mRNA_S-ischiensis_contig10.1617.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig10.1617.1 vs. uniprot
Match: A0A836CLJ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLJ1_9STRA) HSP 1 Score: 303 bits (775), Expect = 2.250e-95 Identity = 157/297 (52.86%), Postives = 195/297 (65.66%), Query Frame = 3
Query: 198 PGFYPHRSQWRRWVQCE---PTAGMDA-------PCARSGHALCVVGSTVYVFGGCAKHRDGADGCLDDLFSFDLATLQWERIALGEGALRPKARRSASMVALEDGRLLLSGGAGNDPDNVRPDMWVFCPRRRQWSVLLSGSAAAPFRQCGQSVCADGRGRLLFFGGSTGLSYNNDLVEYCLRTNRSQRLATSGCGKPTPRYKHQAFVLGDAMYVIGGGSFKPPCAGIDVYRLDLATLEWTAIPTKGIVPPARTAHTCAVDR-EGRAVYMYGGFSADLQCLDTLCRLDLDDMMWSIV 1055
P P + RW+ C+ T G D P RSGH +C+VG Y+FGGC + D CL+DL SFD+ TL+WER+ GA +P RRSA+M AL+DGR LLSGGAG+DPD++R D+++F R W+ LL G A PF CGQS C + +LFFGGSTGL Y+N L +Y L+TNR Q+LAT G +PTPRYKHQAF+ G +MYVIGGG FKP C IDV+RLDL T+ W + T+G VP AR AHTCA D EG AVYM+GGF+A LQCL RL LD W+ +
Sbjct: 42 PQTIPRFASHTRWLYCQGPTSTCGADGEKALSTPPSPRSGHTVCLVGGKAYLFGGCGRSAGVEDKCLNDLHSFDVETLRWERVET-RGAEQPAVRRSAAMCALDDGRFLLSGGAGDDPDHLRSDLYLFVTHTRVWTKLLEGPEAKPFCLCGQSACL-WQDTILFFGGSTGLEYSNALHQYNLKTNRWQQLATLG-PRPTPRYKHQAFIHGSSMYVIGGGCFKPLCEDIDVHRLDLTTMTWRQVATRGSVPMARVAHTCAYDSSEGGAVYMWGGFTAGLQCLRNFYRLSLDTHTWTAI 335
BLAST of mRNA_S-ischiensis_contig10.1617.1 vs. uniprot
Match: A0A836CMQ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMQ1_9STRA) HSP 1 Score: 256 bits (655), Expect = 1.310e-78 Identity = 125/213 (58.69%), Postives = 155/213 (72.77%), Query Frame = 3
Query: 426 EGALRPKARRSASMVALEDGRLLLSGGAGNDPDNVRPDMWVFCPRRRQWSVLLSGSAAAPFRQCGQSVCADGRGRLLFFGGSTGLSYNNDLVEYCLRTNRSQRLATSGCGKPTPRYKHQAFVLGDAMYVIGGGSFKPPCAGIDVYRLDLATLEWTAIPTKGIVPPARTAHTCAVDR-EGRAVYMYGGFSADLQCLDTLCRLDLDDMMWSIVAP 1061
+G +RP RRSA+M A+ DGR LLSGGAG+DPD++R D+++F R R W++LL G A PF CGQS C RG +LFFGGSTGL Y+N+L Y LRTNR Q+LAT G +PTPRYKHQAF+ D MYV+GGG FKP C DV++LDL T+EWT + TKG VP AR AHTCA D +G AVYM+GGF+A LQCL +L LD W+ ++P
Sbjct: 18 KGTVRPAVRRSAAMCAVGDGRFLLSGGAGDDPDHLRSDLYMFDTRTRTWTMLLEGDDAKPFCLCGQSACC-WRGTVLFFGGSTGLEYSNELFSYDLRTNRWQQLATKG-PRPTPRYKHQAFIHNDCMYVVGGGCFKPLCEDTDVHKLDLLTMEWTTVATKGAVPMARVAHTCAYDSTDGGAVYMWGGFTAGLQCLRNFYKLALDTHTWTSISP 228
BLAST of mRNA_S-ischiensis_contig10.1617.1 vs. uniprot
Match: A0A836CQE2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQE2_9STRA) HSP 1 Score: 226 bits (575), Expect = 8.190e-67 Identity = 130/294 (44.22%), Postives = 176/294 (59.86%), Query Frame = 3
