mRNA_S-ischiensis_contig10.1664.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig10.1664.1 vs. uniprot
Match: D7G6J4_ECTSI (Pyrroline-5-carboxylate reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6J4_ECTSI) HSP 1 Score: 340 bits (873), Expect = 2.450e-112 Identity = 181/273 (66.30%), Postives = 222/273 (81.32%), Query Frame = 2
Query: 152 RLGFIGGGMMASAMVNGLVASKVAQPTDITVSDLYQPSLDRLAACGVNTTTSNQDVIGASDAIVIAVKPDVVPAVLEEIWEMANTEPPKGPVPLVISIAAGIPIAKLEELLPAGTRVVRVMPNTPCQVSEAAAAFAAGAHATDDDKALVAKLMGSVGYVCEVKEKQLDAVTGLSGSGPAYIFLLIEALADGGVRAGLPRAVALKLAAQTVRGAATMVLETGRHPGELKDGVCSPGGTTIAGVEALEKGGYRAAAMAAVAAATARSEELGKGSK 970
+LGFIG GMM+SAM+NG++A+KV +P +I SD+YQPSLDRL+A GV T+T+N++V+ +D IV+AVKPDV+PAVL EI + + LV+SIAAG+P++ LE L+P G RV+RVMPNTPC VSE+AAAF+ G+HA D+D+ LV L+ SVG+ CEVKE QLDAVTG+SGSGPAYIF+LIEALADGGVR GLPRA ALKLAAQTV+GAATMVLETG HPG LKD VCSPGGTTI VEALEK G+RAAA++AV AAT +S E+ K
Sbjct: 14 KLGFIGAGMMSSAMINGIIAAKVTEPGNIIASDVYQPSLDRLSASGVRTSTTNKEVVTGADVIVLAVKPDVIPAVLTEIEQFLTDDS------LVVSIAAGVPLSALENLVP-GKRVIRVMPNTPCLVSESAAAFSLGSHAKDEDRELVQSLLSSVGFACEVKESQLDAVTGVSGSGPAYIFVLIEALADGGVRMGLPRATALKLAAQTVKGAATMVLETGTHPGVLKDNVCSPGGTTICAVEALEKNGFRAAAISAVVAATNKSLEMRNTKK 279
BLAST of mRNA_S-ischiensis_contig10.1664.1 vs. uniprot
Match: A0A835Z523_9STRA (Pyrroline-5-carboxylate reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z523_9STRA) HSP 1 Score: 328 bits (840), Expect = 2.560e-107 Identity = 178/267 (66.67%), Postives = 216/267 (80.90%), Query Frame = 2
Query: 155 LGFIGGGMMASAMVNGLVASKVAQPTDITVSDLYQPSLDRLAACGVNTTTSNQDVIGASDAIVIAVKPDVVPAVLEEIWEMANTEPPKGPVPLVISIAAGIPIAKLEELLPAGTRVVRVMPNTPCQVSEAAAAFAAGAHATDDDKALVAKLMGSVGYVCEVKEKQLDAVTGLSGSGPAYIFLLIEALADGGVRAGLPRAVALKLAAQTVRGAATMVLETGRHPGELKDGVCSPGGTTIAGVEALEKGGYRAAAMAAVAAATARSEEL 955
+GFIG GMMASA++ G++ + A+P IT SD YQPSLDR AA GV+TT SN++V+ S + +AVKPDVV +VL+EI + + +P + L++SIAAGI + +E L +G RVVRVMPNTPC VSE+AAAFA G HAT +D+ALV +LMGSVGY CEVKE QLDAVTGLSGSGPAY++LLIEALADGGVR GLPR VAL+LAAQTV+GAATMV+ TG+HPG+LKD V SPGGTTIAG+EALEK G+R AAM AV AAT RS+EL
