mRNA_S-ischiensis_contig10.1617.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig10.1617.1
Unique NamemRNA_S-ischiensis_contig10.1617.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig10.1617.1 vs. uniprot
Match: A0A836CLJ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLJ1_9STRA)

HSP 1 Score: 303 bits (775), Expect = 2.250e-95
Identity = 157/297 (52.86%), Postives = 195/297 (65.66%), Query Frame = 3
Query:  198 PGFYPHRSQWRRWVQCE---PTAGMDA-------PCARSGHALCVVGSTVYVFGGCAKHRDGADGCLDDLFSFDLATLQWERIALGEGALRPKARRSASMVALEDGRLLLSGGAGNDPDNVRPDMWVFCPRRRQWSVLLSGSAAAPFRQCGQSVCADGRGRLLFFGGSTGLSYNNDLVEYCLRTNRSQRLATSGCGKPTPRYKHQAFVLGDAMYVIGGGSFKPPCAGIDVYRLDLATLEWTAIPTKGIVPPARTAHTCAVDR-EGRAVYMYGGFSADLQCLDTLCRLDLDDMMWSIV 1055
            P   P  +   RW+ C+    T G D        P  RSGH +C+VG   Y+FGGC +     D CL+DL SFD+ TL+WER+    GA +P  RRSA+M AL+DGR LLSGGAG+DPD++R D+++F    R W+ LL G  A PF  CGQS C   +  +LFFGGSTGL Y+N L +Y L+TNR Q+LAT G  +PTPRYKHQAF+ G +MYVIGGG FKP C  IDV+RLDL T+ W  + T+G VP AR AHTCA D  EG AVYM+GGF+A LQCL    RL LD   W+ +
Sbjct:   42 PQTIPRFASHTRWLYCQGPTSTCGADGEKALSTPPSPRSGHTVCLVGGKAYLFGGCGRSAGVEDKCLNDLHSFDVETLRWERVET-RGAEQPAVRRSAAMCALDDGRFLLSGGAGDDPDHLRSDLYLFVTHTRVWTKLLEGPEAKPFCLCGQSACL-WQDTILFFGGSTGLEYSNALHQYNLKTNRWQQLATLG-PRPTPRYKHQAFIHGSSMYVIGGGCFKPLCEDIDVHRLDLTTMTWRQVATRGSVPMARVAHTCAYDSSEGGAVYMWGGFTAGLQCLRNFYRLSLDTHTWTAI 335          
BLAST of mRNA_S-ischiensis_contig10.1617.1 vs. uniprot
Match: A0A836CMQ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMQ1_9STRA)

HSP 1 Score: 256 bits (655), Expect = 1.310e-78
Identity = 125/213 (58.69%), Postives = 155/213 (72.77%), Query Frame = 3
Query:  426 EGALRPKARRSASMVALEDGRLLLSGGAGNDPDNVRPDMWVFCPRRRQWSVLLSGSAAAPFRQCGQSVCADGRGRLLFFGGSTGLSYNNDLVEYCLRTNRSQRLATSGCGKPTPRYKHQAFVLGDAMYVIGGGSFKPPCAGIDVYRLDLATLEWTAIPTKGIVPPARTAHTCAVDR-EGRAVYMYGGFSADLQCLDTLCRLDLDDMMWSIVAP 1061
            +G +RP  RRSA+M A+ DGR LLSGGAG+DPD++R D+++F  R R W++LL G  A PF  CGQS C   RG +LFFGGSTGL Y+N+L  Y LRTNR Q+LAT G  +PTPRYKHQAF+  D MYV+GGG FKP C   DV++LDL T+EWT + TKG VP AR AHTCA D  +G AVYM+GGF+A LQCL    +L LD   W+ ++P
Sbjct:   18 KGTVRPAVRRSAAMCAVGDGRFLLSGGAGDDPDHLRSDLYMFDTRTRTWTMLLEGDDAKPFCLCGQSACC-WRGTVLFFGGSTGLEYSNELFSYDLRTNRWQQLATKG-PRPTPRYKHQAFIHNDCMYVVGGGCFKPLCEDTDVHKLDLLTMEWTTVATKGAVPMARVAHTCAYDSTDGGAVYMWGGFTAGLQCLRNFYKLALDTHTWTSISP 228          
