mRNA_S-ischiensis_contig10.1644.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig10.1644.1
Unique NamemRNA_S-ischiensis_contig10.1644.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
[Close]
BLAST of mRNA_S-ischiensis_contig10.1644.1 vs. uniprot
Match: D8LLX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLX5_ECTSI)

HSP 1 Score: 454 bits (1167), Expect = 1.230e-146
Identity = 259/513 (50.49%), Postives = 317/513 (61.79%), Query Frame = 1 
Query:    1 RRPGAGSLRQHVHGSCQEARALDSSAPLLHVMSNAPTAAKA-------------------------EDGGXXXGEADVLAGVPTEVLEAGLTDTCMHEVGHTLGLRHNFKGSTSLSLAEAQDPDVVAEKGLTSSVMDYLPLNLVSSKLRGDKKPLFFTPVIGEYDRWAIEYGYTKAEGEG--LLRQHPDLAAVAAKALPFSTDEDGPSSSGMDPTVSTFDLGSEPLDFYEDKLDLVAELRPSLLDRSVLLG-APFTDFQQGETALLTQVLVAGLYAAKYVAGFETSKQRRVAEDTPAPLRAVSAERQRRALALVVRVLSGDAPDGGADFLPAPAEVPEAVGRGGECTGMERYCLAVTPYDLLSKVSLVRKRVLLNLVSLDRLKRLRIHRWADPEG----LAGPELFRELTTAIWGEGGFQGDRVKHWENWDIMLFWFDVLQAYAAAPATVGVPGDLTATAAGLVYALVEGGEGLPAGDEAQGLYRAAYRRMKEWESLGTAASGTAKMLLLLKG 1443
            R  G+GSLR H  G CQEAR  D S  LL ++                                  E GG   G A  LA    E+L AGL D  MHEVGHTLGLRHNF+GST L+L E QDP   AE GLTSSVMDYLPLN+VSSK++G   P +FTP +GEYD WAI+YGY   EGE   LL +H DL A+A++AL FSTDEDG   SGM+P  S FDLG EP+D++EDKL+LV EL P LLDRS   G A F  +     +LL QVL +GLY+ KY+ GF  SKQRRV  DTP P++ V A+RQRRAL LV+RV++GD P GGA FLP   +     G  G C G+ +YC  V P D+LS+V+ +RK VLL   S+D + RLR+H WA   G    L+  E+F   T A+WG+GGF   R K W+NWD+MLFW +VLQAY +A     VPGD+TATA GLVY+L++ G+ L + D A GL+RAA  +   WE  G         L  LKG
Sbjct:  297 RHGGSGSLRYHGRGECQEARMNDISMSLLPLVREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESGGR--GTAPGLA--TDEILGAGLMDVVMHEVGHTLGLRHNFEGSTLLTLEELQDPTKTAEVGLTSSVMDYLPLNVVSSKMQGSAVPHYFTPRVGEYDMWAIKYGYMAVEGEADELLAEHEDLKALASQALAFSTDEDGSGYSGMNPLASVFDLGQEPMDYWEDKLELVTELWPVLLDRSTQQGEAQFQRYGHAAMSLLRQVLASGLYSTKYIGGFHISKQRRVESDTPGPIQLVPADRQRRALTLVLRVVTGDEPAGGAAFLPGEEDFSNLAGWSGSCAGLGQYCYGVVPVDVLSEVNALRKSVLLQAFSVDHIMRLRLHSWASGAGGVDTLSVSEMFESATNAVWGDGGFGSARAKLWQNWDLMLFWLEVLQAYGSAGVESVVPGDVTATAVGLVYSLMDTGKNLTSADAAYGLHRAAALKHGAWEERGNTDGFILWQLGGLKG 805
[Close]
BLAST of mRNA_S-ischiensis_contig10.1644.1 vs. uniprot
Match: A0A835ZFA7_9STRA (DUF4953 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFA7_9STRA)

HSP 1 Score: 348 bits (894), Expect = 6.630e-111
Identity = 203/414 (49.03%), Postives = 257/414 (62.08%), Query Frame = 1 
Query:  211 MHEVGHTLGLRHNFKGSTSLSLAEAQDPDVVAEKGLTSSVMDYLPLNLVSSKLRGDKK--PL-----FFTPVIGEYDRWAIEYGY---TKAEGEG---LLRQHPDLAAVAAKALPFSTDEDGPSSSGMDPTVSTFDLGSEPLDFYEDKLDLVAELRPSLLDRSVLLGAPFTDFQQGETALLTQVLVAGLYAAKYVAGFETSKQRRVAEDTPAPLRAVSAERQRRALALVVRVLSGDAPDGGA------DFLPAPAEVPEAVGRGGECTGMERYCLAVTPYDLLSKVSLVRKRVLLNLVSLDRLKRLRIHRWADPEGLAGP--ELFRELTTAIWGEGGFQGDRVKHWENWDIMLFWFDVLQAYAAAPATVGVPGDLTATAAGLVYALVEGGEGLPAGDEAQGLYRAAYRRMKEWE 1389
            MHEVGHTLGLRHNF+GST  +LA+ Q P   ++ GLT+SVMDYLP+N+VS+KLR      P+     +FTPV+G YD WAIEYGY   ++A+      +  QHPDL         FSTDED   + G+DP VS FDL S+PL F+ D+LD+VAE+RP LLDR+V LG PFT +   E  LL  + V+GLYAAKY+ G + SKQRR+A +T AP   VSA +QR ALAL+V++L+G    G A      DFLP P  +P  V  GG C G+ERYCLA  PYD+L+ +  VR+ +LLN++SLDRL  +R++ W      A    ELF  LT AIWG G     R    ENW IMLFW D+L A A A  + G  GD+ A AAG  Y +      L     A GL +   RR+  WE
Sbjct:    1 MHEVGHTLGLRHNFRGSTGPTLAQLQSPKYTSKFGLTTSVMDYLPINIVSAKLRAAAGVGPIGPDHNYFTPVLGSYDMWAIEYGYMDVSQADAVAPATMFDQHPDLET-------FSTDEDRSRNDGIDPFVSVFDLSSDPLAFFADRLDVVAEIRPKLLDRAVQLGEPFTRYSDSEKMLLQLIKVSGLYAAKYIGGMQLSKQRRIATNTQAPATPVSAAQQREALALLVKILTGVEAVGSAANSTSVDFLPEPTALPLMVQTGGVCEGIERYCLATEPYDVLTDLQTVREMILLNVLSLDRLDMVRLNSWGKQGSSAFTIRELFTTLTDAIWGGGLIASTRAASPENWAIMLFWGDLLMAIAVAIPSSG--GDIAAAAAGEAYRIAASAPALDPSAPAWGLSKEFQRRLSTWE 405
[Close]
BLAST of mRNA_S-ischiensis_contig10.1644.1 vs. uniprot
Match: A0A4D9CV01_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CV01_9STRA)

HSP 1 Score: 251 bits (640), Expect = 1.340e-68
Identity = 165/432 (38.19%), Postives = 232/432 (53.70%), Query Frame = 1 
