mRNA_S-ischiensis_contig102.1732.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig102.1732.1 vs. uniprot
Match: A0A6H5JXI4_9PHAE (FA_desaturase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JXI4_9PHAE) HSP 1 Score: 498 bits (1283), Expect = 1.030e-174 Identity = 222/332 (66.87%), Postives = 266/332 (80.12%), Query Frame = 1
Query: 7 PGRCFRKSLPRSLFYMMRDMGAIWALHQLYP-HVEHSWPLYIVWANATGFMMWALFVVGHDCGHGTFSEHTWANGLFGHLCHAPLLVPFWPWSKSHAEHHKYHNHIQKDMSFPWFGLEQYNKDLKKVTKFVLKTPFHPLASFGFLYLFVGFWDGSHYNPFGTLFWNRKERVQAAVSASACLAFAYLLVEVVFERDWAALGARYVFPWAIYNYWLVMVTYMQHHGPDTKTFDSTDFHFATAAMETIDRKYGWGVDSAHHHITDGHVVHHLFFTKIPHYNLPRATAALRPHLESLGVYKFQQNPLFLWDFWVHNFKYGLYTHSKAKDHRATIHY 999
P CF KSLPRSLFYM RDMG + AL LYP +V SWPL +W NA GFM+WALFV+GHDCGH TFS + W N L GHLCHAPLLVPFWPW+KSH EHHKYHNH++KDMS+PWFG +Q+ +++K TK LKTPFHP S+ F YL G++DGSH+NPF LFW+RKE+VQ AVS ++ L F YLLV V+F+ DW+A+ R++ P I NYWLVMVTY+QHH DTKTFD++DFHFATAAMET+DRK+GWG+D AHH+ITDGHV HHLFFTKIPHYNL +ATAA+RP LE LG+Y+++ NP FLW F N+K G YTHSKA DHRA +HY
Sbjct: 38 PEECFIKSLPRSLFYMARDMGCVLALQYLYPIYVAGSWPLTFLWWNANGFMLWALFVIGHDCGHTTFSNYPWVNALVGHLCHAPLLVPFWPWAKSHNEHHKYHNHVEKDMSYPWFGKQQFEQEVKPFTKLFLKTPFHPFTSYLFTYLLAGWYDGSHFNPFSVLFWSRKEQVQCAVSTASVLTFIYLLVSVLFDFDWSAIVVRHLVPVMIMNYWLVMVTYLQHHEEDTKTFDNSDFHFATAAMETVDRKFGWGIDDAHHNITDGHVAHHLFFTKIPHYNLQKATAAIRPSLEKLGLYRYRNNPNFLWVFARENYKLGFYTHSKAHDHRAKMHY 369
BLAST of mRNA_S-ischiensis_contig102.1732.1 vs. uniprot
Match: A0A835YPJ0_9STRA (Fatty acid desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPJ0_9STRA) HSP 1 Score: 474 bits (1219), Expect = 3.630e-165 Identity = 215/325 (66.15%), Postives = 253/325 (77.85%), Query Frame = 1
Query: 7 PGRCFRKSLPRSLFYMMRDMGAIWALHQLYP-HVEHSWPLYIVWANATGFMMWALFVVGHDCGHGTFSEHTWANGLFGHLCHAPLLVPFWPWSKSHAEHHKYHNHIQKDMSFPWFGLEQYNKDLKKVTKFVLKTPFHPLASFGFLYLFVGFWDGSHYNPFGTLFWNRKERVQAAVSASACLAFAYLLVEVVFERDWAALGARYVFPWAIYNYWLVMVTYMQHHGPDTKTFDSTDFHFATAAMETIDRKYGWGVDSAHHHITDGHVVHHLFFTKIPHYNLPRATAALRPHLESLGVYKFQQNPLFLWDFWVHNFKYGLYTHSKAKD 978
P CF KSL +SLFYM+RDMG I AL + YP +VE +WPL VW NA GFMMWALFVVGHDCGH TFSE+TW N + GHLCHAPLLVPFWPW++SH +HH YHNH++KD SFPWF EQY L V + +LKTP HPL S+G YLF G+WDGSH+NPFG+LF NR +RVQ AVS+ A F L + V E W+A +Y PW IYNYWLVMVTY+QHH PD+ T+D D+ FA AAMET+DRKY WGVD HH+ITDGHVVHHLFFTKIPHYNL +AT ALRP+LE LGVY++Q+NPLFLW F +N+KYGL+THSKA +
