mRNA_S-ischiensis_contig10.1655.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig10.1655.1
Unique NamemRNA_S-ischiensis_contig10.1655.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
[Close]
BLAST of mRNA_S-ischiensis_contig10.1655.1 vs. uniprot
Match: D7FVD3_ECTSI (Protein phosphatase 2A regulatory subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVD3_ECTSI)

HSP 1 Score: 634 bits (1636), Expect = 8.840e-220
Identity = 437/584 (74.83%), Postives = 497/584 (85.10%), Query Frame = 3 
Query:  264 DLAGAAPLELLQEDMQATDQEIRLLAIKRVIMVADVLGPNKTRQDLLPYLGSILDDDDEILLSLADSLGKFVQAVGGKTHAPLLLPLLERLAETEETVVRAKAVESACTVIDSMAGGEEEALAMVKRLSVGDWFTARVSACGLYTAVYKRCTSPGDRAQLRTQFDALSKDTDAPMVRRGAALSIGELAGVVEGPALASDLLPVYKGLCGDEQDSVRLIAVEQAAQVASALNDQGQSGENATVVVPLIKAAVEDKSWRVRCAMARGMGKAAQAVGKDLTANELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHILHQLDALAEWMPAMADQVLPLVLELGQDIIWRVRRAVMVSVPLLTERMGVSYFEEHLLELYLQAYRDSVSEVRAGASEGLQRLCKVCGSDWLLEKVMPRMRVYYDESSFYLIRIAILNALKRLA-GEGSAGAVLISDVLELMLRAARDGIPNVRFTAVRALQEMAPSLDAGSLESQVRPCLTNLVQSDPDDDVKYYAGQALESIR 2012
            +L G +PL+LLQ+D +++DQEIRL A+KRV +VADVLGP  TR +L+P++ +I++DDDEILL+LA++LG+ V AVGG  HA LLLP LE LA  EETVVR KAVESAC VI  M GG++E   MV RLS GDWFTA+VSACGL+TA YK  +    RA LR QFD L+KDTD PMVRR  A ++G  AGVVEG  L SD++PV++ L  D+QD+VRL+AVEQA +VA AL DQ    E A  +VP+IK AVED+SWRVRCAMARG   AA AVG  LT  EL   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHIL QLD LAEWMPAMA+QVLPLVLELGQDIIWRVRRAVMVSVPLLTERMGV+YFEE+LLELYLQAYRDSV+EVR GASEGLQRLCKVCG+DWL EKV+PR+  +YDES+FYLIRIAILNALK+LA GEGSA +VL+ DVL+L+LR A D IPNVRFTAVRALQEMAP LDAG+++SQVRPCLT L+QSDPDDDVK+++ QALESIR
Sbjct:    3 ELGGTSPLQLLQDDFESSDQEIRLKALKRVKLVADVLGPEVTRSELIPFINTIVEDDDEILLALAEALGQLVPAVGGPGHAALLLPSLENLAAMEETVVRDKAVESACMVIGLMQGGQQEVADMVTRLSTGDWFTAKVSACGLFTAAYKHISEHDQRALLRGQFDVLAKDTDTPMVRRAVASNVGNFAGVVEGHLLLSDVVPVFEALASDDQDNVRLLAVEQAGKVAKALVDQQLEDECAPHIVPVIKRAVEDRSWRVRCAMARGFANAAHAVGPKLTTVELLPCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHILLQLDGLAEWMPAMAEQVLPLVLELGQDIIWRVRRAVMVSVPLLTERMGVNYFEENLLELYLQAYRDSVNEVRVGASEGLQRLCKVCGADWLQEKVLPRIHGFYDESTFYLIRIAILNALKKLANGEGSAASVLVGDVLQLVLRGAHDSIPNVRFTAVRALQEMAPHLDAGAVDSQVRPCLTELMQSDPDDDVKFFSAQALESIR 586
[Close]
BLAST of mRNA_S-ischiensis_contig10.1655.1 vs. uniprot
Match: A0A6V1NCY8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NCY8_HETAK)

HSP 1 Score: 414 bits (1064), Expect = 1.200e-133
Identity = 295/578 (51.04%), Postives = 404/578 (69.90%), Query Frame = 3 
Query:  279 APLELLQEDMQATDQEIRLLAIKRVIMVADVLGPNKTRQDLLPYLGSILDDDDEILLSLADSLGKFVQAVGGKTHAPLLLPLLERLAETEETVVRAKAVESACTVIDSMAGGE-EEALAMVKRLSVGDWFTARVSACGLYTAVYKRCTSPGDRAQLRTQFDALSKDTDAPMVRRGAALSIGELAGVVEGPALASDLLPVYKGLCGDEQDSVRLIAVEQAAQVASALNDQGQSGENATVVVPLIKAAVEDKSWRVRCAMARGMGKAAQAVGKDLTANELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHILHQLDALAEWMPAMADQVLPLVLELGQDIIWRVRRAVMVSVPLLTERMGVSYFEEHLLELYLQAYRDSVSEVRAGASEGLQRLCKVCGSDWLLEKVMPRMRVYYDESSFYLIRIAILNALKRLAGEGSAGAVLISDVLELMLRAARDGIPNVRFTAVRALQEMAPSLDAGSLESQVRPCLTNLVQSDPDDDVKYYAGQALESI 2009
            +P++LL++D+   DQE R+ A+KRV  +A  LGP + R++L+P+L    +DDDEILL LA+ LGKFV  VGG  +A  LL  LE+LAE EETVVR +A ES C V++ +   + EE   +VKRL+ GDWFTARVS+C L  A YK       +A++RT ++AL+KD + PMVRR AA  + + A  VE   + SDL           QDSVR++AV+    +A+ L   G   EN  VV+P+++ AVED+SWRVR A+ +   + ++A+G+ +T NEL                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     L IL +L+ +A WMPA+ + +LP++LEL  D  WRVR+AV+  +P+L E MGV YFE +LL+LYLQ+Y D V EVR GA+ GL ++  VCG+DWL ++V+PR++ +Y+ S+FYLIRI +++ALK LA +G +G+ L+++V+ ++++A  D  PNVRFT  +AL  ++   D  ++++Q+RPCLT L+Q+D D DVK++A QALE++
Sbjct:    6 SPMQLLEDDLYDEDQETRVKAMKRVSTIAAALGPEQAREELVPFLNGCTEDDDEILLVLAEELGKFVPLVGGPEYAGALLEPLEKLAEVEETVVRDRATESICHVVEVLPPDQSEEVFGLVKRLAHGDWFTARVSSCSLMAATYKAIVDTDQKAEIRTLYEALAKD-ETPMVRRAAAGKLADFAEAVEVGVVVSDLXXXXXXXXXXXQDSVRVLAVQATTLIATQLQKAGMEQENLAVVLPVVRHAVEDRSWRVRHAITKDFFEISEAMGQMVTTNELLQCFNNLIQDQEAEVRAASLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPEVRLRILSKLEVIAAWMPAIGENILPMLLELAHDANWRVRKAVVACLPVLAESMGVDYFETNLLDLYLQSYTDRVFEVRVGATSGLSKIATVCGADWLEKQVLPRIKYFYENSNFYLIRITVIDALKTLAQDGVSGS-LMTEVVNILVKACHDSTPNVRFTGAKALALVSGHADDVAVQTQIRPCLTELMQTDTDKDVKFFASQALETV 581
[Close]
BLAST of mRNA_S-ischiensis_contig10.1655.1 vs. uniprot
Match: A0A836CRQ9_9STRA (Protein phosphatase 2A regulatory subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRQ9_9STRA)

HSP 1 Score: 355 bits (910), Expect = 1.400e-109
Identity = 299/667 (44.83%), Postives = 374/667 (56.07%), Query Frame = 3 
Query:  279 APLELLQEDMQATDQEIRLLAIKRVIMVADVLGPNKTRQDLLPYLGSILDDDDEILLSLADSLGKFVQAVGGKTHAPLLLPLLERLAETEETVVRAKAVESACTVID-SMAGGEEEALAM--------------------------------------------------------VKRLSVGDWFTARV-------------SACGLYTAVYKRCTSPGD-RAQLRTQFDALSKDTDAPMVRRGAALSIGELAGVVEGPALASDLLPVYKGLCGDEQDSVRLIAVEQ-----------------AAQVASALNDQGQSGENATVVVPLIKAAVEDKSWRVRCAMARGMGKAAQAVGKDLTANELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHILHQLDALAEWMPAMADQVLPLVLELGQDIIWRVRRAVMVSVPLLTERMGVSYFEEHLLELYLQAYRDSVSEVRAGASEGLQRLCKVCGSDWLLEKVMPRMRVYYDESSFYLIRIAILNALKRLAGEG-SAGAVLISDVLELMLRAARDGIPNVRFTAVRALQEMAPSLDAGSLESQVRPCLTNLVQSDPDDDVKYYAGQALESIR 2012
            +PL+LLQ D  +TDQEIRL AIKR  +VA+V+G    R +L+PYL SI+DDDDE+LL++A+ LG FV  VGG  HA LLLP LE LA  +ETVVR  AV + C V+  S A   E + AM                                                        VKRL  GDWFT+R              SACGL+ A YK      D RA LR QF+A+SKD D PMVRR AA  +G+ AGV+E  AL  +L+P    L GDEQDSVRL+A EQ                 +A + +A+   G++ E AT+VVPL K A ED+SWRVR ++A+     A+++G  +   EL                                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    LHIL +L+ALA+ MPA+ADQ+LPLVLELG D IWRVR+AVM+S+P+L E++GV YFE+                                                   S+FYL RI IL ALK L G+G SA   L+++V+++ML  ARD IPNVRFTA RALQ++AP L+  +L++QV+PCLT + ++D D DVKY+A QAL +I+
Sbjct:   10 SPLQLLQGDFASTDQEIRLRAIKRARLVAEVMGAEAARDELVPYLTSIVDDDDEVLLAIAEQLGGFVPLVGGAAHASLLLPCLENLASVDETVVREMAVTATCDVLKASQASCAEASAAMYPVGPSVSPQGVAGELRGGVGGKRSTGVERTASYFKVQPHRLTTAIAPCCRCAHSQVKRLVAGDWFTSRXXXXXXXXXXXXXXSACGLFAATYKANIGLTDARAALRAQFEAMSKD-DTPMVRRAAAAHLGDFAGVLELDALCGELVPALTSLIGDEQDSVRLLAAEQLIGGGGXXXXXXXXXRQSAFMTAAMVTGGRANEAATLVVPLFKKAAEDRSWRVRHSVAKSYPTMAKSLGSAVFTRELVAPLNALLQDIEMEVRAQALKGSDMYVELMTPDTFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEVRLHILTKLEALADMMPAIADQLLPLVLELGHDNIWRVRKAVMLSIPMLAEKLGVHYFEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASTFYLHRITILCALKTLLGDGTSASQALVAEVVQMMLTGARDPIPNVRFTAARALQDVAPCLEDAALQAQVKPCLTEMAEADVDSDVKYFATQALLTIK 675