Query:   31 HVHGSCQEARALDSSAPLLHVMSNAPTAAKAEDGGXXXGEADVLAGVPTEVLEAGLTDTCMHEVGHTLGLRHNFKGSTSLSLAEAQDPDVVAEKGLTSSVMDYLPLNLVSSKLRGDKKPLFFTPVIGEYDRWAIEYGYTKAEGEGLLRQHPDLAAVAAKALPFSTDEDGPSSSGMDPTVSTFDLGSEPLDFYEDKLDLVAELRPSLLDRSVLLGAPFTDFQQGETALLTQVLVAGLYAAKYVAGFETSKQRRVAEDTPA--PLRAVSAERQRRALALVVRVLSGDAPDGGADFLPAPAEVPEAVGRGGECTGMERYCLAVTPYDLLSKVSLVRKRVLLNLVSLDRLKRLRIHRWADP------EGLAGPELFRELTTAIWGEGGFQGDRVKHWENWDIMLFWFDVLQAYAAAPATVGVPGDLTATAAGLVYA 1302
            H HG CQEARA    +P L +++    A K           D L  V  ++L AG+ +  MHEVGHTLGLRHNFK S+ ++  + QD +   + GL++SVMDYLP+NLVS +   +    +F+  IG YD  AI+YGYT+   E     H  L A+A + L F TDED  S  G DP V+ FD  S+P  FY D+L LVAELR +LLDR VL G  FT +   ET LL  VL A     K++ G+  ++ RR A       PL  +S   Q+RALA V++VL+ D     +   P    V   + +GGEC+G+ +YCLA +P D++  +   R  +L +L ++ RL+RLR   W         +     +LF + T A++G       R     NW++ ++W + L   A+AP     P DL+   A L  A
Sbjct:  525 HRHGRCQEARAKYDLSPKLALLAR-ELAGK-----------DAL--VSDDILHAGIREVIMHEVGHTLGLRHNFKASSGVTWEQTQDVEYTQKHGLSTSVMDYLPMNLVSGRA-AETNVDYFSSTIGIYDVAAIKYGYTELPDEAPGMPHKVLTALADQNLLFGTDEDDASPLGADPYVNVFDFTSDPAAFYLDRLTLVAELRENLLDRVVLEGDEFTRYAAAETTLLKVVLSAAKSLTKFIGGYTVNRARRAAPGVAQAPPLAVLSPSEQQRALAGVLQVLTDDE----SIIFPQAEAVQWMLNKGGECSGLYQYCLARSPMDVVKAIDDGRISLLTHLFAIPRLERLRTAEWVTSASGEAEKSFGVADLFTQTTLALYGAEPGDSARAAESRNWNLQIYWVERLLELASAP-----PEDLSREVAALAAA 932
[Close]
BLAST of mRNA_S-ischiensis_contig10.1644.1 vs. uniprot
Match: A0A7S0IQ58_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IQ58_9EUKA)

HSP 1 Score: 231 bits (588), Expect = 4.860e-64
Identity = 136/311 (43.73%), Postives = 185/311 (59.49%), Query Frame = 1 
Query:  169 VPTEVLEAGLTDTCMHEVGHTLGLRHNFKGSTSLSLAEAQDPDVVAEKGLTSSVMDYLPLNLVSSKLRGDKKPLFFTPVIGEYDRWAIEYGYTKAEGEGLLRQHPDLAAVAAK-----ALPFSTDEDGPSSSGMDPTVSTFDLGSEPLDFYEDKLDLVAELRPSLLDRSVLLGAPFTDFQQGETALLTQVLVAGLYAAKYVAGFETSKQRRVAEDTPAPLRAVSAERQRRALALVVRVLSGDAPDGGADFLPAPAEVPEAVGRGGECTGMERYCLAVTPYDLLSKVSLVRKRVLLNLVSLDRLKRLRIHRW 1086
            VP+E++E  +T   MHEVGHTLGLRHNFKGS + SL +  +     + GLTSSVMDYLP  L S++    +  ++++PV+G YD+WAIEYGY+   GE    QHP L A+A++     AL F+TDED P S G DP  + +DLG +PL F+ED+L L   L   + DR+V  G P+T   +   +L+   L AG+Y+AKYV G+  SK  R      A    V A  QRRAL+L + V+S         +LPA       V R G C G+++YCL ++  D+LS+    RK VLL LV  +RL+ L  H W
Sbjct:   82 VPSELIEQAITSVVMHEVGHTLGLRHNFKGSAAYSLEQLANESFTRQHGLTSSVMDYLPPFLPSNESL--QTGVYYSPVVGAYDKWAIEYGYSPVRGEVSGEQHPALRAIASRGSLSPALAFATDEDSPRSDGADPLTNLYDLG-DPLSFHEDQLALAQRLLVEVADRTVRPGEPWTRQLRAVKSLMRSALRAGVYSAKYVGGYVFSKAHRGDVGAAAAASPVGAAEQRRALSLALAVISQSF------WLPAARAARHIVKRVGWCDGIDQYCLGLSTADILSEALDTRKLVLLALVRTERLRGLMHHEW 383
[Close]
BLAST of mRNA_S-ischiensis_contig10.1644.1 vs. uniprot
Match: A0A7S1TU96_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TU96_9STRA)

HSP 1 Score: 192 bits (489), Expect = 2.510e-51
Identity = 131/350 (37.43%), Postives = 177/350 (50.57%), Query Frame = 1 
Query:  181 VLEAGLTDTCMHEVGHTLGLRHNFKGSTSLSLAEAQDPDVVAEKGLTSSVMDYLPLNLVSSKLRGDKKP-LFFTPVIGEYDRWAIEYGYTKAEGE-----GLLRQHPDLAAVAAKALPFSTDEDGPSSSGMDPTVSTFDLGSEPLDFYEDKLDLVAELRPSLLDRSVLLGAPFTDFQQGETALLTQVLVAGLYAAKYVAGFETSKQRRVAEDTPAPLRAVSAERQRRALALVVRVLSGDAPDGGADFLPAPAEVPEAVGRGGECTG-MERYCLAVTPYDLLSKVSLVRKRVLLNLVSLDRLKRLRIHRWADPEGLAGPELFRELTTAIWGEGGFQGDRVKHWENWDIMLF 1209
            V+EAGL D  MHEVGHTLGLRHNFKGST  +  + ++ D V + GLTSSVMDYLP+N+ +       +P   FTP IGEYD+WAI YGY   E E     GL+ QHP L A+A KAL F TDED   + G +   S FDL + P  +Y D+L L   L+ S  +RSV  G P T    G  A  + +L A  Y  K + G+   K  + ++   AP+ AV A  Q  +L  ++ VL G+     A + P   +         EC   +E YC  V P    ++     + +L  L+   RL+R R   W+D  G     L R     +  E       V  +    ++LF
Sbjct:   25 VIEAGLKDVVMHEVGHTLGLRHNFKGSTERTKEQLRNADYVDKHGLTSSVMDYLPMNVWAEDFDAAVQPQTLFTPRIGEYDKWAIRYGYAPVEDESGDLSGLVSQHPKLTAIADKALAFGTDEDISGAEGAEYHTSVFDLSANPTAYYLDQLALAERLKTSAKERSVFDGEPGTRIDLGFRAAESTLLFACKYLTKAIGGYLLDKSAKSSDY--APVSAVPASVQETSLEAILSVLKGEKYYSTASY-PLDLKAYAIKANVDECPNPVEGYCYGVEPVSAFARRDTRDQTILDYLLDPARLERRRDQAWSDGVGSLADYLKRLTDELLSAEAAAGNPNVAEYLLTLLLLF 371
[Close]
BLAST of mRNA_S-ischiensis_contig10.1644.1 vs. uniprot
