mRNA_S-ischiensis_contig10.1638.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig10.1638.1
Unique NamemRNA_S-ischiensis_contig10.1638.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
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BLAST of mRNA_S-ischiensis_contig10.1638.1 vs. uniprot
Match: D7FPH2_ECTSI (UMP-CMP kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPH2_ECTSI)

HSP 1 Score: 285 bits (730), Expect = 6.210e-89
Identity = 153/281 (54.45%), Postives = 196/281 (69.75%), Query Frame = 3 
Query:  336 KPSVIFVLGGPGSGKGTQCQRLATDYGYIHLSAGELLREERASGSPDGQLIDDYIREGKIVPVALSLGLLRRAMSEHPPRARFLIDGFPRNWDNVQGWDSVVGDDAKLERVLFLDCPETVLEKRLMLRGESSGRSDDNQKSAAKRFRTFVDTTLPVVEHYERSNLLSRVDGHRRIEEVAVGVQEALLPTLEAEVLSSTGALLEAAAAGDKAACEQLCAPGMTTT--GDI-----DDASAGAGAGSPPCIMCFRVKVLGRAAVATYLCV----PGVAAAEEG 1145
            KP V+FVLGGPGSGKGTQC+RLA +YGY+HLSAGELLR+ERASGS DGQLIDDYI EG+IVPVA+SL LLR+AM    P +RFLIDGFPRN DN++GWD  +GD A +  VLFL CPE VLEKRL+ RG+SSGR+DDN ++A +RF+T+V+ TLPVVE +++  ++ RVDG++ IE V   V   L    E EVL +    +EA   GD AA  QLCAPGMT    G +     D++++ + + SP  I   +V++L   A A   C     PG+   + G
Sbjct:  172 KPPVVFVLGGPGSGKGTQCERLAKEYGYVHLSAGELLRQERASGSSDGQLIDDYIAEGRIVPVAISLALLRKAMETSEPHSRFLIDGFPRNRDNMEGWDEAMGDVADIRSVLFLYCPEDVLEKRLLSRGKSSGRTDDNAETAKRRFQTYVEMTLPVVEEFQQKGIVPRVDGNQDIESVFRDVLLGLKSVHEKEVLDANRLAVEAVCTGDWAAYAQLCAPGMTEVLGGGLAAVSPDESASASASASPAAISRPQVRMLKGGAAAVVSCERPRGPGLTGGDSG 452
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BLAST of mRNA_S-ischiensis_contig10.1638.1 vs. uniprot
Match: A0A835YW75_9STRA (UMP-CMP kinase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW75_9STRA)

HSP 1 Score: 259 bits (663), Expect = 6.520e-81
Identity = 143/277 (51.62%), Postives = 191/277 (68.95%), Query Frame = 3 
Query:  336 KPSVIFVLGGPGSGKGTQCQRLATDYGYIHLSAGELLREERASGSPDGQLIDDYIREGKIVPVALSLGLLRRAMSEHPPRARFLIDGFPRNWDNVQGWDSVVGDDAKLERVLFLDCPETVLEKRLMLRGESSGRSDDNQKSAAKRFRTFVDTTLPVVEHYERSNLLSRVDGHRRIEEVAVGVQEALLPTLEAEVLSSTGALLEAAAAGDKAACEQLCAPGMTTTG-------------DIDD-----ASAGAGAGSPPCIMCFRVKVLGRAAVATYL 1112
            KP+V+FVLGGPGSGKGTQC+RL+ + GY+HLSAGELLR+ R SGS +G L+D+Y+REG+IVPV LSLGLLR+AM       RFLIDGFPRN DN+ GW+ ++G +A +  VLFL+CPE+VLE RL+ RG SSGRSDDN +SA KRFRT+V+TTLPVVEH++   L+ RVDG + ++ V      AL   +E EV+++T A +EAA   D AA   +C    T  G             D++      ASA A AG+P  ++  R++++G  A+ +YL
Sbjct:    4 KPNVVFVLGGPGSGKGTQCERLSRELGYVHLSAGELLRQARESGSEEGALLDEYLREGRIVPVELSLGLLRKAMIASGG-TRFLIDGFPRNQDNLDGWERIMGKEADVTCVLFLECPESVLEARLLHRGLSSGRSDDNLESARKRFRTYVETTLPVVEHFQSCGLVRRVDGSQDMDTVFANTCAALSDAMEREVMAATRAQIEAATDNDTAAYAAMCCDDATGAGCTGSAAIALKTPADVETWGSKGASANA-AGTPFELLNPRMQIMGNVALLSYL 278
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BLAST of mRNA_S-ischiensis_contig10.1638.1 vs. uniprot
Match: A0A7S2SV26_9STRA (UMP-CMP kinase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV26_9STRA)

HSP 1 Score: 236 bits (603), Expect = 2.320e-72
Identity = 117/198 (59.09%), Postives = 150/198 (75.76%), Query Frame = 3 