BLAST of mRNA_S-ischiensis_contig10.1617.1 vs. uniprot
Match: A0A836CQE2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQE2_9STRA)

HSP 1 Score: 226 bits (575), Expect = 8.190e-67
Identity = 130/294 (44.22%), Postives = 176/294 (59.86%), Query Frame = 3
Query:  210 PHRSQWRRWVQCEPTAGMDAPCARSGHALCVVGSTVYVFGGCAKHRDGADGCLDDLFSFDLATLQWERIALGEGALRPKARRSASMVALEDGR-LLLSGGAGNDPDNVRPDMWVFCPRRRQWSVLLSGSAAAPFRQCGQSVCADGRGRLLFFGGSTGLSYNNDLVEYCLRTNRSQRLATSGCGKPTPRYKHQAFVLGDAMYVIGGGSFKPPCAGIDVYRLDLATLEWTAIPTKGIVPPARTAHTCAVDREGRAVYMYGGFSADLQCLDTLCRLDLDDMMWSIV----APAAAVS 1076
            P R + ++WV+ + +  + +P  RSGH + VVGS VY+FGGC    D A  CL+D+++FDL + +WE +   +G   P AR S  M A      ++++GG G + D++R D+  F  R + WS +      AP R  GQ+VC  G   LL FGGSTGL Y NDL EY + TN  ++LAT+G  +P+PRYKHQA V+GDAMYVIGGG FKP  A ID+YRLDL TL W      G VP AR AH+C+ D     +Y++GGF+ +L  L      D     W+ +    A AAA S
Sbjct:   22 PRRQEHQQWVKLQTSGTVPSP--RSGHDVAVVGSKVYLFGGCGGEND-AINCLNDMYTFDLDSHRWETVT-AKGDSVPSARASFGMCAGPAANTIIVAGGTGVEMDSLRSDVLEFDTRTKLWSKITGDGEDAPSRFYGQTVCRYGS-VLLLFGGSTGLHYTNDLFEYNMTTNCWRKLATTG-KRPSPRYKHQAVVVGDAMYVIGGGCFKPEQAAIDLYRLDLRTLVWDTPAMGGEVPRARVAHSCSFDPATSTIYLWGGFTGELSRLQDFFAYDTARAEWAEIKTPPADAAAPS 309          
BLAST of mRNA_S-ischiensis_contig10.1617.1 vs. uniprot
Match: A0A836CEB6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEB6_9STRA)

HSP 1 Score: 219 bits (558), Expect = 3.150e-64
Identity = 117/279 (41.94%), Postives = 161/279 (57.71%), Query Frame = 3
Query:  231 RWVQCEPTAGMDAPCARSGHALCVVGSTVYVFGGCAKHRDGADGCLDDLFSFDLATLQWERIALGEGALRPKARRSASMVALEDGRLLLSGGAGNDPDNVRPDMWVFCPRRRQWSVLLSGSAAAPFRQCGQSVCADGRGRLLFFGGSTGLSYNNDLVEYCLRTNRSQRLATSGCGKPTPRYKHQAFVLGDAMYVIGGGSFKPPCAGIDVYRLDLATLEWTAIPTKGIVPPARTAHTCAVDREGRAVYMYGGFSADLQCLDTLCRLDLDDMMWSIVAPAA 1067
            RWV C  T+G   P  RSGH + V+G   Y+FGGC    +    CL+D+++FDL T QW  +A+      P+A             ++++GG G + D++R D+  F  R R W  +++ S   P R  GQS+C  G   LL FGGSTG+ Y NDL EY   T R ++L T+G  KPTPRYKHQA ++G +MYVIGGG FKP  + IDV+RLDLATL W  + T G VP +R AH+C  D     ++++GGF+++L  L     L  +   W   A  A
Sbjct:   19 RWV-CLQTSG-QGPSPRSGHDVVVIGRKAYLFGGCGGESNDQIACLNDVYTFDLDTHQWNAVAVNGEPPLPRASFGMCARPSPHRSIVVAGGTGVEMDSLRADIVEFDTRTRAWRRVVTDSEETPCRFYGQSLCTYGES-LLLFGGSTGMHYTNDLYEYNTTTQRWRKLTTTG-RKPTPRYKHQAVIVGASMYVIGGGCFKPEQSTIDVHRLDLATLAWDEVATSGDVPKSRVAHSCCYDAGTGTIFLWGGFTSELSRLQDFYTLHCETATWRAAAALA 293          