Match: R1F418_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1F418_EMIHU)

HSP 1 Score: 194 bits (493), Expect = 1.050e-48
Identity = 127/324 (39.20%), Postives = 168/324 (51.85%), Query Frame = 1 
Query:  169 VPTEVLEAGLTDTCMHEVGHTLGLRHNFKGSTSLSLAEAQDPDVVAEKGLTSSVMDYLPLNLVSSK-------LRGDKKPLFFTPVIGEYDRWAIEYGYTKAEGEGLLRQHPDLAAVAAKA-----LPFSTDEDGPSSSGMDPTVSTFDLGSEPLDFYEDKLDLVAELRPSLLDRSVLLGAPFTDFQQGETALLTQVLVAGLYAAKYVAGFETSKQRRVAEDTPAPLRAVSAERQRRALALVVRVLSGDAPDGGADFLPAPAEVPEAVGRGGECTGMERYCLAVTPYDLLSKVSLVRKRVLLNLVSLDRLKRLRIHRWADPEGL 1104
            VP E +EA L D  MHEVGHTLG+RHNFK ST+ S A+  D +     G  SSVMDY+   L S++       L  +     F  V+G YD+  I+YGY     E   RQH +LAA+AA+      L FSTDEDGP + G DPT S +D+ S+PL FY D++ L   L     +R+V +G P+T         +   L AG Y AK + GF  SK  R     P P+    A  Q RAL L+++++S D      D L     +P    R G C G++ YC  + P +LL +V   R  +L  LV   RL  L+   W   EGL
Sbjct:  626 VPEEYVEAALVDVTMHEVGHTLGMRHNFKASTAYSYAQLLDANFTKTNGFASSVMDYIGAFLPSNRSLPVVGSLGAEDGYNPFMGVVGAYDKHVIDYGYRPLADEQAGRQHAELAALAAEGAANRELAFSTDEDGPRTDGSDPTASLYDMSSDPLGFYIDQIALAQRLLEDASNRTVAIGEPWTKLLPAVERYMGAALKAGTYGAKNIGGFIFSKAHRGDPGAPDPMVPTPAADQWRALRLILQIISDDFWLPATDALRWARSLPR---RAGWCEGLDVYCYGLEPAELLERVFRTRVNLLHTLVQPHRLAGLQQAEW---EGL 943
[Close]
BLAST of mRNA_S-ischiensis_contig10.1644.1 vs. uniprot
Match: R1ELX3_EMIHU (DUF4953 domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1ELX3_EMIHU)

HSP 1 Score: 188 bits (478), Expect = 8.410e-47
Identity = 126/313 (40.26%), Postives = 164/313 (52.40%), Query Frame = 1 
Query:  169 VPTEVLEAGLTDTCMHEVGHTLGLRHNFKGSTSLSLAEAQDPDVVAEKGLTSSVMDYLPLNLVSSK---LRGDKKPLFFTP---VIGEYDRWAIEYGYTKAEGEGLLRQHPDLAAVAAKA-----LPFSTDEDGPSSSGMDPTVSTFDLGSEPLDFYEDKLDLVAELRPSLLDRSVLLGAPFTDFQQGETALLTQVLVAGLYAAKYVAGFETSKQRRVAEDTPAPLRAVSAERQRRALALVVRVLSGDAPDGGADFLPAPAEVPEAVGRGGECTGMERYCLAVTPYDLLSKVSLVRKRVLLNLVSLDRLKRLR 1074
            VP E +EA L D  MHEVGHTLGLRHNF+ S + S ++  DP      G  SSVMDY+   L SS+   + G      + P   V+G YDR AIEYGY    GE   RQH  LAA+A++      L FSTDED  ++SG DP VS +D  ++PL FY D+L L   L  +  +R+V +G P+          +   + AG  AAKYV G+  SK  +     P PL  VSA  Q RA+ L++++LS D       F     E+     R GEC G++ YCL +    L  K    R  +L  LV   RL  LR
Sbjct:  605 VPEEYIEAALVDVTMHEVGHTLGLRHNFRASAAYSFSQLSDPSFTGAHGYASSVMDYVDAFLPSSRNLSVIGSSTGAVYNPFNGVVGIYDRHAIEYGYAPLAGEEAGRQHAYLAALASRGAANAELAFSTDEDEATASGPDPLVSLYDQSNDPLGFYIDQLALSQRLLSAAANRTVGVGEPWAALLPSVERYMGAAMKAGAAAAKYVGGYVFSKAHKGDPAAPPPLVPVSAAEQWRAVQLLLQILSDD-------FWVPQEELLVLPERRGECHGLDVYCLGLGVAKLQDKAHETRTLLLQTLVKPARLASLR 910
[Close]
BLAST of mRNA_S-ischiensis_contig10.1644.1 vs. uniprot
Match: A0A0G4EX05_VITBC (DUF4953 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EX05_VITBC)

HSP 1 Score: 185 bits (469), Expect = 1.420e-45
Identity = 120/333 (36.04%), Postives = 178/333 (53.45%), Query Frame = 1 
Query:  181 VLEAGLTDTCMHEVGHTLGLRHNFKGSTSLSLAEAQDPDVVAEKGLTSSVMDYLPLNLVSSKLRGDKKPLFFTPVIGEYDRWAIEYGYTKAEGEGLLRQHPD-LAAVAAKALPFSTDEDGPSSSGMDPTVSTFDLGSEPLDFYEDKLDLVAELRPSLLDRSVLLGAPFTDFQQGETALLTQVLVAGLYAAKYVAGFETSKQRR---------VAEDTPA---PLRAVSAERQRRALALVVRVLSG-----------------DAPDG-GADFLPAPAEVPEAVGRGGECTGMERYCLAVTPYDLLSKVSLVRKRVLLNLVSLDRLKRLRIHRW 1086
            +LEAGL D   HEVGHTLGLRHNFK ST++   +  +   + + GL SSVMDY  +N+ +         L+F+P IG+YD+ AI +GY + E E     HP  L+ ++++ + F+TDED P +SG DP  +  DL S PL FY ++L+ V  +R  LL+ SVL G   +   + E  +L +V+ AG+Y +K++ G   +K  +         +AE T A   P  AV   RQ+ AL  +  +L+G                    DG G+   P+P  V   V R G C+G  R+C+   P D+L+ +  ++K +LL +    RL RLR   W
Sbjct:  652 ILEAGLEDVVTHEVGHTLGLRHNFKASTTIPWEQLTNATYICKHGLGSSVMDYTAVNMAAGVA---DDALYFSPTIGDYDKLAIRFGYRRLEDEVSGVPHPSSLSLLSSEPMAFATDEDDPDASGTDPYNNVRDL-SNPLQFYLNELEYVKNIRSVLLESSVLPGEDMSRLAEAEMTILGRVMTAGMYLSKFLGGVVLTKDPKPTPTQANEMMAEATAAMAPPALAVDGNRQQEALEAITEILTGVPARDDRRGKGSRGKRKSGVDGRGSSLYPSPESVQYLVRRVGVCSGPTRFCMGREPLDILASIDSLQKLLLLFIFLPRRLVRLRTLSW 980
[Close]
BLAST of mRNA_S-ischiensis_contig10.1644.1 vs. uniprot
Match: A0A7S3G7R3_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3G7R3_9EUKA)

HSP 1 Score: 172 bits (436), Expect = 1.250e-41