Sbjct: 8 IGFIGAGMMASALIKGVIKAGKAKPASITASDAYQPSLDRQAAEGVHTTLSNREVVSRSRVVFLAVKPDVVASVLDEIKD--DVDPDRH---LIVSIAAGISLESMEGRLNSGARVVRVMPNTPCLVSESAAAFALGTHATAEDRALVQELMGSVGYACEVKESQLDAVTGLSGSGPAYVYLLIEALADGGVRMGLPRQVALQLAAQTVKGAATMVMTTGQHPGQLKDAVTSPGGTTIAGIEALEKAGFRGAAMGAVVAATQRSQEL 269
BLAST of mRNA_S-ischiensis_contig10.1664.1 vs. uniprot
Match: D7FWF9_ECTSI (Pyrroline-5-carboxylate reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWF9_ECTSI) HSP 1 Score: 298 bits (762), Expect = 8.920e-95 Identity = 174/295 (58.98%), Postives = 212/295 (71.86%), Query Frame = 2
Query: 74 APTRGTFAA-AWKLPSVAMSSEGGGLGRLGFIGGGMMASAMVNGLVASKVAQPTDITVSDLYQPSLDRLAACGVNTTTSNQDVIGASDAIVIAVKPDVVPAVLEEIWEMANTEPPKGPVPLVISIAAGIPIAKLEELLPAGTRVVRVMPNTPCQVSEAAAAFAAGAHATDDDKALVAKLMGSVGYVCEVKEKQLDAVTGLSGSGPAYIFLLIEALADGGVRAGLPRAVALKLAAQTVRGAATMVLETGRHPGELKDGVCSPGGTTIAGVEALEKGGYRAAAMAAVAAATARSEEL 955
A RGT A A + + E G RLGF+G GMMA+AMVNG+VASKV +P ++ VS ++ SLDR A GV T+ N +V SD +V+AVKPDVVPAVL EI + LV+SIAAGIP+A LE+L P G RVVRVMPNTPC VSE A F+ G+ ATD+D+ V LMG+VG EVKE LD +TG+SGSGPAYI++LIEALADGGVR GLPRA+A++LAAQTV+GAA MVLETG HP LKD VCSPGG TIA +E+LEK G+R+AAM AV A ++S E+
Sbjct: 38 AQRRGTATAMATTVEDEVEAPEPGDGPRLGFVGAGMMATAMVNGIVASKVTEPDNVFVSAPHRSSLDRFAKLGVRTSDINLEVASGSDVVVVAVKPDVVPAVLREIAPHLRKDA------LVVSIAAGIPLAVLEQLAP-GKRVVRVMPNTPCLVSEGATGFSMGSLATDEDRDTVHALMGAVGLAVEVKEALLDGLTGVSGSGPAYIYVLIEALADGGVRMGLPRAMAIRLAAQTVKGAAEMVLETGEHPAVLKDNVCSPGGLTIAAIESLEKNGFRSAAMQAVIAVASKSIEM 325
BLAST of mRNA_S-ischiensis_contig10.1664.1 vs. uniprot
Match: A0A6H5JW87_9PHAE (Pyrroline-5-carboxylate reductase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW87_9PHAE) HSP 1 Score: 296 bits (758), Expect = 1.230e-93 Identity = 173/295 (58.64%), Postives = 210/295 (71.19%), Query Frame = 2
Query: 74 APTRGTFAA-AWKLPSVAMSSEGGGLGRLGFIGGGMMASAMVNGLVASKVAQPTDITVSDLYQPSLDRLAACGVNTTTSNQDVIGASDAIVIAVKPDVVPAVLEEIWEMANTEPPKGPVPLVISIAAGIPIAKLEELLPAGTRVVRVMPNTPCQVSEAAAAFAAGAHATDDDKALVAKLMGSVGYVCEVKEKQLDAVTGLSGSGPAYIFLLIEALADGGVRAGLPRAVALKLAAQTVRGAATMVLETGRHPGELKDGVCSPGGTTIAGVEALEKGGYRAAAMAAVAAATARSEEL 955