Query:  345 VIFVLGGPGSGKGTQCQRLATDYGYIHLSAGELLREERASGSPDGQLIDDYIREGKIVPVALSLGLLRRAMSEHPPRARFLIDGFPRNWDNVQGWDSVVGDDAKLERVLFLDCPETVLEKRLMLRGESSGRSDDNQKSAAKRFRTFVDTTLPVVEHYERSNLLSRVDGHRRIEEVAVGVQEALLPTLEAEVLSSTGAL 938
            VIFVLGGPG+GKGTQC +L  D+G +HLSAGELLR+ERASGSPDGQLI++Y+R+G+IVPV++SLGLLR+AM +    + FL+DGFPRNWDNV+GW+ ++ D A++  VLFLDCPE   E+RL++RGE+SGRSDDN +SA KRF+TF   T+PVV HYE   L+ RV      +EV    + ALLP L       +G L
Sbjct:   84 VIFVLGGPGAGKGTQCAKLVDDFGLVHLSAGELLRKERASGSPDGQLIEEYLRDGRIVPVSISLGLLRQAM-DGDAGSCFLVDGFPRNWDNVEGWNELMQDSAEVLCVLFLDCPEEEQERRLLIRGETSGRSDDNLESARKRFKTFHQETMPVVGHYESLGLVRRVPADGMQDEVYAHTRAALLPLLGDPAEEDSGTL 280
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BLAST of mRNA_S-ischiensis_contig10.1638.1 vs. uniprot
Match: A0A7S2XUB9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUB9_9STRA)

HSP 1 Score: 231 bits (588), Expect = 1.100e-69
Identity = 118/220 (53.64%), Postives = 160/220 (72.73%), Query Frame = 3 
Query:  366 PGSGKGTQCQRLATDYGYIHLSAGELLREERASGSPDGQLIDDYIREGKIVPVALSLGLLRRAMSEHPPRARFLIDGFPRNWDNVQGWDSVVGDDAKLERVLFLDCPETVLEKRLMLRGESSGRSDDNQKSAAKRFRTFVDTTLPVVEHYERSNLLSRVDGHRRIEEVAVGVQEALL--------PTLEAEVLSSTGALLEAAAAGDKAACEQLCAPGMT 1001
            PG+GKGTQC+ +   YG++HLSAGELLR+ERASGSPDGQ+I+D+I+EGKIVPVA++LGLLR+AM E     RFLIDGFPRNWDN+QGW+ V+G  A+++ VLF++CPE  LE+RL+ RGE+SGR+DDN +SA KRF+T+V++T+PVV H++ +  + RV G       AVG  EA+         P L+ E+L  T  LL+A + G+      LC   +T
Sbjct:    1 PGAGKGTQCEMMVQRYGFVHLSAGELLRQERASGSPDGQMIEDFIKEGKIVPVAVTLGLLRKAM-EASKGNRFLIDGFPRNWDNIQGWEEVMGGQAQVDCVLFIECPEAELERRLLHRGETSGRTDDNIESARKRFKTYVESTMPVVHHFDVAGKVRRVPG-------AVGGPEAVFERTRGAVEPFLQDELLQLTKRLLDAISEGNWDIYTDLCHESLT 212
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BLAST of mRNA_S-ischiensis_contig10.1638.1 vs. uniprot
Match: A7SJH0_NEMVE (UMP-CMP kinase n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7SJH0_NEMVE)

HSP 1 Score: 212 bits (540), Expect = 3.650e-64
Identity = 101/183 (55.19%), Postives = 138/183 (75.41%), Query Frame = 3 
Query:  336 KPSVIFVLGGPGSGKGTQCQRLATDYGYIHLSAGELLREERASGSPDGQLIDDYIREGKIVPVALSLGLLRRAMSEHPPRARFLIDGFPRNWDNVQGWDSVVGDDAKLERVLFLDCPETVLEKRLMLRGESSGRSDDNQKSAAKRFRTFVDTTLPVVEHYERSNLLSRVDGHRRIEEVAVGVQ 884
            KP VIFVLGGPG+GKGTQC+R+  +YGY+HLSAGELLREER SGS DG LI++ + EGKIVPVA+++ LL++AM++   + +FLIDGFPRN DN+QGW+S + D   ++ VLF +CPE +   R+M RG+SSGR DDN +S  KRF T  ++T+P++EHY R  L+  + G    +EV + V+
Sbjct:    6 KPVVIFVLGGPGAGKGTQCERIVKEYGYVHLSAGELLREERRSGSKDGDLIENCMTEGKIVPVAITVSLLQKAMAKSDVQ-KFLIDGFPRNEDNLQGWESRMNDKVDVKAVLFFECPEDICIGRIMSRGQSSGRPDDNIESLRKRFHTHENSTMPIIEHYRRQGLVKPISGAPTPDEVFLQVK 187
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BLAST of mRNA_S-ischiensis_contig10.1638.1 vs. uniprot
Match: A0A1V9YWT9_9STRA (UMP-CMP kinase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YWT9_9STRA)

HSP 1 Score: 214 bits (545), Expect = 2.860e-63
Identity = 104/218 (47.71%), Postives = 155/218 (71.10%), Query Frame = 3 
Query:  345 VIFVLGGPGSGKGTQCQRLATDYGYIHLSAGELLREERASGSPDGQLIDDYIREGKIVPVALSLGLLRRAMSEHPPRARFLIDGFPRNWDNVQGWDSVVGDDAKLERVLFLDCPETVLEKRLMLRGESSGRSDDNQKSAAKRFRTFVDTTLPVVEHYERSNLLSRVDGHRRIEEVAVGVQEALLPTLEAEVLSSTGALLEAAAAGDKAACEQLCAPGM 998