Identity = 108/338 (31.95%), Postives = 181/338 (53.55%), Query Frame = 1 
Query:  196 LTDTCMHEVGHTLGLRHNFKGSTSLSLAEAQDPDVVAEKGLTSSVMDYLPLNLVSSKLRGDKKPLFFTPVIGEYDRWAIEYGYTKAEGEGLLRQHPDLAAVAAKAL----PFSTDEDGP--SSSGMDPTVSTFDLGSEPLDFYEDKLDLVAELRPSLLDRSVLLGAPFTDFQQGETALLTQVLVAGLYAAKYVAGFETSKQRRVAEDTPAPLRAVSAERQRRALALVVRVLSGDAPDGGADFLPAPAEVPEAVGRGGECTGMERYCLAVTPYDLLSKVSLVRKRVLLNLVSLDRLKRLRIHRWADPEGLAGP------------ELFRELTTAIWGEG 1155
            L D  MHEVGHTLGLRHNFKGST+ S A+ +DP     K ++ SVMDYLP+N+    L G ++  ++   I EYD+WAI+YGYT  + E +  +H  L  +A+++      F+TDEDGP  SSS  DP V+ FDL S+P+ ++ ++++++ E+   +++RSV +G+ +T          +++  A +Y  K++ G   +K  R       P+  VS E+  RA+  V+ +L  D        LP    +P  V R G C+G+  YC  +T  + +     +   ++    +  ++ RL  + W + + ++              ELF ++ +++  EG
Sbjct:  462 LKDVTMHEVGHTLGLRHNFKGSTARSSADLKDPT----KQISCSVMDYLPVNVA---LNGSEQGNYYMTDIAEYDKWAIKYGYTILDDEVVGVKHATLDQIASESENPNHAFATDEDGPGTSSSAEDPFVNYFDLNSDPVVYFSEQIEMMNEMMNGIVNRSVDIGSSWTGLDNMMRVYHSRMQRAAIYLFKFIGGRNINKLHRGEAGGKVPVEPVSKEQTERAVNAVISLLKSD------KLLPRRELMPFLVSRSGWCSGLHTYCDGLTTDEPIYVFEYIASSLVSYAFAAAKIDRLNTNAWLNKDSISNAYTKDNMFAHFHDELFEQVVSSVPEEG 786
[Close]
BLAST of mRNA_S-ischiensis_contig10.1644.1 vs. uniprot
Match: A0A7R9YFV1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YFV1_9STRA)

HSP 1 Score: 172 bits (435), Expect = 1.790e-41
Identity = 112/272 (41.18%), Postives = 145/272 (53.31%), Query Frame = 1 
Query:  178 EVLEAGLTDTCMHEVGHTLGLRHNFKGSTSLSLAEAQDPDVVAEKGLTSSVMDYLPLNLVSSKLRGDKKP--LFFTPVIGEYDRWAIEYGYTKAEGEGLLRQHPDLAAVAAKALPFSTDEDGPSSSGMDPTVSTFDLGSEPLDFYEDKLDLVAELRPSLLDRSVLLGAPFTDFQQGETALLTQVLVAGLYAAKYVAGFETSKQRRVAEDT---PAPLRAVSAERQRRALALVVRVLSGDAPDGGADFLPAPAEVPEAVGRGGECTGM-ERYC 975
            +VLEAGLTD  MHEVGHTLGLRHNFKGS   +  + +D D V E GLTSSVMDYLPLN  S        P    FTPVIGEYD WAI++GY   E +   ++      V     PF+TDED P S+GMD   S FDL S+P+ +YED+L     L+     R VL G   T  +     +   +L +  Y AK + G+   K R+  + T   P P+R      Q RAL+ ++ VL G        +  +  +V  AV    +C  + E YC
Sbjct:  597 QVLEAGLTDVVMHEVGHTLGLRHNFKGSAQRTKEQLKDKDHVHEHGLTSSVMDYLPLNFWSEDFTEPFPPDAPLFTPVIGEYDMWAIKFGY---ENDSQYQE------VFEAEHPFATDEDEPRSAGMDIETSVFDLSSDPIAYYEDQLKFARLLKADAAQRGVLAGEYHTRIEALLKKVQRTMLSSCAYMAKAIGGYVIGKTRKAQDQTNGAPTPVRRTEQSTQDRALSNILDVLLGAEDSDQTAYSGSDTDVAVAV-EPNDCPNVVEGYC 858
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig10.1644.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLX5_ECTSI1.230e-14650.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZFA7_9STRA6.630e-11149.03DUF4953 domain-containing protein n=1 Tax=Tribonem... [more]
A0A4D9CV01_9STRA1.340e-6838.19Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
A0A7S0IQ58_9EUKA4.860e-6443.73Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S1TU96_9STRA2.510e-5137.43Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
R1F418_EMIHU1.050e-4839.20Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
R1ELX3_EMIHU8.410e-4740.26DUF4953 domain-containing protein n=1 Tax=Emiliani... [more]
A0A0G4EX05_VITBC1.420e-4536.04DUF4953 domain-containing protein n=2 Tax=Vitrella... [more]
A0A7S3G7R3_9EUKA1.250e-4131.95Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
A0A7R9YFV1_9STRA1.790e-4141.18Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig10contigS-ischiensis_contig10:3392184..3399612 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score451.4
Seed ortholog evalue4.9e-124
Seed eggNOG ortholog2880.D8LLX5
EggNOG free text desc.Met-zincin
EggNOG OGs2CXMF@1,2RYE2@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionMetallopeptidase, catalytic domain
Ec32 orthologEc-14_002030.1
Exons9
Model size1919
Cds size1371
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815542.884618-UTR-S-ischiensis_contig10:3392183..33922371622815542.884618-UTR-S-ischiensis_contig10:3392183..3392237Schizocladia ischiensis KU_0333UTRS-ischiensis_contig10 3392184..3392237 +
1695739758.9637632-UTR-S-ischiensis_contig10:3392183..33922371695739758.9637632-UTR-S-ischiensis_contig10:3392183..3392237Schizocladia ischiensis KU_0333UTRS-ischiensis_contig10 3392184..3392237 +
