mRNA_S-ischiensis_contig10.1636.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig10.1636.1 vs. uniprot
Match: A0A836C6X3_9STRA (BZIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6X3_9STRA) HSP 1 Score: 172 bits (436), Expect = 6.860e-43 Identity = 104/225 (46.22%), Postives = 145/225 (64.44%), Query Frame = 2
Query: 140 EQKAVVERERNRLHARNARARKKQYVEELKDRVDQLHAQKEEVQRKRESAAKKMQDEKDAHRETLLLALRMRADGVQDEEQWAKVLMETFRLTLPLTPYRSHAAGDICHDRRVMTGVEGMAADTESLTAMRTALGSRGAVGDDKRLVSVEYALGS--SETMFTSSDGLMSTFTMRTTDARACGCTAELEKVGMLRARFSGAGKLEELDMMFDAISFHNQYTKAMG 808
E++ ERERNR+HARN RARKK Y +EL ++ L +KEE ++ A+K ++ A TL A+ +RA G DE QW+K+L E F++T+P+TPYRS + D+ ++RRV+ GV+GM ADT SL M +G++ + + V VEY LGS +E F + GLM TF MRT DA+A G E EK G+LRARF AG +EEL+M FD I+ ++Q +A G
Sbjct: 51 EERKKQERERNRMHARNTRARKKAYADELTAKLAALTKEKEEHEKAEAEASKARTVQQSAWAATLRQAMDLRAAGCLDEAQWSKILAEDFKMTMPVTPYRSFSPSDVVNNRRVLLGVDGMVADTASLQVMLDNIGTKTRKNEGR--VRVEYLLGSDAAENCFFGAAGLMCTFMMRTLDAKAHGAACECEKSGILRARFDDAGCIEELEMAFDGIAMYHQLMRAKG 273
BLAST of mRNA_S-ischiensis_contig10.1636.1 vs. uniprot
Match: A0A6H5KLB1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLB1_9PHAE) HSP 1 Score: 147 bits (370), Expect = 2.920e-35 Identity = 100/242 (41.32%), Postives = 136/242 (56.20%), Query Frame = 2
Query: 146 KAVVERERNRLHARNARARKKQYVEELKDRVDQLHAQKEEVQRKRESAAKKMQDEKDAHRETLLLALRMRADGVQDEEQWAKVLMETFRLTLPLTPYRSHAAGDICHDRR-VMTGVEGMAADTESLTAMRTALGSR----GAVGDD----------------KRLVSVEYALGSSETMFTSSDGLMSTFTMRTTDARACGCTAELEKVGMLRARFSGAGKLEELDMMFDAISFHNQYTKAMG 808
K + +ERNRLHARN RARKKQY+EELKD+V+ LHA++ + +E ++ +++ TL L +R GV D W +VL E F L+LPLTPYR D+ RR V+ GVEGM +DT SLT M L R G + + V ++ + + + +F+S G+M F+M T DA G E+EK GMLRA F GKL+EL++MFD I+ H Q KAMG
Sbjct: 53 KTEMAKERNRLHARNTRARKKQYMEELKDKVESLHAKRAAAEHNKEXXXREDEEKIARWAATLKNVLDLRCQGVVDPAVWNEVLTEDFELSLPLTPYRKFDPADVEGGRRRVLVGVEGMISDTASLTEMCENLAERCRQKGGLSPPXXXXXXXXXXXXXQPPRPRVHLKSCVSNGDMVFSSDRGIMCVFSMTTVDACDFGSPLEVEKNGMLRATFVEGGKLDELEIMFDGIAVHQQLQKAMG 294
BLAST of mRNA_S-ischiensis_contig10.1636.1 vs. uniprot
Match: A0A835YMV0_9STRA (BZIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMV0_9STRA) HSP 1 Score: 107 bits (267), Expect = 5.120e-21 Identity = 74/207 (35.75%), Postives = 106/207 (51.21%), Query Frame = 2
Query: 173 RLHARNARARKKQYVEELKDRVDQLHAQKEEVQRKRESAAKKMQDEKDAHRETLLLALRMRADGVQDEEQWAKVLMETFRLTLPLTPYRSHAAGDICHDRRVMTGVEGMAADTESLTAMRTALGSRGA-VGDDKRLVSVEYALGSSETMFTSSDGLMSTFTMRTTDARACGCTAELEKVGMLRARFSGAGKLEELDMMFDAISFHNQ 790