[Close]
BLAST of mRNA_S-ischiensis_contig10.1655.1 vs. uniprot
Match: F0WD27_9STRA (Serine/threonineprotein phosphatase 2A 65 kDa regulatory subunit A putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WD27_9STRA)

HSP 1 Score: 314 bits (805), Expect = 1.760e-95
Identity = 194/575 (33.74%), Postives = 300/575 (52.17%), Query Frame = 3 
Query:  282 PLELLQEDMQATDQEIRLLAIKRVIMVADVLGPNKTRQDLLPYLGSILDDDDEILLSLADSLGKFVQAVGGKTHAPLLLPLLERLAETEETVVRAKAVESACTVIDSMAGGEEEALAMVKRLSVGDWFTARVSACGLYTAVYKRCTSPGDRAQLRTQFDALSKDTDAPMVRRGAALSIGELAGVVEGPALASDLLPVYKGLCGDEQDSVRLIAVEQAAQVASALNDQGQSGENATVVVPLIKAAVEDKSWRVRCAMARGMGKAAQAVGKDLTANELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHILHQLDALAEWMPAMADQVLPLVLELGQDIIWRVRRAVMVSVPLLTERMGVSYFEEHLLELYLQAYRDSVSEVRAGASEGLQRLCKVCGSDWLLEKVMPRMRVYYDESSFYLIRIAILNALKRLAGEGSAGAVLISDVLELMLRAARDGIPNVRFTAVRALQEMAPSLDAGSLESQVRPCLTNLVQSDPDDDVKYYAGQALES 2006
            PL+LL EDM++ + E R+ +++++  VA  LG ++TR +L+P+L    D+DDEIL++LAD +G FV  VGG  HA +L+  LE LA  EETVVR +AV+S   VI ++    E  + ++KRL  GDWFT+RVSAC L+   Y R    G + Q+R  F     D + PMVRR AA +IG++A  VE   + + ++ ++K L  D+QDSVRL+A+E  A +A  L+ +    EN   ++P++K + ED+SWRVR ++A+      +A  +  +A  +                                                                                              L++L +++ LA WM +  D  LP + +L +D+ WRVR AV++S+P L   +G  YF+EHLL++YL AY D V EVR  A++                 V+PR+    ++S  Y  R+ +L+AL+++A E ++G  L++  + L +R A D IPNVRF A + L+E+    DA  + +QVRPCL  L+ +D D DVKYY+  AL++
Sbjct:    9 PLKLLMEDMKSDEAETRIKSMRKLKTVAQALGHDRTRCELIPFLRDSTDNDDEILVALADEVGDFVDLVGGPAHAAILVDPLEVLAGIEETVVRDRAVQSLQKVIKAVPNVGEVMVPLLKRLIEGDWFTSRVSACSLFAPTYSRLVDAGQKKQVRELFSVACND-ETPMVRRAAATNIGKVAANVEQEFVVTLIVQLFKALTSDDQDSVRLLAIENCAAIAELLSPE----ENQQHILPIVKTSAEDRSWRVRYSIAKDFFPDTEAEVRATSAKNIPGYITIVKFDLFNNEVMPLLSNLAQDTAPNVRTAVSISCMELAPKLGESASKISLSPMLLLFLRDEVVDVR-----------------------LNVLKRMENLAPWMSSFEDVFLPAIADLARDLQWRVREAVILSIPSLVGSLGTQYFQEHLLDIYLNAYTDMVGEVRLSATKIXXXXXXXXXXXXXXXXVLPRLTAILEKSIIYQERVNVLHALEQVASENASGE-LLNGSIALAIRGAHDKIPNVRFVASKTLKELCKHTDATVVATQVRPCLMELL-NDADTDVKYYSSVALDA 553
[Close]
BLAST of mRNA_S-ischiensis_contig10.1655.1 vs. uniprot
Match: A0A485KRI5_9STRA (Aste57867_10902 protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485KRI5_9STRA)

HSP 1 Score: 299 bits (765), Expect = 2.310e-89
Identity = 185/576 (32.12%), Postives = 287/576 (49.83%), Query Frame = 3 
Query:  282 PLELLQEDMQATDQEIRLLAIKRVIMVADVLGPNKTRQDLLPYLGSILDDDDEILLSLADSLGKFVQAVGGKTHAPLLLPLLERLAETEETVVRAKAVESACTVIDSMAGGEEEALAMVKRLSVGDWFTARVSACGLYTAVYKRCTSPGDRAQLRTQFDALSKDTDAPMVRRGAALSIGELAGVVEGPALASDLLPVYKGLCGDEQDSVRLIAVEQAAQVASALNDQGQSGENATVVVPLIKAAVEDKSWRVRCAMARGMGKAAQAVGKDLTANELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHILHQLDALAEWMPAMADQVLPLVLELGQDIIWRVRRAVMVSVPLLTERMGVSYFEEHLLELYLQAYRDSVSEVRAGASEGLQRLCKVCGSDWLLEKVMPRMRVYYDESSFYLIRIAILNALKRLAGEGSAGAVLISDVLELMLRAARDGIPNVRFTAVRALQEMAPSLDAGSLESQVRPCLTNLVQSDPDDDVKYYAGQALESI 2009
            P+ LL E+M+  + E R+ +++R+  VA  LGP +TR +LLP+L    DD+DE+L+++A+ LG FV  VGG + A +LL  LE LA  EETVVR KAV S   V+D +    E AL ++KRL+ GDWFT+RVSAC ++   Y +   P ++ +LR  F  L  D D PMVRR AAL+IG+    +E     S++LP                                        V P+++++ ED+SWRVR ++A+     AQA+G ++   EL                                                                                              L++L ++DA++ WM +    +LP + +L +D+ WRVR AV++++P L   +G +YF++HLLE++L A++D VSEVR   ++ L+ +  V GS+++LE ++P++   YD S  Y  R+ + +A+ +LA E  A   L+S++  L ++ A D IPNVRFT    L+ +        +  Q+R CLT L Q+D D DVK+YA  AL+S+
Sbjct:    7 PINLLTEEMRTDETETRIRSMRRLRTVAQALGPERTRSELLPFLSESTDDEDEVLVAMAEELGNFVDLVGGPSAASILLTPLEVLATVEETVVRDKAVASINKVLDVVTDAAELALPLIKRLTEGDWFTSRVSACWIFPVAYSK-VDPANKKELRDLFTTLCGD-DTPMVRRAAALNIGKFGAKIERDIFVSNILPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQH----VHPVVRSSCEDRSWRVRFSIAKDFFPLAQAMGPNIAEGELLHHFVQLLQDAEAEVRAAAAKNISGFAGLIKQSAFMGEIFPQIQPLSQDVAPNVRTAVSIVTMEIAPKLGEEVTKTSLIPILLQFLRDDVVDARLNVLKRMDAISPWMSSYESTLLPAITDLSKDLQWRVREAVVLALPSLVSTLGSAYFQQHLLEMFLNAFQDMVSEVRLSTTKILRDILDVVGSEYILESILPKLSKIYDSSITYQERVNVFHAIGQLASE-KASVELLSEMTSLSVKGAADKIPNVRFTVSNTLEVLGKCTANAGVLGQIRTCLTTL-QADSDPDVKFYASVALDSV 574
[Close]
BLAST of mRNA_S-ischiensis_contig10.1655.1 vs. uniprot
Match: A0A397DMQ9_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DMQ9_9STRA)

HSP 1 Score: 290 bits (742), Expect = 5.400e-86
Identity = 185/577 (32.06%), Postives = 295/577 (51.13%), Query Frame = 3 
Query:  282 PLELLQEDMQATDQEIRLLAIKRVIMVADVLGPNKTRQDLLPYLGSILDDDDEILLSLADSLGKFVQAVGGKTHAPLLLPLLERLAETEETVVRAKAVESACTVIDSMAGGEEEALAMVKRLSVGDWFTARVSACGLYTAVYKRCTSPGDRAQLRTQFDALSKDTDAPMVRRGAALSIGELAGVVEGPALASDLLPVYKGLCGDEQDSVRLIAVEQAAQVASALNDQGQSGENATVVVPLIKAAVEDKSWRVRCAMARGMGKAAQAVGKDLTANELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHILHQLDALAEWMPAMADQVLPLVLELGQDIIWRVRRAVMVSVPLLTERMGVSYFEEHLLELYLQAYRDSVSEVRAGASEGLQRLCKVCGSDWLLEKVMPRMRVYYDESSFYLIRIAILNALKRLAGEGSAGAVLISDVLELMLRAARDGIPNVRFTAVRALQEMAPSL-DAGSLESQVRPCLTNLVQSDPDDDVKYYAGQALESI 2009
            P+ LL E+M+  + E R+ +++R+  +A  LGP +TR +LLP+L    DD+DE+L+++A+ LG FV  VGG + A +LL  LE LA  EETVVR KAV S   V+D +    E AL ++KRL+ GDWFT+RVSAC ++   Y +   P ++ +LR    +LS             +   +    +E     S +LP++K L  D+QDSVRL+A+E  A +A  LN+     EN + ++P+++++ ED+SWRVR ++A+     A+A  +   A  +                                                                                              L++L ++D ++ WM +    +LP + +L +D+ WRVR AV++++P L   +G +YF++HLL+++L A++D VSEVR   ++ L+ +  V GSD++LE V+P++   Y+ S  Y  R+  L + K       A   L++++  L ++ A D IPNVRFT    L+ +  S  DA  LES +R  LT L Q+D D DVKYYA  AL+++
Sbjct:   41 PINLLTEEMRTDETETRIRSMRRLRTIAQALGPERTRSELLPFLNESTDDEDEVLVAMAEELGTFVDLVGGPSAASVLLTTLEVLATAEETVVRDKAVASINKVLDVVTDAAELALPLIKRLTEGDWFTSRVSACWIFPVAYSK-VDPANKKELREYVRSLSSSESI--------ICAHKFGAKIERDIFVSTILPLFKSLTVDDQDSVRLLAIENCAVIAKLLNED----ENLSHILPVVRSSCEDRSWRVRFSIAKDFFPDAEAEVRAAAAKNISGFAGLVKQSSFMAEIFPQLQPLSQDVAPNVRTAVSIVTMEIAPKLGEDVTKTSLIPILLQFLRDDVVDAR-----------------------LNVLKRMDNISPWMSSYESTLLPAITDLSKDLQWRVREAVILALPSLVTTLGAAYFQQHLLDMFLNAFQDMVSEVRLSTTKILRDILDVVGSDYVLESVLPKLSKIYENSVTYQERVNQLASAK-------ASVQLLTELTALSVKGASDKIPNVRFTVSTTLEVLGKSTTDAAVLES-IRTSLTAL-QADADPDVKYYASVALDTV 572