A RGT A A + E G LGF+G GMMA+AMVNG+VASKV +P ++ VS ++ SLDRLA G+ T+ N +V SD +V+AVKPDVVPAVL EI + LV+SIAAGIP+A LE+L P G RVVRVMPNTPC VSE A F+ G+ ATD+D+ V LMG+VG EVKE LD +TG+SGSGPAYI++LIEALADGGVR GLPRA+A+KLAAQTV+GAA MVLETG HP LKD VCSPGG TIA +E+LEK G+R+AAM AV ++S E+
Sbjct: 77 AQRRGTATAMATTAEDEVEAPEPGDAPTLGFVGAGMMATAMVNGIVASKVTEPGNVFVSAPHRSSLDRLAKLGIRTSDINVEVASGSDVVVVAVKPDVVPAVLREIAPHLRKDA------LVVSIAAGIPLAVLEQLAP-GKRVVRVMPNTPCLVSEGATGFSMGSLATDEDRDTVHALMGAVGLAVEVKEALLDGLTGVSGSGPAYIYVLIEALADGGVRMGLPRAMAIKLAAQTVKGAAEMVLETGEHPAVLKDNVCSPGGLTIAAIESLEKNGFRSAAMQAVITVASKSIEM 364
BLAST of mRNA_S-ischiensis_contig10.1664.1 vs. uniprot
Match: A0A7S0NZ61_9EUKA (Pyrroline-5-carboxylate reductase n=2 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NZ61_9EUKA) HSP 1 Score: 286 bits (731), Expect = 8.060e-91 Identity = 168/284 (59.15%), Postives = 199/284 (70.07%), Query Frame = 2
Query: 113 PSVAMSSEGGGLGRLGFIGGGMMASAMVNGLVASKVAQPTDITVSDLYQPSLDRLAA-CGVNTTTSNQDVIGASDAIVIAVKPDVVPAVLEEIWEMANTEPPKGPVPLVISIAAGIPIAKLEELLPAGTRVVRVMPNTPCQVSEAAAAFAAGAHATDDDKALVAKLMGSVGYVCEVKEKQLDAVTGLSGSGPAYIFLLIEALADGGVRAGLPRAVALKLAAQTVRGAATMVLETGRHPGELKDGVCSPGGTTIAGVEALEKGGYRAAAMAAVAAATARSEELGK 961
P V +GG L R+GF+G GMMA AM+ GLV + I SD+YQP +D LA GV TSNQ+V G +D +VIAVKP +V V EI E A ++P P+V+SIAAG+ + L E L RVVRVMPNTPC V E AAA+A + D D ALV ++G++G +VKE LDAVTGLSGSGPAY+F IEAL+DGGVRAGL R VA LAA+TVRGAATMVLETG+HPGELKD V SPGGTTIAGV ALE+GG RAA M AV +AT RS ELG+
Sbjct: 5 PMVLAGCDGGAL-RVGFVGAGMMAGAMIRGLVKTGSCAAEHICASDVYQPCIDALATELGVRGATSNQEVAGFADLLVIAVKPQMVQQVCFEIVEGAASKPK---APIVVSIAAGVTLTSLSEWLDESYRVVRVMPNTPCLVGELAAAYAPNSACADSDAALVGSMLGALGSAFKVKEVDLDAVTGLSGSGPAYVFQFIEALSDGGVRAGLTRPVATALAAKTVRGAATMVLETGKHPGELKDQVTSPGGTTIAGVHALEQGGMRAAVMNAVVSATERSRELGR 284
BLAST of mRNA_S-ischiensis_contig10.1664.1 vs. uniprot
Match: A0A7R9ZS92_9STRA (Pyrroline-5-carboxylate reductase n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZS92_9STRA) HSP 1 Score: 282 bits (722), Expect = 1.710e-89 Identity = 159/270 (58.89%), Postives = 204/270 (75.56%), Query Frame = 2
Query: 155 LGFIGGGMMASAMVNGLVASKVA-QPTDITVSDLYQPSLDRLAACGVNTTTSNQDVIG-ASDAIVIAVKPDVVPAVLEEIWEMANTEPPKGPVPLVISIAAGIPIAKLEELLPAGTRVVRVMPNTPCQVSEAAAAFAAGAHATDDDKALVAKLMGSVGYVCEVKEKQLDAVTGLSGSGPAYIFLLIEALADGGVRAGLPRAVALKLAAQTVRGAATMVLETGRHPGELKDGVCSPGGTTIAGVEALEKGGYRAAAMAAVAAATARSEELG 958
