Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 246 |
| Cds size | 246 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815545.4806013-CDS-S-ischiensis_contig100:254139..254329 | 1622815545.4806013-CDS-S-ischiensis_contig100:254139..254329 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig100 254140..254329 - |
| 1695739760.8257608-CDS-S-ischiensis_contig100:254139..254329 | 1695739760.8257608-CDS-S-ischiensis_contig100:254139..254329 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig100 254140..254329 - |
| 1622815545.4967113-CDS-S-ischiensis_contig100:255657..255713 | 1622815545.4967113-CDS-S-ischiensis_contig100:255657..255713 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig100 255658..255713 - |
| 1695739760.848938-CDS-S-ischiensis_contig100:255657..255713 | 1695739760.848938-CDS-S-ischiensis_contig100:255657..255713 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig100 255658..255713 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig100.1682.1 >prot_S-ischiensis_contig100.1682.1 ID=prot_S-ischiensis_contig100.1682.1|Name=mRNA_S-ischiensis_contig100.1682.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=82bp
SLWDLFVSGRLSFRGFYSWFVLFDATGATTAQGQLPSPVLATGTTPAIAQ
TGVGMTSGNRGMQGPVPVPQQSAQGLPPPPPL back to topmRNA from alignment at S-ischiensis_contig100:254140..255713- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig100.1682.1 ID=mRNA_S-ischiensis_contig100.1682.1|Name=mRNA_S-ischiensis_contig100.1682.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1574bp|location=Sequence derived from alignment at S-ischiensis_contig100:254140..255713- (Schizocladia ischiensis KU_0333)
AGCCTGTGGGACTTGTTTGTCTCCGGAAGGCTCAGTTTCCGGGGGTTCTA
TTCCTGGTGAGCCGGTGTCCGACAGTGGTGGAATATCTAAGCAAAACAGC
TTATTTATCCTCTTTGGTTTTATTTGTTTTTCTGCTCTGTGTGCCCTGCG
AGTGATTGCGAGTGAAGAGACGGGCTTCCCGGGATGGGGGGCCCTGAACT
CGCGTAAGTAGGAACACCTCTTTTTTCCCGCTCGATTTTTATCATCATGC
CACAAACTTCTTTATCGACAGTACTGATCTGTGTATGTATCGATAGTCGA
TATTCGATAGTTTGACCCACACTAAATCCAATTACTAGTAGCTAGTAGCA
CCACCCACAAAATCAGTCGATCCCGATAGCTATCTACTGATCGATGTTCC
ATCACTGGTGCCTGACGACTGCCCGTACTAGAGTTCCAGATATGTAATGT
GATGTGATGTGTACTCTAATTTACTGTAGTTTGACATCACATCACGTCAC
CATCACATCAAATCACAAGCCGCCGGCCGGTGGCATGCGCGGGACATGGG
GGAATAACAACCCTGTCCGATGTGAGCACGTACTGTGATGTGATGTGCAA
TCTAATTTACTGTAGTTTGACATCACATCACATCGCCATCACATCAAATC
ACAGGCCGACGGTGGCATGCATGGGACACGGGGTAAAACTTCCCGACATG
AAGGGTTGTGAACTGGCGCCGGTTACTACCGGTCGGTACCGGTTAACTGG
TTTAACTGGTTAACCGACCGGTGGCCAATCAACTCCATCACCACCACCAC
CACCACCACCACCACCACCACCACCACCGCCACCGCCACCGTCACCACCA
TCACCGCCACCGTCACCACCACCATCACAACCACCGCCACCACCACTGCC
ACCACCACCACCACCACCACCACCACCACCACCACCACCGCCACCACCGC
CATCACCACCACCACCACCACCACCACCACCACCACCACCACCACCCACC
ACCACCGTCACCACCACCACCACCGCCACCACCACCACCACCACCACCAC
CGCCTCCACCACCACCAACACCGCCACCACCACCACCACCACCACCACCA
CCGCCACCACCGCCACCACCATCACCACCACCAACACCGCCACCACCGCT
ACCACCACCGCCACCAACCACCGCCACCACCACCACCACCACCACCACCA
CCACCACCACCAATACCACCACCACCACCGCCACCACCACCACCACCACC
GCCAACACCGCCAACACCGCCACTACTACCACCGCCACCACAACCACAAC
CACCACCGCCGCCGCCACCACGACCACCACCACCACCACCACCACCACCA
CCGCCACCACCTACCTCTACAACACCCCCCACAGGTTTGTGCTCTTTGAT
GCCACGGGCGCCACCACGGCCCAGGGGCAGCTGCCGTCCCCGGTACTCGC
GACAGGCACCACGCCCGCCATCGCCCAGACAGGCGTGGGCATGACGAGCG
GGAATCGCGGCATGCAAGGGCCAGTGCCGGTGCCGCAGCAATCGGCTCAG
GGACTGCCGCCTCCTCCTCCTCTT back to topCoding sequence (CDS) from alignment at S-ischiensis_contig100:254140..255713- >mRNA_S-ischiensis_contig100.1682.1 ID=mRNA_S-ischiensis_contig100.1682.1|Name=mRNA_S-ischiensis_contig100.1682.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=492bp|location=Sequence derived from alignment at S-ischiensis_contig100:254140..255713- (Schizocladia ischiensis KU_0333)
AGCCTGTGGGACTTGTTTGTCTCCGGAAGGCTCAGTTTCCGGGGGTTCTA
TTCCTGAGCCTGTGGGACTTGTTTGTCTCCGGAAGGCTCAGTTTCCGGGG
GTTCTATTCCTGGTTTGTGCTCTTTGATGCCACGGGCGCCACCACGGCCC
AGGGGCAGCTGCCGTCCCCGGTACTCGCGACAGGCACCACGCCCGCCATC
GCCCAGACAGGCGTGGGCATGACGAGCGGGAATCGCGGCATGCAAGGGCC
AGTGCCGGTGCCGCAGCAATCGGCTCAGGGACTGCCGCCTCCTCCTCCTC
TTGTTTGTGCTCTTTGATGCCACGGGCGCCACCACGGCCCAGGGGCAGCT
GCCGTCCCCGGTACTCGCGACAGGCACCACGCCCGCCATCGCCCAGACAG
GCGTGGGCATGACGAGCGGGAATCGCGGCATGCAAGGGCCAGTGCCGGTG
CCGCAGCAATCGGCTCAGGGACTGCCGCCTCCTCCTCCTCTT back to top
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