BLAST of mRNA_S-ischiensis_contig10.1617.1 vs. uniprot
Match: D7FP90_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP90_ECTSI)

HSP 1 Score: 210 bits (535), Expect = 7.340e-61
Identity = 119/277 (42.96%), Postives = 163/277 (58.84%), Query Frame = 3
Query:  264 DAPCARSGHALCVVGSTVYVFGGCAKHRDGADGCLDDLFSFDLATLQWERIALGEGALRPKARRSASMVA-LEDGRLLLSGGAGNDPDNVRPDMWVFCPRRRQWSVLLSGSAAAPFRQCGQSVCADGRGRLLFFGGSTGLSYNNDLVEYCLRTNRSQRLATSGCGKPTPRYKHQAFVLGDAMYVIGGGSFKPPCAGIDVYRLDLATLEWTAIPTKGIVPPARTAHTCAVDREGRAVYMYGGFSADLQCLDTLCRLDLDDMMWSIVA--PAAAVSGGG 1085
            D+P  RSGH + V+G   Y+FGGC   +D    CL+D++ F+L   +W ++ +   A  P+A  S  M A    G L+++GG G + D++R D+  +    R W+ +L+ S   P +  GQSVC  G   LL FGGSTGL Y NDL EY +RTN+ +RL TSG   P+PRYKHQA V+G  MYVIGGG FKP  +GID+Y LDL +L W     KG +P AR AH+C+ D E   +Y++GGF+++L  L            W  +A  P  A   GG
Sbjct:   45 DSPSPRSGHDVVVIGHKAYLFGGCGGEQDQIT-CLNDVYVFNLELHRWSKVTVKGDAPLPRA--SFGMCAGPAPGTLIVAGGTGVEMDSLRADVVEYNVPNRTWTQILTDSEETPCKFYGQSVCTYGD-NLLLFGGSTGLHYTNDLFEYNVRTNKWKRLVTSG-RMPSPRYKHQAVVVGHKMYVIGGGCFKPEQSGIDLYCLDLRSLVWEETTMKGELPKARVAHSCSFDAETDTIYLWGGFTSELSRLQDFFGFHCPTATWVRMAEEPTQAPVAGG 316          
BLAST of mRNA_S-ischiensis_contig10.1617.1 vs. uniprot
Match: A0A835ZFC9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFC9_9STRA)

HSP 1 Score: 207 bits (528), Expect = 1.030e-59
Identity = 121/284 (42.61%), Postives = 166/284 (58.45%), Query Frame = 3
Query:  216 RSQWRRWVQCEPTAGMDAPCARSGHALCVVGSTVYVFGGCAKHRDGADGCLDDLFSFDLATLQWERIALGEGALRPKARRSASMVALEDGR-LLLSGGAGNDPDNVRPDMWVFCPRRRQWSVLLSGSAAAPFRQCGQSVCADGRGRLLFFGGSTGLSYNNDLVEYCLRTNRSQRLATSGCGKPTPRYKHQAFVLGDAMYVIGGGSFKPPCAGIDVYRLDLATLEWTAIPTKGIVPPARTAHTCAVDREGRAVYMYGGFSADLQCLDTLCRLDLDDMMWSIVAPA 1064
            R +  RWV+ +    + +P  RSGH + VVG+ +Y+FGGC    D A  CL+D+++FDL    WE I    G   P AR S +M +  D + L+++GG G + D++R D+  F  R R+W  L      AP +  GQ+VC  G   LL FGGSTGL Y NDL EY + TN  ++L T G  +P+PRYKHQA V+GD MYVIGGG FKP  + ID+Y L+L TL W    + G VP AR AH+C+ D E   +Y++GGF+ +L  L            W+ +  A
Sbjct:   29 RQEHNRWVKLQVCGTVPSP--RSGHDVAVVGNKLYLFGGCGGEND-AINCLNDMYTFDLDRHVWELIP-HRGEEMPTARASFAMCSGPDEKTLIVAGGTGVEMDSLRSDILQFDTRTRRWIKLHRDGDDAPSKFYGQTVCRYGD-VLLLFGGSTGLHYTNDLFEYNVVTNCWRKLVTQG-RRPSPRYKHQAVVVGDFMYVIGGGCFKPEQSAIDMYCLNLRTLVWAQPRSAGAVPRARVAHSCSFDPETCTIYLWGGFTGELSRLQDFYAYHAPTGEWTEIRTA 306          