1622815542.8963976-UTR-S-ischiensis_contig10:3392942..33929811622815542.8963976-UTR-S-ischiensis_contig10:3392942..3392981Schizocladia ischiensis KU_0333UTRS-ischiensis_contig10 3392943..3392981 +
1695739758.975362-UTR-S-ischiensis_contig10:3392942..33929811695739758.975362-UTR-S-ischiensis_contig10:3392942..3392981Schizocladia ischiensis KU_0333UTRS-ischiensis_contig10 3392943..3392981 +
1622815543.0224311-UTR-S-ischiensis_contig10:3399157..33996121622815543.0224311-UTR-S-ischiensis_contig10:3399157..3399612Schizocladia ischiensis KU_0333UTRS-ischiensis_contig10 3399158..3399612 +
1695739759.0689034-UTR-S-ischiensis_contig10:3399157..33996121695739759.0689034-UTR-S-ischiensis_contig10:3399157..3399612Schizocladia ischiensis KU_0333UTRS-ischiensis_contig10 3399158..3399612 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815542.9086766-CDS-S-ischiensis_contig10:3392981..33931071622815542.9086766-CDS-S-ischiensis_contig10:3392981..3393107Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3392982..3393107 +
1695739758.985321-CDS-S-ischiensis_contig10:3392981..33931071695739758.985321-CDS-S-ischiensis_contig10:3392981..3393107Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3392982..3393107 +
1622815542.9232473-CDS-S-ischiensis_contig10:3393529..33936721622815542.9232473-CDS-S-ischiensis_contig10:3393529..3393672Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3393530..3393672 +
1695739758.9946718-CDS-S-ischiensis_contig10:3393529..33936721695739758.9946718-CDS-S-ischiensis_contig10:3393529..3393672Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3393530..3393672 +
1622815542.9412518-CDS-S-ischiensis_contig10:3394343..33944641622815542.9412518-CDS-S-ischiensis_contig10:3394343..3394464Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3394344..3394464 +
1695739759.0045207-CDS-S-ischiensis_contig10:3394343..33944641695739759.0045207-CDS-S-ischiensis_contig10:3394343..3394464Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3394344..3394464 +
1622815542.958034-CDS-S-ischiensis_contig10:3395293..33954251622815542.958034-CDS-S-ischiensis_contig10:3395293..3395425Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3395294..3395425 +
1695739759.0152261-CDS-S-ischiensis_contig10:3395293..33954251695739759.0152261-CDS-S-ischiensis_contig10:3395293..3395425Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3395294..3395425 +
1622815542.9693263-CDS-S-ischiensis_contig10:3396265..33963701622815542.9693263-CDS-S-ischiensis_contig10:3396265..3396370Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3396266..3396370 +
1695739759.0259035-CDS-S-ischiensis_contig10:3396265..33963701695739759.0259035-CDS-S-ischiensis_contig10:3396265..3396370Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3396266..3396370 +
1622815542.982241-CDS-S-ischiensis_contig10:3396917..33972051622815542.982241-CDS-S-ischiensis_contig10:3396917..3397205Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3396918..3397205 +
1695739759.0361195-CDS-S-ischiensis_contig10:3396917..33972051695739759.0361195-CDS-S-ischiensis_contig10:3396917..3397205Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3396918..3397205 +
1622815542.9995441-CDS-S-ischiensis_contig10:3397921..33981401622815542.9995441-CDS-S-ischiensis_contig10:3397921..3398140Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3397922..3398140 +
1695739759.047462-CDS-S-ischiensis_contig10:3397921..33981401695739759.047462-CDS-S-ischiensis_contig10:3397921..3398140Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3397922..3398140 +
1622815543.0106432-CDS-S-ischiensis_contig10:3398920..33991571622815543.0106432-CDS-S-ischiensis_contig10:3398920..3399157Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3398921..3399157 +
