAKNLAVFAGLYKVLMEALLATKLVPRRHCPL------------VAGGVAGRLVWAKYSAVNYQVVLYLFSRVTVGLVAWMAREEWEPFASWDFHSAYPHFATAVWALVMWVYENDRDALHPSLVSAMNFLYRDSHTWEHA-GDFLPSRQACGIL 751
            ALL  LRG+R G  YG ++R PHA+VM+ LF++GS   K   +  LT EH+KNLA+F G+YK ++  L A +    +H               VAGG+ G LVW +YS+VN+Q+++YL SRV + +V  +A + ++PF  + F   YP  AT VWA VMW+YEN+   LHPSL+ +M FLY +S  W+    +FLPS     + 
Sbjct:  187 ALLAILRGVRNGSFYGTKVRAPHAMVMIFLFQKGSIRQKLRGVVRLTFEHSKNLALFVGVYKSVLAVLRAHQQTLGQHVTTDVGKPGVHWHAAVAGGIGGYLVWGRYSSVNFQIIMYLMSRVLISVVRVLAAKGYQPFVQYRFKHVYPMLATVVWASVMWLYENEPHTLHPSLLKSMQFLYDESCRWKDGLVEFLPSPATTAVF 390
[Close]
BLAST of mRNA_S-ischiensis_contig102.1736.1 vs. uniprot
Match: A0A484E793_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E793_BRELC)

HSP 1 Score: 164 bits (414), Expect = 1.470e-45
Identity = 85/205 (41.46%), Postives = 123/205 (60.00%), Query Frame = 2 
Query:  179 ALLRALRGLRQGFTYGARIRFPHALVMVALFRRGSAMDKAETIWGLTLEHAKNLAVFAGLYKVLMEALLATKL------------VPRRHC-PLVAGGVAGRLVWAKYSAVNYQVVLYLFSRVTVGLVAWMAREEWEPFASWDFHSAYPHFATAVWALVMWVYENDRDALHPSLVSAMNFLYRDSHTWEHAG-DFLPSRQACGIL 751
            ALL  LRG R G  YG ++R PHA+VM+ LF++GS   K   +  LT EH+KNLA F G+YK+++  L   K              P  H    VAGG+ G +VW +YS+VN+Q+V+YL SRV + ++  +A + ++PFA   F   YP  AT +WA VMW+YEN+   LHPSL+ +M +LY +S +W+    + LPS     ++
Sbjct:    4 ALLTILRGARNGLLYGTKVRAPHAMVMIFLFQKGSIRQKLREVVHLTYEHSKNLAFFVGIYKLVLAMLRLHKEHALKQYVGVGIGKPSAHWHAAVAGGIGGYMVWGRYSSVNFQIVMYLMSRVIISIMRTLAAKGFQPFAQHQFKHVYPMLATVMWASVMWLYENEPRTLHPSLLKSMQYLYDESCSWKDGLIELLPSPTTTAVI 208
[Close]
BLAST of mRNA_S-ischiensis_contig102.1736.1 vs. uniprot
Match: A0A024UNV5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UNV5_9STRA)

HSP 1 Score: 163 bits (412), Expect = 3.290e-45
Identity = 90/202 (44.55%), Postives = 119/202 (58.91%), Query Frame = 2 
Query:  194 LRGLRQGFTYGARIRFPHALVMVALFRRGSAMDKAETIWGLTLEHAKNLAVFAGLYKVLMEAL--------LATKLVPRRHC-PLV------AGGVAGRLVWAKYSAVNYQVVLYLFSRVTVGLVAWMAREEWEPFASWDFHSAYPHFATAVWALVMWVYENDRDALHPSLVSAMNFLYRDSHTWEHAGDFLPSRQACGILA 754
            +R +R G  YG +IR PHA VMV LF++    +K   I  LT EH KNLA F G+YK ++  L        L++  V R+   PL+      AG V G +VW+KYS VNYQ+VLYLFSRV +GLV   + + W     + F   YP  A   WA+VMW++E  R+ LHPSL  +M+FLY DS++W    DFLPS     +LA