BLAST of mRNA_S-ischiensis_contig10.1617.1 vs. uniprot
Match: D7FP81_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP81_ECTSI)

HSP 1 Score: 204 bits (519), Expect = 1.260e-58
Identity = 117/262 (44.66%), Postives = 161/262 (61.45%), Query Frame = 3
Query:  231 RWVQCEPTAGMDAPCARSGHALCVVGSTVYVFGGCAKHRDGADGCLDDLFSFDLATLQWERIALGEGALRPKARRSASMV-ALEDGRLLLSGGAGNDPDNVRPDMWVFCPRRRQWSVLLSGSAAAPFRQCGQSVCADGRGRLLFFGGSTGLSYNNDLVEYCLRTNRSQRLATSGCGKPTPRYKHQAFVLGDAMYVIGGGSFKPPCAGIDVYRLDLATLEWTAIPT--KGIVPPARTAHTCAVDREGRAVYMYGGFSADLQCL 1007
            RWV+ + T+G   P  RSGH + V+G+  Y+FGGC    D    CL+D++ FDL   +WER      ++   AR S  M      G ++++GG G + D++R D+  +  R R W+ +L+ S   P +  GQSVC  G   LL FGGSTGL Y+NDL EY + +NR ++L T+G  KP+PRYKHQA  +GD MYVIGGG FKP  + ID+Y LDL TL W    T  KG +P AR AH+C+ D  G  +Y++GGF+ +L  L
Sbjct:   31 RWVRLQ-TSGRP-PSPRSGHDVAVIGNKAYLFGGCGGDEDQIT-CLNDMYVFDLQLHRWERAVPKGDSIH--ARASFGMCQGPTPGTVIVAGGTGVEMDSLRADVVEYNTRTRTWTSVLTDSEETPCKFYGQSVCTYGD-NLLLFGGSTGLHYSNDLFEYNVCSNRWRKLTTTG-RKPSPRYKHQAVAVGDKMYVIGGGCFKPEQSSIDLYCLDLKTLVWEMDETEMKGDLPKARVAHSCSFDPVGGDIYLWGGFTGELSRL 285          
BLAST of mRNA_S-ischiensis_contig10.1617.1 vs. uniprot
Match: A0A7S3ULU8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3ULU8_HETAK)

HSP 1 Score: 183 bits (465), Expect = 4.560e-52
Identity = 103/269 (38.29%), Postives = 151/269 (56.13%), Query Frame = 3
Query:  234 WVQCEPTAGMDAPCARSGHALCVVGSTVYVFGGCAKHRDGADGCLDDLFSFDLATLQWERIALGEGALRPKARRSASMVALEDGRLLLSGGAGNDPDNVRPDMWVFCPRRRQWSVLLS-GSAAAPFRQCGQSVCADGRGRLLFFGGSTGLSYNNDLVEYCLRTNR-SQRLATSGCGKPTPRYKHQAFVLGDAMYVIGGGSFKPPCAGIDVYRLDLATLEWTAIPTKGIVPPARTAHTCAVDREGRAVYMYGGFSADLQCLDTLCRLDLD 1034
            W Q   T  M  P  RSGH++  +   V++FGGC    +G   C+ D   F+L+TL W ++        P+A        L D  L+++GG G++   +  DM  +  R R+W  L++     +  R  GQ+ C  G   L+ FGGS+G  Y + L  + L T R +  +AT+G  +P+ RYKHQA V+GD +YV+GGG++KP    +D++RLDL    W  +   G  PPAR AHTCA D   RA+Y++GGF A+L+ L+   RLDLD
Sbjct:    2 WQQVVFTGSM--PGERSGHSVLAMNGQVFLFGGCGG-SEGNTPCMSDFICFNLSTLTWSKVQAEGTTPSPRASFEMCRGCLPD-TLIIAGGTGSE--GICGDMHEYNARTRRWRQLVARDDPGSRCRYYGQTACPWGDRTLVLFGGSSGHEYTDHLYTFDLETLRFAGPVATTG-DRPSARYKHQAVVVGDELYVLGGGAYKPTAPQLDIFRLDLTRWHWERVAAAGAAPPARVAHTCAYDPRSRALYLWGGFDAELERLNDFYRLDLD 263          