            V+FVLGGPG+GKGTQC ++   YG++HLSAG+LLREERASGS +G +ID  IREG IVPV ++L L+R+AM+    R  FLIDGFPRN+DN++GW++ + D   +  VLF DCPE  +E+RL+ RGE+SGR+DDN ++  KRF+T+ ++T+P+++H+   N +  +      E V    Q+A+ P ++A ++++T  LL+A  + D    + LC PG+
Sbjct:    9 VLFVLGGPGAGKGTQCAKIVAQYGFVHLSAGDLLREERASGSANGDMIDRMIREGAIVPVKVTLDLIRKAMNASG-RDLFLIDGFPRNFDNLEGWNAEMSD-VDVAGVLFYDCPEDEMERRLLKRGETSGRTDDNAEAIRKRFKTYTESTMPIIDHFAAQNKVFHILATASPEAVFEETQKAIEPIVKAHLVATTQRLLDAVFSNDWVTYQALCDPGL 224
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BLAST of mRNA_S-ischiensis_contig10.1638.1 vs. uniprot
Match: A0A0D2W1M1_CAPO3 (UMP-CMP kinase n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2W1M1_CAPO3)

HSP 1 Score: 211 bits (537), Expect = 3.070e-63
Identity = 100/185 (54.05%), Postives = 137/185 (74.05%), Query Frame = 3 
Query:  336 KPSVIFVLGGPGSGKGTQCQRLATDYGYIHLSAGELLREERAS-GSPDGQLIDDYIREGKIVPVALSLGLLRRAMSEHPPRARFLIDGFPRNWDNVQGWDSVVGDDAKLERVLFLDCPETVLEKRLMLRGESSGRSDDNQKSAAKRFRTFVDTTLPVVEHYERSNLLSRVDGHRRIEEVAVGVQE 887
            KP V+FVLGGPGSGKGTQC+R+  ++G++HLSAG+LLR ERA   S +G+LID YIREGKIVPV ++  LL  AM+ +P ++ FLIDGFPRN DNV GWD+VVG    L+ VLF DCPE    +R + RG +SGR+DDN++S  KRF T+   T+P+V +++R  L+ ++D  R ++EV   V++
Sbjct:   40 KPHVVFVLGGPGSGKGTQCERIVQEFGFVHLSAGDLLRAERAKPASKNGELIDKYIREGKIVPVQITCTLLAEAMALNPTKS-FLIDGFPRNQDNVAGWDAVVGPSVNLDFVLFFDCPEATCVQRALQRGLTSGRTDDNKESLTKRFHTYESETMPIVNYFDRKGLVRKIDSTRSVDEVFADVKK 223
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BLAST of mRNA_S-ischiensis_contig10.1638.1 vs. uniprot
Match: A0A3M6VSZ5_9STRA (UMP-CMP kinase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VSZ5_9STRA)

HSP 1 Score: 209 bits (533), Expect = 4.380e-63
Identity = 98/176 (55.68%), Postives = 140/176 (79.55%), Query Frame = 3 
Query:  345 VIFVLGGPGSGKGTQCQRLATDYGYIHLSAGELLREERASGSPDGQLIDDYIREGKIVPVALSLGLLRRAMSEHPPRARFLIDGFPRNWDNVQGW-DSVVGDDAKLERVLFLDCPETVLEKRLMLRGESSGRSDDNQKSAAKRFRTFVDTTLPVVEHYERSNLLSRVDGHRRIEEV 869
            ++FVLGGPG+GKGTQC +L   YG++HLSAG+LLREER SGS +G++ID  I+EG+IVPV ++L LL++AM +   R  FLIDGFPRN+DN+QGW D +  ++ +++ VLF DCPE V+E+RL+ RG++SGR+DDN ++  KRFRT++D+T+PV+ HYE+ N + +VD  R  +EV
Sbjct:    9 ILFVLGGPGAGKGTQCMKLVQKYGFVHLSAGDLLREERESGSANGEMIDRMIKEGQIVPVKITLNLLQQAMVKSG-RDLFLIDGFPRNFDNLQGWQDEMAEEEYQVQGVLFYDCPENVMEERLLERGKTSGRADDNTEAIHKRFRTYLDSTMPVITHYEKQNKVFKVDATRGPDEV 183
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BLAST of mRNA_S-ischiensis_contig10.1638.1 vs. uniprot
Match: M4BUB8_HYAAE (UMP-CMP kinase n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BUB8_HYAAE)

HSP 1 Score: 209 bits (533), Expect = 9.170e-63
Identity = 99/186 (53.23%), Postives = 141/186 (75.81%), Query Frame = 3 
Query:  345 VIFVLGGPGSGKGTQCQRLATDYGYIHLSAGELLREERASGSPDGQLIDDYIREGKIVPVALSLGLLRRAMSEHPPRARFLIDGFPRNWDNVQGWDSVVGDDA-KLERVLFLDCPETVLEKRLMLRGESSGRSDDNQKSAAKRFRTFVDTTLPVVEHYERSNLLSRVDGHRRIEEVAVGVQEALLP 899