Sbjct:   12 MRAVRNGAYYGTKIRAPHAFVMVMLFQQKPLREKLRGIVQLTFEHTKNLAYFVGVYKGVLLLLREADRAVGLSSACVLRQGLNPLLPWHAAFAGAVGGYIVWSKYSGVNYQIVLYLFSRVLIGLVKLGSEKGWPIVKKYSFQEVYPALACVTWAIVMWLFEYHRNVLHPSLSKSMDFLYHDSNSWTTIQDFLPSPATVAVLA 213
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig102.1736.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z1E6_9STRA3.900e-5956.32Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
K3WQH4_GLOUD4.300e-5145.89Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
W2QT77_PHYPN9.640e-4844.88Uncharacterized protein n=9 Tax=Phytophthora TaxID... [more]
A0A8K1CS80_PYTOL1.170e-4745.10Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A485LD92_9STRA5.210e-4746.27Aste57867_19463 protein n=1 Tax=Aphanomyces stella... [more]
W4H1D5_9STRA2.900e-4646.27Uncharacterized protein n=5 Tax=Aphanomyces astaci... [more]
A0A0W8D6I6_PHYNI4.820e-4643.36Serine/threonine-protein kinase AtPK2/AtPK19 n=1 T... [more]
A0A2P4XUB9_9STRA5.280e-4642.65CMGC/CDK protein Kinase n=2 Tax=Phytophthora palmi... [more]
A0A484E793_BRELC1.470e-4541.46Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A024UNV5_9STRA3.290e-4544.55Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig102contigS-ischiensis_contig102:54958..61308 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons6
Model size1039
Cds size870
Stop1
Start0
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815551.7798586-UTR-S-ischiensis_contig102:54957..551241622815551.7798586-UTR-S-ischiensis_contig102:54957..55124Schizocladia ischiensis KU_0333UTRS-ischiensis_contig102 54958..55124 -
1695739764.8073559-UTR-S-ischiensis_contig102:54957..551241695739764.8073559-UTR-S-ischiensis_contig102:54957..55124Schizocladia ischiensis KU_0333UTRS-ischiensis_contig102 54958..55124 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815551.7956018-CDS-S-ischiensis_contig102:55124..553731622815551.7956018-CDS-S-ischiensis_contig102:55124..55373Schizocladia ischiensis KU_0333CDSS-ischiensis_contig102 55125..55373 -
1695739764.8165002-CDS-S-ischiensis_contig102:55124..553731695739764.8165002-CDS-S-ischiensis_contig102:55124..55373Schizocladia ischiensis KU_0333CDSS-ischiensis_contig102 55125..55373 -
1622815551.8078575-CDS-S-ischiensis_contig102:57470..576101622815551.8078575-CDS-S-ischiensis_contig102:57470..57610Schizocladia ischiensis KU_0333CDSS-ischiensis_contig102 57471..57610 -
