Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | no signal peptide or anchor |
| Exons | 2 |
| Model size | 173 |
| Cds size | 171 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815545.3460765-CDS-S-ischiensis_contig100:121679..121763 | 1622815545.3460765-CDS-S-ischiensis_contig100:121679..121763 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig100 121680..121763 - |
| 1695739760.76656-CDS-S-ischiensis_contig100:121679..121763 | 1695739760.76656-CDS-S-ischiensis_contig100:121679..121763 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig100 121680..121763 - |
| 1622815545.3566554-CDS-S-ischiensis_contig100:123279..123366 | 1622815545.3566554-CDS-S-ischiensis_contig100:123279..123366 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig100 123280..123366 - |
| 1695739760.7766242-CDS-S-ischiensis_contig100:123279..123366 | 1695739760.7766242-CDS-S-ischiensis_contig100:123279..123366 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig100 123280..123366 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig100.1674.1 >prot_S-ischiensis_contig100.1674.1 ID=prot_S-ischiensis_contig100.1674.1|Name=mRNA_S-ischiensis_contig100.1674.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=57bp
TWTRAVPPSPDGPPPPARVVSDPHYGQPQADETRTAVGPSISGFGARDEN
LSGPGVR back to topmRNA from alignment at S-ischiensis_contig100:121679..123366- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig100.1674.1 ID=mRNA_S-ischiensis_contig100.1674.1|Name=mRNA_S-ischiensis_contig100.1674.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1688bp|location=Sequence derived from alignment at S-ischiensis_contig100:121679..123366- (Schizocladia ischiensis KU_0333)
ACCTGGACAAGGGCAGTACCCCCCTCCCCAGACGGGCCACCTCCGCCGGC
CCGAGTTGTCAGCGACCCTCACTACGGCCAACCTCAGGTAACCATGGCAC
AAAAGTGCGATGTTAAAAAATAGCAATTTGGGGACGCAAGTCGAGCAAAC
CGATATTTTTGGGAAAATCTCGATATTTGGGCAAGTTCTTAAATTGGGCC
TTCGTTGCCGAAACGCCGTACAAGGTGTGGAAACCCCATGGATTTTGGCA
AATAGCACTTACTCACCAAAATCATCGGGGTTTCCATACCTGGATAGCGT
TTCGCGGCCGGACGTCAATATTTCGATATTTTTGTCGATGTTTGGGCCGG
TTTTCGATCGCAATTTGGGCAAAACTTTCCATATCGCAAAAAAAAATGTT
TGGGCAAAAAAAATTGCACTTTTGTGCCATGGTTACCAGTGGACAAGGGC
AGTACCCCCCTCCCCGGACGGGCCACCTCCGCGGACGCCTGCCATGCCCG
TGCGAGTTGTCGGCGTCCCGCACTGCGGCCAACCTCAGGTCCGGCTTGGT
TTGTTGCAAGAAGATGTTTTCTTCTTGCCCTGCGAGGGAAGGAAGGGCTT
CGTTGAGTCCCGTTTCGGGACGAGCCTTTTGGCACGGGGCCTGGAACTCG
CCGCTTATCTGCTACTGAAGTAAAAAGCGAGTGGGAAAAAGAGGAGGTGT
TTACTTGCGCGAGTTCAGGGCCCCATCCCCGGAAGCCCGTCCTTTCACTC
GATCGCCTTCACTCACAGGGCATACGGAACAGAAAAACAAGGGAAGGAAG
GGCCCTCGCGTTATTGTACCAGGCCCAGTGTGCAAGTACTCCTATGTAGT
GCTGTGGTGCAGTATCAGTACTGTATATGGTACTTCGCACATCTGCAAGC
ACAGTCCAGTTGCCCCCCCCCCATGCACACACTACTCTAGCCCCCCCCCC
ACCGCTTTCAACCCAGTGCAGGCGTGGTTTTGTTGAACTAGTCGTCGCCA
TTTCTGACCCCCGGGGACCACATCATCTGTCACTGACAGGGTTGGCACTT
AGCCTCGAAGTGGTGCCCTTTTAGGCCCTTGCTTAGAGTTATTAGGGGTA
AGTAGACCTAAAATGAAGGCTAGTTAGGCCCTAGTCAACCTCTAAGTGCC
AACCCTGCTCGCTGACTCTCAGGCCGACACGGCTCGGACAGATGTAGGCA
CGGCGATCTCAGGCTCCAGCAGTGATGATCGTGTTTTTATTGAACTACTG
TAGTCGTCGCCATTTTGACCCCCCGGGACCACATTGGCTGCCGGTGTCTC
GCTGACTCCCCCACCGCTTTCAACCCAGTGACGACGTGTTCTTGTTCAAC
AGTCGTCGCCATTTCCGACCCCCCCCTCCCCGGGACCACATTTGGCTGCC
GGTCTCTCACTGACTCTCAGGCTGACGCGACTCGGACAGCCGTAGGCCCA
TCGATCTTAGGCTCACACTACCTAGCGCCCCCCACCCCTGTCAACCCAGT
GACGGCGTGTTTTTGTTGAACTACTATAGTCGTCGCCGTTTCTGACCCCC
CCCCCCCCCCCCCCCGGGACCACATTGGCTGCGGGTCTCTCACTGACTCT
CAGGCTGACGAGACTCGGACAGCCGTAGGCCCATCGATCTCAGGCTTCGG
CGCAAGGGACGAGAACTTGAGCGGTCCGGGCGTGCGGG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig100:121679..123366- >mRNA_S-ischiensis_contig100.1674.1 ID=mRNA_S-ischiensis_contig100.1674.1|Name=mRNA_S-ischiensis_contig100.1674.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=342bp|location=Sequence derived from alignment at S-ischiensis_contig100:121679..123366- (Schizocladia ischiensis KU_0333)
ACCTGGACAAGGGCAGTACCCCCCTCCCCAGACGGGCCACCTCCGCCGGC
CCGAGTTGTCAGCGACCCTCACTACGGCCAACCTCAGACCTGGACAAGGG
CAGTACCCCCCTCCCCAGACGGGCCACCTCCGCCGGCCCGAGTTGTCAGC
GACCCTCACTACGGCCAACCTCAGGCTGACGAGACTCGGACAGCCGTAGG
CCCATCGATCTCAGGCTTCGGCGCAAGGGACGAGAACTTGAGCGGTCCGG
GCGTGCGGGCTGACGAGACTCGGACAGCCGTAGGCCCATCGATCTCAGGC
TTCGGCGCAAGGGACGAGAACTTGAGCGGTCCGGGCGTGCGG back to top
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