Query: 210 PHRSQWRRWVQCEPTAGMDAPCARSGHALCVVGSTVYVFGGCAKHRDGADGCLDDLFSFDLATLQWERIALGEGALRPKARRSASMVALEDGR-LLLSGGAGNDPDNVRPDMWVFCPRRRQWSVLLSGSAAAPFRQCGQSVCADGRGRLLFFGGSTGLSYNNDLVEYCLRTNRSQRLATSGCGKPTPRYKHQAFVLGDAMYVIGGGSFKPPCAGIDVYRLDLATLEWTAIPTKGIVPPARTAHTCAVDREGRAVYMYGGFSADLQCLDTLCRLDLDDMMWSIV----APAAAVS 1076
P R + ++WV+ + + + +P RSGH + VVGS VY+FGGC D A CL+D+++FDL + +WE + +G P AR S M A ++++GG G + D++R D+ F R + WS + AP R GQ+VC G LL FGGSTGL Y NDL EY + TN ++LAT+G +P+PRYKHQA V+GDAMYVIGGG FKP A ID+YRLDL TL W G VP AR AH+C+ D +Y++GGF+ +L L D W+ + A AAA S
Sbjct: 22 PRRQEHQQWVKLQTSGTVPSP--RSGHDVAVVGSKVYLFGGCGGEND-AINCLNDMYTFDLDSHRWETVT-AKGDSVPSARASFGMCAGPAANTIIVAGGTGVEMDSLRSDVLEFDTRTKLWSKITGDGEDAPSRFYGQTVCRYGS-VLLLFGGSTGLHYTNDLFEYNMTTNCWRKLATTG-KRPSPRYKHQAVVVGDAMYVIGGGCFKPEQAAIDLYRLDLRTLVWDTPAMGGEVPRARVAHSCSFDPATSTIYLWGGFTGELSRLQDFFAYDTARAEWAEIKTPPADAAAPS 309
BLAST of mRNA_S-ischiensis_contig10.1617.1 vs. uniprot
Match: A0A836CEB6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEB6_9STRA) HSP 1 Score: 219 bits (558), Expect = 3.150e-64 Identity = 117/279 (41.94%), Postives = 161/279 (57.71%), Query Frame = 3
Query: 231 RWVQCEPTAGMDAPCARSGHALCVVGSTVYVFGGCAKHRDGADGCLDDLFSFDLATLQWERIALGEGALRPKARRSASMVALEDGRLLLSGGAGNDPDNVRPDMWVFCPRRRQWSVLLSGSAAAPFRQCGQSVCADGRGRLLFFGGSTGLSYNNDLVEYCLRTNRSQRLATSGCGKPTPRYKHQAFVLGDAMYVIGGGSFKPPCAGIDVYRLDLATLEWTAIPTKGIVPPARTAHTCAVDREGRAVYMYGGFSADLQCLDTLCRLDLDDMMWSIVAPAA 1067
RWV C T+G P RSGH + V+G Y+FGGC + CL+D+++FDL T QW +A+ P+A ++++GG G + D++R D+ F R R W +++ S P R GQS+C G LL FGGSTG+ Y NDL EY T R ++L T+G KPTPRYKHQA ++G +MYVIGGG FKP + IDV+RLDLATL W + T G VP +R AH+C D ++++GGF+++L L L + W A A
Sbjct: 19 RWV-CLQTSG-QGPSPRSGHDVVVIGRKAYLFGGCGGESNDQIACLNDVYTFDLDTHQWNAVAVNGEPPLPRASFGMCARPSPHRSIVVAGGTGVEMDSLRADIVEFDTRTRAWRRVVTDSEETPCRFYGQSLCTYGES-LLLFGGSTGMHYTNDLYEYNTTTQRWRKLTTTG-RKPTPRYKHQAVIVGASMYVIGGGCFKPEQSTIDVHRLDLATLAWDEVATSGDVPKSRVAHSCCYDAGTGTIFLWGGFTSELSRLQDFYTLHCETATWRAAAALA 293
BLAST of mRNA_S-ischiensis_contig10.1617.1 vs. uniprot
Match: D7FP90_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP90_ECTSI) HSP 1 Score: 210 bits (535), Expect = 7.340e-61 Identity = 119/277 (42.96%), Postives = 163/277 (58.84%), Query Frame = 3
Query: 264 DAPCARSGHALCVVGSTVYVFGGCAKHRDGADGCLDDLFSFDLATLQWERIALGEGALRPKARRSASMVA-LEDGRLLLSGGAGNDPDNVRPDMWVFCPRRRQWSVLLSGSAAAPFRQCGQSVCADGRGRLLFFGGSTGLSYNNDLVEYCLRTNRSQRLATSGCGKPTPRYKHQAFVLGDAMYVIGGGSFKPPCAGIDVYRLDLATLEWTAIPTKGIVPPARTAHTCAVDREGRAVYMYGGFSADLQCLDTLCRLDLDDMMWSIVA--PAAAVSGGG 1085