1695739764.8285735-CDS-S-ischiensis_contig102:57470..576101695739764.8285735-CDS-S-ischiensis_contig102:57470..57610Schizocladia ischiensis KU_0333CDSS-ischiensis_contig102 57471..57610 -
1622815551.8239806-CDS-S-ischiensis_contig102:59020..591491622815551.8239806-CDS-S-ischiensis_contig102:59020..59149Schizocladia ischiensis KU_0333CDSS-ischiensis_contig102 59021..59149 -
1695739764.8374949-CDS-S-ischiensis_contig102:59020..591491695739764.8374949-CDS-S-ischiensis_contig102:59020..59149Schizocladia ischiensis KU_0333CDSS-ischiensis_contig102 59021..59149 -
1622815551.8366559-CDS-S-ischiensis_contig102:59565..596691622815551.8366559-CDS-S-ischiensis_contig102:59565..59669Schizocladia ischiensis KU_0333CDSS-ischiensis_contig102 59566..59669 -
1695739764.847584-CDS-S-ischiensis_contig102:59565..596691695739764.847584-CDS-S-ischiensis_contig102:59565..59669Schizocladia ischiensis KU_0333CDSS-ischiensis_contig102 59566..59669 -
1622815551.8502047-CDS-S-ischiensis_contig102:60854..608901622815551.8502047-CDS-S-ischiensis_contig102:60854..60890Schizocladia ischiensis KU_0333CDSS-ischiensis_contig102 60855..60890 -
1695739764.8577092-CDS-S-ischiensis_contig102:60854..608901695739764.8577092-CDS-S-ischiensis_contig102:60854..60890Schizocladia ischiensis KU_0333CDSS-ischiensis_contig102 60855..60890 -
1622815551.864597-CDS-S-ischiensis_contig102:61096..613081622815551.864597-CDS-S-ischiensis_contig102:61096..61308Schizocladia ischiensis KU_0333CDSS-ischiensis_contig102 61097..61308 -
1695739764.8737009-CDS-S-ischiensis_contig102:61096..613081695739764.8737009-CDS-S-ischiensis_contig102:61096..61308Schizocladia ischiensis KU_0333CDSS-ischiensis_contig102 61097..61308 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig102.1736.1prot_S-ischiensis_contig102.1736.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig102 55125..61308 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig102.1736.1

>prot_S-ischiensis_contig102.1736.1 ID=prot_S-ischiensis_contig102.1736.1|Name=mRNA_S-ischiensis_contig102.1736.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=290bp
QELRRDCALLEGPPCSEGQWAGRGAVGVIKVSEGAASLKKDTGGGSRLMS
KHEWGCRRHSAPARVAGPATRVHVRRPDSVPPRPGYGGAVPTGVGHGQSG
DHLGADLGARQEPRRVRGFVQGAHGGVASHKAGPAAALPPGCRRCGGEAG
LGQVFRCQLSGGALPVLAGDGGAGGLDGQGGVGAVCVLGLSLRVPPLCHC