Sbjct: 39 PDECFHKSLVKSLFYMVRDMGLICALWKAYPVYVEGNWPLTFVWWNAMGFMMWALFVVGHDCGHTTFSEYTWVNAVCGHLCHAPLLVPFWPWAQSHHQHHSYHNHVEKDHSFPWFRKEQYATQLSGVGRTILKTPLHPLFSYGVSYLFFGYWDGSHFNPFGSLFKNRTQRVQCAVSSLAVALFLGLFLHYVIEYSWSAFAVKYAAPWCIYNYWLVMVTYLQHHEPDSITYDDADYSFAVAAMETVDRKYCWGVDDLHHNITDGHVVHHLFFTKIPHYNLMKATDALRPYLEGLGVYRYQRNPLFLWTFVQYNYKYGLFTHSKADE 363
BLAST of mRNA_S-ischiensis_contig102.1732.1 vs. uniprot
Match: A0A1S7C7R3_9STRA (Om n=1 Tax=Nannochloropsis oceanica TaxID=145522 RepID=A0A1S7C7R3_9STRA) HSP 1 Score: 319 bits (818), Expect = 7.520e-104 Identity = 157/318 (49.37%), Postives = 208/318 (65.41%), Query Frame = 1
Query: 7 PGRCFRKSLPRSLFYMMRDMGAIWALHQLYPHVEHSW--PLYIVWANATGFMMWALFVVGHDCGHGTFSEHTWANGLFGHLCHAPLLVPFWPWSKSHAEHHKYHNHIQKDMSFPWFGLEQYNKDLKKVTKFVLKTPFHPLASFGFLYLFVGFWDGSHYNPFGTLFWNRKERVQAAVSASACL---AFAYLLVEVVFERDWAALGARYVFPWAIYNYWLVMVTYMQHHGPDTKTFDSTDFHFATAAMETIDRKYGWGVDSAHHHITDGHVVHHLFFTKIPHYNLPRATAALRPHLESLGVYKFQQNPLFLWDFWVHNFK 945
P +CF+KSL RS +YM+RD A+ AL+ +YP V+ + P VW N GF MW LFV+GHDCGHG+FSE+ W N + GH+CHAPL+VP+WPW KSH HH YHNH+ KDMS PW E + +DL + +L+ P + FLYLF G DGSH PF LF + KERVQ AVS + A Y+ +E E A +G+ YV P ++N W+ MVTY+QHH DTK + ++++ A+ETIDR+YG G+D H+ITDGHV HHLFFT+IPHY+L ATAA+R L+ G YK +++ FL F N++
Sbjct: 17 PEKCFQKSLLRSFYYMLRDFAALAALYFVYPTVQAKYGLPGLFVWWNLAGFFMWCLFVIGHDCGHGSFSEYKWLNDICGHICHAPLMVPYWPWQKSHRLHHMYHNHLTKDMSHPWMTKEVF-EDLTPFEQALLENPLSLFIKYTFLYLFAGKMDGSHVVPFSPLFTDTKERVQCAVSTLGMVVAGALVYIGLEGGKEGGMARIGSIYVVPLLVFNAWITMVTYLQHHDEDTKVYAEGEWNYIKGALETIDREYGMGIDDLSHNITDGHVAHHLFFTQIPHYHLTAATAAVRQCLQPTGTYKKRRSWNFLARFTELNYR 333
BLAST of mRNA_S-ischiensis_contig102.1732.1 vs. uniprot
Match: I2CR09_NANGC (Glycerolipid omega-3 fatty acid desaturase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR09_NANGC) HSP 1 Score: 315 bits (808), Expect = 1.030e-101 Identity = 157/319 (49.22%), Postives = 209/319 (65.52%), Query Frame = 1
Query: 7 PGRCFRKSLPRSLFYMMRDMGAIWALHQLYPHVEHSWPL--YIVWANATGFMMWALFVVGHDCGHGTFSEHTWANGLFGHLCHAPLLVPFWPWSKSHAEHHKYHNHIQKDMSFPWFGLEQYNKDLKKVTKFVLKTPFHPLASFGFLYLFVGFWDGSHYNPFGTLFWNRKERVQAAVSASACLAFAYLLVEVVFERD----WAALGARYVFPWAIYNYWLVMVTYMQHHGPDTKTFDSTDFHFATAAMETIDRKYGWGVDSAHHHITDGHVVHHLFFTKIPHYNLPRATAALRPHLESLGVYKFQQNPLFLWDFWVHNFK 945