            ++FVLGGPG+GKGTQC +L   +G++HLSAG+LLREER SGS +GQLID+ I+EG+IVPV ++L LL++AM +   R  FLIDGFPRN+DN+QGW   + +D   +E VLF DC E V+E+RL+ RG++SGRSDDN ++  KRFRT++D+T+PV++HYE  + + +VD  R +++V       + P
Sbjct:   32 ILFVLGGPGAGKGTQCTKLVEKFGFVHLSAGDLLREERQSGSVNGQLIDNMIKEGQIVPVKITLSLLQQAMVKSG-RDLFLIDGFPRNFDNLQGWQEAMPEDEFHVEGVLFFDCNERVMEERLLERGKTSGRSDDNAEAIRKRFRTYLDSTMPVIQHYEEQDKVFKVDATRGVDDVFAATSAVIQP 216
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BLAST of mRNA_S-ischiensis_contig10.1638.1 vs. uniprot
Match: UPI00106D6E0D (UMP-CMP kinase-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106D6E0D)

HSP 1 Score: 208 bits (530), Expect = 1.120e-62
Identity = 98/190 (51.58%), Postives = 139/190 (73.16%), Query Frame = 3 
Query:  339 PSVIFVLGGPGSGKGTQCQRLATDYGYIHLSAGELLREERASGSPDGQLIDDYIREGKIVPVALSLGLLRRAMSEHPPRARFLIDGFPRNWDNVQGWDSVVGDDAKLERVLFLDCPETVLEKRLMLRGESSGRSDDNQKSAAKRFRTFVDTTLPVVEHYERSNLLSRVDGHRRIEEVAVGVQEALLPTLE 908
            P V FVLGGPG+GKGTQC+++   +G++HLSAGELLR+ER SGS DG LI DYI+EGKIVPVA+++ LL++AM   P + RFL+DGFPRN DN+QGW   +     ++ VLF DCPE    +R++ RG++SGR+DDN  S  KRF+T+ + T+P++++YE+ NL+  +   R  +E+   V+EA+   LE
Sbjct:    6 PVVAFVLGGPGAGKGTQCEKIVETFGFVHLSAGELLRQERDSGSKDGNLIQDYIKEGKIVPVAITISLLQKAMKNSPVK-RFLVDGFPRNEDNLQGWSERMDGIVDVKCVLFFDCPEEECIRRIVERGKTSGRTDDNIDSLRKRFKTYKEQTMPIIKYYEKLNLVKTIPAARTPDEIFEDVKEAINAILE 194
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig10.1638.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPH2_ECTSI6.210e-8954.45UMP-CMP kinase n=2 Tax=Ectocarpus TaxID=2879 RepID... [more]
A0A835YW75_9STRA6.520e-8151.62UMP-CMP kinase n=2 Tax=Tribonema minus TaxID=30337... [more]
A0A7S2SV26_9STRA2.320e-7259.09UMP-CMP kinase n=1 Tax=Rhizochromulina marina TaxI... [more]
A0A7S2XUB9_9STRA1.100e-6953.64Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A7SJH0_NEMVE3.650e-6455.19UMP-CMP kinase n=2 Tax=Nematostella vectensis TaxI... [more]
A0A1V9YWT9_9STRA2.860e-6347.71UMP-CMP kinase n=1 Tax=Achlya hypogyna TaxID=12027... [more]
A0A0D2W1M1_CAPO33.070e-6354.05UMP-CMP kinase n=1 Tax=Capsaspora owczarzaki (stra... [more]
A0A3M6VSZ5_9STRA4.380e-6355.68UMP-CMP kinase n=1 Tax=Peronospora effusa TaxID=54... [more]
M4BUB8_HYAAE9.170e-6353.23UMP-CMP kinase n=2 Tax=Hyaloperonospora arabidopsi... [more]
UPI00106D6E0D1.120e-6251.58UMP-CMP kinase-like n=1 Tax=Dendronephthya gigante... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig10contigS-ischiensis_contig10:3339284..3344537 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score286.2
Seed ortholog evalue2.2e-74
Seed eggNOG ortholog2880.D7FPH2
KEGG rclassRC00002
KEGG koko:K13800
KEGG ReactionR00158,R00512,R01665,R11891,R11892
KEGG Pathwayko00240,ko00983,ko01100,map00240,map00983,map01100
KEGG ModuleM00052
EggNOG free text desc.cytidylate kinase activity
EggNOG OGsCOG0563@1,KOG3079@2759
EC2.7.4.14
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionAdenylate kinase/UMP-CMP kinase
Ec32 orthologEc-14_004920.1
Exons6
Model size1163
Cds size1131