RLGARHVGVRERPGRPAPVPRIRHELPLPRLAHLGARRGFPALPTGVRYP
GRLRHLRIRHVGDGGEASPQPAGAAGAAITATAAAGPGW*
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mRNA from alignment at S-ischiensis_contig102:54958..61308-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig102.1736.1 ID=mRNA_S-ischiensis_contig102.1736.1|Name=mRNA_S-ischiensis_contig102.1736.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=6351bp|location=Sequence derived from alignment at S-ischiensis_contig102:54958..61308- (Schizocladia ischiensis KU_0333)
CAGGAGTTGCGGCGGGACTGCGCCCTGCTTGAAGGTCCGCCTTGCAGCGA
GGGACAGTGGGCAGGGCGCGGCGCTGTTGGAGTAATCAAGGTGTCTGAAG
GTGCCGCTTCATTGAAAAAAGACACAGGTGGTGGCTCAAGGCTCATGAGC
AAGCATGAGTGGGGATGCCGCCGCCACAGCGCTCCTGCGCGCGTTGCGGG
GCCTGCGACAAGGTTCGTGCTTGGGTGCGTCTCCATATTGCTCTGGGGGG
GATATATACACAGCACCCCCTTTTGGGCGCTCTGCACTATGTTGCACACG
ATGCACGGCTCATGCCTTGGGGGAGGGAAAGCTCAATCTCTCAACCACAA
CCCAGACGTTGCATAGCTGACCCGCCCCGTCCGACGCCCCCCTCCCCCTT
CCCCGCCCCTTTGCCCAGGGTTCACGTACGGCGCCCGGATTCGGTTCCCC
CACGGTGAGCTCCCCGCCATCAGCCTTTGGAGTACGACGGGACACCGATG
TGATGTGATGTGATGTGATATGACATGCGCTCAAATTTCTGAGGATGAGT
ATTGTAACAACCAAGTACTTTGTAGTTAGGAGAACAGCCTCGAAATAACT
AGGCAATCGTCGTTTGCCTTCTCGGTTATTATCAAGTATGTAGTGAACCC
TTCCCACCCCCCAAAAAAAATCGTTGGATGACAAACTCCGGCAAAGTTTA
GTACTTCGAAGTATTTAAAATCGACCCACGCAGCTGGGCGTGTTGGAAAA
TTAACAATACTACATACTCTAAAAAGAATGGCAACAAAAAATTATTAACT
GCTGTACTTGTAGTTCCTTTTGCGTTAAAAACCCAACCCCGATCCCGACC
TTCTCCCCTCGCCCCCACCCCCCCCGACCATCCCTGTCGAAGTGATGGCA
GTAGATACAAGTACTGCAGCGCTCTTCCGGTGGGGCGAGGGGCAAGGGGG
GGGGAGGGGGGGGGGGGCAGAGAAAGCCCAACCCAACCCTGAAGTGAACC
CTAGCCCCCAACCGCTAAGCCTTAAGGAATGCAGGGCCCCAAGCATAGCT
CTTACCCCTTCTGCCCCTGGCAAATTGGACTTACACACTAAAACCCTATG
ATTATTCGGACCCCAGGGGTAAAAGGGTTAACATCCCCCCGCTCGTTGCT
TAACTCCCCGACAAGGAGGGGTTGGCTGTAAGTAGCCAGCCTCCCCAACA
ACAGAGGACACAATGCTGCGTCCCGTGGGGTCACCCCTGTGATGTTGATG
TGATGTGATGTGAAGTCAAACTACAGCACTTTAGAGTGCACATCACGTCA
CATCACATCATTTCACATCACATCCCGTACGGTCACCCCTGTGGGACACC
GGGGTGGTCAATGGCCACAACTTATGGCTATGGCAGGCAGTCCATGAACG
ACCCTGATATTTGCACCTACGAATATGTATATATATATATATATATATTA
CGTAGTATATATACATGCTCGTATGTACTCACGTTGCGCTTGCCGTAGTC
CCGAGACCGTTGACCATACGTAGGTGTACGAAATCCCGCACACCTGCAAA
CGACTCCCACTAAACACGAGTGGTTCTACAAACGTCTCCTCAGTCGAAAA
TGCCTGGCTCGGTGACATGAATGCCCCCCCCCCCCCCAGCCCTGGTTATG
GTGGCGCTGTTCCGACGGGGGTCGGCCATGGACAAAGCGGAGACCATCTG
GGGGCTGACCTTGGAGCACGCCAAGAACCTCGCCGTGTTCGCGGTGAGTG