R++ARN R +KKQ+V+ LK +V++L QK QW + L E F++TLP+ PYRS DI +++RV TG+EGM D S+ + L + G V Y+L S +F ++GLM TF RTT A A G AE GM RA F+G G+L+ELD+++DAIS+++Q
Sbjct: 37 RVNARNTRLKKKQHVDTLKAQVEELSQQK---------------------------------------AQWQEFLTEGFKMTLPVMPYRSFNPADIVNNKRVATGIEGMCQDAASVATLCDCLSAAHPYTGASHPKPQVAYSLADSH-VFAGAEGLMGTFMARTTGAVARGAKAEAAHSGMFRAMFAGDGRLDELDLIYDAISYYHQ 203
BLAST of mRNA_S-ischiensis_contig10.1636.1 vs. uniprot
Match: A0A8J2WXK6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WXK6_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 1.990e-13 Identity = 68/227 (29.96%), Postives = 115/227 (50.66%), Query Frame = 2
Query: 128 TLTSEQKAVVERERNRLHARNARARKKQYVEELKDRV---DQLHAQKEEVQRKRESAAKKMQDEKDAHRETLLLALRMRADGVQDEEQWAKVLMETFRLTLPLTPYRSHAAGDICHDRRVMTGVEGMAADTESLTAMRTALGSRGAVGDDKRLVSVEYALGSSETMFTS---------SDGLMSTFTMRTTDARACGCTAELEKVGMLRARFSGAG-KLEELDMMFD 769
+L E++A +E+ERNR HARN RARKK+ +E+L+ V ++ +++E +R+ AK+ L R R +GV + E+W K L F L PL P+++ D+ +R++ GV+G D SL+ + ++G R + Y + ++ T S +D + + RTTDAR G E G+ ARF+ +G +L L++++D
Sbjct: 69 SLAPEERARLEKERNREHARNTRARKKEALEKLRREVAGLEEAAVERDESERRARQIAKR-------RLAVLQCVFRKRGEGVLEREEWGKFLTSDFELRQPLNPHQACRPADVEGNRKLSRGVDGFIDDVASLSVLFRSVG---------RSADLSYRVAAAPTFACSVLPPAPTVVNDAVYGHWGARTTDARRHGARGEAGIRGLFCARFAESGCRLRSLELVYD 279
BLAST of mRNA_S-ischiensis_contig10.1636.1 vs. uniprot
Match: A0A7S4I3G7_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I3G7_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 5.850e-13 Identity = 64/187 (34.22%), Postives = 96/187 (51.34%), Query Frame = 2
Query: 26 AFMTDEDVLTALAADPEGPDP---GAGFVEDGAKRQR-------TLTSEQKAVVERERNRLHARNARARKKQYVEELKDRVDQLHAQKEEVQRKRESAAKKMQDEKDAHRETLLLALRMRADGVQDEEQWAKVLMETFRLTLPLTPYRSHAAGDICHDRRVMTGVEGMAADTESLTAMRTALGSRGA 556
A+ +D D +LA P P P A + G K R LT E++A + R+RNR HAR+ R RKK Y+ +LK+ ++ LH +K E ++ R A + + + + R+ + L+ A D +W +L F L P+TPYRS +I + R GVE M AD S++ M +GSR A
Sbjct: 31 AYASDTDTGASLAI-PGHPMPIPDSAPTPKSGGKGGRGKPSQSVNLTPEERAKLNRDRNREHARSTRLRKKAYISQLKEMLENLHNEKNECEKSRRVAMQHLAEVQTVRRDVVRSFLQFHAGYESDPRKWGTILEAGFFLKQPVTPYRSFRRVEIEQECRKSKGVESMIADAASMSVMVEGMGSRSA 216
BLAST of mRNA_S-ischiensis_contig10.1636.1 vs. uniprot
Match: D7G007_ECTSI (BZIP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G007_ECTSI) HSP 1 Score: 80.1 bits (196), Expect = 1.050e-11 Identity = 48/131 (36.64%), Postives = 79/131 (60.31%), Query Frame = 2