D+P RSGH + V+G Y+FGGC +D CL+D++ F+L +W ++ + A P+A S M A G L+++GG G + D++R D+ + R W+ +L+ S P + GQSVC G LL FGGSTGL Y NDL EY +RTN+ +RL TSG P+PRYKHQA V+G MYVIGGG FKP +GID+Y LDL +L W KG +P AR AH+C+ D E +Y++GGF+++L L W +A P A GG
Sbjct: 45 DSPSPRSGHDVVVIGHKAYLFGGCGGEQDQIT-CLNDVYVFNLELHRWSKVTVKGDAPLPRA--SFGMCAGPAPGTLIVAGGTGVEMDSLRADVVEYNVPNRTWTQILTDSEETPCKFYGQSVCTYGD-NLLLFGGSTGLHYTNDLFEYNVRTNKWKRLVTSG-RMPSPRYKHQAVVVGHKMYVIGGGCFKPEQSGIDLYCLDLRSLVWEETTMKGELPKARVAHSCSFDAETDTIYLWGGFTSELSRLQDFFGFHCPTATWVRMAEEPTQAPVAGG 316
BLAST of mRNA_S-ischiensis_contig10.1617.1 vs. uniprot
Match: A0A835ZFC9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFC9_9STRA) HSP 1 Score: 207 bits (528), Expect = 1.030e-59 Identity = 121/284 (42.61%), Postives = 166/284 (58.45%), Query Frame = 3
Query: 216 RSQWRRWVQCEPTAGMDAPCARSGHALCVVGSTVYVFGGCAKHRDGADGCLDDLFSFDLATLQWERIALGEGALRPKARRSASMVALEDGR-LLLSGGAGNDPDNVRPDMWVFCPRRRQWSVLLSGSAAAPFRQCGQSVCADGRGRLLFFGGSTGLSYNNDLVEYCLRTNRSQRLATSGCGKPTPRYKHQAFVLGDAMYVIGGGSFKPPCAGIDVYRLDLATLEWTAIPTKGIVPPARTAHTCAVDREGRAVYMYGGFSADLQCLDTLCRLDLDDMMWSIVAPA 1064
R + RWV+ + + +P RSGH + VVG+ +Y+FGGC D A CL+D+++FDL WE I G P AR S +M + D + L+++GG G + D++R D+ F R R+W L AP + GQ+VC G LL FGGSTGL Y NDL EY + TN ++L T G +P+PRYKHQA V+GD MYVIGGG FKP + ID+Y L+L TL W + G VP AR AH+C+ D E +Y++GGF+ +L L W+ + A
Sbjct: 29 RQEHNRWVKLQVCGTVPSP--RSGHDVAVVGNKLYLFGGCGGEND-AINCLNDMYTFDLDRHVWELIP-HRGEEMPTARASFAMCSGPDEKTLIVAGGTGVEMDSLRSDILQFDTRTRRWIKLHRDGDDAPSKFYGQTVCRYGD-VLLLFGGSTGLHYTNDLFEYNVVTNCWRKLVTQG-RRPSPRYKHQAVVVGDFMYVIGGGCFKPEQSAIDMYCLNLRTLVWAQPRSAGAVPRARVAHSCSFDPETCTIYLWGGFTGELSRLQDFYAYHAPTGEWTEIRTA 306
BLAST of mRNA_S-ischiensis_contig10.1617.1 vs. uniprot
Match: D7FP81_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP81_ECTSI) HSP 1 Score: 204 bits (519), Expect = 1.260e-58 Identity = 117/262 (44.66%), Postives = 161/262 (61.45%), Query Frame = 3
Query: 231 RWVQCEPTAGMDAPCARSGHALCVVGSTVYVFGGCAKHRDGADGCLDDLFSFDLATLQWERIALGEGALRPKARRSASMV-ALEDGRLLLSGGAGNDPDNVRPDMWVFCPRRRQWSVLLSGSAAAPFRQCGQSVCADGRGRLLFFGGSTGLSYNNDLVEYCLRTNRSQRLATSGCGKPTPRYKHQAFVLGDAMYVIGGGSFKPPCAGIDVYRLDLATLEWTAIPT--KGIVPPARTAHTCAVDREGRAVYMYGGFSADLQCL 1007