1695739759.0585525-CDS-S-ischiensis_contig10:3398920..33991571695739759.0585525-CDS-S-ischiensis_contig10:3398920..3399157Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3398921..3399157 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig10.1644.1prot_S-ischiensis_contig10.1644.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig10 3392982..3399157 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig10.1644.1

>prot_S-ischiensis_contig10.1644.1 ID=prot_S-ischiensis_contig10.1644.1|Name=mRNA_S-ischiensis_contig10.1644.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=457bp
MSNAPTAAKAEDGGGGGGEADVLAGVPTEVLEAGLTDTCMHEVGHTLGLR
HNFKGSTSLSLAEAQDPDVVAEKGLTSSVMDYLPLNLVSSKLRGDKKPLF
FTPVIGEYDRWAIEYGYTKAEGEGLLRQHPDLAAVAAKALPFSTDEDGPS
SSGMDPTVSTFDLGSEPLDFYEDKLDLVAELRPSLLDRSVLLGAPFTDFQ
QGETALLTQVLVAGLYAAKYVAGFETSKQRRVAEDTPAPLRAVSAERQRR
ALALVVRVLSGDAPDGGADFLPAPAEVPEAVGRGGECTGMERYCLAVTPY
DLLSKVSLVRKRVLLNLVSLDRLKRLRIHRWADPEGLAGPELFRELTTAI
WGEGGFQGDRVKHWENWDIMLFWFDVLQAYAAAPATVGVPGDLTATAAGL
VYALVEGGEGLPAGDEAQGLYRAAYRRMKEWESLGTAASGTAKMLLLLKG
TGTPTT*
back to top

mRNA from alignment at S-ischiensis_contig10:3392184..3399612+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig10.1644.1 ID=mRNA_S-ischiensis_contig10.1644.1|Name=mRNA_S-ischiensis_contig10.1644.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=7429bp|location=Sequence derived from alignment at S-ischiensis_contig10:3392184..3399612+ (Schizocladia ischiensis KU_0333)
AGGCGGCCCGGGGCTGGCAGCCTCCGCCAGCACGTGCACGGGTCATGCCA
AGAGGTGAGAGAAGAGTTGATGGACTTGGCTTTTGGCGGGCCATACGGGG
TTGCAACTTCAAGGTATGGAGATCGCTTGTCCATTGGACCAGCATGAAAT
AGACCTCCATACGATTAGGATGAAGTAGACGTGATTTTGCTGTACTAAGT
AGGCACTTGGAAGTGCTTCCTATGACTTAGAGATGTGCGTACTGTACTCG
GGTGCTTTGTTGATGAATCCTCACCCGGCGTGGCTTGCCGGGCGTTTGTC
GGCCAACGCGTGAGTGTGGTAGTGCTGCGGTCGCTGTACTTTTGCTCGTC
CAGTCCAGTACAGTGCAGTTCAGTAGTACTTCGAAGTGCGCACAGTGGGG
TACGATGCACGCGACGTGTGGCCTGCACTTGTGTGGTTGAGTCAAGTTTT
AAGTTCTGATATATTGATATCCATATACGTGGACGATTTACTTGTGTCAG
GGGCTAACCCAAATGCTGTGGATGACTTCCTCAAGTCTATGAAAGCCAGG
GTTGATACTCAAGGTGGAAGGTTCCGACCACGAGCGTGACTCTACACTTG
GCTGTTGTACGTTAACCAACTTGTCCCTTCTTCCTGTTAGAGAGGGGTAG
GTACTCTTGGCGCGAACGCCAGAACCTCACCGCCGGTGCCTTTCCCCCCC
CCCCCACCCACCCACCCACTCCCCACTTGGTGGCCCATCTAAATCTGCGC
CCCCCGCAGGCCCGCGCGCTGGACTCATCTGCACCCCTGCTCCATGTAAT
GTCAAATGCCCCCACGGCGGCGAAGGCGGAGGACGGTGGTGGAGGAGGGG
GCGAGGCGGATGTGTTGGCGGGGGTGCCAACCGAGGTCCTCGAGGCAGGG
TTGACCGACACGTGCATGCATGAGGTACGTGCCAGTGCAGTAGTAGTGCA
GTTTTGTATCTACTGTACGAAGTAGTACAGTATGTTTGTACAGTAGAGCT
GAATGACACGCGTGTGCATGGAGTATGCGGCAGCGAGTGCGTACGTTAGC
CGTCGGAGAGAGAGAGAGAGAGAGGGAGAGTGACACGACGGGCCGCTGCA
AATAGTGTGGTGTGATGTGATGTGATGTGATTGACGTGAAACTGCAGTGA
AATGGAGTACGCATCACATCAAATCACTTCACATGGCATCGCATCACACC
ACACGAGTGTCCTGTCGTCCTGTAAGGGTTGACACCAAGGCGAGTACCGC
AAGTACCGGACAGTACAGCACAGTACAGCTGGAGAACGGCGCGACGGTGT
GTGTGCACGGGTGTAACCCCCCGGGGCCTCCCTCGTCCCCCGGCAGGTGG
GGCACACGCTCGGCCTGCGCCACAACTTCAAGGGGTCTACGTCCTTGAGC
CTGGCGGAGGCGCAGGACCCAGACGTGGTGGCGGAGAAGGGGCTGACGTC
TTCTGTCATGGACTACCTGCCCCTGAACCTTGTGTCCAGGTCAGAGCCAC
TTGTACTGCATGCGCCTGGGAGGGAGGCATTGTGTATGGGGAGATGGTGA
AGAAGGGGGGGGGGGACGGGACGGGACGGGACGGGAGGGGGGGCACTCAT
GGGTTACTTGCAGACTGTGCTGTACAGTACAGCTGGGTGATACAGCAGTA
CAGTACAGTACAGTACAGACGGTACACAGTAGTAGCACTCTTCTACACGC
AGCTTGGGGGATTACTTGCAGACTGTGCTGTACAGTACAGCAGGGTTGTA
GTACAGTCTCGAGTACAATACAGTAAAGACAGTGCTACATAGTAGCAGTC
TTCTGCACACAGCTTGGGGGGTTACTTGCAGACTGTGCTGTACAGTACAA
GGGGTTGCGGTAGTCGCCGTGTTCATTCTCACCCATTTTTTTCTGCAAGT
GTACTGCAGTACAGCCCTTGCTTGCGCATGCCAACGGGTGGCCGGCGGTG
GGCGCTTTTGACACGACGATGAATCCCGCGCCCTGCTCTTTTCTCTGCCC
GCCCCGTCACTTCGTCCGCGCGTTGCCCAGGAAACTCCCCACCCACCCTT
GCCCAAGTCCCTCCCTCCCGCCGTCAAGCAACACACTCCCCCTGCCTCCC
GTCCCGTCCCGTCCCGTTTGTTTCCGCCGCCGACGCCCCGGCCACCGGTC
ACTTTCGCAGCAAGCTTCGAGGGGACAAGAAGCCCCTCTTCTTCACGCCC
GTGATCGGCGAGTACGACCGCTGGGCCATCGAGTACGGCTACACCAAGGC
GGAGGGGGAGGGGCTCTTACGGCAGCACCCGGTGCGCAGTGATGGCATGT
CTACGCAAATCAACCTATTTATCGATAGTACTGATCTACTGCATGTGTAT
ATCGATGATCGATATTCGATAGTTCGACCCACACTAAATCCAAGTAGTTT
TTGGCATGAAGACACGAAGCGAGTGGAAAAGAGGAGTTGGTCCTACTTAA
CGCGAGTTCAGGGCCCCCTTCCCCGGAAGCCCGTCTTTTCACTCGCCTTC
ACTCGCAGGGCACATAGAGCAGAAAAACAAAGAAAAACGAAGGAAGAAGA
GGACGGGAAGGAACAACAACGGAGGAGGGTTCTCTTGTGCCACATGCGGG
ACACGCAGAAGTAACGCCGATGACCGAACCAAGTAGTTAGTAACGCCACC