P +CF+KSL RS++YM+RD A+ AL+ +YP V+ ++ L VW N GF MW LFV+GHDCGHG+FSE+ W N + GH+CHAPL+VP+WPW KSH HH YHNH+ KDMS PW E + +DL + +L+ P + FLYLF G DGSH P LF + KER+Q AVS + C+ A +L+ V E A +G+ Y+ P ++N W+ MVTY+QHH DTK + ++ + A+ETIDR+YG G+D H+ITDGHV HHLFFT+IPHY+L ATAA+R L G YK +Q+ FL F N+K
Sbjct: 67 PEKCFQKSLLRSVYYMLRDFAALAALYIIYPSVQANFGLAGLFVWWNLAGFFMWCLFVIGHDCGHGSFSEYKWFNDVCGHICHAPLMVPYWPWQKSHRLHHMYHNHLTKDMSHPWMTQEIF-EDLTPFEQALLENPLSLFIKYTFLYLFAGKLDGSHVLPTSPLFSDTKERIQCAVS-TLCMLVAGVLIYVGLEGGAEGGLARIGSMYLIPLLVFNAWITMVTYLQHHDEDTKVYAEGEWSYIKGALETIDREYGMGIDDLSHNITDGHVAHHLFFTQIPHYHLKDATAAVRQLLTPTGTYKKKQSWNFLGKFTELNYK 383
BLAST of mRNA_S-ischiensis_contig102.1732.1 vs. uniprot
Match: A0A7S4PZI0_9DINO (Hypothetical protein n=2 Tax=Sar TaxID=2698737 RepID=A0A7S4PZI0_9DINO) HSP 1 Score: 290 bits (743), Expect = 7.390e-93 Identity = 144/312 (46.15%), Postives = 197/312 (63.14%), Query Frame = 1
Query: 7 PGRCFRKSLPRSLFYMMRDMGAIWALHQLYPHVEH-SWP-LYIVWANATGFMMWALFVVGHDCGHGTFSEHTWANGLFGHLCHAPLLVPFWPWSKSHAEHHKYHNHIQKDMSFPWFGLEQYNKDLKKVTKFVLKTPFHPLASFGFLYLFVGFWDGSHYNPFGTLFWNRKERVQAAVSASACLAFAYLLVEVVFERD-WAALGARYVFPWAIYNYWLVMVTYMQHHGPDTKTFDSTDFHFATAAMETIDRKYGWGVDSAHHHITDGHVVHHLFFTKIPHYNLPRATAALRPHLESLG--VYKFQQNPLFLWDF 927
P CF KSLPRSLFYM RD AI Y + + W L+I W N GF MW LFVVGHDCGH +FS + W N L GH+CHAPL+VP+WPW +SH HH YHNH KD S PW + + + L + ++ P + ++YL G DGSH++PF LF ++RVQ AVS+ + +AF+ V + F D W + Y P +N WLV+VTY+QHH +T +D ++++ A ET+DR YG+G+D HH+ITDGHV+HH+FFT+IPHY+L ATAA+ P ++ G +YK Q++ FL+ +
Sbjct: 55 PSHCFVKSLPRSLFYMFRDFLAIGLCVYFYDNFKALGWTGLFIYW-NLAGFFMWCLFVVGHDCGHTSFSNYGWLNDLCGHICHAPLMVPYWPWRRSHHLHHSYHNHTDKDKSHPWMRQQDWAQ-LNAIQAAGMECPLFAFVGYTWIYLLAGICDGSHFSPFSKLFETTQQRVQCAVSSLSVVAFS---VGMYFYFDSWGQWFSMYFGPLCFFNMWLVLVTYLQHHDDETLAYDEGEWNYLRGAFETVDRTYGFGIDDIHHNITDGHVLHHIFFTQIPHYHLKEATAAIVPVIQKYGKGLYKHQESRDFLYKY 361
BLAST of mRNA_S-ischiensis_contig102.1732.1 vs. uniprot
Match: A0A811KVY1_9BILA (Hypothetical protein n=1 Tax=Bursaphelenchus okinawaensis TaxID=465554 RepID=A0A811KVY1_9BILA) HSP 1 Score: 273 bits (698), Expect = 4.060e-86 Identity = 132/310 (42.58%), Postives = 189/310 (60.97%), Query Frame = 1