RWV+ + T+G P RSGH + V+G+ Y+FGGC D CL+D++ FDL +WER ++ AR S M G ++++GG G + D++R D+ + R R W+ +L+ S P + GQSVC G LL FGGSTGL Y+NDL EY + +NR ++L T+G KP+PRYKHQA +GD MYVIGGG FKP + ID+Y LDL TL W T KG +P AR AH+C+ D G +Y++GGF+ +L L
Sbjct: 31 RWVRLQ-TSGRP-PSPRSGHDVAVIGNKAYLFGGCGGDEDQIT-CLNDMYVFDLQLHRWERAVPKGDSIH--ARASFGMCQGPTPGTVIVAGGTGVEMDSLRADVVEYNTRTRTWTSVLTDSEETPCKFYGQSVCTYGD-NLLLFGGSTGLHYSNDLFEYNVCSNRWRKLTTTG-RKPSPRYKHQAVAVGDKMYVIGGGCFKPEQSSIDLYCLDLKTLVWEMDETEMKGDLPKARVAHSCSFDPVGGDIYLWGGFTGELSRL 285
BLAST of mRNA_S-ischiensis_contig10.1617.1 vs. uniprot
Match: A0A7S3ULU8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3ULU8_HETAK) HSP 1 Score: 183 bits (465), Expect = 4.560e-52 Identity = 103/269 (38.29%), Postives = 151/269 (56.13%), Query Frame = 3
Query: 234 WVQCEPTAGMDAPCARSGHALCVVGSTVYVFGGCAKHRDGADGCLDDLFSFDLATLQWERIALGEGALRPKARRSASMVALEDGRLLLSGGAGNDPDNVRPDMWVFCPRRRQWSVLLS-GSAAAPFRQCGQSVCADGRGRLLFFGGSTGLSYNNDLVEYCLRTNR-SQRLATSGCGKPTPRYKHQAFVLGDAMYVIGGGSFKPPCAGIDVYRLDLATLEWTAIPTKGIVPPARTAHTCAVDREGRAVYMYGGFSADLQCLDTLCRLDLD 1034
W Q T M P RSGH++ + V++FGGC +G C+ D F+L+TL W ++ P+A L D L+++GG G++ + DM + R R+W L++ + R GQ+ C G L+ FGGS+G Y + L + L T R + +AT+G +P+ RYKHQA V+GD +YV+GGG++KP +D++RLDL W + G PPAR AHTCA D RA+Y++GGF A+L+ L+ RLDLD
Sbjct: 2 WQQVVFTGSM--PGERSGHSVLAMNGQVFLFGGCGG-SEGNTPCMSDFICFNLSTLTWSKVQAEGTTPSPRASFEMCRGCLPD-TLIIAGGTGSE--GICGDMHEYNARTRRWRQLVARDDPGSRCRYYGQTACPWGDRTLVLFGGSSGHEYTDHLYTFDLETLRFAGPVATTG-DRPSARYKHQAVVVGDELYVLGGGAYKPTAPQLDIFRLDLTRWHWERVAAAGAAPPARVAHTCAYDPRSRALYLWGGFDAELERLNDFYRLDLD 263
BLAST of mRNA_S-ischiensis_contig10.1617.1 vs. uniprot
Match: A0A6H5JG58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG58_9PHAE) HSP 1 Score: 192 bits (489), Expect = 1.520e-51 Identity = 121/297 (40.74%), Postives = 152/297 (51.18%), Query Frame = 3
Query: 270 PCARSGHALCVVGSTVYVFGGCAKHRDGADG----------------CLDDLFSFDLATLQWERIALGEGAL-------RPKARRSASMVALE----DGRLLLSGGAGNDPDNVRPDMWVFCPRRRQWSVLLSGSAAAPF---------RQCGQSVCADG-RGRLLFFGGSTGLSYNNDLVEYCLRTNRSQRLATSGCGKPTPRYKHQAFVLGDAMYVIGGGSFKPPCAGIDVYRLDL------ATLEWTAIPTKGIVPPARTAHTCAVDREGRAVYMYGGFSADLQCLDTLCRLDL 1031
P ARSGH V +YVFGGC + CL DL +DLA +W + A RP R A+M A E + RL LSGGAG+DP ++R W FC RRR W +L G +AAP R+ G ++ D R RL+ FGGSTG Y ND + L T LAT+G +P+PRYKHQAF+ D MYV+GGGSF+P +DVYRL L A LEW + G P R AH A DR GRA Y++GGF++ ++ T C L L