CACACAATCAGTCGAGCCCGATAACTATCTACTGATCGATATTCCATCAC
TGCCGGTGCGTGGACTGCCCTGCCCGTACAGTTGCCATACAGTTGCGGCG
GTGCAGTGCAGCGCAGGTACGCACGCGCCGCCGCCGTACAGTATATGCAG
CGTCTCTTGGCCCGGGGCGGGGTGTGTGTACTCCCCCGGCGTGAATTTGT
TTCGAGACGCGCTGTTCGTTCGGCATGGCTGTGGCACGGGCCGGGGAGAA
GCGTACTGGTTTGCAAACACACCACCGCGCCAATGCTCTGGAAGCCGCTT
TCTTATTCGTTTGTTCGTTTGCTTCGACGTATTTATTTATGTACTTCACA
AGCTCGTATACTCCGTGTACCCTGTACTGTACTGTGTAGGCTCACCTCGC
CCCCGGCCTCCCCCGTCTCCTCTCCCCCCGTCCCCTCTCGGCCCACGCCA
CGTGGCCCAGGACCTGGCCGCGGTGGCTGCTAAAGCCCTTCCCTTCTCCA
CGGACGAAGACGGGCCCTCTTCCTCGGGGATGGACCCCACCGTATCCACT
TTTGACCTGGGGTCCGAGCCTCTGGATTTCTACGAGGACAAGGTGGCTTG
TTTGACTTGGGCTGCCCGCACGTGCGCCGCGCGCCATGGCCCCGGAACTC
GAACTCACCCTCTTCTCTTCCCCGCTCTTCTTGTCCTTTGCGCAACCCTG
CTGCTGTACGCGTGGAGCACCGTCCTAAGGACGGTAGGCTCCTCTATCCA
TCTACTAGGGGATATAAGTTGTAGCAAGCTCGGTAGTTTTTTGCATGAAG
ATCAGCAAGCGAGTGGGAGAGAAGAGGTCTCCCTGCGAGCACATACGCGA
GGTCAGGGCCCCACCCCCGGAAGCCCTTCCTTTCACGCGCCTGCACTCGC
AGGGCTCGGCAGTTTTGTGCCGTGTTCGCCCCCCGCCCCCAGCGCGTGCC
GCGGACGTCGCCCAGAGTAGGTACTCGTAGCAGAGGAACGGACAGGCAGA
CGGACAGTGGTGGAGGTGGTGGGGCTCAGCACCTGCACGTGTACGGTGTT
TTGTGCGCGTCGCGGACACGGGAATTTAACAAGCCCTGAATGCGTAGAAG
AGGTACTGCAGGGTACTCGTATAGCCCTTGATCACCTACTGTACTGTAGT
GCCACCCGGAGCCCGTGCTGGGCTCAGTCAGTCCGCCCCTTTATTGTTCT
CGTGTCTCCACGTGACGCAAGCAGTGCCGCGCACGTGCACGCACCCAGTT
TCACGCTTCTCAGGAGCGAAAGAGATGGGTGATCGAATCATTGCGGTGGT
CCATTCCGGGCGTGCAAGCGCGTCGCGCGGTCTCCTCGCTTGACCTCTTG
CCCCTCCCCCCCCCCCTACGCGCCTCTGCCACCACCGCCGCCGCCGCCCC
CGCCGCCGCCGCCCCCACTGCCGCCACCTCAGCTGGATCTTGTCGCGGAG
CTGCGTCCCTCGCTGCTGGACCGCTCTGTGCTGCTGGGAGCACCCTTCAC
GGACTTCCAACAGGGGGAAACGGCCCTCCTCACACAGGTGCCTGCCGCGC
GCTGCTCACTTGCCACGTCTCTCCCTCACTGCTTGCTCGCTCGCTCGCTC
ACTCGCCTCTCGGCTGCCCGGAAAGCGCCGCCGCCCGCTCGCCTGCCCTC
AGGCAGCAAAAAAGGGATGGGAGGGGACGGGAAGGCCAAGTTGTGCTTGC
CTTAGTCCCGAGACCACCGACCAGTACATATATGCTATGTAGTACTGACG
TATATACTTCAAAATATACTTTGAAGTACGAAGTATGTACTCGGGTTGTG
CTTGCCGTAGTCCCGAGACCATTGACCACGCGCCGTTGGCGACGGGGAGC
ATTCTCCCATATACTTCCGGAAGTACACTTACTTCGAAGTATACATCTTA
TGCTACGTAGTGCACTCTGACCCTCCTGCCGGCGCTGTACTGTGCCACAT
CGGCTGCGCTTGGAGGCGTGCACACAACACCTTCTACTAGTACTTGGAGT
ACATAGGTACCCAGCGCCCGGCCTCCCCCGTCGCGCTCCTCCTTCCCCCC
CCACACCCCTCTGCCACTCCTCCTCCTCCCTCAGGTCCTCGTGGCGGGGC
TGTACGCGGCCAAGTACGTCGCCGGCTTCGAGACCAGCAAGCAGCGGCGG
GTGGCCGAGGACACCCCGGCGCCCCTGCGGGCCGTGTCAGCCGAGAGGCA
ACGCCGCGCGCTGGCGCTGGTGGTGCGGGTGCTGTCTGGGGATGCCCCGG
ACGGCGGGGCGGATTTCCTGCCCGCGCCCGCCGAGGTGCCGGAAGCGGTG
GGGCGGGGGGGGGAGTGCACGGGGATGGAGCGGTACTGCCTGGCCGTCAC
GCCGTACGACCTGCTGAGCAAGGTGGGAGGGAGGGTGGGCGCGGGGGGGG
CGCTAGGGCGGGAGGACGGGGGGGTGGGTAGGGAACAGCGTTTCCCAGAC
ACCCGGAAGAGCTTGTGGCGCGCGGGGCCCGGGGCCCGGCCGCGCCCATT
GGGGGCATCGGCGCTAGGCGCGCCGGTCCGATGTCGCCATACCTCACCCC
CCACAGGGAGGTTTTCGGGGCGCACTTACTAGTAACAAATGGGCTCCTGA
GCAGTGTTCATTTGCTCACATCCAACAGAGTTGGCCCGAGCCCGTACAAT
AGACATTGATCGCGCGCCTTTTCCGAGAACGGAGCACCATTTCTTGGGCA
CGGCGCGCCTTTGTTTGGGCGCCTGCGGTGCCCAGCCTCCTTTTTTCTTG
GGCACGTTTGGCCCGAAATCAGATTTCTGCGGGCGGCCGCACCCATTGAC
ACCTTGCTGTGGGAAACAGTGGTAGGGAGGGAGGGTGGGAGCGAACGAGG
AAGGAGAAGGGAAGGGGGCAGGGGAGGCAGGGCTGGGAGGGAGGGAGGGA
GGGCGTGAGGGAGGCAGTTCAGGGGAGAAAGGGAGAGAGAACCAGGGCCG
TGGTGCATCTAGTATGGGAGAGCTTCAAGCAGTCTGAGACTACAAGTACA
GGCAACGTATGTACTTGTAGTGCAAACGTCGTCTTCAAGGGTTTTTACCG
TTTCAGATTTATCCGCCTTCACCTTCATCCCTCTGCAGGTGTCTCTGGTG
AGGAAGCGGGTCCTCCTCAACCTGGTGTCCCTGGACCGCCTAAAGAGGCT
GAGGATACACCGCTGGGCCGACCCGGAGGGGCTCGCTGGGCCGGAGCTCT
TCCGGGAGCTCACCACGGCGATATGGGGCGAGGGCGGCTTCCAGGGGGAC
CGCGTCAAGCACTGGGAGAACTGGGACATCATGCTTTTCTGGTTCGACGT
GTTGCAGGCGAGTGTTGGCGGGTTGCGGGGGTGGGCGGGTAAGCGGGCGC
GCGGGGCGAGCGAGGGGCGGTGGTGGCAGGTTGCCGTTTTCCCAGCCGGG
CCCCTTGCCATGAAGAAGAAGAAGAAGAAGAAGGAGAAGGAGAAGGAGAA
GAAGAAGAAGAAGAGGAGGAGGAAGAGAGTGTGCTTCGCATTATGTTGCT
AGTGCTTGGGGGTCTGCCTTGCCGGGGCGTGTCTCTCGTCCACCCCAGCT
CTCTCTCTCCCTCTCTCCCTCCCCCCCCCCTCTCTCTCTCTCTCCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTCTCTCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCTCTCCCTCCCTCCCTCTCCCTCTCCCTCTCC
CTCTCCCACTCTCCTTCTCTCTCCCCCCCTCCCCCCCCCCCTCTCTCTCC
GCTGTACTTCGAAGTGGTGTGTGGCACAACTGTTACACAGCAGGCGTGCG
GCACACCAAAAGCACGCACCGTCTTGCAGCAATCCCCTGCGGAccccccc
cCCCCCTGCCCCCACCATTGCAAACCATCTGCCGCCCCGGCCGCTTGCCC