BLAST of mRNA_S-ischiensis_contig10.1617.1 vs. uniprot
Match: A0A6H5JG58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG58_9PHAE)

HSP 1 Score: 192 bits (489), Expect = 1.520e-51
Identity = 121/297 (40.74%), Postives = 152/297 (51.18%), Query Frame = 3
Query:  270 PCARSGHALCVVGSTVYVFGGCAKHRDGADG----------------CLDDLFSFDLATLQWERIALGEGAL-------RPKARRSASMVALE----DGRLLLSGGAGNDPDNVRPDMWVFCPRRRQWSVLLSGSAAAPF---------RQCGQSVCADG-RGRLLFFGGSTGLSYNNDLVEYCLRTNRSQRLATSGCGKPTPRYKHQAFVLGDAMYVIGGGSFKPPCAGIDVYRLDL------ATLEWTAIPTKGIVPPARTAHTCAVDREGRAVYMYGGFSADLQCLDTLCRLDL 1031
            P ARSGH   V    +YVFGGC      +                  CL DL  +DLA  +W  +     A        RP  R  A+M A E    + RL LSGGAG+DP ++R   W FC RRR W +L  G +AAP          R+ G ++  D  R RL+ FGGSTG  Y ND   + L T     LAT+G  +P+PRYKHQAF+  D MYV+GGGSF+P    +DVYRL L      A LEW  +   G  P  R AH  A DR GRA Y++GGF++ ++   T C L L
Sbjct:   17 PTARSGHCATVARDALYVFGGCGHPTAASSASAASVDAQLPAEALPICLGDLHVYDLARQRWSEVRPPTRAADSASEEPRPAERTCAAMCASEGEDAEDRLFLSGGAGDDPYDLRGCCWEFCVRRRAWRLLYEGGSAAPSAAPETMSPCRRIGHTMVHDSTRNRLVIFGGSTGHEYFNDTQAFDLATGTWTALATTG-ERPSPRYKHQAFLDADFMYVVGGGSFEPEGPDLDVYRLPLTAGGGKALLEWERVRPTGTPPRCRAAHGLAWDRVGRAAYIWGGFTSGMELDSTFCALRL 312          
BLAST of mRNA_S-ischiensis_contig10.1617.1 vs. uniprot
Match: A0A7S2UXB8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXB8_9STRA)

HSP 1 Score: 174 bits (442), Expect = 2.650e-47
Identity = 108/302 (35.76%), Postives = 162/302 (53.64%), Query Frame = 3
Query:  159 ILPTSQPRRCCRPPGFYPHRS-QWRRWVQCEPTAGMDAPCARSGHALCVVGSTVYVFGGCAKHRDGADGCLDDLFSFDLATLQWERIALGEGALRPKARRSASMVALEDGRLLLSGGAGNDPDNVR-PDMWVFCPRRRQWSVLLSGSAAAPFRQC-GQSVCADGRGRLLFFGGSTGLSYNNDLVEYCLRTNRSQRLATSGCGKPTPRYKHQAFVLGDAMYVIGGGSFKPPCAGIDVYRLDLATLEWTAIPTKGIVPPARTAHTCAVDREGRAVYMYGGFSADLQCLDTLCRLDLDDMMWSIV 1055
            I+PT+ P RC   P  + H   QW+         GM  P  RSGH + +     Y+FGGC   +   +   D + + DL T++   I +     RP+A  +     L DG ++++GGAG  P+ V   D+  F     +W  L +     PF +C GQSV A  +  L+FFGG+TG  Y+ND+ ++  RT     L T+G  +P+PRYK +  ++G  M++IGGG+F+P    +D++ LDL TL+WT + T G +P  R AHTCA D     +Y++GG S     L     LD+  M+WS+V