Query: 131 LTSEQKAVVERERNRLHARNARARKKQYVEELKDRVDQLHAQKEEVQRKRESAAKKMQDEKDAHRETLLLALRMRADGVQDEEQWAKVLMETFRLTLPLTPYRSHAAGDICHDRRVMTGVEGMAADTESLT 523
L+ E++A R+RNR HARN R RKK +VEELK +V++L + +E + + + A+++ ++ + LL L R ++W VL E F + +P+TPYRS + +RV+ G++G+ ADT SL+
Sbjct: 38 LSKEERAKQNRDRNREHARNTRLRKKAFVEELKKQVEELVSGREREEMDQRAEARRVASLREIRLQVLLTFLEYRGRCELGRKEWQSVLDEQFEMQMPITPYRSFPPQQVQGGKRVIKGLDGVIADTLSLS 168
BLAST of mRNA_S-ischiensis_contig10.1636.1 vs. uniprot
Match: A0A6H5KRD8_9PHAE (BZIP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRD8_9PHAE) HSP 1 Score: 79.7 bits (195), Expect = 2.380e-11 Identity = 48/131 (36.64%), Postives = 78/131 (59.54%), Query Frame = 2
Query: 131 LTSEQKAVVERERNRLHARNARARKKQYVEELKDRVDQLHAQKEEVQRKRESAAKKMQDEKDAHRETLLLALRMRADGVQDEEQWAKVLMETFRLTLPLTPYRSHAAGDICHDRRVMTGVEGMAADTESLT 523
L+ E++A R+RNR HARN R RKK +VEELK +V++L + +E + R + +++ ++ + LL L R ++W VL E F + +P+TPYRS + +RV+ G++G+ ADT SL+
Sbjct: 259 LSKEERAKQNRDRNREHARNTRLRKKAFVEELKKQVEELVSGREREEMDRRAEERRVASLREIRLQVLLTFLEYRGRCELGRKEWQSVLDEQFEMQMPITPYRSFPPQQVQGGKRVIKGLDGVIADTLSLS 389
BLAST of mRNA_S-ischiensis_contig10.1636.1 vs. uniprot
Match: F0YEC2_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEC2_AURAN) HSP 1 Score: 79.0 bits (193), Expect = 6.450e-11 Identity = 79/274 (28.83%), Postives = 115/274 (41.97%), Query Frame = 2
Query: 131 LTSEQKAVVERERNRLHARNARARKKQYVEELKDRVDQLHAQKEEVQRKRESAAKKMQDEKDAHRETLLLAL-RMRADGVQDEEQWAKVLMETFRLTLPLTPYRSHAAGDICHDRRVMTGVEGMAADTESLTAMRTALGSRGA------------------------------------------------VGDDKRLVSVEYALGSSETMFTSSDGLMSTFTMRTTDARACGCTAELEKVGMLRARFSGAG--------KLEELDMMFDAISF 781
L+++++ +ERERNR HARN RARKK+ +E+LK V+ EV+ +R + +++ K E LL + R R + V D E WA L F L P + Y +H D+ +RRV GV GMA D + +G GA V DD+ VS + + + D +M + +RT DA+ G E+ GM ARF G G KL L++ +D SF
Sbjct: 749 LSADERTALERERNREHARNTRARKKEAIEKLKHDVEAW-----EVETRRTEERRAVKERKSERHERLLAEVFRARGEAVVDPEVWASWLAPGFELWQPQSDYVAHRPSDVVRERRVSRGVAGMADDVAAWAVFMHGVGRSGAFSSRMAEPPAYECRHIHADDKVDPSTFGMFGAGGAXXXXXXXXXXXPRVRDDE--VSTDDEDARERRVAYARDTIMGFWALRTLDAQRHGARCEVALRGMYCARFVGGGDATAENPIKLLRLELAYDMQSF 1015
BLAST of mRNA_S-ischiensis_contig10.1636.1 vs. uniprot
Match: B8BRY8_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BRY8_THAPS) HSP 1 Score: 68.6 bits (166), Expect = 7.650e-8 Identity = 75/277 (27.08%), Postives = 129/277 (46.57%), Query Frame = 2