CTCCGCCGCTTGCACCGCCCGGGCCGCCGGGGATACTGCTGTACTTACCT
TGCCACCAAAACTCTGCGGCACGCTGGTGCACCGCAGGCGTACGCCGCCG
CTCCGGCCACCGTGGGGGTGCCCGGAGACTTGACGGCGACCGCGGCGGGC
TTGGTCTACGCCCTGGTGGAGGGGGGTGAGGGGCTCCCGGCGGGGGATGA
GGCCCAAGGCCTCTACCGGGCCGCCTACCGGCGGATGAAGGAGTGGGAAT
CCCTGGGCACGGCGGCCTCCGGGACGGCCAAGATGCTCCTGCTCCTCAAG
GGTACAGGCACCCCCACGACCTAGCGGAGTGACGCGGCTGATTGAGCCGC
GAGCGATGCCGAACCGAGCCTCCAGGGGGCCTGGGGCGGCTGGCAGGGCC
CGGGCCATGTCAGTGGGCCCTGGCCGCGTGTGTATAGTAGAGCTTTGCTT
AGAGTACTTCCAAGTACGCGACATTTGGCTTGTGCGGGTTGTAGCTACGG
TACTTAGCCTGAGTACTGCACATGATAGCAAGATTCGGACGTAGTTTGTG
CTGAGCTTGGTTGTACAGACCTATCCAACTTGAGGCTTGCGCACCATTTG
CAATAGTACTACAGTAGCTGTGCGGCGTAAAAACTTCCGAGACTGTACTG
TCACAGTGCATTCTGGCCGCAGGCCGCGCTTTCAACCTGACAATGTCCGT
CTCTAGGATCTCCCCGAGCCTGAGGGCGCGCTGAATGGTGATCATCATGG
ACTCGGACCCCGTGTCCGTCCGCAGCAAC
back to top

Coding sequence (CDS) from alignment at S-ischiensis_contig10:3392184..3399612+

>mRNA_S-ischiensis_contig10.1644.1 ID=mRNA_S-ischiensis_contig10.1644.1|Name=mRNA_S-ischiensis_contig10.1644.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2742bp|location=Sequence derived from alignment at S-ischiensis_contig10:3392184..3399612+ (Schizocladia ischiensis KU_0333)
ATGTCAAATGCCCCCACGGCGGCGAAGGCGGAGGACGGTGGTGGAGGAGG
GGGCGAGGCGGATGTGTTGGCGGGGGTGCCAACCGAGGTCCTCGAGGCAG
GGTTGACCGACACGTGCATGCATGAGATGTCAAATGCCCCCACGGCGGCG
AAGGCGGAGGACGGTGGTGGAGGAGGGGGCGAGGCGGATGTGTTGGCGGG
GGTGCCAACCGAGGTCCTCGAGGCAGGGTTGACCGACACGTGCATGCATG
AGGTGGGGCACACGCTCGGCCTGCGCCACAACTTCAAGGGGTCTACGTCC
TTGAGCCTGGCGGAGGCGCAGGACCCAGACGTGGTGGCGGAGAAGGGGCT
GACGTCTTCTGTCATGGACTACCTGCCCCTGAACCTTGTGTCCAGGTGGG
GCACACGCTCGGCCTGCGCCACAACTTCAAGGGGTCTACGTCCTTGAGCC
TGGCGGAGGCGCAGGACCCAGACGTGGTGGCGGAGAAGGGGCTGACGTCT
TCTGTCATGGACTACCTGCCCCTGAACCTTGTGTCCAGCAAGCTTCGAGG
GGACAAGAAGCCCCTCTTCTTCACGCCCGTGATCGGCGAGTACGACCGCT
GGGCCATCGAGTACGGCTACACCAAGGCGGAGGGGGAGGGGCTCTTACGG
CAGCACCCGCAAGCTTCGAGGGGACAAGAAGCCCCTCTTCTTCACGCCCG
TGATCGGCGAGTACGACCGCTGGGCCATCGAGTACGGCTACACCAAGGCG
GAGGGGGAGGGGCTCTTACGGCAGCACCCGGACCTGGCCGCGGTGGCTGC
TAAAGCCCTTCCCTTCTCCACGGACGAAGACGGGCCCTCTTCCTCGGGGA
TGGACCCCACCGTATCCACTTTTGACCTGGGGTCCGAGCCTCTGGATTTC
TACGAGGACAAGGACCTGGCCGCGGTGGCTGCTAAAGCCCTTCCCTTCTC
CACGGACGAAGACGGGCCCTCTTCCTCGGGGATGGACCCCACCGTATCCA
CTTTTGACCTGGGGTCCGAGCCTCTGGATTTCTACGAGGACAAGCTGGAT
CTTGTCGCGGAGCTGCGTCCCTCGCTGCTGGACCGCTCTGTGCTGCTGGG
AGCACCCTTCACGGACTTCCAACAGGGGGAAACGGCCCTCCTCACACAGC
TGGATCTTGTCGCGGAGCTGCGTCCCTCGCTGCTGGACCGCTCTGTGCTG
CTGGGAGCACCCTTCACGGACTTCCAACAGGGGGAAACGGCCCTCCTCAC
ACAGGTCCTCGTGGCGGGGCTGTACGCGGCCAAGTACGTCGCCGGCTTCG
AGACCAGCAAGCAGCGGCGGGTGGCCGAGGACACCCCGGCGCCCCTGCGG
GCCGTGTCAGCCGAGAGGCAACGCCGCGCGCTGGCGCTGGTGGTGCGGGT
GCTGTCTGGGGATGCCCCGGACGGCGGGGCGGATTTCCTGCCCGCGCCCG
CCGAGGTGCCGGAAGCGGTGGGGCGGGGGGGGGAGTGCACGGGGATGGAG
CGGTACTGCCTGGCCGTCACGCCGTACGACCTGCTGAGCAAGGTCCTCGT
GGCGGGGCTGTACGCGGCCAAGTACGTCGCCGGCTTCGAGACCAGCAAGC
AGCGGCGGGTGGCCGAGGACACCCCGGCGCCCCTGCGGGCCGTGTCAGCC
GAGAGGCAACGCCGCGCGCTGGCGCTGGTGGTGCGGGTGCTGTCTGGGGA
TGCCCCGGACGGCGGGGCGGATTTCCTGCCCGCGCCCGCCGAGGTGCCGG
AAGCGGTGGGGCGGGGGGGGGAGTGCACGGGGATGGAGCGGTACTGCCTG
GCCGTCACGCCGTACGACCTGCTGAGCAAGGTGTCTCTGGTGAGGAAGCG
GGTCCTCCTCAACCTGGTGTCCCTGGACCGCCTAAAGAGGCTGAGGATAC
ACCGCTGGGCCGACCCGGAGGGGCTCGCTGGGCCGGAGCTCTTCCGGGAG
CTCACCACGGCGATATGGGGCGAGGGCGGCTTCCAGGGGGACCGCGTCAA
GCACTGGGAGAACTGGGACATCATGCTTTTCTGGTTCGACGTGTTGCAGG
TGTCTCTGGTGAGGAAGCGGGTCCTCCTCAACCTGGTGTCCCTGGACCGC
CTAAAGAGGCTGAGGATACACCGCTGGGCCGACCCGGAGGGGCTCGCTGG
GCCGGAGCTCTTCCGGGAGCTCACCACGGCGATATGGGGCGAGGGCGGCT
TCCAGGGGGACCGCGTCAAGCACTGGGAGAACTGGGACATCATGCTTTTC
TGGTTCGACGTGTTGCAGGCGTACGCCGCCGCTCCGGCCACCGTGGGGGT
GCCCGGAGACTTGACGGCGACCGCGGCGGGCTTGGTCTACGCCCTGGTGG
AGGGGGGTGAGGGGCTCCCGGCGGGGGATGAGGCCCAAGGCCTCTACCGG
GCCGCCTACCGGCGGATGAAGGAGTGGGAATCCCTGGGCACGGCGGCCTC
CGGGACGGCCAAGATGCTCCTGCTCCTCAAGGGTACAGGCACCCCCACGA
CCTAGGCGTACGCCGCCGCTCCGGCCACCGTGGGGGTGCCCGGAGACTTG
ACGGCGACCGCGGCGGGCTTGGTCTACGCCCTGGTGGAGGGGGGTGAGGG
GCTCCCGGCGGGGGATGAGGCCCAAGGCCTCTACCGGGCCGCCTACCGGC
GGATGAAGGAGTGGGAATCCCTGGGCACGGCGGCCTCCGGGACGGCCAAG
ATGCTCCTGCTCCTCAAGGGTACAGGCACCCCCACGACCTAG
back to top