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815542.2972522-UTR-S-ischiensis_contig10:3339283..33393151622815542.2972522-UTR-S-ischiensis_contig10:3339283..3339315Schizocladia ischiensis KU_0333UTRS-ischiensis_contig10 3339284..3339315 +
1695739758.5328388-UTR-S-ischiensis_contig10:3339283..33393151695739758.5328388-UTR-S-ischiensis_contig10:3339283..3339315Schizocladia ischiensis KU_0333UTRS-ischiensis_contig10 3339284..3339315 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815542.3094828-CDS-S-ischiensis_contig10:3339315..33393531622815542.3094828-CDS-S-ischiensis_contig10:3339315..3339353Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3339316..3339353 +
1695739758.545093-CDS-S-ischiensis_contig10:3339315..33393531695739758.545093-CDS-S-ischiensis_contig10:3339315..3339353Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3339316..3339353 +
1622815542.3219154-CDS-S-ischiensis_contig10:3339455..33398001622815542.3219154-CDS-S-ischiensis_contig10:3339455..3339800Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3339456..3339800 +
1695739758.5570035-CDS-S-ischiensis_contig10:3339455..33398001695739758.5570035-CDS-S-ischiensis_contig10:3339455..3339800Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3339456..3339800 +
1622815542.3347867-CDS-S-ischiensis_contig10:3341071..33412791622815542.3347867-CDS-S-ischiensis_contig10:3341071..3341279Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3341072..3341279 +
1695739758.5703952-CDS-S-ischiensis_contig10:3341071..33412791695739758.5703952-CDS-S-ischiensis_contig10:3341071..3341279Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3341072..3341279 +
1622815542.345092-CDS-S-ischiensis_contig10:3342700..33428771622815542.345092-CDS-S-ischiensis_contig10:3342700..3342877Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3342701..3342877 +
1695739758.5813582-CDS-S-ischiensis_contig10:3342700..33428771695739758.5813582-CDS-S-ischiensis_contig10:3342700..3342877Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3342701..3342877 +
1622815542.355378-CDS-S-ischiensis_contig10:3343733..33439131622815542.355378-CDS-S-ischiensis_contig10:3343733..3343913Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3343734..3343913 +
1695739758.5898197-CDS-S-ischiensis_contig10:3343733..33439131695739758.5898197-CDS-S-ischiensis_contig10:3343733..3343913Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3343734..3343913 +
1622815542.367475-CDS-S-ischiensis_contig10:3344354..33445371622815542.367475-CDS-S-ischiensis_contig10:3344354..3344537Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3344355..3344537 +
1695739758.6009126-CDS-S-ischiensis_contig10:3344354..33445371695739758.6009126-CDS-S-ischiensis_contig10:3344354..3344537Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3344355..3344537 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig10.1638.1prot_S-ischiensis_contig10.1638.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig10 3339316..3344537 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig10.1638.1