TGTGTGCTTTTGTGTGGCACGGCTCTCTTTCTCTTTCTCCCCCTGCCCGA
ACTATTGTACCGTGTGCGTGCACTACTGCGTGGAAGGGCCACTGTTGAGG
TGGTTTGATGTGATGTGATGTCAGCAGTACCCCCGCTGCTACACCACCGC
CGCCGCCGTTGCTGCACCACCACTACCAACACCGCTGCCACCACCAATTG
ACTCGGCCGTACGTTTACAAACGATACAAAGAATGCCATTGTTTGCTGCG
GTGCGGGCCCCCGTGCAGGGTTTGTGCAAGGTGCTCATGGAGGCGTTGCG
GGCCACAAAGCTGGTCCCACTCTTTAGTGACGTGGTCTGATGTGATGTCA
CACTACTGAACTTAGAGTACGAACCGCATCACATCACATCACATCACTGC
CACGGGCAGGGTTTGTACAAGGTGCTCATGGAGGCGTTGCTAGCCACAAA
GCTGGTCCCGCGGCGGCACTGCCCCCTGGTTGCCGGCGGTGTGGCGGGGA
GGCTGGTCTGGGCCAAGTATTCCGCTGTCAACTATCAGGTGGGCCCGTTT
ACTTCATTCTTAGCAGCACAGTACTGCAGTACGTCTACTACTCCTGGAAG
TACGAGTAATACGGAGGTGCACGACCTACTATGATATATATATATATATA
TATCGTGTGGCGGGGAGGCTGGTCTGGGCCAAGTACTCCGCTTTCAACTA
CCAGGTGGGCCAATTTACTACTTCGAAGTACAGTAGAGCTCTACTGCAGT
ACGTCTACGAGTAGTACAGAGGTGCTCGACCTACTCTGTATTATTTAGCA
GCACATTACTGCAGTACGTCTACGAGTAATACAGAGATGCTCGACCTACT
ATATAGTACTCCGCTGTCAAGTATCAGGTGGGCCCATTTAGCGGAACAGT
ACTTGGTACAATACCTATGAGAAATACAGAGGTGCTCGACCTACTATGTA
GTACTCCGCTGTAAACTATCAGGTGGGCCCATTTAGCCGCACAGTACTGT
AGTACATCTACGAGTAATACAGAGGTGCTCGGCCTACTATATAGTACTTC
CGGCAGTATTCCGCTGTCTGCTATCAGGTGGGCCCATTTAGCAGAACAGT
GCTGTAGAGTAGTACGTCTACGAGAAATACAGAGGTGCTCGACCTACTGT
ATAGTACTTCGAAGTACTTCGAATCATTTCTCGCTGTCAACTATCAGGTG
GGCCCATTTAGCAGCACAGTGCTCTCACCCACCTCCCCCTCCTCCTTTTC
TCCCCCTCCCCACACAAACCCTGCCGAGCTATAAGGAAGGGCCACTGCTG
AGGTCTTTAGTGACGTGGCCTGCACCTCGCCCTGTGTTGTTCCTGTTAAT
ACTGCAGTAGGCCCATGAGTAATACAGAGGTGCTCGACCTAAGGTATACT
TGGTATATAAAGTACTACGAACAGTGGTATGTACTTATTAGCTTGTCTTG
CGACATAACCTTGCGTGCAATGCCGACAGCCCTAAGTCGAAACATCGGGT
TGGCCCTGTATCCAAGAATAACCGCCGGATGGATGCAGGTGGTGCTCTAC
CTGTTCTCGCGGATGACGGTGGGGCTGGTGTGACAACCACTATTGCGAGA
ACACTCAATCTCATACACGTGCGATTGTTCCTCACAACGATTTGTATGAA
TCAGAGCAACAAACGGTACAATTTCTATGAATCGCAGGTGGTGCTGTACC
TCTTCTCGCGTGTGACGGCGGGGCTGGTGTGATAACCACTACTACGAGAA
CGCTCAATATCACACACGTGCGATTTCTCATAACCATTTTTAAATTTGTT
TGATGAATGCGAGTTCCGGGCCCCGTCCCAACAACCTAAGGTGGGGACCT
CACCAGAAGCCCTTCTTTTCACCCGCAGGGCACAAAGATCACGAAAAGAA
CGATTTGTATGCATCAAAGCAACAAACGTTACAAAATATGAATCACAGGT
GGTGCTCTACCTGTTCTCGCGGGTGACGGTGGGGCTGGTGGCCTGGATGG
CCAGGGAGGAGTGGGAGCCGTTTGCGTCCTGGGACTTTCACTCCGCGTAC
CCCCACTTTGCCACTGCCGTCTGGGCGCTCGTCATGTGGTGAGTCAAGTG
TATGATGTGCTGTGATGTGATGTCAAACTACAGTATACAAGAGTGCACAT
CACATCACATCACATCACATCACATCAGGAGTGGGAGCCCTTTGCCTCTT
GGGACTTTCACTCCACATACCCCCACTTTGCCACCGCCGTCTGGGCCCTC
ATCATGTGGTGAGATCCCAATTTCGATGTGATGTGATGTGATGTGATGTC