[Close]
BLAST of mRNA_S-ischiensis_contig10.1655.1 vs. uniprot
Match: A0A067CSS0_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CSS0_SAPPC)

HSP 1 Score: 268 bits (684), Expect = 1.580e-77
Identity = 184/576 (31.94%), Postives = 278/576 (48.26%), Query Frame = 3 
Query:  282 PLELLQEDMQATDQEIRLLAIKRVIMVADVLGPNKTRQDLLPYLGSILDDDDEILLSLADSLGKFVQAVGGKTHAPLLLPLLERLAETEETVVRAKAVESACTVIDSMAGGEEEALAMVKRLSVGDWFTARVSACGLYTAVYKRCTSPGDRAQLRTQFDALSKDTDAPMVRRGAALSIGELAGVVEGPALASDLLPVYKGLCGDEQDSVRLIAVEQAAQVASALNDQGQSGENATVVVPLIKAAVEDKSWRVRCAMARGMGKAAQAVGKDLTANELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHILHQLDALAEWMPAMADQVLPLVLELGQDIIWRVRRAVMVSVPLLTERMGVSYFEEHLLELYLQAYRDSVSEVRAGASEGLQRLCKVCGSDWLLEKVMPRMRVYYDESSFYLIRIAILNALKRLAGEGSAGAVLISDVLELMLRAARDGIPNVRFTAVRALQEMAPSLDAGSLESQVRPCLTNLVQSDPDDDVKYYAGQALESI 2009
            P+ LL E+M+  + E R+ +++R+  VA  LGP++TR +LLP+L    DD+DE+L+++A+ LG+FV  VGG + A +LL  LE LA  EETVVR KAV S   V++ +    E AL +VKRL+ GDWFT+RVSAC L+     R T    R+   T +  L  D D PMVRR AAL+IG+    +E     S +LP++                                                     +    A+     A+A+G  +   EL              XXXXXXX                                                                         L++L ++ A++ WM +    +LP + +L +D+ WRVR AV++++P L   +G +YF+EHLLE++L A++D VSEVR   ++ LQ +  V GS+++LE ++P++   YD S  Y  R+ + +AL +LA + ++   LI ++  L +R A D IPNVRFT    L+ +    D  +L  Q++ CL +L Q+D D DVKY+A  ALES+
Sbjct:    7 PINLLTEEMRTDETETRIRSMRRLRTVAQALGPDRTRSELLPFLSQSTDDEDEVLVAMAEELGEFVDLVGGPSSASVLLGPLEVLATVEETVVRDKAVASIQKVLEVVTDAGELALPLVKRLTEGDWFTSRVSACWLFPVRTPRWTLGARRSSASTLYTTLCGD-DTPMVRRAAALNIGKFGAKMEKDIFVSTILPLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSI----AKDFFPLAEAMGASIAEGELLHHFVQLIQDAEAEXXXXXXXNISGFASLIKLNTFMAEVFPQIQPLSQDVAPNVRTAVSIVCMEIAPKLGEDVTKASLVPIMLQFLRDDVVDVRLNVLKRMSAVSPWMHSFEGTLLPAITDLSKDLQWRVREAVILALPSLVSSLGATYFQEHLLEMFLNAFQDMVSEVRLSTTKILQEILHVVGSEYILESILPKLAQIYDSSIIYQERVNVFHALTQLACDKTSPD-LIGEMTTLSIRGANDKIPNVRFTVTNTLEVLGKHTDNPALTGQIKSCLAHL-QTDTDPDVKYFASAALESV 575
[Close]
BLAST of mRNA_S-ischiensis_contig10.1655.1 vs. uniprot
Match: A0A484E7S2_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E7S2_BRELC)

HSP 1 Score: 263 bits (672), Expect = 9.780e-76
Identity = 236/578 (40.83%), Postives = 332/578 (57.44%), Query Frame = 3 
Query:  282 PLELLQEDMQATDQEIRLLAIKRVIMVADVLGPNKTRQDLLPYL-GSILDDDDEILLSLADSLGKFVQAVGGKTHAPLLLPLLERLAETEETVVRAKAVESACTVIDSMAGGEEEALAMVKRLSVGDWFTARVSACGLYTAVYKRCTSPGDRAQLRTQFDALSKDTDAPMVRRGAALSIGELAGVVEGPALASDLLPVYKGLCGDEQDSVRLIAVEQAAQVASALNDQGQSGENATVVVPLIKAAVEDKSWRVRCAMARGMGKAAQAVGKDLTANELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHILHQLDALAEWMPAMADQVLPLVLELGQDIIWRVRRAVMVSVPLLTERMGVSYFEEHLLELYLQAYRDSVSEVRAGASEGLQRLCKVCGSDWLLEKVMPRMRVYYDESSFYLIRIAILNALKRLAGEGSAGAVLISDVLELMLRAARDGIPNVRFTAVRALQEMAPSLDAGSLESQVRPCLTNLVQSDPDDDVKYYAGQALESIR 2012
            P+ LL+E++++ +   R+ A++R+  VA  LGP++TR DLLP+L     DDDDE+L++LAD LG FV  VGG  HA  L+  LE LA  EETVVR +AV S   V+  +    +  + + KRL+ GDWFT+RVS C L+ ++Y + T  G + +LR  ++ + +D D PMVRR AA +IG  AG +E   +AS +LP+++ L                                                                           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                    L+IL +++ LA+WM +    +LP + +L +D+ WRVR AV++S+P L+  +G  YF+EHLLE+Y+ A+ D V EVR  A++ L +L +  GSD++L+ VMPR+   +D+S  Y  R+ +L+ALK++A E S+   L++ ++ L +R A D IPNVRF A   L+++    DA  + SQVRPCLT +V +D D DVK+Y+  AL++++
Sbjct:   11 PMTLLREELKSDEVGTRIKAMRRLRTVAQALGPDRTRSDLLPFLRAEATDDDDEVLVALADELGGFVDLVGGAEHAAALVKPLEVLAAVEETVVRDRAVASFQKVVAVVPNVGDVMVPLAKRLAEGDWFTSRVSVCSLFASIYAKVTDAGRKKELRDLYEKMCED-DTPMVRRAAASNIGNFAGAMEIEHIASLILPLFRILTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVACMELAPHLGEATSKSTLAPLLLLFLRDEVVDVRLNILKRMELLAQWMASFESVLLPAIADLARDLQWRVREAVVLSIPALSGSLGGQYFQEHLLEIYVSAFTDMVGEVRLSATKILPKLLESLGSDFILQNVMPRLNQIFDKSVIYQERVNVLHALKQMAVEKSSSD-LLAHLMTLAIRGAHDKIPNVRFVASMTLEQLCKLADASVVASQVRPCLTEMV-NDSDMDVKFYSSIALDAVQ 581
[Close]
BLAST of mRNA_S-ischiensis_contig10.1655.1 vs. uniprot
Match: H3GD06_PHYRM (Uncharacterized protein n=17 Tax=Phytophthora TaxID=4783 RepID=H3GD06_PHYRM)

HSP 1 Score: 262 bits (670), Expect = 1.690e-75
Identity = 232/577 (40.21%), Postives = 326/577 (56.50%), Query Frame = 3 
Query:  282 PLELLQEDMQATDQEIRLLAIKRVIMVADVLGPNKTRQDLLPYLGSILDDDDEILLSLADSLGKFVQAVGGKTHAPLLLPLLERLAETEETVVRAKAVESACTVIDSMAGGEEEALAMVKRLSVGDWFTARVSACGLYTAVYKRCTSPGDRAQLRTQFDALSKDTDAPMVRRGAALSIGELAGVVEGPALASDLLPVYKGLCGDEQDSVRLIAVEQAAQVASALNDQGQSGENATVVVPLIKAAVEDKSWRVRCAMARGMGKAAQAVGKDLTANELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHILHQLDALAEWMPAMADQVLPLVLELGQDIIWRVRRAVMVSVPLLTERMGVSYFEEHLLELYLQAYRDSVSEVRAGASEGLQRLCKVCGSDWLLEKVMPRMRVYYDESSFYLIRIAILNALKRLAGEGSAGAVLISDVLELMLRAARDGIPNVRFTAVRALQEMAPSLDAGSLESQVRPCLTNLVQSDPDDDVKYYAGQALESIR 2012
            P+ LL E++++ + E R+ A++R+  VA  LGP +TR DLLP+L    +D+DE+L++LA+ LG FV  VGG  HA  L+  LE LA  EETVVR +AVES   V   +    +  + + KRL+ GDWFT+RVS C L+ A+Y +    G + +LR  +  +  D D PMVRR AA +IG+ A  +E   ++S +LP+++ L                                                                           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                    L+IL +++ LA+WM +    +LP + +L +D+ WRVR AV++S+P L   +G  YF+EHLLE+Y+ ++ D V EVR  A++ L +L +  GSD++L+ VMPR+   +D+S  Y  R+ +L+ALK+++ E    + L++ ++ L +R A D IPNVRF A   L+++    DA  + +QVRPCLT LV SD D DVKYY+  AL++++
Sbjct:    7 PMTLLTEELKSDEVETRIKAMRRLRTVAQALGPERTRSDLLPFLREATEDEDEVLVALAEELGGFVDLVGGDEHAATLMEPLEVLAAVEETVVRDRAVESLQKVAAVVPNAGDVMVPLAKRLAEGDWFTSRVSVCSLFAAIYSKVADAGRKKELRDFYQMMCND-DTPMVRRAAAANIGKFAAAMEKEHISSLILPLFRSLTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIACMELAPKLGEATSKSTLAPLLLLFLRDEVVDVRLNILKRMELLAQWMASFESVLLPAIADLARDLQWRVREAVILSIPALAGSLGDQYFQEHLLEIYVSSFTDMVGEVRLSATKILPKLLESLGSDYILQNVMPRLNQIFDKSVIYQERVNVLHALKQMSVE-KVSSDLLTLMMTLAIRGAHDKIPNVRFVASMTLKQLCKFADASVVATQVRPCLTELV-SDSDMDVKYYSSIALDAVQ 576
[Close]
BLAST of mRNA_S-ischiensis_contig10.1655.1 vs. uniprot
Match: A0A8K1CK45_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CK45_PYTOL)

HSP 1 Score: 260 bits (665), Expect = 9.180e-75
Identity = 238/577 (41.25%), Postives = 322/577 (55.81%), Query Frame = 3 
