Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | no signal peptide or anchor |
| Exons | 2 |
| Model size | 164 |
| Cds size | 162 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815545.5898888-CDS-S-ischiensis_contig100:333921..334025 | 1622815545.5898888-CDS-S-ischiensis_contig100:333921..334025 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig100 333922..334025 + |
| 1695739760.8838906-CDS-S-ischiensis_contig100:333921..334025 | 1695739760.8838906-CDS-S-ischiensis_contig100:333921..334025 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig100 333922..334025 + |
| 1622815545.606077-CDS-S-ischiensis_contig100:334166..334224 | 1622815545.606077-CDS-S-ischiensis_contig100:334166..334224 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig100 334167..334224 + |
| 1695739760.8967474-CDS-S-ischiensis_contig100:334166..334224 | 1695739760.8967474-CDS-S-ischiensis_contig100:334166..334224 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig100 334167..334224 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig100.1689.1 >prot_S-ischiensis_contig100.1689.1 ID=prot_S-ischiensis_contig100.1689.1|Name=mRNA_S-ischiensis_contig100.1689.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=54bp
RKTGFARTNTTFTRRKTGFARRSCASCHLRSPLPCHREHLFTSVKGSLFP
RGHG back to topmRNA from alignment at S-ischiensis_contig100:333922..334224+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig100.1689.1 ID=mRNA_S-ischiensis_contig100.1689.1|Name=mRNA_S-ischiensis_contig100.1689.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=303bp|location=Sequence derived from alignment at S-ischiensis_contig100:333922..334224+ (Schizocladia ischiensis KU_0333)
AGAAAGACCGGCTTCGCGAGGACAAACACGACCTTCACGAGAAGGAAAAC
CGGCTTCGCGAGGAGAAGCTGCGCCTCATGCCATCTCCGCAGCCCGCTGC
CCTGGTGCGAACCAAAAAGAACCACGAAGAACCAGGAAGAACCAAAAAGA
ACCACTGACCGAAATGTGGCGACCGCGACCACGCGAGCTTACGGCCCCCG
TTCCATCCGTATCTTCGTTCCTGCCATCGACCAATGGCCTTGAAGCCATC
GTGAGCACCTTTTCACCAGCGTGAAGGGCTCTCTGTTCCCGCGGGGCCAT
GGC back to topCoding sequence (CDS) from alignment at S-ischiensis_contig100:333922..334224+ >mRNA_S-ischiensis_contig100.1689.1 ID=mRNA_S-ischiensis_contig100.1689.1|Name=mRNA_S-ischiensis_contig100.1689.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=324bp|location=Sequence derived from alignment at S-ischiensis_contig100:333922..334224+ (Schizocladia ischiensis KU_0333)
AGAAAGACCGGCTTCGCGAGGACAAACACGACCTTCACGAGAAGGAAAAC
CGGCTTCGCGAGGAGAAGCTGCGCCTCATGCCATCTCCGCAGCCCGCTGC
CCTGAGAAAGACCGGCTTCGCGAGGACAAACACGACCTTCACGAGAAGGA
AAACCGGCTTCGCGAGGAGAAGCTGCGCCTCATGCCATCTCCGCAGCCCG
CTGCCCTGCCATCGTGAGCACCTTTTCACCAGCGTGAAGGGCTCTCTGTT
CCCGCGGGGCCATGGCCCATCGTGAGCACCTTTTCACCAGCGTGAAGGGC
TCTCTGTTCCCGCGGGGCCATGGC back to top
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