>prot_S-ischiensis_contig10.1638.1 ID=prot_S-ischiensis_contig10.1638.1|Name=mRNA_S-ischiensis_contig10.1638.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=377bp
MRSIWALGLVASMRGLGTSAFLGASRALMAQPARQRARFNTAMLVGASSG
LTRARGSSRFAAAVVATMLTARASAHAMGGSKAPKLAATASPSTPVRQES
AKPSVIFVLGGPGSGKGTQCQRLATDYGYIHLSAGELLREERASGSPDGQ
LIDDYIREGKIVPVALSLGLLRRAMSEHPPRARFLIDGFPRNWDNVQGWD
SVVGDDAKLERVLFLDCPETVLEKRLMLRGESSGRSDDNQKSAAKRFRTF
VDTTLPVVEHYERSNLLSRVDGHRRIEEVAVGVQEALLPTLEAEVLSSTG
ALLEAAAAGDKAACEQLCAPGMTTTGDIDDASAGAGAGSPPCIMCFRVKV
LGRAAVATYLCVPGVAAAEEGEEEPAE
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mRNA from alignment at S-ischiensis_contig10:3339284..3344537+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig10.1638.1 ID=mRNA_S-ischiensis_contig10.1638.1|Name=mRNA_S-ischiensis_contig10.1638.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=5254bp|location=Sequence derived from alignment at S-ischiensis_contig10:3339284..3344537+ (Schizocladia ischiensis KU_0333)
CAGCAACAACGAACCTGAGTGCCAGAGAGGGCATGCGTTCCATTTGGGCA
CTGGGCTTAGTGGCCTCTATGTGAGTATGTCACGCTACGCATTGCCATGT
CGGCTGGGGGGGAGATGTATCGTCATTCTAACATCCCTGCTTGCGGCAAC
TCCGCCCTATCCCGGTTGGCAGGCGAGGGCTCGGCACCAGCGCCTTTCTG
GGCGCGTCCCGGGCATTGATGGCGCAACCTGCTCGTCAGAGGGCGAGATT
CAATACCGCTATGTTGGTCGGTGCGAGCTCTGGCCTGACTAGGGCCCGAG
GAAGCTCACGCTTCGCCGCGGCCGTGGTGGCTACGATGCTGACCGCGCGA
GCCTCCGCTCACGCCATGGGCGGATCCAAGGCCCCAAAACTGGCGGCAAC
CGCCTCGCCGTCGACACCAGTGAGGCAAGAGTCAGCAAAGCCCTCTGTCA
TTTTCGTGCTCGGAGGTCCTGGCTCGGGAAAGGGCACGCAGTGCCAACGA
CTGGCCACGGACTATGGGTGAGTCTGCGTGTACGTGACGGTTCCAACTTG
GGGTACAGTGGACCCATGGACGCACTCTGGTGGCAAGGCTGGCAGGTTTC
CGTCTGGCCCATGCGCTTGTGCGCTTGAACGAGAGTCCCGCGCCCAGAGT
AGGCAGGCACGGGGAGGCTGTGCCCTCCTCTGGCCTCCGCATCCCCGACC
TGAATCCAATTCCGTGGACCTACTGCAGGACATCACTAGTGTGTGCATGT
GTAGGATGCATGGGAGGGGTGCGTGCGTGCACATGTGTGTGTGCCTGCCT
ACCGTTCATGCAATCTTTCGATGCACATCGCGCTCGCGCTCGCGCCACAG
CAGTGTCGCGCCTGGTGCCGCCGGCCAGCCCCGTAAAAGGGCAGCCTACA
GCCTTCGCCGCGCCCTCGATACATCCTACTACTAGTACTGTACTCCTGCT
ACAGCAGTAGAGCCAATACTGTGGTAAGCCGTGCTACATGGTAGTAAAGT
TTTGGCTTGCACGCTTTGTCTTTTCTCACGAGCATTGGGAGCCTGCTCGC
ACCCACTGCTACAGAGGTGCTGCCTGTAGCATCCCCCCCATTCTGAAAAC
CCACAATGCAGAGCCTTCCCTGCTGCTGCTGGCACCGCGGGCCTTGACCC
CTCCCCTTTGTCTCTCTGTGCCCGACTGCTAGGCTGGTGGTGTTCCGGGT
GCCTGGCCCCTCCGTCCCTCCCCCTCTCCCTCCCAACGCCTCCGTGGTGT
CCCGCAAGCAGTGATGGGATATCCATCAGTAGATAGTTATCGGGCTCGAC
TGTTTTGGTGGGTGGCGTTACTAAGTACTTGGATTTAGTGTGGGTCAAAC
TATCAAATATCGAGTGTCGATAGATATATACTTCTAAGTAGATCAGTAGT
GTCGATAAATAGGTTGATTTGCTTCGATGTTCCATCACTGCCCACAAGGG
GCGGCGGGGCGGGGGTCAGGACTCGCCGCCTGCCTGCTAGCACTACTGTA
GCGTCTGAACTTTTACCATCCCTTTGGAAAATGTGGAAACGCTGGGCCGC
AGAAGTACCGGGCGGACTACTGCAGAGACATACAAGAAACCCACTCAGAA
CAACTGGGTCCCTTTTCGGCCCCGATGCCCGGTAACTTACAGTAGTCCAA
GTCGGACCGAATTTCCTTCCTTTGCCTCCTATCCAGGATCGCGCCAATAA
GCCTCCTCGCCCGCTCCACTCCACCGGGGCCCTCTTTTTGCGCCGCTCGG
CTCTGGTTTCGTCGGCGCGCTCGGTTGCGCCGGCCCAGCTACATCCACCT
TTCGGCCGGGGAGCTGCTGCGGGAGGAGCGGGCCAGTGGGTCGCCGGACG
GGCAGCTCATCGACGACTACATCCGGGAGGGCAAGATCGTGCCGGTGGCC
CTTTCGCTGGGGCTGCTGCGGCGGGCCATGAGCGAACACCCCCCGCGGGC
CCGCTTCCTCATCGACGGTTTCCCGAGGAACTGGGACAACGTCCAGGTGT
GGATCTTGGGCGGGGGGGTTGAACTGCTCCTCTTGTGTGCGCGGTGGTGG