+GF+G GMMASA+++GL+ KV +P+ I SD+YQP+LDR A G+ TTT N + A DAI++AVKP+++P V I +++ L+ISIAAG+ + LE LL AG+RVVRVMPNTPC V EAA+A+A + T+DDK +V + G+VG +VKE+ L+ VTGLSGSGPAY++ IEALADGGVR+GLPR++ALKLAAQTV+GAA MVL TG HPG+LKD VCSPGGTTIAGVEALE GG R+A ++AV AAT RS +LG
Sbjct: 7 IGFVGCGMMASALMDGLIDKKVVKEPSRIITSDVYQPALDRAAGKGIATTTDNAKLCADAKDAIILAVKPNIIPEVCPIIGGAVDSQGA-----LIISIAAGVTLQTLESLL-AGSRVVRVMPNTPCLVGEAASAYAMSSACTEDDKTIVEAIFGAVGLCVQVKEELLNPVTGLSGSGPAYVYQFIEALADGGVRSGLPRSIALKLAAQTVKGAAEMVLTTGTHPGQLKDNVCSPGGTTIAGVEALENGGLRSATISAVKAATKRSMQLG 270
BLAST of mRNA_S-ischiensis_contig10.1664.1 vs. uniprot
Match: A0A8J5XYD6_DIALT (Pyrroline-5-carboxylate reductase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XYD6_DIALT) HSP 1 Score: 275 bits (703), Expect = 1.120e-86 Identity = 162/286 (56.64%), Postives = 196/286 (68.53%), Query Frame = 2
Query: 125 MSSEGGGLGRLGFIGGGMMASAMVNGLVASKVAQPTDITVSDLYQPSLDRLAA-CGVNTTTSNQDVIGASDAIVIAVKPDVVPAVLEEIWEMANTEPPKGPVPLVISIAAGIPIAKLEELLPAGT------RVVRVMPNTPCQVSEAAAAFAAGAHATDDDKALVAKLMGSVGYVCEVKEKQLDAVTGLSGSGPAYIFLLIEALADGGVRAGLPRAVALKLAAQTVRGAATMVLETGRHPGELKDGVCSPGGTTIAGVEALEKGGYRAAAMAAVAAATARSEELGK 961
++ EGG R+GFIG GMMA AM+ GLV + V ++ SD YQPSLD+L G+ TTT N+ V SD IVIAVKP V V ++I + LV+SIAAG+ +A + + + AG ++VRVMPNTP V E AAA+A H T D AL ++G++G +VKE LDAVTGLSGSGPAY+F IEAL+DGGVRAGLPR VA LAA+TVRGAATMVLETG+HP ELKD V SPGGTTIAGV ALE+GG RAA + AV AAT RS+ELGK
Sbjct: 2 LTKEGGAPVRMGFIGAGMMAGAMIRGLVKANVVSAANLMASDAYQPSLDKLRTELGIETTTDNKKVAQFSDVIVIAVKPGQVREVCQDIGHSNASA-------LVVSIAAGVQVASMAQWVQAGAGSSAPAKIVRVMPNTPALVGELAAAYAPNEHCTPADAALAGMMLGALGTAFKVKESDLDAVTGLSGSGPAYVFQFIEALSDGGVRAGLPRDVATALAAKTVRGAATMVLETGKHPAELKDQVTSPGGTTIAGVHALEQGGMRAAVINAVVAATERSKELGK 280
BLAST of mRNA_S-ischiensis_contig10.1664.1 vs. uniprot
Match: A0A6U3Z405_9STRA (Pyrroline-5-carboxylate reductase n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3Z405_9STRA) HSP 1 Score: 275 bits (702), Expect = 2.260e-86 Identity = 156/276 (56.52%), Postives = 202/276 (73.19%), Query Frame = 2