Query: 7 PGRCFRKSLPRSLFYMMRDMGAIWALHQLYPHVEH--SWPLYIVWANATGFMMWALFVVGHDCGHGTFSEHTWANGLFGHLCHAPLLVPFWPWSKSHAEHHKYHNHIQKDMSFPWFGLEQYNKDLKKVTKFVLKTPFHPLASFGFLYLFVGFWDGSHYNPFGTLFWNRKERVQAAVSASACLAFAYLLVEVVFERDWAALGARYVFPWAIYNYWLVMVTYMQHHGPDTKTFDSTDFHFATAAMETIDRKYGWGVDSAHHHITDGHVVHHLFFTKIPHYNLPRATAALRPHLESL-GVYKFQQNPLFLWDF 927
P CF K +S+F+++ D I L+ P++E WP +VW G ++LFVVGHDCGHGTFSE+TW N + GH+ HAP+L P+WPW KSH +HH+Y +H++KD PW+ E+Y ++ + +F K P + F+YL +G DGSHY P+ LF ++RV+ AVS S C+A AY+ V+ + ++ Y+ P WLVMVTY+QH + + ++ ++ F +TIDR YG +D+ HHITDGHV HHLFFTKIPHY+L AT ++ + G+YK Q N L L +F
Sbjct: 44 PPECFEKDWRKSMFFLVWDYAVIAGLYYALPYIEQYGGWPGLLVWYYVVGMFGFSLFVVGHDCGHGTFSEYTWLNDIIGHVAHAPILAPYWPWQKSHRQHHQYTSHLEKDKGHPWYTQEEYVQEPWVIQQF-FKFPLSAFVRWNFVYLTLGLPDGSHYWPYSKLFKTTEDRVKCAVSTSLCIASAYVAF-VICDYSFSTYVKYYLAPVLFQGLWLVMVTYLQHQDEEIEVYEDAEWSFVRGQTQTIDRTYGMFIDTLMHHITDGHVAHHLFFTKIPHYHLIEATEGIKKVFKKYPGLYKKQNNFLTLLEF 351
BLAST of mRNA_S-ischiensis_contig102.1732.1 vs. uniprot
Match: A0A7R9YMG6_DIALT (Hypothetical protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YMG6_DIALT) HSP 1 Score: 271 bits (693), Expect = 1.140e-85 Identity = 138/310 (44.52%), Postives = 182/310 (58.71%), Query Frame = 1
Query: 7 PGRCFRKSLPRSLFYMMRDMGAIWALHQLYPHVEHSWP--LYIVWANATGFMMWALFVVGHDCGHGTFSEHTWANGLFGHLCHAPLLVPFWPWSKSHAEHHKYHNHIQKDMSFPWFGLEQYNKDLKKVTKFVLKTPFHPLASFGFLYLFVGFWDGSHYNPFGTLFWNRKERVQAAVSASACLAFAYLLVEVVFERDWAALGARYVFPWAIYNYWLVMVTYMQHHGPDTKTFDSTDFHFATAAMETIDRKYGWGVDSAHHHITDGHVVHHLFFTKIPHYNLPRATAALRPHLESLGVYKFQQNPLFLWDFW 930
P CF K RSL+++ RD+ + +YPHV S LY+ + N GF MWALFVVGHDCGH TFS N + GH+ HAPLLVP++PW+ SH HH YHNH +KD S PWF K L T+ LK+P P ++ +YLF G +DGSH P L+ R + + S A+ + WA L Y +A + +WL MVTY QHH T +D D+ + A++TIDR YG+G+DS HH+I+DGHVVHHLFFT++PHY+L +AT + P L GVYK + +L DFW
Sbjct: 34 PQECFVKDTGRSLWFLARDLAVLATAPLVYPHVAASANPLLYLAYWNFYGFFMWALFVVGHDCGHTTFSNSKLLNDVCGHIAHAPLLVPYYPWAMSHRRHHMYHNHQKKDASHPWFTKASMPK-LPAFTRSFLKSPLAPFLAYP-IYLFEGSFDGSHVFPLSKLYRGASTRAKLECAVSTATVLAFGAAAKLACGSWATLALAYGGCYACFTFWLFMVTYFQHHDHGTLVYDDADWSYLKGALQTIDRTYGFGLDSLHHNISDGHVVHHLFFTQVPHYHLTKATEHVAPFLAKAGVYKKVVHDNYLKDFW 341
BLAST of mRNA_S-ischiensis_contig102.1732.1 vs. uniprot
Match: A0A4D9DBT0_9STRA (FA_desaturase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBT0_9STRA) HSP 1 Score: 271 bits (692), Expect = 1.880e-85 Identity = 142/319 (44.51%), Postives = 190/319 (59.56%), Query Frame = 1