Sbjct:   26 IVPTNLPERCT--PKLHSHDVFQWQ-------LTGMGVP--RSGHGVSIHSGKAYIFGGCEGVQRNVEHITDSMMAVDLETMECRDIHVTGVKPRPRASFAICEGPL-DGTIIVAGGAG--PNRVLYSDILEFHVGSNKWRTLAT-EGTTPFCKCYGQSVRAY-KSSLIFFGGTTGERYSNDVYQFDTRTGHWICLETTG-NQPSPRYKQEMVIIGSKMFIIGGGNFRPKSTSMDMFCLDLKTLKWTEVQTYGKIPSGRVAHTCAYDERDHKLYLWGGISIKRDQLAECFVLDMKSMIWSVV 310          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig10.1617.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CLJ1_9STRA2.250e-9552.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CMQ1_9STRA1.310e-7858.69Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CQE2_9STRA8.190e-6744.22Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CEB6_9STRA3.150e-6441.94Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FP90_ECTSI7.340e-6142.96Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZFC9_9STRA1.030e-5942.61Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FP81_ECTSI1.260e-5844.66Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3ULU8_HETAK4.560e-5238.29Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A6H5JG58_9PHAE1.520e-5140.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2UXB8_9STRA2.650e-4735.76Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig10contigS-ischiensis_contig10:3153257..3154604 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score212.6
Seed ortholog evalue2.9e-52
Seed eggNOG ortholog2880.D7FP90
KEGG koko:K20285
EggNOG free text desc.nitrile biosynthetic process
EggNOG OGsKOG0379@1,KOG0379@2759
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Hectar predicted targeting categoryother localisation
Exons2
Model size1124
Cds size1059
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig10.1617.1prot_S-ischiensis_contig10.1617.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig10 3153257..3154539 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815539.5384228-CDS-S-ischiensis_contig10:3153256..31540191622815539.5384228-CDS-S-ischiensis_contig10:3153256..3154019Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3153257..3154019 -
1695739756.8651056-CDS-S-ischiensis_contig10:3153256..31540191695739756.8651056-CDS-S-ischiensis_contig10:3153256..3154019Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3153257..3154019 -
1622815539.5489993-CDS-S-ischiensis_contig10:3154243..31545391622815539.5489993-CDS-S-ischiensis_contig10:3154243..3154539Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3154244..3154539 -