AAACTACAGTAAATCGGAGTACGCATCACATCACTTGACACCGCGTGTGA
TGTGATGTGATGTCAAACTACTCGAGTACTCTGCAGTAAATCGGAGTATG
CATCACAGCACATCACACTAGATCACAGCCTGTGATCGTCGGAGAGTTGA
AGATCTTGAATGTGATGTCAAACTACAGTAAATTAGAGTGCACATCGCAT
CACATTGCATCACACCAGGAGTGGGAGCCCTTTGCCTCCTGGGCTTCCAC
TCTGCGTACCCCCACTTTGCCACCGCCGTATGGGCGCTCGTCATGTGGTG
AGACCCCAATTTCGATGTGATGTGATGTCAAACTACAGTAAATTAAAGTA
CGCATCACATCACATCACACCACATCACACACTGAAATTGTCAGAGGGCT
AAAGATCTTGATGTGATGTGATGTCAAACCACAGTAAATTAGAGTACTCG
AGTACATATCACATCACATTGCGCCAGGAGCGGGAGCCCTTCTCCCCCTG
GGACTTGCACTCCGCGTACCCCTGCTTTGCCACCGTAAATGCTCAAGACT
ATGGCAAGCACTATGAGACTTTGGCGCTGTACGTCAATTGCCCGAGACTA
TGTCAAGCACAGCCCGAGTACAGTATATAAGCAGTACCGTAATCGGCGGG
ACAATTTTCGGGAGAATATTTCTCGCCGCACAGGTCCTAGTTATCCCGAA
ATCTCTCGGACAAATACCTCCAGGTCCTGAGGGCATTTTTCCGAGTTTTC
CCGCGCGAATCCGGCCAGTACTCGGCGAGAAAAGTTCTGCCGAAAATTGG
CATGGGGGGGCAAGATCTCTCTGACGATTACGGTACTTCGTATACTTGGC
AGTATACCACGGCAGACCGGTGGTTTCGGGCCACCCAGAAACATGCGCGC
GCGCCCGCCCCACCCAGTCATCCACCCCCTCGCATCACCCCCCCCCCCGG
CCCCCCACCACCGCGCCCGCCCGCCGCAGGGCAGTGATGGAATGTCTAAG
CAAATCAAGCTGTTTATCGACAGCACTGATCTATTTTGAGTGGTAGATGC
GCGGCGAGCTCCAGGCCCCGTGCCAAAAGGCTCGTCCCAAAACAGGACTC
AACGAAGCCCTTCTTCCCCTCTCAGAACAACAAAACATAAAGATCTATAT
ATCTATCAATAGTTGATATTCGATAGTTTGACCCACACTAGATCCAAGTA
CTTGAAGTACTTCGTAGTTGGTAACGCCACCCACAAACTCGCAGAAAGAA
GGATCACCTCTATTCCCCACTCGCTTCTTTTCTTTCCACACAAAAAAATC
AGTCGGGCCCGACAAATGTATCTAGTGATCGATACTCCATCATTGGTGCC
CGCCCGCCGCAGGGTGTACGAGAACGACCGGGACGCCCTGCACCCGTCCC
TCGCCTCCGATAGCTATCTACTGATTGATATTCCCTCACTTCCCGCCGCA
GGGTGTACGAGAACGACCGGGACGCCCTGCACCCCTCGCTCGTCTCCGCC
ATGAACTTCCTCTCCAAAGACTCACACTATGGCTAAGCAAAACAACCTGT
TTATCGACAGCACTTATCTACTTCGAGGTATATATCTACCGATAGTCGAT
ATGCGATAGTTTGACCCACACTAAATCCAAGTATTTTAAGAGACAACACG
GGGCGAGGTGCGGGCCACGTCACTAGAGACCTCAACAGTGGTAATGATGT
GATGTGATGTGATGTGTTTGTATTCTAATGTTCAGTAGTTTGACATCACA
TCAATTCACATGAAACCACGTCACTAGAGACCTCAACAAAGTACTTTGTA
CTCTAGTGGGTAGCACCGCCCACAAAATCAGTTGAGCCCATTAGGTATCC
ACAGATCGATACTCCATCGCTGCCCGCCATCGCAGGGTGTACGAGAACGA
CCGGGACGCCCTGCACCCGTCCCTCGTATCCGCCATGAACTTCCTCTACC
GCGACTCGCACACCTGGGAGCACGCCGGGGATTTCCTGCCCTCCCGACAG
GCGTGCGGTATCCTGGCCGCCTACGCCATCTACGCATCCGTCACGTGGGC
GACGGGGGCGAAGCGTCGCCCCAGCCCGCCGGGGCCGCCGGGGCTGCCAT
CACTGCCACCGCCGCCGCCGGGCCCGGGTGGTAACTTACCCTCCTCGTGA
GCCCCGGGGCTGCGGGCCCGGCTCGCCGCTGGGCCCGGCGGCGGCGGGTT
GGCGGCCTCCAGTGATGGAATATCTAAGCAAGTCAAGCTATTTATCGACA