Query: 7 PGRCFRKSLPRSLFYMMRDMGAIWALHQLYPHVEHSWPL--YIVWANATGFMMWALFVVGHDCGHGTFSEHTWANGLFGHLCHAPLLVPFWPWSKSHAEHHKYHNHIQKDMSFPWFGLEQYNKDLKKVTKFVLKTPFHPLASFGFLYLFVGFWDGSHYNPFGTLFWNRKERVQAAVSASACLAFAYLLVEVVFERD----WAALGARYVFPWAIYNYWLVMVTYMQHHGPDTKTFDSTDFHFATAAMETIDRKYGWGVDSAHHHITDGHVVHHLFFTKIPHYNLPRATAALRPHLESLGVYKFQQNPLFLWDFWVHNFK 945
P +CF+KSL RS++YM+RD A+ AL+ +YP V+ ++ L VW N GF MW LFV+GHDCGHG+FSE+ W N + GH+CHAPL+VP+WPW K DL + +L+ P + FLYLF G DGSH P LF KER+Q AVS + C+ A +L+ V E A +G+ Y+ P ++N W+ MVTY+QHH DTK + ++ + A+ETIDR+YG G+D H+ITDGHV HHLFFT+IPHY+L ATAA+R L G YK +Q+ FL F N+K
Sbjct: 17 PEKCFQKSLLRSVYYMLRDFAALAALYIIYPSVQANFGLAGLFVWWNLAGFFMWCLFVIGHDCGHGSFSEYKWFNDVCGHICHAPLMVPYWPWQK----------------------------DLTPFEQALLENPLSLFIKYTFLYLFAGKLDGSHVLPTSPLFSGTKERIQCAVS-TLCMLVAGVLIYVGLEGGAEGGLARIGSMYLIPLLVFNAWITMVTYLQHHDEDTKVYAEGEWSYIKGALETIDREYGMGIDDLSHNITDGHVAHHLFFTQIPHYHLKDATAAVRQLLTPTGTYKKKQSWNFLGKFTELNYK 306
BLAST of mRNA_S-ischiensis_contig102.1732.1 vs. uniprot
Match: A0A507E9I1_9FUNG (FA_desaturase domain-containing protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E9I1_9FUNG) HSP 1 Score: 268 bits (686), Expect = 2.600e-84 Identity = 138/301 (45.85%), Postives = 180/301 (59.80%), Query Frame = 1
Query: 7 PGRCFRKSLPRSLFYMMRDMGAIWALHQLYPHVEHS-------WPLYIVWANATGFMMWALFVVGHDCGHGTFSEHTWANGLFGHLCHAPLLVPFWPWSKSHAEHHKYHNHIQKDMSFPWFGLEQYNKDLKKVTKFVLKTPFHPLASFGFLYLFVGFWDGSHYNPFGTLFWNRKERVQAAVSASACLAFAYLLVEVVFERDWAALGARYVFPWAIYNYWLVMVTYMQHHGPDTKTFDSTDFHFATAAMETIDRKYGWGV-DSAHHHITDGHVVHHLFFTKIPHYNLPRATAALRPHLESLG 885
P F KSL S+ Y + D + L Y H W Y+VWAN GF MW+ FVVGHDCGHG+FS++ N + GHL H LLVP+WPW++SHA+HH YHNH KDMS W + + K + L PF ++ F YL G+ DGSH+ P+G LF N +ERVQ +S LA YL+ W+A +V PW+IYN WL +VTY+QHH DT+ + + ++ F T A++T+DR YG+G+ D H+ITDGHVVHHLF+T IPHY L AT A+ ESLG
Sbjct: 43 PAHVFEKSLAHSMAYFVWDSAVLAGLFYGYKAYLHGVSWGATEWAAYVVWANVVGFFMWSFFVVGHDCGHGSFSDNKTINAVVGHLSHGFLLVPYWPWARSHAQHHAYHNHKDKDMSHVWSTPAEESTGAKFLKDQPLLVPF----AYTFGYLLAGWTDGSHFVPWGKLFRNNRERVQCVISTGVVLA--YLVAIRYAAGSWSAFSVGFVVPWSIYNTWLYVVTYLQHHTADTQVYSNENWTFTTGAVQTVDRVYGFGLLDKLMHNITDGHVVHHLFYTSIPHYRLMDATPAVA---ESLG 334
BLAST of mRNA_S-ischiensis_contig102.1732.1 vs. uniprot