1695739756.8790905-CDS-S-ischiensis_contig10:3154243..31545391695739756.8790905-CDS-S-ischiensis_contig10:3154243..3154539Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3154244..3154539 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815539.5654278-UTR-S-ischiensis_contig10:3154539..31546041622815539.5654278-UTR-S-ischiensis_contig10:3154539..3154604Schizocladia ischiensis KU_0333UTRS-ischiensis_contig10 3154540..3154604 -
1695739756.891797-UTR-S-ischiensis_contig10:3154539..31546041695739756.891797-UTR-S-ischiensis_contig10:3154539..3154604Schizocladia ischiensis KU_0333UTRS-ischiensis_contig10 3154540..3154604 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig10.1617.1

>prot_S-ischiensis_contig10.1617.1 ID=prot_S-ischiensis_contig10.1617.1|Name=mRNA_S-ischiensis_contig10.1617.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=353bp
MVLLLCEAGRRLKDLMGQGHALMKRRENGECILPTSQPRRCCRPPGFYPH
RSQWRRWVQCEPTAGMDAPCARSGHALCVVGSTVYVFGGCAKHRDGADGC
LDDLFSFDLATLQWERIALGEGALRPKARRSASMVALEDGRLLLSGGAGN
DPDNVRPDMWVFCPRRRQWSVLLSGSAAAPFRQCGQSVCADGRGRLLFFG
GSTGLSYNNDLVEYCLRTNRSQRLATSGCGKPTPRYKHQAFVLGDAMYVI
GGGSFKPPCAGIDVYRLDLATLEWTAIPTKGIVPPARTAHTCAVDREGRA
VYMYGGFSADLQCLDTLCRLDLDDMMWSIVAPAAAVSGGGSSGNGQVGEP
GAT
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mRNA from alignment at S-ischiensis_contig10:3153257..3154604-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig10.1617.1 ID=mRNA_S-ischiensis_contig10.1617.1|Name=mRNA_S-ischiensis_contig10.1617.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1348bp|location=Sequence derived from alignment at S-ischiensis_contig10:3153257..3154604- (Schizocladia ischiensis KU_0333)
CACGGCTGACCGACGGGTAACTCAAGGCGGAGGGACGGGGCGGGGAGGGC GCGGGCTGCCGCTGGATGGTCCTTTTGCTGTGCGAGGCCGGCCGACGTCT AAAAGACCTCATGGGTCAGGGACACGCCCTCATGAAAAGGCGCGAGAATG GAGAGTGCATATTGCCGACGTCCCAGCCAAGGAGGTGTTGCCGGCCACCA GGCTTCTATCCGCACCGGTCGCAGTGGCGCCGGTGGGTGCAATGCGAGCC AACTGCCGGCATGGACGCGCCGTGTGCTCGTAGCGGCCACGCATTATGCG TCGTTGGATCCACCGTCTACGTGTTCGGGGGCTGCGCCAAGCATCGCGAT GGAGCGGACGGGTGAGATAAATGGATCCACAGGTCCACTGCACGATGTCG CTCGCTGGGTACTCGTTGCGTTCCACAGGGACGAATATACCCGTGTTTCA GCAATCACCTCGAGACACAGCTGCCGGGTAGGTGCGTGTTGAGAGAGTTG CTTGCCGGAGACAAAATCAGTTGCCCTTTGCATGGACCTGACGGGCCAAC GCCGACGCCTCTTTGTACTGCGCGCATGTCCGCAGGTGTCTTGATGACCT