Query: 155 LGFIGGGMMASAMVNGLVASKVAQPTDITVSDLYQPSLDRLAACGVNTTTSNQDVIG-ASDAIVIAVKPDVVPAVLEEIWEMANTEPPKGPVPLVISIAAGIPIAKLEELLPAGTRVVRVMPNTPCQVSEAAAAFAAGAHATDDD------KALVAKLMGSVGYVCEV-KEKQLDAVTGLSGSGPAYIFLLIEALADGGVRAGLPRAVALKLAAQTVRGAATMVLETGRHPGELKDGVCSPGGTTIAGVEALEKGGYRAAAMAAVAAATARSEELG 958
+GFIG GMMASA++NGL++SK+A P+ I SD+YQPSLD+ AA G++TT+SN +V A D I++AVKP ++P+V +I ++ G ++ISIAAG+ +A LE LP G RV+RVMPNTPC + AA+ ++ G+ A+ + LV+ + GSVG EV E LDAVTG+SGSGPAY++ IEAL+DGGVR GL R VA +LAAQTV GAA MVLETG+HPGELKD V SPGGTTIAGVEALE+GG RA ++AV A+T RS +LG
Sbjct: 8 VGFIGAGMMASALMNGLISSKIASPSSIICSDVYQPSLDKAAANGISTTSSNAEVCNKAKDVIILAVKPHIIPSVCADIAKVEG-----GSDAVIISIAAGVTLATLEGALPKGARVIRVMPNTPCLIGAAASGYSLGSTASSTTEHALHCRGLVSTIFGSVGLAMEVPSEHLLDAVTGVSGSGPAYVYQFIEALSDGGVRCGLARNVATELAAQTVMGAAKMVLETGKHPGELKDAVTSPGGTTIAGVEALEQGGLRATTISAVKASTRRSMQLG 278
BLAST of mRNA_S-ischiensis_contig10.1664.1 vs. uniprot
Match: A0A7S4MWR8_9STRA (Pyrroline-5-carboxylate reductase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MWR8_9STRA) HSP 1 Score: 274 bits (700), Expect = 2.860e-86 Identity = 157/272 (57.72%), Postives = 193/272 (70.96%), Query Frame = 2
Query: 146 LGRLGFIGGGMMASAMVNGLVASKVAQPTDITVSDLYQPSLDRLAACGVNTTTSNQDVIG-ASDAIVIAVKPDVVPAVLEEIWEMANTEPPKGPVPLVISIAAGIPIAKLEELLPAGTRVVRVMPNTPCQVSEAAAAFAAGAHATDDDKALVAKLMGSVGYVCEVKEKQLDAVTGLSGSGPAYIFLLIEALADGGVRAGLPRAVALKLAAQTVRGAATMVLETGRHPGELKDGVCSPGGTTIAGVEALEKGGYRAAAMAAVAAATARSEELG 958
+ GFIG GMMASA++ GLV++KV P++I+ SD Y+PS + + G T SN++V A D +++AVKP+VV A + + + LV+SI AG+ + LE+LLP G RVVRVMPNTPC V EAA+ FA G AT DK V K+ GSVG EV E LDAVTGLSGSGPAY+F IEALADGGVR GL R VA++LAAQTV+GAA MVL TG+HPG+LKDGV SPGGTTIAGVEALE GG R ++AV AAT RS++LG
Sbjct: 1 MSNFGFIGAGMMASALMQGLVSNKVVDPSNISCSDPYEPSRKKASEQGFFATESNKEVCERAKDVVILAVKPNVVEAACSSVAAVESDA-------LVVSILAGVTLKTLEDLLP-GRRVVRVMPNTPCLVGEAASGFALGKLATPSDKGTVEKIFGSVGVAVEVTETNLDAVTGLSGSGPAYVFQFIEALADGGVRCGLTRPVAMQLAAQTVKGAAEMVLSTGKHPGQLKDGVTSPGGTTIAGVEALENGGLRGTTISAVKAATKRSKQLG 264
BLAST of mRNA_S-ischiensis_contig10.1664.1 vs. uniprot