GTCGGTCTCCGTGTCTCCTCTGTCCATCTGTCCCTCCCTCTCTCTCGCTT
TCATTCTCTCGCTCCTTCCCCCCGCCTCTCTCTTTCTCTCTGCTTGTCTG
TGTCTCGTGTATCCTCTCCGGCGGGCACCGGGGTATTTGAGCTGGGGACG
GAGGTGGAAGACACCGTGGCCGCCCGCCTTCTCTCTTCGTGAGCTTTTAT
TGTTTGTTGTTATACATGGGCATTGTCGGTGACCTAGCGGTTGCGATCGA
TCATCTTCATCGTTCCTGCCGTGACCGTTAGGATGCCGGTGCGCCCAAGA
GCAACTCTGCGCAGCGACTCACACAAGTACTCGCCGACGGCTACGCTTTG
TCGTGGTCTAGCGAGCGGCCCCTCATCTGGCTTGCCGACGCCAAGGCGTC
ATGGCATTCCGGGCTTGGCCAGTGCACTGCCTGGCCGGTGCAAACCCGGC
ATGCTCCGTCCCGGCCTAGTTGGGATGCGAGAGTCCATGGCTAAATAGCT
ACTCCTGTCGGAGGGCAAACACGAAGTTTCGACTTAGGGCTGTCGGCATT
GCACGCACGGTTATGTCGCAAGACAAGCCAATGAGTACATATATACCCCG
TGAGTGTGCTCGGTGTGCCACAGTCCTCTTAAGGGTTTACCAATAACTCT
TAGCCGAGTTGCATTCCGCTCGAATCTTGCAGTAGAGGAGTTGTGTGATA
TATGTACCAGTACTCATTGGCTTGTCTTGCACATACGTAATCTTGTGTGC
TTCGCCGACAGCCCTACTACATAGTAAGTCAAAACTCCAGGTTAGCCCTC
CGACAGGGGTACTACAGTACATACATAGCTCTTTACTCTAGCCATGGACT
CTCAAATACATGACGGTACCCTAAACCACAGCACGGGACGTTCAGTGTGG
GATCCGTGAGGCCCCTGGAACCCGTTCAAGCTCAGGCAGGCAACAAGCCC
GCGGCCCGGGCCCCTGGCCCCGTACCACCCCCCGCGCAAGTTGCCCGTAT
GGGCCGACCGCGCCGCCATTCTGCCCCCCCTTGCGAGCACCGCCGCCCCC
ACCGCTGCAGCCCCATCTGCTCCGGCTTGTGCGCCTACTCGTACACTGAC
TGGTCGCGGCTGCTGCTGCCGCCACTCCTACCGCCACTGCTTGCCATTGC
TGCTGCTGCTGCTGCTGCCGCCGCCGCCGCTGCTGCCGCCGCCGCTGCTG
CTGCTGCTGCTGCTGCCGCTGCTGCTGCCGCCGCCGCCGCCGCCGCCGCC
GCCGCTGCCGCTGCTGCTGCTGCTGCTGCTGCTCCTGCCGCTGGCTGCTG
GCGCTTCTGCTGCCGCCGCCATGACCACCGCCGCCGCCGCCGCCGCCGCC
GCCCGGCGCCTCGGAAGGGATGGGACAGCGTGGTGGGGGACGACGCAAAG
CTGGAGCGCGTGCTGTTCCTGGACTGTCCGGAGACGGTCCTGGAGAAACG
CCTGATGCTGCGTGGCGAGAGCAGCGGGCGCAGCGACGACAACCAAAAGT
CGGCCGCCAAGCGCTTCCGCACCTTTGTCGACACCACGCTCCCGGTGAGC
CCCCGTATTTATTGGTGGCAGAACTTCGAAACATACCAGTATACCTAGCA
AGTACTCGCTTGTACTTGTAGGGCGCGTACTGTACTGCACAGTGCAGTAT
AGTACGTGTACTGTACAATACAGCACAGTCCAGTACAGTGCAGTGGTACT
GTACAGTGCGTGCTTGCGAGTCCGTACTGTAGTGCTCCTGATGTACCAGT
ACCACGTAGTTAGAGCTGTGTGTCATATCTGCGCCCATGTATTCAGTTAG
GTCAATATCGGCGTTTTCGCGCACACCGAACACCCATCCTAGACCCACTC
ATTGTATGCTTGGGTGCGTTTCTCCGCTCCAAATCGTGCGTAGCTATTTC
ACAGCTCGCCGAGTACCCAGCCCGTTGCGCGCCAATACTCGATAGCCCGC
CTCAAAGTGAAGTATCGATTGTCGATCAGTCGCAAGGCCGGCATATCAAA
AACGATGATCCGCCCCCCGATACGGCAGGCGCAGCGGAATAAGCACTCGC
ATACGCACTTTGAAGTGCACTCGGCACTCGAGTAATACATCGAGTAATAC
TACAGCAAGCTACAGATGGCCAGCGATCCGCGAGAAGGGAGCAAAGACGA
GGATCCTTCGGGTCCAGGGCATGCGCAGAGACGAGGAAGCTCGTCCGAAC
ATGAGTATATAGAGCTCTATGTACTCTACTCACATGGTGCTTGCCGTGGT
CCCGAGACCATTGACCACGCGCCTCGGTCAAGACGGAGCAGGACTTGAAT
ACACACAATACTTCGAAGTAGAGTACTTCGTACTCGAGTACTACTGCAAG
CACGCCGTGAACGAGCCCGGCGGCGTCGGCGGATACCGCGGATACGCCAG
GTGGTGGAGCACTACGAGCGGAGCAACCTCCTGTCGCGCGTGGACGGGCA
CCGGAGAATAGAAGAGGTGGCGGTGGGCGTGCAGGAGGCCCTGTTGCCCA
CCCTGGAGGCGGAGGTGCTGAGCTCCACCGGGGCACTGCTGGAGGCGGCG
GCGGCCGGGGACAAAGCGGCGTGCGAGCAGGCGAGTGGAGTGGAGTGCTG
CTTGTGCTGAAACTACTTCCTCCCTGTGGCCCGCACCTCTCCCCGTGTTC
CACCTTGTAATACTTCGAAGTACTTGATTAGAACGGCGCAAATTTCCGGA
CATCTCCGCATGTTTAAACCGAGCCGTCTGGCGAGGGGTTTCTAACACAC
CCCTTGTGCTGAGTGCTGCTGCACTGTGCTGTGCTGTAATTCCCCCAACC
GCCCCCGGCCGGATGCGGCGCGATGCGATGCGATGAAATGATGTGATGTG
AAACTGCTTGGTGCCGTACTCGTACATTGTTACCCCGCGATTTGCGTCGC
ATGGCATGCGTCGAATTGGCACCGAGCGGGCGTGACGCGAGTACCCCGCC
CTTGCTCCCCCCCTCCCCTCCCCTCCTCTCCTCTCCCCTCCCCTCCCATC