Sbjct: 17 PTARSGHCATVARDALYVFGGCGHPTAASSASAASVDAQLPAEALPICLGDLHVYDLARQRWSEVRPPTRAADSASEEPRPAERTCAAMCASEGEDAEDRLFLSGGAGDDPYDLRGCCWEFCVRRRAWRLLYEGGSAAPSAAPETMSPCRRIGHTMVHDSTRNRLVIFGGSTGHEYFNDTQAFDLATGTWTALATTG-ERPSPRYKHQAFLDADFMYVVGGGSFEPEGPDLDVYRLPLTAGGGKALLEWERVRPTGTPPRCRAAHGLAWDRVGRAAYIWGGFTSGMELDSTFCALRL 312
BLAST of mRNA_S-ischiensis_contig10.1617.1 vs. uniprot
Match: A0A7S2UXB8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXB8_9STRA) HSP 1 Score: 174 bits (442), Expect = 2.650e-47 Identity = 108/302 (35.76%), Postives = 162/302 (53.64%), Query Frame = 3
Query: 159 ILPTSQPRRCCRPPGFYPHRS-QWRRWVQCEPTAGMDAPCARSGHALCVVGSTVYVFGGCAKHRDGADGCLDDLFSFDLATLQWERIALGEGALRPKARRSASMVALEDGRLLLSGGAGNDPDNVR-PDMWVFCPRRRQWSVLLSGSAAAPFRQC-GQSVCADGRGRLLFFGGSTGLSYNNDLVEYCLRTNRSQRLATSGCGKPTPRYKHQAFVLGDAMYVIGGGSFKPPCAGIDVYRLDLATLEWTAIPTKGIVPPARTAHTCAVDREGRAVYMYGGFSADLQCLDTLCRLDLDDMMWSIV 1055
I+PT+ P RC P + H QW+ GM P RSGH + + Y+FGGC + + D + + DL T++ I + RP+A + L DG ++++GGAG P+ V D+ F +W L + PF +C GQSV A + L+FFGG+TG Y+ND+ ++ RT L T+G +P+PRYK + ++G M++IGGG+F+P +D++ LDL TL+WT + T G +P R AHTCA D +Y++GG S L LD+ M+WS+V
Sbjct: 26 IVPTNLPERCT--PKLHSHDVFQWQ-------LTGMGVP--RSGHGVSIHSGKAYIFGGCEGVQRNVEHITDSMMAVDLETMECRDIHVTGVKPRPRASFAICEGPL-DGTIIVAGGAG--PNRVLYSDILEFHVGSNKWRTLAT-EGTTPFCKCYGQSVRAY-KSSLIFFGGTTGERYSNDVYQFDTRTGHWICLETTG-NQPSPRYKQEMVIIGSKMFIIGGGNFRPKSTSMDMFCLDLKTLKWTEVQTYGKIPSGRVAHTCAYDERDHKLYLWGGISIKRDQLAECFVLDMKSMIWSVV 310 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig10.1617.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig10.1617.1 >prot_S-ischiensis_contig10.1617.1 ID=prot_S-ischiensis_contig10.1617.1|Name=mRNA_S-ischiensis_contig10.1617.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=353bp MVLLLCEAGRRLKDLMGQGHALMKRRENGECILPTSQPRRCCRPPGFYPHback to top mRNA from alignment at S-ischiensis_contig10:3153257..3154604- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig10.1617.1 ID=mRNA_S-ischiensis_contig10.1617.1|Name=mRNA_S-ischiensis_contig10.1617.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1348bp|location=Sequence derived from alignment at S-ischiensis_contig10:3153257..3154604- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig10:3153257..3154604- >mRNA_S-ischiensis_contig10.1617.1 ID=mRNA_S-ischiensis_contig10.1617.1|Name=mRNA_S-ischiensis_contig10.1617.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2118bp|location=Sequence derived from alignment at S-ischiensis_contig10:3153257..3154604- (Schizocladia ischiensis KU_0333)back to top |