GTACTGATATAGAGTAGTGTATACGTCCGGAAGTATGAGGCATTTGACCT
T
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Coding sequence (CDS) from alignment at S-ischiensis_contig102:54958..61308-

>mRNA_S-ischiensis_contig102.1736.1 ID=mRNA_S-ischiensis_contig102.1736.1|Name=mRNA_S-ischiensis_contig102.1736.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1740bp|location=Sequence derived from alignment at S-ischiensis_contig102:54958..61308- (Schizocladia ischiensis KU_0333)
CAGGAGTTGCGGCGGGACTGCGCCCTGCTTGAAGGTCCGCCTTGCAGCGA
GGGACAGTGGGCAGGGCGCGGCGCTGTTGGAGTAATCAAGGTGTCTGAAG
GTGCCGCTTCATTGAAAAAAGACACAGGTGGTGGCTCAAGGCTCATGAGC
AAGCATGAGTGGGGATGCCGCCGCCACAGCGCTCCTGCGCGCGTTGCGGG
GCCTGCGACAAGCAGGAGTTGCGGCGGGACTGCGCCCTGCTTGAAGGTCC
GCCTTGCAGCGAGGGACAGTGGGCAGGGCGCGGCGCTGTTGGAGTAATCA
AGGTGTCTGAAGGTGCCGCTTCATTGAAAAAAGACACAGGTGGTGGCTCA
AGGCTCATGAGCAAGCATGAGTGGGGATGCCGCCGCCACAGCGCTCCTGC
GCGCGTTGCGGGGCCTGCGACAAGGGTTCACGTACGGCGCCCGGATTCGG
TTCCCCCACGGGTTCACGTACGGCGCCCGGATTCGGTTCCCCCACGCCCT
GGTTATGGTGGCGCTGTTCCGACGGGGGTCGGCCATGGACAAAGCGGAGA
CCATCTGGGGGCTGACCTTGGAGCACGCCAAGAACCTCGCCGTGTTCGCG
CCCTGGTTATGGTGGCGCTGTTCCGACGGGGGTCGGCCATGGACAAAGCG
GAGACCATCTGGGGGCTGACCTTGGAGCACGCCAAGAACCTCGCCGTGTT
CGCGGGTTTGTACAAGGTGCTCATGGAGGCGTTGCTAGCCACAAAGCTGG
TCCCGCGGCGGCACTGCCCCCTGGTTGCCGGCGGTGTGGCGGGGAGGCTG
GTCTGGGCCAAGTATTCCGCTGTCAACTATCAGGGTTTGTACAAGGTGCT
CATGGAGGCGTTGCTAGCCACAAAGCTGGTCCCGCGGCGGCACTGCCCCC
TGGTTGCCGGCGGTGTGGCGGGGAGGCTGGTCTGGGCCAAGTATTCCGCT
GTCAACTATCAGGTGGTGCTCTACCTGTTCTCGCGGGTGACGGTGGGGCT
GGTGGCCTGGATGGCCAGGGAGGAGTGGGAGCCGTTTGCGTCCTGGGACT
TTCACTCCGCGTACCCCCACTTTGCCACTGCCGTCTGGGCGCTCGTCATG
TGGTGGTGCTCTACCTGTTCTCGCGGGTGACGGTGGGGCTGGTGGCCTGG
ATGGCCAGGGAGGAGTGGGAGCCGTTTGCGTCCTGGGACTTTCACTCCGC
GTACCCCCACTTTGCCACTGCCGTCTGGGCGCTCGTCATGTGGGTGTACG
AGAACGACCGGGACGCCCTGCACCCGTCCCTCGTATCCGCCATGAACTTC
CTCTACCGCGACTCGCACACCTGGGAGCACGCCGGGGATTTCCTGCCCTC
CCGACAGGCGTGCGGTATCCTGGCCGCCTACGCCATCTACGCATCCGTCA
CGTGGGCGACGGGGGCGAAGCGTCGCCCCAGCCCGCCGGGGCCGCCGGGG
CTGCCATCACTGCCACCGCCGCCGCCGGGCCCGGGTGGTAAGGTGTACGA
GAACGACCGGGACGCCCTGCACCCGTCCCTCGTATCCGCCATGAACTTCC
TCTACCGCGACTCGCACACCTGGGAGCACGCCGGGGATTTCCTGCCCTCC
CGACAGGCGTGCGGTATCCTGGCCGCCTACGCCATCTACGCATCCGTCAC
GTGGGCGACGGGGGCGAAGCGTCGCCCCAGCCCGCCGGGGCCGCCGGGGC
TGCCATCACTGCCACCGCCGCCGCCGGGCCCGGGTGGTAA
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