Query: 32 MTDEDVLTALAADPEGPD--PGAGFVEDGAK--RQRTLTSEQKAVVERERNRLHARNARARKKQYVEELKDRVDQLHAQKEEVQRKRESAAKKMQDEKDAHRETLLLALRMRADGVQDEEQWAKVLMETFRLTLPLTPYRSHAAGDICHDRRVMTGVEGMAADTESLTAMRTAL-----GSRGAVGDDKRLVSVEYALGSSETMFTSS-------------------DGLMS--TFTMRTTDARACGCTAELEKVGMLRARFSGAG-KLEELDMMFD 769
+T ++ +TA P+ D A + A+ R+ TL+ E++A R+RNR HARN R RKK YVEELK + ++ +Q++ ++ AA++ +++++ + L++R + +W +L + F TLP TPYR G+ + V D + ++ R+ L GS + D K L + A+G + + S+ DG ++ F T A G +E+ G +R+ FS A KL +D+ FD
Sbjct: 366 LTSQNWVTACNPVPQAADISSNASNCDKAARNARRATLSQEERAKQNRDRNREHARNTRLRKKAYVEELKRTLTEIVSQRDAADVEKRHAAQREREQREVRFRVMEEFLKLRGRNELNVARWVAILEDGFIFTLPKTPYRQMVDGE-------KSPVNSRGGDDANNSSSRSDLEQVLRGSGPVMEDSKYLSNFLQAVGGDSSSYASNASSSQIQIVYRCDRKRFFMDGNITFMDFAATTIGAVNKGLPSEIVFKGSMRSSFSPASNKLISVDITFD 635
BLAST of mRNA_S-ischiensis_contig10.1636.1 vs. uniprot
Match: A0A7S2XX40_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX40_9STRA) HSP 1 Score: 53.5 bits (127), Expect = 7.700e-5 Identity = 29/91 (31.87%), Postives = 55/91 (60.44%), Query Frame = 2
Query: 116 KRQRTLTSEQKAVVERERNRLHARNARARKKQYVEELKDRVDQLHAQKEEVQRKRESAAKKMQDEKDAHRETLLLALRMRADGVQDEEQWA 388
K+ ++Q ++ ++RN+LHARN R RKK Y++ L D +++L +K + +R+ AA K++ + + ++TL R+ V D ++WA
Sbjct: 17 KQSECKVAQQSSLTSQDRNKLHARNTRLRKKAYIQSLVDAIEKLSEEKSKAAAERKQAASKLECQNNLRKQTLETFFYYRSKFVTDSDKWA 107 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig10.1636.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig10.1636.1 >prot_S-ischiensis_contig10.1636.1 ID=prot_S-ischiensis_contig10.1636.1|Name=mRNA_S-ischiensis_contig10.1636.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=322bp MAFMTDEDVLTALAADPEGPDPGAGFVEDGAKRQRTLTSEQKAVVERERNback to top mRNA from alignment at S-ischiensis_contig10:3317795..3327689+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig10.1636.1 ID=mRNA_S-ischiensis_contig10.1636.1|Name=mRNA_S-ischiensis_contig10.1636.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=9895bp|location=Sequence derived from alignment at S-ischiensis_contig10:3317795..3327689+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig10:3317795..3327689+ >mRNA_S-ischiensis_contig10.1636.1 ID=mRNA_S-ischiensis_contig10.1636.1|Name=mRNA_S-ischiensis_contig10.1636.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1932bp|location=Sequence derived from alignment at S-ischiensis_contig10:3317795..3327689+ (Schizocladia ischiensis KU_0333)back to top |