Query:  282 PLELLQEDMQATDQEIRLLAIKRVIMVADVLGPNKTRQDLLPYLGSILDDDDEILLSLADSLGKFVQAVGGKTHAPLLLPLLERLAETEETVVRAKAVESACTVIDSMAGGEEEALAMVKRLSVGDWFTARVSACGLYTAVYKRCTSPGDRAQLRTQFDALSKDTDAPMVRRGAALSIGELAGVVEGPALASDLLPVYKGLCGDEQDSVRLIAVEQAAQVASALNDQGQSGENATVVVPLIKAAVEDKSWRVRCAMARGMGKAAQAVGKDLTANELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHILHQLDALAEWMPAMADQVLPLVLELGQDIIWRVRRAVMVSVPLLTERMGVSYFEEHLLELYLQAYRDSVSEVRAGASEGLQRLCKVCGSDWLLEKVMPRMRVYYDESSFYLIRIAILNALKRLAGEGSAGAVLISDVLELMLRAARDGIPNVRFTAVRALQEMAPSLDAGSLESQVRPCLTNLVQSDPDDDVKYYAGQALESIR 2012
            PL LL E++++ + E R+ A++R+  VA  LG ++TR +LLP+L    +D+DE+L++LAD LG FV+ VGG  HA +LL  LE LA  EETVVR +AV+S   V   +    +    +VKRL+ GDWFT+RVSAC L+ AVY + T  G R +LR  F  +S D D PMVRR AA +IG+ A  VE   L   +LP+                                                                               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                     L+IL +L  LA WM +    +LP + +L +D+ WRVR AV++S+P +   +G  YF+EHLLE+Y+ A+ D V EVR  A++ L +L +  GS+++L+ V+PR+   +D+S  Y  R+ +L+AL++LA +  A   L++ +  L +R ARD IPNVRF A   LQ++    D+  + SQVRPCL +LV +D D DVKYY+  A+E+ +
Sbjct:    8 PLALLTEEVKSDEVETRIKAMRRLKTVAQALGTDRTRTELLPFLREATEDEDEVLVALADELGGFVELVGGPQHAAVLLEPLEVLAGIEETVVRDRAVDSLLKVATVVPNVGDSFAPLVKRLAEGDWFTSRVSACSLFAAVYPKITDAGRRKELRDLFQVMSND-DTPMVRRAAASNIGKFAAAVEKEHLTGLVLPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSIAAMELAPKLGEAGAKNTLGPLLLLFLRDEVVDVRLNILKRLGLLAPWMSSFESVLLPAIADLARDLQWRVREAVILSIPAVASSLGNQYFQEHLLEIYMSAFSDMVGEVRLSATKILSQLLESVGSEYILQNVLPRLTQIFDKSVIYQERVNVLHALEQLATD-KASNELLATMTTLAIRGARDKIPNVRFVASITLQQLCKYADSSIVASQVRPCLADLV-NDSDTDVKYYSSVAMEAAQ 577
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig10.1655.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVD3_ECTSI8.840e-22074.83Protein phosphatase 2A regulatory subunit n=2 Tax=... [more]
A0A6V1NCY8_HETAK1.200e-13351.04Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A836CRQ9_9STRA1.400e-10944.83Protein phosphatase 2A regulatory subunit n=1 Tax=... [more]
F0WD27_9STRA1.760e-9533.74Serine/threonineprotein phosphatase 2A 65 kDa regu... [more]
A0A485KRI5_9STRA2.310e-8932.12Aste57867_10902 protein n=2 Tax=Aphanomyces TaxID=... [more]
A0A397DMQ9_9STRA5.400e-8632.06Uncharacterized protein n=6 Tax=Aphanomyces astaci... [more]
A0A067CSS0_SAPPC1.580e-7731.94Uncharacterized protein n=4 Tax=Saprolegniaceae Ta... [more]
A0A484E7S2_BRELC9.780e-7640.83Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
H3GD06_PHYRM1.690e-7540.21Uncharacterized protein n=17 Tax=Phytophthora TaxI... [more]
A0A8K1CK45_PYTOL9.180e-7541.25Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig10contigS-ischiensis_contig10:3524691..3540831 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score636.3
Seed ortholog evalue1.4e-179
Seed eggNOG ortholog2880.D7FVD3
KEGG koko:K03456
KEGG Pathwayko03015,ko04071,ko04111,ko04113,ko04114,ko04151,ko04152,ko04261,ko04350,ko04390,ko04391,ko04530,ko04728,ko04730,ko05142,ko05160,ko05165,map03015,map04071,map04111,map04113,map04114,map04151,map04152,map04261,map04350,map04390,map04391,map04530,map04728,map04730,map05142,map05160,map05165
EggNOG free text desc.meiotic spindle elongation
EggNOG OGsKOG0211@1,KOG0211@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01009,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProtein phosphatase 2A regulatory subunit A
Ec32 orthologEc-14_000690.1
Exons15
Model size2015
Cds size1761
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig10.1655.1prot_S-ischiensis_contig10.1655.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig10 3524691..3540577 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815544.297562-CDS-S-ischiensis_contig10:3524690..35247801622815544.297562-CDS-S-ischiensis_contig10:3524690..3524780Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3524691..3524780 -
1695739759.9863768-CDS-S-ischiensis_contig10:3524690..35247801695739759.9863768-CDS-S-ischiensis_contig10:3524690..3524780Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3524691..3524780 -
1622815544.3115103-CDS-S-ischiensis_contig10:3525508..35256551622815544.3115103-CDS-S-ischiensis_contig10:3525508..3525655Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3525509..3525655 -
1695739759.9982574-CDS-S-ischiensis_contig10:3525508..35256551695739759.9982574-CDS-S-ischiensis_contig10:3525508..3525655Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3525509..3525655 -
1622815544.329699-CDS-S-ischiensis_contig10:3526251..35263741622815544.329699-CDS-S-ischiensis_contig10:3526251..3526374Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3526252..3526374 -
1695739760.0094883-CDS-S-ischiensis_contig10:3526251..35263741695739760.0094883-CDS-S-ischiensis_contig10:3526251..3526374Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3526252..3526374 -
1622815544.342108-CDS-S-ischiensis_contig10:3526913..35269791622815544.342108-CDS-S-ischiensis_contig10:3526913..3526979Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3526914..3526979 -
1695739760.0203457-CDS-S-ischiensis_contig10:3526913..35269791695739760.0203457-CDS-S-ischiensis_contig10:3526913..3526979Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3526914..3526979 -
1622815544.3544154-CDS-S-ischiensis_contig10:3528031..35281691622815544.3544154-CDS-S-ischiensis_contig10:3528031..3528169Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3528032..3528169 -
1695739760.029069-CDS-S-ischiensis_contig10:3528031..35281691695739760.029069-CDS-S-ischiensis_contig10:3528031..3528169Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3528032..3528169 -
1622815544.364752-CDS-S-ischiensis_contig10:3528721..35287871622815544.364752-CDS-S-ischiensis_contig10:3528721..3528787Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3528722..3528787 -
1695739760.0376797-CDS-S-ischiensis_contig10:3528721..35287871695739760.0376797-CDS-S-ischiensis_contig10:3528721..3528787Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3528722..3528787 -
1622815544.374841-CDS-S-ischiensis_contig10:3529864..35299841622815544.374841-CDS-S-ischiensis_contig10:3529864..3529984Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3529865..3529984 -
1695739760.0485785-CDS-S-ischiensis_contig10:3529864..35299841695739760.0485785-CDS-S-ischiensis_contig10:3529864..3529984Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3529865..3529984 -
