Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 605 |
| Cds size | 492 |
| Stop | 1 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815545.6494055-CDS-S-ischiensis_contig100:78195..78687 | 1622815545.6494055-CDS-S-ischiensis_contig100:78195..78687 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig100 78196..78687 + |
| 1695739760.904407-CDS-S-ischiensis_contig100:78195..78687 | 1695739760.904407-CDS-S-ischiensis_contig100:78195..78687 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig100 78196..78687 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815545.6633847-UTR-S-ischiensis_contig100:78687..78800 | 1622815545.6633847-UTR-S-ischiensis_contig100:78687..78800 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig100 78688..78800 + |
| 1695739760.912115-UTR-S-ischiensis_contig100:78687..78800 | 1695739760.912115-UTR-S-ischiensis_contig100:78687..78800 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig100 78688..78800 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig100.1671.1 >prot_S-ischiensis_contig100.1671.1 ID=prot_S-ischiensis_contig100.1671.1|Name=mRNA_S-ischiensis_contig100.1671.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=164bp
LVATYNTTVQKYSTTVYEVRVLGKCAIGRQQASAETIHTICPHCTRPTPS
HPGLPWAGGRLLRRQWRAVNGLWTTASLSQHEHIVYRAQHKRASLLPTKS
GFSPTSRPQCCTLCCTSKYFEIPTSTVPYVGHSIAASCTCCSTNGAQAKC
TDVSLPIKTQRVV* back to topmRNA from alignment at S-ischiensis_contig100:78196..78800+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig100.1671.1 ID=mRNA_S-ischiensis_contig100.1671.1|Name=mRNA_S-ischiensis_contig100.1671.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=605bp|location=Sequence derived from alignment at S-ischiensis_contig100:78196..78800+ (Schizocladia ischiensis KU_0333)
CTTGTTGCTACTTATAATACTACAGTACAGAAGTACAGTACTACTGTGTA
CGAAGTACGAGTACTTGGAAAATGTGCAATCGGGAGGCAACAGGCCTCGG
CTGAAACCATCCACACTATATGCCCACACTGCACAAGACCAACTCCCTCC
CACCCTGGCTTGCCATGGGCAGGAGGGAGATTGCTCCGCCGTCAATGGCG
TGCGGTCAATGGTCTCTGGACTACGGCAAGCTTATCACAACATGAGCACA
TAGTATATAGAGCACAACACAAACGGGCATCCCTCCTCCCCACAAAATCC
GGGTTTTCGCCCACAAGCCGCCCACAATGTTGCACCTTGTGTTGTACTTC
CAAGTACTTTGAAATACCTACTAGTACTGTACCGTACGTAGGGCACAGTA
TTGCTGCTAGCTGTACTTGCTGCAGTACAAACGGTGCCCAGGCAAAGTGT
ACTGATGTTTCCCTTCCGATAAAAACACAGCGTGTAGTGTGAGATTAACT
GTTCTCGTACTAGTAAAAACACGGGGCACATCGGTGGGCGATTTCGACTC
CAGTTTTTCAGCCAACCAACTCACTGAGGCGGTCCGTGTTCAGCCTTCTG
CAGCC back to topCoding sequence (CDS) from alignment at S-ischiensis_contig100:78196..78800+ >mRNA_S-ischiensis_contig100.1671.1 ID=mRNA_S-ischiensis_contig100.1671.1|Name=mRNA_S-ischiensis_contig100.1671.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=984bp|location=Sequence derived from alignment at S-ischiensis_contig100:78196..78800+ (Schizocladia ischiensis KU_0333)
CTTGTTGCTACTTATAATACTACAGTACAGAAGTACAGTACTACTGTGTA
CGAAGTACGAGTACTTGGAAAATGTGCAATCGGGAGGCAACAGGCCTCGG
CTGAAACCATCCACACTATATGCCCACACTGCACAAGACCAACTCCCTCC
CACCCTGGCTTGCCATGGGCAGGAGGGAGATTGCTCCGCCGTCAATGGCG
TGCGGTCAATGGTCTCTGGACTACGGCAAGCTTATCACAACATGAGCACA
TAGTATATAGAGCACAACACAAACGGGCATCCCTCCTCCCCACAAAATCC
GGGTTTTCGCCCACAAGCCGCCCACAATGTTGCACCTTGTGTTGTACTTC
CAAGTACTTTGAAATACCTACTAGTACTGTACCGTACGTAGGGCACAGTA
TTGCTGCTAGCTGTACTTGCTGCAGTACAAACGGTGCCCAGGCAAAGTGT
ACTGATGTTTCCCTTCCGATAAAAACACAGCGTGTAGTGTGACTTGTTGC
TACTTATAATACTACAGTACAGAAGTACAGTACTACTGTGTACGAAGTAC
GAGTACTTGGAAAATGTGCAATCGGGAGGCAACAGGCCTCGGCTGAAACC
ATCCACACTATATGCCCACACTGCACAAGACCAACTCCCTCCCACCCTGG
CTTGCCATGGGCAGGAGGGAGATTGCTCCGCCGTCAATGGCGTGCGGTCA
ATGGTCTCTGGACTACGGCAAGCTTATCACAACATGAGCACATAGTATAT
AGAGCACAACACAAACGGGCATCCCTCCTCCCCACAAAATCCGGGTTTTC
GCCCACAAGCCGCCCACAATGTTGCACCTTGTGTTGTACTTCCAAGTACT
TTGAAATACCTACTAGTACTGTACCGTACGTAGGGCACAGTATTGCTGCT
AGCTGTACTTGCTGCAGTACAAACGGTGCCCAGGCAAAGTGTACTGATGT
TTCCCTTCCGATAAAAACACAGCGTGTAGTGTGA back to top
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