Match: A0A2R5GIB7_9STRA (Pyrroline-5-carboxylate reductase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GIB7_9STRA) HSP 1 Score: 273 bits (698), Expect = 5.000e-86 Identity = 154/270 (57.04%), Postives = 192/270 (71.11%), Query Frame = 2
Query: 152 RLGFIGGGMMASAMVNGLVASKVAQPTDITVSDLYQPSLDRLAACGVNTTTSNQDVIGASDAIVIAVKPDVVPAVLEEIWEMANTEPPKGPVPLVISIAAGIPIAKLEELLPAGTRVVRVMPNTPCQVSEAAAAFAAGAHATDDDKALVAKLMGSVGYVCEVKEKQLDAVTGLSGSGPAYIFLLIEALADGGVRAGLPRAVALKLAAQTVRGAATMVLETGRHPGELKDGVCSPGGTTIAGVEALEKGGYRAAAMAAVAAATARSEELGK 961
R+GFIG GMMA+A++ G A V + S Q ++DR+ GV T N V+ SD I ++VKP V+P VLEEI + E LV+SIAAG+ I +E +LP G+R++RVMPNTPC V AA+A+ G HAT+DD ALV +LM +VG EK L+AVTGL+GSGPAY+FL+IEALADG VRAGLPRA+ALK+AAQ V+GAA M +ETG HPG LKD VCSPGGTTIAGVEALEKG +RA M+AV +A AR++EL K
Sbjct: 9 RVGFIGCGMMATALMAGFEAKGVVDVARMCGSCKSQCTVDRVGKLGVPVYTENVKVVAQSDVIFLSVKPYVLPHVLEEIRDTVTKEK------LVVSIAAGVTIGAMENVLPEGSRLIRVMPNTPCSVGAAASAYVKGTHATEDDMALVGELMTAVGLAIPCAEKDLNAVTGLTGSGPAYVFLMIEALADGAVRAGLPRAMALKMAAQMVKGAAQMAVETGLHPGVLKDQVCSPGGTTIAGVEALEKGNFRATVMSAVTSAKARADELSK 272 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig10.1664.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig10.1664.1 >prot_S-ischiensis_contig10.1664.1 ID=prot_S-ischiensis_contig10.1664.1|Name=mRNA_S-ischiensis_contig10.1664.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=324bp MLFAHSRSVARACFCTSIVHKLLPAPTRGTFAAAWKLPSVAMSSEGGGLGback to top mRNA from alignment at S-ischiensis_contig10:3591380..3597572- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig10.1664.1 ID=mRNA_S-ischiensis_contig10.1664.1|Name=mRNA_S-ischiensis_contig10.1664.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=6193bp|location=Sequence derived from alignment at S-ischiensis_contig10:3591380..3597572- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig10:3591380..3597572- >mRNA_S-ischiensis_contig10.1664.1 ID=mRNA_S-ischiensis_contig10.1664.1|Name=mRNA_S-ischiensis_contig10.1664.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1944bp|location=Sequence derived from alignment at S-ischiensis_contig10:3591380..3597572- (Schizocladia ischiensis KU_0333)back to top |