1622815544.3858106-CDS-S-ischiensis_contig10:3531149..35312881622815544.3858106-CDS-S-ischiensis_contig10:3531149..3531288Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3531150..3531288 -
1695739760.060486-CDS-S-ischiensis_contig10:3531149..35312881695739760.060486-CDS-S-ischiensis_contig10:3531149..3531288Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3531150..3531288 -
1622815544.3980873-CDS-S-ischiensis_contig10:3532057..35322211622815544.3980873-CDS-S-ischiensis_contig10:3532057..3532221Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3532058..3532221 -
1695739760.0693095-CDS-S-ischiensis_contig10:3532057..35322211695739760.0693095-CDS-S-ischiensis_contig10:3532057..3532221Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3532058..3532221 -
1622815544.420427-CDS-S-ischiensis_contig10:3533265..35334751622815544.420427-CDS-S-ischiensis_contig10:3533265..3533475Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3533266..3533475 -
1695739760.077736-CDS-S-ischiensis_contig10:3533265..35334751695739760.077736-CDS-S-ischiensis_contig10:3533265..3533475Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3533266..3533475 -
1622815544.4357505-CDS-S-ischiensis_contig10:3534787..35349161622815544.4357505-CDS-S-ischiensis_contig10:3534787..3534916Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3534788..3534916 -
1695739760.0863688-CDS-S-ischiensis_contig10:3534787..35349161695739760.0863688-CDS-S-ischiensis_contig10:3534787..3534916Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3534788..3534916 -
1622815544.448481-CDS-S-ischiensis_contig10:3538393..35384931622815544.448481-CDS-S-ischiensis_contig10:3538393..3538493Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3538394..3538493 -
1695739760.094889-CDS-S-ischiensis_contig10:3538393..35384931695739760.094889-CDS-S-ischiensis_contig10:3538393..3538493Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3538394..3538493 -
1622815544.4628787-CDS-S-ischiensis_contig10:3539024..35391301622815544.4628787-CDS-S-ischiensis_contig10:3539024..3539130Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3539025..3539130 -
1695739760.1034784-CDS-S-ischiensis_contig10:3539024..35391301695739760.1034784-CDS-S-ischiensis_contig10:3539024..3539130Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3539025..3539130 -
1622815544.4733803-CDS-S-ischiensis_contig10:3540289..35404481622815544.4733803-CDS-S-ischiensis_contig10:3540289..3540448Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3540290..3540448 -
1695739760.11197-CDS-S-ischiensis_contig10:3540289..35404481695739760.11197-CDS-S-ischiensis_contig10:3540289..3540448Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3540290..3540448 -
1622815544.486563-CDS-S-ischiensis_contig10:3540573..35405771622815544.486563-CDS-S-ischiensis_contig10:3540573..3540577Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3540574..3540577 -
1695739760.122513-CDS-S-ischiensis_contig10:3540573..35405771695739760.122513-CDS-S-ischiensis_contig10:3540573..3540577Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3540574..3540577 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815544.4993558-UTR-S-ischiensis_contig10:3540577..35408311622815544.4993558-UTR-S-ischiensis_contig10:3540577..3540831Schizocladia ischiensis KU_0333UTRS-ischiensis_contig10 3540578..3540831 -
1695739760.1323822-UTR-S-ischiensis_contig10:3540577..35408311695739760.1323822-UTR-S-ischiensis_contig10:3540577..3540831Schizocladia ischiensis KU_0333UTRS-ischiensis_contig10 3540578..3540831 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig10.1655.1

>prot_S-ischiensis_contig10.1655.1 ID=prot_S-ischiensis_contig10.1655.1|Name=mRNA_S-ischiensis_contig10.1655.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=587bp
MAVDLAGAAPLELLQEDMQATDQEIRLLAIKRVIMVADVLGPNKTRQDLL
PYLGSILDDDDEILLSLADSLGKFVQAVGGKTHAPLLLPLLERLAETEET
VVRAKAVESACTVIDSMAGGEEEALAMVKRLSVGDWFTARVSACGLYTAV
YKRCTSPGDRAQLRTQFDALSKDTDAPMVRRGAALSIGELAGVVEGPALA
SDLLPVYKGLCGDEQDSVRLIAVEQAAQVASALNDQGQSGENATVVVPLI
KAAVEDKSWRVRCAMARGMGKAAQAVGKDLTANELVPCLASLLQDHETEV
RASTIKDMTGYVDLVGASTFASQVMPYVLALLRDVNLNVRIALSDTCMKL
APKLGYDSTMNSILPMLLAFLRDESAEVRLHILHQLDALAEWMPAMADQV
LPLVLELGQDIIWRVRRAVMVSVPLLTERMGVSYFEEHLLELYLQAYRDS
VSEVRAGASEGLQRLCKVCGSDWLLEKVMPRMRVYYDESSFYLIRIAILN
ALKRLAGEGSAGAVLISDVLELMLRAARDGIPNVRFTAVRALQEMAPSLD
AGSLESQVRPCLTNLVQSDPDDDVKYYAGQALESIR*
back to top

mRNA from alignment at S-ischiensis_contig10:3524691..3540831-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig10.1655.1 ID=mRNA_S-ischiensis_contig10.1655.1|Name=mRNA_S-ischiensis_contig10.1655.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=16141bp|location=Sequence derived from alignment at S-ischiensis_contig10:3524691..3540831- (Schizocladia ischiensis KU_0333)
GCGAAGTCTTCACCCTAATACAATAGGGCCGTGGTGGAACTGCAGAAGGA
GAGCTTGCAGGCTGTGGCGCAGGGGGAAGAGGGGAAGCACCTGTGGGTTT
TTCATACCAGTGTACTGGCAGGGGTTGCTTTGGCAGGAGTCGGCAATGGT
GAGGTACTGAGGAGCCCGCTCAGGGGAGACAACTGGGCGGCGGACTGCAG
CCACCAGGCAGCGGGGGGCGGGTGCCGCCCCCACTAGCCGCCACAGGACG
CATAATGGGTGAGTCTCATCAGCAGCAAGACTGGGACGATTCCAACCATT
GACTTTGCATGGCCGTTATTACCCAGTGGGGAGGTCCGACGCTCACCCCC
GATCACCCCCACCCGCCGCCCGTCCGGGAGCAGCGGTCGACTTGGCAGGG
GCGGCGCCCCTGGAGCTACTGCAGGAGGATATGCAAGCAACGGACCAGGA
GATTCGTCTGCTCGCAATCAAGCGGGTTATCATGGTGGCGGACGTGCTTG
GCCCAAACAAGACACGCCAGGACTTGCTGCCGTACCTTGGCTGTGAGTCC
GTACAGGGTCACCTGGGTCTCTGACAGTGATGTACGCGGCAACCCACTCA
TGATGACCTAGACGTTCTCTCAGTATTTTGCCGCAAGCCGTACGTTTAGG
CAGCGTGCCCATTCCCGCCCCGTTTTACAGAGAGCTCCCCCTGCCCCCCA
AGCACGGATTTTGCAAATAGTTTTCAAGCCCATTTGCCGATGCAAGAGCC
AGAGCAAAGCCCGGCATTGACCCAGTTTCACTCCCTCGGTCTAGTGAACG
AAAGGGACCCTGAGGAAAAGAGCAAAAAAAGAAAAAAAGGCCACGGGCAA
CTTTTTCTCCTTCTCGAGCATTCAAAGCTGTTTTCGCCGAAGGGGGCAGT
GTTGCAAGCGGTCCTGTTCTTCAGGCCAACTACGACATGTCTTGGAGGGA
GTCTTTGTGCACTGTCACGGTGATAGGCCATGATGCACGCGAACTTCGGA
TGCTCTTTTCGGTAGTTCTTGCCTGACAGGCAGTTAGTCATGGGTAGTTT
GCTATGCGCTAGTGACACGCTTGCTTTGCGGCTACCGGAACGGATTTTGT
TTGCGGGGGAAATCAGCGGTCCGTTCCATGGGTGGGACGCGAGGTGTGCT
TGTTCGCAACTCCTCGGGGAGCATTTTGGTGTCCCCGTTCGTTGCCGGTG
CACAGCGACAGGACAACACCCAGCATACTTATCTCAACCCTTGCAACGCA
GATTTGGCGTGCGGTGCACGCCGACTTGGAGAACCGTTGAGCAGGCACAC
CAGTCGCTTCTCTCCCTCTCCCTTGTTTCGGCAATACCGGGCGGGCGCGA
ACGGCCCCTCGGCGGAAATAATGGGACTTCTTGCCTGAAGTTTTTTTTAT
TCCCGCCCCCGCTGTTTGCCTGCCGGTGTGTGGTTCTGTTTTGCAATAGG
CTCGCTTTGCGCATGGGCCTGCCTGTGTGCGCAAAGTGAAGCTGGAACCA
ATAGAGCCCGCCCTCTGAAACAGGGGGAGAGGAGACAGCAATAGCCACGG
GAGGGCTTCCTTCCCTGGGCGGCTTCTGTCATGTTGACGTGATGCTTGCT