Match: A0A811KUA0_9BILA (Hypothetical protein n=1 Tax=Bursaphelenchus okinawaensis TaxID=465554 RepID=A0A811KUA0_9BILA) HSP 1 Score: 267 bits (682), Expect = 8.940e-84 Identity = 133/310 (42.90%), Postives = 186/310 (60.00%), Query Frame = 1
Query: 7 PGRCFRKSLPRSLFYMMRDMGAIWALHQLYPHVEH--SWPLYIVWANATGFMMWALFVVGHDCGHGTFSEHTWANGLFGHLCHAPLLVPFWPWSKSHAEHHKYHNHIQKDMSFPWFGLEQYNKDLKKVTKFVLKTPFHPLASFGFLYLFVGFWDGSHYNPFGTLFWNRKERVQAAVSASACLAFAYLLVEVVFERDWAALGARYVFPWAIYNYWLVMVTYMQHHGPDTKTFDSTDFHFATAAMETIDRKYGWGVDSAHHHITDGHVVHHLFFTKIPHYNLPRATAALRPHLESL-GVYKFQQNPLFLWDF 927
P CF K +S+ + + D+ + L+ + P+VEH W +VW G ++LFVVGHDCGHGTFSE+TW N + GH HAP+L P+WPW KSH +HH+Y +HI KDM PW+ E+Y + V K K P L + +YL VG DGSHY P+ LF ++R++ AVS SAC+A A + ++ L +V P + W+VMVTY+QH + + ++ ++ F +T+DR YG +D+ HHITDGHV HHLFFTKIPHY+L AT ++ L+ G+YK Q N L L +F
Sbjct: 40 PPECFEKDWKKSMAFFVWDVAVLATLYSIVPYVEHYGGWTGLLVWYYIMGMFGFSLFVVGHDCGHGTFSEYTWLNDIVGHFAHAPILAPYWPWQKSHRQHHQYTSHIDKDMGHPWYTEEEY-MEKHWVFKHFAKFPLSGLIRWTIIYLAVGIPDGSHYWPYSRLFKTTQDRIKCAVSTSACIACASFAFYLCDYSIYSFLKYYFV-PVMFFGLWIVMVTYLQHQDEEIEVYEQDEWSFVRGQTQTVDRTYGLYIDTLMHHITDGHVAHHLFFTKIPHYHLMEATEGIKKVLQKYPGLYKHQSNFLTLLEF 347 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig102.1732.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig102.1732.1 >prot_S-ischiensis_contig102.1732.1 ID=prot_S-ischiensis_contig102.1732.1|Name=mRNA_S-ischiensis_contig102.1732.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=333bp RAPGRCFRKSLPRSLFYMMRDMGAIWALHQLYPHVEHSWPLYIVWANATGback to top mRNA from alignment at S-ischiensis_contig102:24596..30709- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig102.1732.1 ID=mRNA_S-ischiensis_contig102.1732.1|Name=mRNA_S-ischiensis_contig102.1732.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=6114bp|location=Sequence derived from alignment at S-ischiensis_contig102:24596..30709- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig102:24596..30709- >mRNA_S-ischiensis_contig102.1732.1 ID=mRNA_S-ischiensis_contig102.1732.1|Name=mRNA_S-ischiensis_contig102.1732.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1998bp|location=Sequence derived from alignment at S-ischiensis_contig102:24596..30709- (Schizocladia ischiensis KU_0333)back to top |