CCCTCCCTCGCGCTCCCGCAGCTCTGCGCCCCGGGCATGACCACGACCGG
GGACATCGACGACGCCTCGGCAGGCGCGGGGGCAGGCAGCCCACCATGCA
TCATGTGCTTTCGGGTGAAAGTTCTGGGACGGGCCGCGGTCGCCACCTAC
CTTTGCGTGCCCGGAGTGGCGGCGGCGGAGGAGGGAGAGGAGGAACCGGC
GGAG
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Coding sequence (CDS) from alignment at S-ischiensis_contig10:3339284..3344537+

>mRNA_S-ischiensis_contig10.1638.1 ID=mRNA_S-ischiensis_contig10.1638.1|Name=mRNA_S-ischiensis_contig10.1638.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2262bp|location=Sequence derived from alignment at S-ischiensis_contig10:3339284..3344537+ (Schizocladia ischiensis KU_0333)
ATGCGTTCCATTTGGGCACTGGGCTTAGTGGCCTCTATATGCGTTCCATT
TGGGCACTGGGCTTAGTGGCCTCTATGCGAGGGCTCGGCACCAGCGCCTT
TCTGGGCGCGTCCCGGGCATTGATGGCGCAACCTGCTCGTCAGAGGGCGA
GATTCAATACCGCTATGTTGGTCGGTGCGAGCTCTGGCCTGACTAGGGCC
CGAGGAAGCTCACGCTTCGCCGCGGCCGTGGTGGCTACGATGCTGACCGC
GCGAGCCTCCGCTCACGCCATGGGCGGATCCAAGGCCCCAAAACTGGCGG
CAACCGCCTCGCCGTCGACACCAGTGAGGCAAGAGTCAGCAAAGCCCTCT
GTCATTTTCGTGCTCGGAGGTCCTGGCTCGGGAAAGGGCACGCAGTGCCA
ACGACTGGCCACGGACTATGGGCGAGGGCTCGGCACCAGCGCCTTTCTGG
GCGCGTCCCGGGCATTGATGGCGCAACCTGCTCGTCAGAGGGCGAGATTC
AATACCGCTATGTTGGTCGGTGCGAGCTCTGGCCTGACTAGGGCCCGAGG
AAGCTCACGCTTCGCCGCGGCCGTGGTGGCTACGATGCTGACCGCGCGAG
CCTCCGCTCACGCCATGGGCGGATCCAAGGCCCCAAAACTGGCGGCAACC
GCCTCGCCGTCGACACCAGTGAGGCAAGAGTCAGCAAAGCCCTCTGTCAT
TTTCGTGCTCGGAGGTCCTGGCTCGGGAAAGGGCACGCAGTGCCAACGAC
TGGCCACGGACTATGGCTACATCCACCTTTCGGCCGGGGAGCTGCTGCGG
GAGGAGCGGGCCAGTGGGTCGCCGGACGGGCAGCTCATCGACGACTACAT
CCGGGAGGGCAAGATCGTGCCGGTGGCCCTTTCGCTGGGGCTGCTGCGGC
GGGCCATGAGCGAACACCCCCCGCGGGCCCGCTTCCTCATCGACGGTTTC
CCGAGGAACTGGGACAACGTCCAGCTACATCCACCTTTCGGCCGGGGAGC
TGCTGCGGGAGGAGCGGGCCAGTGGGTCGCCGGACGGGCAGCTCATCGAC
GACTACATCCGGGAGGGCAAGATCGTGCCGGTGGCCCTTTCGCTGGGGCT
GCTGCGGCGGGCCATGAGCGAACACCCCCCGCGGGCCCGCTTCCTCATCG
ACGGTTTCCCGAGGAACTGGGACAACGTCCAGGGATGGGACAGCGTGGTG
GGGGACGACGCAAAGCTGGAGCGCGTGCTGTTCCTGGACTGTCCGGAGAC
GGTCCTGGAGAAACGCCTGATGCTGCGTGGCGAGAGCAGCGGGCGCAGCG
ACGACAACCAAAAGTCGGCCGCCAAGCGCTTCCGCACCTTTGTCGACACC
ACGCTCCCGGGATGGGACAGCGTGGTGGGGGACGACGCAAAGCTGGAGCG
CGTGCTGTTCCTGGACTGTCCGGAGACGGTCCTGGAGAAACGCCTGATGC
TGCGTGGCGAGAGCAGCGGGCGCAGCGACGACAACCAAAAGTCGGCCGCC
AAGCGCTTCCGCACCTTTGTCGACACCACGCTCCCGGTGGTGGAGCACTA
CGAGCGGAGCAACCTCCTGTCGCGCGTGGACGGGCACCGGAGAATAGAAG
AGGTGGCGGTGGGCGTGCAGGAGGCCCTGTTGCCCACCCTGGAGGCGGAG
GTGCTGAGCTCCACCGGGGCACTGCTGGAGGCGGCGGCGGCCGGGGACAA
AGCGGCGTGCGAGCAGGTGGTGGAGCACTACGAGCGGAGCAACCTCCTGT
CGCGCGTGGACGGGCACCGGAGAATAGAAGAGGTGGCGGTGGGCGTGCAG
GAGGCCCTGTTGCCCACCCTGGAGGCGGAGGTGCTGAGCTCCACCGGGGC
ACTGCTGGAGGCGGCGGCGGCCGGGGACAAAGCGGCGTGCGAGCAGCTCT
GCGCCCCGGGCATGACCACGACCGGGGACATCGACGACGCCTCGGCAGGC
GCGGGGGCAGGCAGCCCACCATGCATCATGTGCTTTCGGGTGAAAGTTCT
GGGACGGGCCGCGGTCGCCACCTACCTTTGCGTGCCCGGAGTGGCGGCGG
CGGAGGAGGGAGAGGAGGAACCGGCGGAGCTCTGCGCCCCGGGCATGACC
ACGACCGGGGACATCGACGACGCCTCGGCAGGCGCGGGGGCAGGCAGCCC
ACCATGCATCATGTGCTTTCGGGTGAAAGTTCTGGGACGGGCCGCGGTCG
CCACCTACCTTTGCGTGCCCGGAGTGGCGGCGGCGGAGGAGGGAGAGGAG
GAACCGGCGGAG
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