TGGACACATCCCGTGCACAGCCGGCACGTCTGCCCTGCTTGAACCCCCCC
TCTCGCACCCCGCTCCGCGCTTTCTTGCCGCGGCGGGATGTTTCCTTGCA
GCCATCTTGGACGACGACGACGAGATCCTCCTCTCTCTGGCCGACTCTCT
CGGAAAATTCGTTCAGGCCGTGGGGGGGAAGACGCACGCGCCCCTGCTCT
TGCCTTTGTGAGTGGCGGCTCGGGGGAGGCCCGGCCGGGCCCGGGCGTCC
TGTGGTAGTGGTGGTGGTGGTGTATGCTTGTGCTTGACGTGCTAGCTGTG
GGAGCAGAACGTACTTCCCAGAGCGCTCCCCGCCTGTCTGTTTCCCCCGT
CTCCCTACTCTGTGTACATTCCGCCACTGTCACACGCTCTCTCTCTCTCT
CTCTCTCTTCCTCTCTCTCTCTCTCTCTCGTTGAGCGCCGTTTTTGTTGT
ATGTGTCGACCTCCTCGCTCGCCACACGGCACACCTCGCCTGCCCTCCCA
GCACACACACACATATAACTATACTTCGAAGTACTACAGTAGTACATTCG
CCATCGGCCAGGGACGGGTAGCGCCTTTGTTTTAGGACAACTAGCTTCTC
GTACTTGTAGCGTGATAATAGCACTTGGATACGGCAACTCATGAGCGACC
CCCCCCCCCCCTGGTCCCCGGCCGCGCACGGCATTTATTAAAAAAACGCC
GGGGTTTGTTTGTTCGGCCGTGGCATCCATGCGAGCAGACTGGAAAGGTT
GGCGGAGACGGAGGAGACGGTGGTGCGAGCAAAAGCCGTGGAGTCTGCCT
GCACGGTGATCGATTCCATGGCCGGGGGGGAGGAGGAGGTGAGACGACTG
GTTTGTCCTGTGCACCGTGGGCTTGGCAAAGTGTTATATTTTAGGTAGTG
CAATAGGTATTATTACGAGCAGTTCGTGCCACAGAAGCAACCAGTTGTAA
AAGGCCGAAAAAAACTTTCTTTTGGGGGGGTCGATACACAACAACCCAAG
AAGGCAGCGGTTGATCCCCCCCCCCCTTCCCCCCCCCCGGTCGCTTCTAT
CACGCAGCTCCCATCTCCAGGGCGATTGCGTAGTCCCTGTCCTGTCCGAT
CTTGACCGAAATCATCCGTCCGATGCCGGAACTGTTTGTGCATGTTCAAA
GCCCGAAACTGTAGCCTACTGTACACGGTCTGTAAGTGCAGGACAGTACA
GTAGTTCCGTTCTGCAACATATACACACTCGAGTATATTCAATAGCACAT
CCACCCGCGCTGTAAGTGTATATACACACTCGAGTATATTCAATAGCACA
TCCACCCGCGCTGTAGTGTTGCTGTAGTGTAGAGTGGTGGGGTCAATGGA
CTCGGGACTTCGGCAGGCACAATGTGAGTACGTATACCCCCCTTGATATC
GACCCCCCCCCATGGATGGCAACCCCCCCAAAATCCGGTCCCGGTTAGGG
CCGAATTTACCGACCGTGTTACGTTAGATATCGACCCCCCCCCCGGATAC
CGACGGGGTCGGTATTTTGTGGCGCCGTAAATATTGTCGACCGGGGGTCG
TTATCTTCCGTCGCTTACGGTACAGTACACACGCAAGTACGGGCATATGT
ATATACGACTACTTCGAAGTACCCCCACTGCACTGTACATGGAATCTACT
TCGAAGTAGGTACTGCAGCAGCAGACAGGTGGTCATGCAGCGCTTGTGCC
GCGAAGTGGTTGCTGTTTTTTTGCCCGTGTTGGCCAGCACATCCAGCACA
TGGGTTACGTGATCCGTAACGTTCGCGGGTTTGTGTCGACGCCGGGGGCT
TACTCGTTCGTGTCGTTGACTTCCACTGCTCGGCAGTACCGTATCCCGGT
ACCCCCCCCCCGCTATTGTGTATATGTACTCACATGGTGCTTGCCATAGT
CCCGAGACCATTGACCCCGCGCCTCGTGCGAGACAGAGCAGGATACGAGT
ACTATTGAACAGCACATTTTTTCTGCTTGATAACGGCTGTTTCCGCCACG
GAAAGCTGTGTACAGTAGTAGCAGCGCCGTCTCGGCTACCCTCACAGTAA
TGTGTACGAGTACGTATGCGCACCCCAAGTTTTCACTTGTTGCTTTGAAC
TAAGCACACAAGGTTCTGTCGCAAGGCAAGCCAATTAGTACGTACTGTAC
ATATATTTACTCGAGTACAGTACTTGCACTCCCGGCACTTCACAAAGTAT
ATAGGGTCAAAGGTCTCGGGACTACGGCAAGCACCACGCGAGTATATTTA
TACTCGTATATAATATATATATAGGGTCAATGGTCTCGGGACTACAGCAA
GCACCACGTGGGTACATATATATATATACAGGACATGTGTGGCGGGAGGG
AGATTGCTGCGCCCTCGACGGCCCGTGGTCAAGCTCTCTGACTTTGAAAT
GAAATCTCCTACGTACTTGGATTCTTGACGTGAAGTCTCCTAGCTGTACT
TGGCCCCGCACCTCGCCCCGTGTTGTTCCTGATAGTACTTGGATTTCTTG
AAATGAAGTCTGCTAATAGTACTAGTAACTACTTGGGTTTTGTGAGACTC
CGTTCTCCTGACTATCGTACTTGGAAGTTTTGCACAAAATGGTATATGGA
CTACGGCAAGCACACGTGAGCATACAGGTGTATGTATACTTGTGTGTGGG
TCAATGGTCTCGGGACTACGGCAGGCACAGCGTGAGTACACACACATACG
TATATGTGTGTGCGTGCACTGCATATGCTTGCTCCCATGGTACTCCCCGT
AGGTATCCCCAAGGCTGCCGACCACGCGCCCTCTGCGAAGACCCCAACAC
CTACAGCATGGTATTTATATATGTACTCACGTGGTGCTTGCCGTAGTCCC
GAGACCATTGACCCCGCGCCTCGTTCGAGACGGAGCAGGTCCCCTCCCTC
CCCTGGCAGAGCCAGGGTGGGAGGGGGTGGCCACTCCCCCGCCAGAGGCG
GAGGGGCGGCCAAGTCCATACATGCATGGTATCTATATATATGTATTCAC
ATGGTGCGGGAAAAAATGTCCCGGCCTACAATATGTACGAGTGCAGTAGT
CAGTTTTCGGTATTTTCGGTGATGACAGAAGTTGTGCCGCCCATTGCTCC
GCTGTTTTTCGCGCGTGGTCAATGGTCTCTGGACTACGGCGAGCACGGCC
TGAGTAGTTATTGTAGTGGCACAAACAGGACCATTTTTGGCTAACATTTA
TTGGAGTAAACAAGCTTCTTCCCGCACCAGTTTCTGGGACTGAACTACAC
AAACTGCATGGACTTTCTGACTAAATTTGCTCCTATTCTATGGATTTTTT
GAAGTGCTAGCCGCATTATACATATATGTACTCATGTGGTGCTTGCCGTA
GTCCCGATTGCCAGTAAAATATACGTGAGTACATTCGTTAACGGTATATA
CAGCCTCCCAGGCAGTGAAAAAAACGCGGCTTCGGTTGCACGGGCCTGCT
TTTGAGGTAGTTGCCGAATACGTTTTGCCCCCCAGAGCTGATTTGCAGAC
AATTTGGACAATTTGCTCGCCCGAAGCCACTCGGAATAAATCCCCCCGGC
CCGGGCCTACCGTCCTGGGACTCGTTGGCCCGAGGGTAATCGAAGTCGCC
CGAAAGGTGACACTGGCACAACAGAACAATACAAGTTCTTCGGAAGTACA
TACACATCAGTACAGTAAGTGTCAGTGATGGAATATCGACCCGATTTATT
ATATAGGTAGTATATCGACAAATATATCGATATAACGACTTTGTTATATA
TATTGATATATCGACATAGTGGTATTATAGCCCATACTAAAACCAAGTAG
TGTCTTCCACGGAGGCGTTTGCCCAGGTCGTCGCTGGCGCTCGACGCTAT
TAATAGGAACACATCAGTCGATATAACGTCAATATATGCGGCGATCGTTA
TATCTGTTCGACATAATGTTTGTTATATGCACGGGGTCAATGGTCTCGGG
ACTACGGCAAGCACCACGTGAGTACATATATATATATATATATATATATA
TATACCCGGGTATATTTTAGTATTCGATTTTCCACCACTGGCAACTGTTG
CCAGACGACCCCCGTCGTGATCTTTCCCGGCCTAGGCAGAGCTGTGAACA
GTAAGTGCCTGCTCCGCCTCGCACGAGGCGCGGGGTCAATGGTCTCGGGA
CTACGGCAAGCACCACGTGAGTACATGTATATGTAGTGTAGCAGTATTCC
GTATACCACATACGAGTACACTTGCAGCGGCCGGATGTAGGTGCCGCAAG
CGACCGACGAGTCCCCCCCCTCCCCTCCCCTCCGCTCCCCTCCCCTCTTC
CCCGGGGCCTGGCAGGCGTTGGCCATGGTGAAGCGGCTGAGTGTGGGGGA
CTGGTTCACGGCGCGTGTGTCGGCGTGCGGCCTCTACACCGCCGTCTACA
AGCGGTGCACCAGCCCGGGGGACCGGGCACAGCTGCGCACGCAGGTGCGT
GTGGGCAGAGAATGCTCTTCATTTTTTTTCTTTTTACGCGCCCGCGCCGC
AAGGTGGCGGTCTCTTTTTATCGCTCGTGTTGCCCTGTGGGCTGGGTGCG
CTGTACGGTACAGTAGTTGTGTACGGTGTCGCAAGCCCGTGCCGTGTAAG
TAATGATTTGTTCGAGGCTTTTCGGGCCGTTCAGATTCGCGGTACTGTAC
TTACGTAGTATCTGCGCTATAAATAGGTACATACATAGTCAGCTACAGCA
CTTACAGCGTTTGTTCTCGGAGAGCCCTACCTGCATGACTCCCATCAGAG
CGGGTGGCTGCTCCATCCCATTCTCGGAGTAGTTGTGACTGATAGTCTCC
GGGCTCCCAAGCCAGGCTCTACGTTGCACAGTGCAGTAGTTACTTGGAAG
TGCATGTGCTGTGCTGTACCGTACTACAGTACTGTAAGTGAGTATTACAA
GGAACAACACGGGGCAAGGTGTGGGCCACGTCACTAGAGACCTCAGCAGT
GGCCCTTCCTTGGCTCGCCAGGGGAAATTTGTGCGGGGAAGGGGAGAAGA
GGAGGGGGGGGGCAGGGAGGAGGGGGAGAAGGAGGAGGAGAAGTACACGT
GTAGGTAAGCCCCCCTCTCCCTCCCCAACATGCCGGCCCCTCCCCTCTTC
TCCGCAACCCCTTCGCCCTTTGCGCCCACCCTCCCCTCTGACCCCGTCGT
GCCAAACCGCAAAGGCTACTTACGACAAGCACGCACACACACACACATGC
ATGTACTTCGTACAAGTATATATGTACTCACACTGTCCTTGCCGTAGTCC
CGAGACCATTGACCACGCGCCGGAGCAGTCTCCCTCCCGCCCCTGGCAAG
CCAGGGTGGGGGGGAGGGACCACCCCCCCGCTCATGGCGGGGGAGTGGTT
GGGTCCATACTCCCCCCTCGCCTGACTCGTGAGAGTCAGGGCGGGGGCGG
GTTCCTCCCCTGCCGGACCGAGGTTCGCACAAATACGTACTCAAGCTGTG
CTGGCCGTAGTCCCCAGACCATTGACCTTGTGCGCCCGAGACTCAAGTAC
TCGTACGAGTGCGTACATTGACTCACAATGCTCCTTCTCCTTCCTTCCGC
ACCGCTCCCACGGAGCGAGCGGCCGTAGCCCGCCTCCCCAATGACAGAGG
AAAAGGCGCTACCCCCCACGACCGGTCCATTCCTACAGGACGCCCCGGTG
TTTAATGGCCGTACGGCTGCGACAACCGACTCGTATTTGCAAGTGCACCC
CCTCTCGCCCCCTGCCCCCCCATCCCACCGCCGCCGCCGCTGCCGCCGCC
GCCCAGTTTGACGCGCTTTCCAAGGACACCGACGCACCCATGGTGCGGCG
GGGGGCGGCGCTCAGCATCGGGGAGCTGGCGGGGGTGGTGGAGGGGCCGG
CCCTGGCCTCGGACCTGTTGCCGGTGTACAAGGGCCTGTGCGGGGACGAG
CAGGACAGCGTGCGCCTCATTGCGGTCGAGCAGGCGGCCCAGGTGGCGTC
CGCGCTCAACGACCAGGTTGGTGTGCGCTGTACTCGAGTGTATGTGTGGC
CGTTGGATTGGCGTATGCAGGGGCTGGGCCAGGGGCCGGCGATCCAGGTG
GAGAAGGAGGAGGAGAAGGAGACTGTCAGTGGGTCGCCAGTCGGTGGCAA
GCACAGCAATAGCGATTCGTCCGATATGAGTACATACACGCACATGTGTG
TGTGTGTTGGGGGTGCGTGAGTGCATTGCGCGCTCGCGTGTGTGCACGCG
TGCCTGCATCCGTGCATGCGTGCATGCGTGTATGTGTGCGTGTACGTGCT
GGTGTGTACAGCGTGGTGTGTGTGCGCCCGCGCGGTATGGGGGCTGCTGT
GGGGGTGTGATTTTGCGGGGGCGAGGGGGGGAGACCGATATCCTTGTTTA
ATCTCTTGTTTATTTGTGAGTATTTTTGTGGATTGTTATCGATGGCATGC
GAGTTCCGGGCCCTGTCCCAAACTGGGGCCCTCACCAGAAGAGGTAGCCC
TTGTTTCACTCGCAGGGCACATAGCACCTGGCAAAAAAGAAGGCAACACG
CAGGGGGAACGCACGGGCAAACAAACCATTTTGGTTTGCGGACACTCACA
ATCTCCATCCTTGTTTTCTTTTTTTCTGCTCTGTATGCCCTGCGAGTGAA
GGCAAGTGAAAGGAAGGGCTTCCGGGGGTGGGGCCCTCAACTCGCGTATG
TAGGGACACCTCTCTTTCCCACTCGCTTGTTTGTCTTGTTAAAAAAAAAC
TGATATCCGTGCCGGCGCTGAGTGCACATGGGTCGCGCGGCAACGTGTCA
ATGGTGGGGTTGATAGATGCATGGGCCGCGTGCATGCACACACACACACA
GACACACACACGCTCATGCACGCGCGCGCACACACACACACACACACAGA
CAGACACACACACGCTCATGCAAGCGCGCGCACACACACGTGCATGCAAG
AGGCGGGTGTACACACCCACGCTCATGCCTAGCAATTGTGTACTTCGAAG
TACAAGCAGCAAGAAGCGTCTGAGTACGTACCTGCCCTACCCAACACGTC
GCCGGCGCAGGGCCAGTCGGGCGAAAACGCCACGGTGGTGGTGCCTCTCA
TCAAGGCGGCGGTGGAGGACAAGAGCTGGAGAGTCCGCTGCGCCATGGCC
CGGGGCATGGGCAAGGCTGCCCAGGCTGTGGGTAAAGACCTCACCGCCAA
TGAGCTTGTTCCATGCCTGGCCAGGTGCGGAATTGTTTTTTTTTTTTTTC
CGACACGCCTCTTGGGTGAATGTTTGTCGAAGAATGTGTGTATCATGAAG
TGCTGTAGGCACATCGGTCGACGGATGACATGCCAGCACCATCGTGCCAC
GTATGTACGAGCACACTCTGCTTTGCTTTTTCGTGCCACGTACTGTAGGT
GCTCTGCTTGTGCTCAACTGTACGTGGTTTCCCAAGTAGTTCGTAGTGCT
CGCGCACTTGAAGCATGTGCTGCACATACACGCACGTGCTCCAAGCATCA
TACACGTACTCCCTAGGCTGTACACGAGTACTACAGTAGTGCTACTACTT
CCCAAGTACTCGTACATCCACTACTGTAGCACCGTCATCGTCGGAGAGGT
CTTGCCCTCCCATGCCGAACTTCGCGAGGACATTTCTTCCCGAATACTGG
TCGGATTCACACGGGAAAACTGTGGAAAATTCCCTCAGGGCCGGGAGGAA
TTAGTCCGAGGGATTTCAGGACAACTCAGAACCTACCCCGCACGAAATTG
TGCCCCAAGAATTGTCCCAGGGGGACAAGATATCTCCTACGATTGCGGTA
TGTACTACTACTACAGGTACTTGCAAGCACATGCGCGAGCTGTACCTCGG
CGTGACCTAACCCATCACATCCTCGGTCAGTCGCGCCCCACCTCCCCGCC
CTCATGCCACGCATGCGCCGGGGCCCGTGTGCCCTTTGTGCGCGCGTTCG
TGCGCGCGCGTGCGTGTGTGTGTGCCGTGTTTTTGGCAAACAGCCTGCTG
CAGGATCATGAGACGGAGGTGCGGGCGTCAACCATCAAGGACATGACTGG
GTATGTGGACCTGGTGGGGGCGTCAACGTTCGCGTCACAGGTCATGCCGT
ACGTGCTGGCTCTGCTAAGGGACGTTAACCTGGTGCGTGCGTGCTTTTGC
CTCCGGCGGTCGCGGTGGTTGTGGTGGTGGTGGTGGCGGCGGGGGTGGTC
GTGGTGGTGGTGGCGGTGGCTGTGGCTGCGGTTGTTGTGTGTTTGTTCTG
TGTCTGTTGCTGCTGCTGCTGCTGCTGCTGATGGCAATGATGTTTGCTCT
TGCTGTTGTTGGTCGTGGCTGTTGTTGTTGTTGTTGTTGTTGGTACTGTT
GTCAGTGGCGCTGGCGTTTGTCACCCTGTTGCTTTGGGAAGCGGTGCTGC
TGCTGCTGCTGCATGTATGCTTGCCGCTCTGGCACACCGCATCACTTCGC
TTTTTCGCAAGTCAATGTACGGGTACAGCTGTGCTTGCTTCCCGGAAGTA
CTTGGTACTTAGGAAGTGTATCGTACTCCCAAGCATCATGATACGTAGTA
TATCTCGGGACTATCGCAAGCGCAGCGCACGTATGTAGTAGCACAAATAT
GTACTCATGGGCTTGAAATAGTTGTCAATTGTCTTGCGACCCAAGGGTTA
ACCTTGCATGCTTCGAGTAGTTGACAGCCCTACGCCAAAACTTCGGGTTT
GCCCACATGGCCCAAGTACCACAGTATATGCTGTACTGCAGCTGTATTAT
ACAGAAGTCCAAGTACTGCAGTGCTCGTTGGCCAAGGTGGGCTAGTGCCT
ACATGTGTAGAGCTTCCCGCTCCCGCGCCGACACTCGCGTTATTTGTACA
TATTGCGCTGGAGCGGGTAGGAAACATAGATGGGTATCTTGGATCTCCCC
CCGCCGTGTCCCGGCACGGTGAGGGAACCCCCTCCCCCGCTAGGTCTCGG
TCTAGCAGGGGAGGGCCCCCCCCCACCCGGACTGTCACGAGTCGGGGAAG
GGGGAGGTATGGACCTGGCCAGCCCTCCGCCTCTGGCGGGGGGGTGGCCA
CCCCCTCCCACCCTGGCTATGCCAGGGGAAGGAGGGGTCCTTCTCCGTCT
CGAACGAGGCGCGTGGTCAATGGTCTCGGGACTACGGCAAGCACCACGTG
AGTACATATATATATATATGTATTGCGCTCCACATGAGTACATATATATA
TATGTATTGCACTTGCTTGATTTTGTGTTTTGTTTTCTTTGATGTTCACC
CACTGTCCTCTGTCTCGCCGGTGCCGGGGGGGGGGGGGTTCGGGCAGAAC
GTCCGCATCGCGCTGTCGGACACGTGCATGAAGCTGGCGCCCAAGCTGGG
CTACGACAGCACTATGAACTCCATCCTGCCCATGCTGCTCGCGTTCCTCC
GGGACGAGTCGGCCGAGGTATGTGTGTGACAGGACTTTGTACTGTGCTCT
GTAGTCTTAGCACAGGTTACCAATGCCGACAGTCTATGCTCTGTAGTTCT
AGAGTACGGTGGCATGCACAGGACGGGGTGTCTCCTGTCCAACACGAGCA
CACACACAGTACAGTGCAGTAGTGCTGTACTCCTAAGTGCTTCCAGTACG
TACATACTCTACAGTAGCTACGAAGCACAGTACAGTACCTTAGTGCCGAC
CGTAGTAGGGCACAACAGCAAGTGGGGGCTGCCGTAGTTAGTACTCGAGT
ATGTACTGTAGTTAGTTGCCTCAAAGTGCCCCACAGTAGCACCTATGTGC
TTCCAAGCACTGCACTGCAGCAGGTAGTCCGTACATACTGCTATGCACTC
GGTCGAGTGCACGCCGCTCACGAACTGCTATTTGCCGAGTATGCGGCGCT
GTACTTGCTTGGGAAGCTCTGTACCAGTACTCGTAGAGTGCAGCAGCACC
AACAGTAGGACTCATAGTGGGGCGGGGTGAGTAGGCGCAAGCGGGTTCTT
CCATGTGCCTCAGTGCTTGCGAGCACGTACTGTACTGTACTGTACTGTGC
TGTACTGTACTGTACTCTACTCTACTCTACTGTACTGTACTGTACTATAG
TACATGTACGTGTAGGTGTACGTGGTGGCTCGCCGTGGGGGTACACGACT
GCCCGCCAAGCGCGCCCGCACGTCACGCCCCACTCCTCTTCCGTGGTTGT
TGTTGTTGTTGTTGTTGTTGTCGCCTTTTGTGCGCGTGTTGTACGCATCC
ACCGTGTTGTGTGTGTGTGTGCGTGTGTGTGTGTGTGCGTGCGCGTGTGT
GTGTGTGCGCGCGCGTGTGTGTGTGCGTGTGTGTGTGTGTGTGCGTGCGT
GCGTGCGTGACTCCAGGTGCGCCTGCGCATCCTTCGCTGGCTCCTGGATT
GGATGCTCTGATCGATGTGTTGTGTGCCGATACACCCGATACGTTTGCCG
CCAATCCGCGTGCTTCTTCGGCGTGTTTCCTATCTTGTCTCTAAATCGGG
GTATCTATTCTGATGCTCTACCATGTGCCGACGCTTGCCTCCAGGTGCGG
CTACACATCCTTCACCAGCTGGACGCTCTGGCAGAGTGGATGCCTGCCAT
GGCGGATCAGGTGATTTGGCTTTTTTGCTTTTCACGGCGCTGCGGTTTCT
TTTTTTTGCTCTCGCAACGTTTCCACGCCCATGTGTTGCAGCACAGTACT
CGTAGAGCTCTACTGAGCTCTACTGTACTTGGTTGCGTTGTGCTTGCTGT
ACAGTACAACTAGGACAATCACAGTGGTCGTGAGACCGTCGACCACTATA
GCACCCCTCGCCCAACTAAGTGCTTATAGACGGAGCAACCCCCCCCCCCA
CCCCTGGCAGAGCCTGAGTGGAAGGGTGAGGCCACTTATCCACAGTGCAG
GGAGGTTGCCACAGGTCTATGTGCTCCCCCCCGCGTCTATGACTCGTGAG
AGTCAGGTCCCCCCCTTTCCAGGCCTAGGCCCAGTGCCAGCAGGACAGAG
GGCCCCCCCACCATGCCGTGGCAAGCCTTCTCACCTGTGTACTACGGTAG
TGTAGTACTTTGTACTTACTGTAATTCACCTACTATGCTTGCGGGGGGCC
TGGGCTCGCTCTCTTGTTGCGGCGCCTCTGTTTTGTGTGTGTGCGTGTTG
GGGGGGTTCCAGGTGCTCCCGCTGGTGTTGGAGCTGGGGCAGGACATCAT
CTGGCGTGTGCGGCGGGCGGTGATGGTGAGCGTGCCGCTGCTGACGGAAC
GCATGGGCGTGTCCTACTTCGAGGAGCACTTGCTGGAGCTCTATCTGCAG
GTGAGTACAAGCAGTGGTAGAAATCTCCTCGCCAAACTATAGGGTCTTCA
GTATCGGGAAATGTGTGTACAGAACGCGTTAACTTTTAGTATACCGGACT
GTTTTGGGGGTTGGGTTTGGTTTAATAGGGGTATTGGTTGGGTGGGTGCG
GGTCGGGTACCCAATGGTAAAATCGTCGTCCGCATCGATCGGGCCTATCG
GATCGGCCCCTCGCTCGCTCGTTCGCTCGGAATCGGCCGTTTGTTATTTT
CGAGACCTCCGTGCAAGGCGTTCAGGGCGCCCGGGTGCAGTACAAAATCG
GCCGAAAACCATTTGACTAGAAGGACATCTCCAGATACTGAAGACCCTAT
AGTTTGGCGATGCGTTTGTAACACACCTCGCAGGTGTGTGTGTGTGTGTG
TGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGGTGC
GTAGCAAATGCTTTCGGTTTTGTTTCCGGCGCGTTTAGCCAACGGGGTGG
GGGTTTCAACACCTTAGCAACCACTTCCTGGCAGACAGCGCTACACACAT
TGTACAGTACCTGCCCCCTCTCGGTCGAGCGAGGCGCTGTATAGGGGTCG
AACGGTCTCGGGACTGCCGTATGCACTGTTCGGTGTGAGCACAGTACATA
GGTATACACAGCACGTACACAGCAGTGCTTGAAGCTGTAGAGTAGTAACC
AAGGAGTAAACCCCCCGCACCCCGCTCTCCACGCACCGATTTGCGGGTTG
TGGGAGGGAAGGTCCGCCGTTGACCTCCCGGGCAGGGGCGTGGCCAGCAC
CTTGCATCTTGTTTTCACCCTGCTCTAGTATTAGCAGGAGCAACACGGGG
CGAGGTGCGGGCCACGTCACTTAAGACCTCAGCAGTGGCCCTTCCTTATA
GCTCGCCAGGGGAAATTTGTGTGGGGAAGGGGAGAAGAGGCAGTAGTACA
GTAGTAGGAATCCCAACATGCTTGTGTCCCTCCCCAGGCGGGCGCGAGCG
CCTCACCGTGCCCCCCCGCCGTGCAACTGCCTCCCGGACGCGCGCCTGGC
AGGCGTACCGGGACAGCGTGAGCGAGGTCCGGGCGGGGGCGTCCGAGGGC
CTGCAGCGTCTGTGCAAGGTGCGGTCTTGTTTTTTGCGAATCTTGGTCAC
GACGCGAGGCGTGGGTGCCGCGACGGGAGTGTTGTACTTGCAAGTACCGT
GCAGTATAGTAGAGTGGAGGAGGCCTTTTCGCGGCGCTTTTTTTTTGGCC
TTTTCGCGGCGCTTTTTTTTTTTTTTTTTTTTTTTTCGGAGCGGGAGTTG
GGTGTGAGCTTTGCTTGTCTTCTTTGCAGAAACTGGTTACTGGTTTTGCC
TGCCCAATATCAACGAGCACACCCAACATCAAGCAGGTTTTTTGCAGTTT
ACCTCGTTGTCACTATTTGGTTCTCTACTGTGACAATGGCGGCGTAGAGA
AAGGGTCCTGTCAGAACGACGGGGAACGCCGTTTGAGTAACCTGTGTTCT
CACAGGTCCCACCCTGAGCGCCGCCTCCTCCCTCGTTTCTTAAACGAAAC
AACTACTAGCACGAGAACAGTCAATCGCACACACACGCGATTGTACCTCG
TTACAATTTATATGAATCACCCCTCATTTCCCCTGGCGCACGCCGCCGGG
CCCCCAGGTGTGCGGGTCGGACTGGCTGCTGGAGAAGGTGATGCCGCGCA
TGCGCGTCTACTACGACGAGTCCTCCTTCTACCTCATCCGCATCGCCATC
CTCAACGCGCTCAAGAGGCTCGCGGGGGAGGTAGGTGGGGTCGGGGGTGT
TTGGCGTGGTGTCACCTCCTCTCTGTCGCGCGTGAACGCGCGAACGCATG
CACGCACGCATGTGCACAGCCACCGCTCGCTGTGTGTAGTGTGCCGTTTC
GGTTTCGATCGACCCCAAGACCGCGCCCGTGTTGGTGGCGCTGACAGCAA
ACGCTGGCGGCTAACTTGTCGTTGCTTCCAGGGAGAAGAATGCAGGCTTG
GGCTTGTTTGTGCTCCTCTCTGCAGGGCTTCCCCGCCGCACATTTTACCC
CCTGCCCTCCCCGCCTCCTCTTGATCTATTCGTATTCAATCACGTAGGTA
CTCGAGTATGTGGAGAACATGAGGTTTGACCACGTTCCGAAACAGGCCCC
CAGTGGCCCGGCACCGCCGGTTTGTTTTACTGTGCGCACGATTGCGACTT
TGCACATGGGCGTGTTTAGCGCGTGTTTTTGTCTCCTCTTCCTCCTCCTC
CTCCTCCTCCTCTCCCAGGATCGGACAAGGAAACTCCGCCTCCCTCCCTC
CCTCACTCCCTCCCTCCCTCCCCCCACACCCGCTTAAACACCCCCCTTTC
GCCCCTACCTTACCCCCCCTTCTCAGGGAAGTGCCGGGGCAGTCCTCATC
TCAGACGTCCTGGAGCTCATGCTGAGGGCTGCACGTGACGGGATCCCCAA
CGTACGCTTCACGGCCGTGCGCGCTCTTCAGGAGATGGCCCCCAGTCTCG
ACGCAGGGTCGCTGGAGTCTCAGGTGTCCCCCCCCCCCCTGCGCGAGCGC
GCCCTTCTTGCCACGATCAGCCGTGCCGCTCCACCGGCGCGCGGAAATGT
GCCCCTTCCCTGGACAATGAATGAACGGTCCTATGGCATGGCGATCAAGT
ACTTTGGCAGTACTTGGAAGTAATTTTGTACTCTACGCCCCGGGGCCGTA
GAGTCCCCCTATCAGTTGCACCCCCCTTTCCGTTCCCTCTTTCCGCGAGT
TTTCGGTCCGCTCGACACCTCTTGGCTGGTTTTCACTCGCTTGCGCAAGG
GTTGGCTTGACTGGTGATAGCCCAAATCGCGTCGTCGACCTTTTCTTGCC
CTGCCCCGCCCCGCCCCGCCCCATTGTTTTCCTACACGCACGCACTCCAT
ACGTGGAGCACTGGGAGTACAGTACCGTACAGTACACGTGTGCTGTACGG
GGACACGTACTGTGCTGTACTGTACTGTACTGTACACCCTGCACTTGAGA
GTACTCACCCGACGATCACGCACCTAGCTCTACATGCAGACGAACACACG
CGCGGGCACACCGATGCACCCCCTCCCTCACACGCACACCCCTATACACG
CATGTACGCATGCACGCGCAGTTCGATCTGGCAGGGCCTCCCCGTGCTCT
GTTCCCCGTGCCCCGCCCCGACTCTCCACGGGACTGACGCGCCTGCCCGC
GCCTCATCTTTTTTGTTGGTTGGCGTTCGTCCCGTCCTCGCGGCTCGGCA
GGTCCGGCCATGCCTCACCAACCTGGTCCAGTCGGACCCTGACGACGATG
TCAAGTACTACGCCGGCCAGGCGCTCGAGAGCATCCGCTGA
back to top

Coding sequence (CDS) from alignment at S-ischiensis_contig10:3524691..3540831-

>mRNA_S-ischiensis_contig10.1655.1 ID=mRNA_S-ischiensis_contig10.1655.1|Name=mRNA_S-ischiensis_contig10.1655.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=3522bp|location=Sequence derived from alignment at S-ischiensis_contig10:3524691..3540831- (Schizocladia ischiensis KU_0333)
ATGGATGGCGGTCGACTTGGCAGGGGCGGCGCCCCTGGAGCTACTGCAGG
AGGATATGCAAGCAACGGACCAGGAGATTCGTCTGCTCGCAATCAAGCGG
GTTATCATGGTGGCGGACGTGCTTGGCCCAAACAAGACACGCCAGGACTT
GCTGCCGTACCTTGGCTCGGTCGACTTGGCAGGGGCGGCGCCCCTGGAGC
TACTGCAGGAGGATATGCAAGCAACGGACCAGGAGATTCGTCTGCTCGCA
ATCAAGCGGGTTATCATGGTGGCGGACGTGCTTGGCCCAAACAAGACACG
CCAGGACTTGCTGCCGTACCTTGGCTCCATCTTGGACGACGACGACGAGA
TCCTCCTCTCTCTGGCCGACTCTCTCGGAAAATTCGTTCAGGCCGTGGGG
GGGAAGACGCACGCGCCCCTGCTCTTGCCTTTCCATCTTGGACGACGACG
ACGAGATCCTCCTCTCTCTGGCCGACTCTCTCGGAAAATTCGTTCAGGCC
GTGGGGGGGAAGACGCACGCGCCCCTGCTCTTGCCTTTACTGGAAAGGTT
GGCGGAGACGGAGGAGACGGTGGTGCGAGCAAAAGCCGTGGAGTCTGCCT
GCACGGTGATCGATTCCATGGCCGGGGGGGAGGAGGAGACTGGAAAGGTT
GGCGGAGACGGAGGAGACGGTGGTGCGAGCAAAAGCCGTGGAGTCTGCCT
GCACGGTGATCGATTCCATGGCCGGGGGGGAGGAGGAGGCGTTGGCCATG
GTGAAGCGGCTGAGTGTGGGGGACTGGTTCACGGCGCGTGTGTCGGCGTG
CGGCCTCTACACCGCCGTCTACAAGCGGTGCACCAGCCCGGGGGACCGGG
CACAGCTGCGCACGCAGGCGTTGGCCATGGTGAAGCGGCTGAGTGTGGGG
GACTGGTTCACGGCGCGTGTGTCGGCGTGCGGCCTCTACACCGCCGTCTA
CAAGCGGTGCACCAGCCCGGGGGACCGGGCACAGCTGCGCACGCAGTTTG
ACGCGCTTTCCAAGGACACCGACGCACCCATGGTGCGGCGGGGGGCGGCG
CTCAGCATCGGGGAGCTGGCGGGGGTGGTGGAGGGGCCGGCCCTGGCCTC
GGACCTGTTGCCGGTGTACAAGGGCCTGTGCGGGGACGAGCAGGACAGCG
TGCGCCTCATTGCGGTCGAGCAGGCGGCCCAGGTGGCGTCCGCGCTCAAC
GACCAGTTTGACGCGCTTTCCAAGGACACCGACGCACCCATGGTGCGGCG
GGGGGCGGCGCTCAGCATCGGGGAGCTGGCGGGGGTGGTGGAGGGGCCGG
CCCTGGCCTCGGACCTGTTGCCGGTGTACAAGGGCCTGTGCGGGGACGAG
CAGGACAGCGTGCGCCTCATTGCGGTCGAGCAGGCGGCCCAGGTGGCGTC
CGCGCTCAACGACCAGGGCCAGTCGGGCGAAAACGCCACGGTGGTGGTGC
CTCTCATCAAGGCGGCGGTGGAGGACAAGAGCTGGAGAGTCCGCTGCGCC
ATGGCCCGGGGCATGGGCAAGGCTGCCCAGGCTGTGGGTAAAGACCTCAC
CGCCAATGAGCTTGTTCCATGCCTGGCCAGGGCCAGTCGGGCGAAAACGC
CACGGTGGTGGTGCCTCTCATCAAGGCGGCGGTGGAGGACAAGAGCTGGA
GAGTCCGCTGCGCCATGGCCCGGGGCATGGGCAAGGCTGCCCAGGCTGTG
GGTAAAGACCTCACCGCCAATGAGCTTGTTCCATGCCTGGCCAGCCTGCT
GCAGGATCATGAGACGGAGGTGCGGGCGTCAACCATCAAGGACATGACTG
GGTATGTGGACCTGGTGGGGGCGTCAACGTTCGCGTCACAGGTCATGCCG
TACGTGCTGGCTCTGCTAAGGGACGTTAACCTGCCTGCTGCAGGATCATG
AGACGGAGGTGCGGGCGTCAACCATCAAGGACATGACTGGGTATGTGGAC
CTGGTGGGGGCGTCAACGTTCGCGTCACAGGTCATGCCGTACGTGCTGGC
TCTGCTAAGGGACGTTAACCTGAACGTCCGCATCGCGCTGTCGGACACGT
GCATGAAGCTGGCGCCCAAGCTGGGCTACGACAGCACTATGAACTCCATC
CTGCCCATGCTGCTCGCGTTCCTCCGGGACGAGTCGGCCGAGAACGTCCG
CATCGCGCTGTCGGACACGTGCATGAAGCTGGCGCCCAAGCTGGGCTACG
ACAGCACTATGAACTCCATCCTGCCCATGCTGCTCGCGTTCCTCCGGGAC
GAGTCGGCCGAGGTGCGGCTACACATCCTTCACCAGCTGGACGCTCTGGC
AGAGTGGATGCCTGCCATGGCGGATCAGGTGCGGCTACACATCCTTCACC
AGCTGGACGCTCTGGCAGAGTGGATGCCTGCCATGGCGGATCAGGTGCTC
CCGCTGGTGTTGGAGCTGGGGCAGGACATCATCTGGCGTGTGCGGCGGGC
GGTGATGGTGAGCGTGCCGCTGCTGACGGAACGCATGGGCGTGTCCTACT
TCGAGGAGCACTTGCTGGAGCTCTATCTGCAGGTGCTCCCGCTGGTGTTG
GAGCTGGGGCAGGACATCATCTGGCGTGTGCGGCGGGCGGTGATGGTGAG
CGTGCCGCTGCTGACGGAACGCATGGGCGTGTCCTACTTCGAGGAGCACT
TGCTGGAGCTCTATCTGCAGGCGTACCGGGACAGCGTGAGCGAGGTCCGG
GCGGGGGCGTCCGAGGGCCTGCAGCGTCTGTGCAAGGCGTACCGGGACAG
CGTGAGCGAGGTCCGGGCGGGGGCGTCCGAGGGCCTGCAGCGTCTGTGCA
AGGTGTGCGGGTCGGACTGGCTGCTGGAGAAGGTGATGCCGCGCATGCGC
GTCTACTACGACGAGTCCTCCTTCTACCTCATCCGCATCGCCATCCTCAA
CGCGCTCAAGAGGCTCGCGGGGGAGGTGTGCGGGTCGGACTGGCTGCTGG
AGAAGGTGATGCCGCGCATGCGCGTCTACTACGACGAGTCCTCCTTCTAC
CTCATCCGCATCGCCATCCTCAACGCGCTCAAGAGGCTCGCGGGGGAGGG
AAGTGCCGGGGCAGTCCTCATCTCAGACGTCCTGGAGCTCATGCTGAGGG
CTGCACGTGACGGGATCCCCAACGTACGCTTCACGGCCGTGCGCGCTCTT
CAGGAGATGGCCCCCAGTCTCGACGCAGGGTCGCTGGAGTCTCAGGGAAG
TGCCGGGGCAGTCCTCATCTCAGACGTCCTGGAGCTCATGCTGAGGGCTG
CACGTGACGGGATCCCCAACGTACGCTTCACGGCCGTGCGCGCTCTTCAG
GAGATGGCCCCCAGTCTCGACGCAGGGTCGCTGGAGTCTCAGGTCCGGCC
ATGCCTCACCAACCTGGTCCAGTCGGACCCTGACGACGATGTCAAGTACT
ACGCCGGCCAGGCGCTCGAGAGCATCCGCTGAGTCCGGCCATGCCTCACC
AACCTGGTCCAGTCGGACCCTGACGACGATGTCAAGTACTACGCCGGCCA
GGCGCTCGAGAGCATCCGCTGA
back to top