GTTCTCTTTCGACCTGGCCACTCTCCAATGGGAACGGATAGCGCTCGGCG AGGGCGCGCTCCGCCCCAAGGCGCGGCGTTCTGCGTCCATGGTGGCGCTG GAGGACGGCAGGCTGCTGCTGTCGGGTGGTGCCGGCAATGACCCGGACAA CGTCCGGCCAGACATGTGGGTGTTTTGTCCTCGAAGGCGCCAGTGGTCTG TCCTCTTGAGCGGGTCGGCGGCCGCCCCATTCCGGCAGTGCGGCCAGTCC GTGTGCGCCGACGGCCGCGGGCGCCTGCTCTTCTTTGGGGGCTCGACGGG GCTGTCCTACAACAACGACCTCGTCGAGTACTGCCTCCGCACCAACAGGT CGCAAAGGCTCGCGACGAGCGGGTGCGGCAAGCCAACCCCGCGATACAAG CACCAGGCCTTCGTGCTGGGCGACGCCATGTACGTGATCGGCGGAGGCAG CTTCAAGCCGCCGTGCGCCGGTATCGACGTGTATCGCCTGGACCTGGCCA CCCTTGAGTGGACCGCCATCCCGACCAAGGGCATTGTCCCCCCGGCGCGC ACGGCTCACACCTGCGCAGTGGATCGGGAGGGGCGCGCCGTGTACATGTA CGGCGGGTTTTCCGCCGACCTCCAGTGCCTCGACACCCTCTGCCGCCTCG ATCTGGACGACATGATGTGGTCGATCGTCGCGCCGGCGGCGGCGGTGTCT GGTGGCGGGAGCAGTGGCAACGGGCAGGTGGGCGAGCCTGGCGCCACA
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Coding sequence (CDS) from alignment at S-ischiensis_contig10:3153257..3154604-

>mRNA_S-ischiensis_contig10.1617.1 ID=mRNA_S-ischiensis_contig10.1617.1|Name=mRNA_S-ischiensis_contig10.1617.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2118bp|location=Sequence derived from alignment at S-ischiensis_contig10:3153257..3154604- (Schizocladia ischiensis KU_0333)
ATGGTCCTTTTGCTGTGCGAGGCCGGCCGACGTCTAAAAGACCTCATGGG
TCAGGGACACGCCCTCATGAAAAGGCGCGAGAATGGAGAGTGCATATTGC
CGACGTCCCAGCCAAGGAGGTGTTGCCGGCCACCAGGCTTCTATCCGCAC
CGGTCGCAGTGGCGCCGGTGGGTGCAATGCGAGCCAACTGCCGGCATGGA
CGCGCCGTGTGCTCGTAGCGGCCACGCATTATGCGTCGTTGGATCCACCG
TCTACGTGTTCGGGGGCTGCGCCAAGCATCGCGATGGAGCGGACGGATGG
TCCTTTTGCTGTGCGAGGCCGGCCGACGTCTAAAAGACCTCATGGGTCAG
GGACACGCCCTCATGAAAAGGCGCGAGAATGGAGAGTGCATATTGCCGAC
GTCCCAGCCAAGGAGGTGTTGCCGGCCACCAGGCTTCTATCCGCACCGGT
CGCAGTGGCGCCGGTGGGTGCAATGCGAGCCAACTGCCGGCATGGACGCG
CCGTGTGCTCGTAGCGGCCACGCATTATGCGTCGTTGGATCCACCGTCTA
CGTGTTCGGGGGCTGCGCCAAGCATCGCGATGGAGCGGACGGGTGTCTTG
ATGACCTGTTCTCTTTCGACCTGGCCACTCTCCAATGGGAACGGATAGCG
CTCGGCGAGGGCGCGCTCCGCCCCAAGGCGCGGCGTTCTGCGTCCATGGT
GGCGCTGGAGGACGGCAGGCTGCTGCTGTCGGGTGGTGCCGGCAATGACC
CGGACAACGTCCGGCCAGACATGTGGGTGTTTTGTCCTCGAAGGCGCCAG
TGGTCTGTCCTCTTGAGCGGGTCGGCGGCCGCCCCATTCCGGCAGTGCGG
CCAGTCCGTGTGCGCCGACGGCCGCGGGCGCCTGCTCTTCTTTGGGGGCT
CGACGGGGCTGTCCTACAACAACGACCTCGTCGAGTACTGCCTCCGCACC
AACAGGTCGCAAAGGCTCGCGACGAGCGGGTGCGGCAAGCCAACCCCGCG
ATACAAGCACCAGGCCTTCGTGCTGGGCGACGCCATGTACGTGATCGGCG
GAGGCAGCTTCAAGCCGCCGTGCGCCGGTATCGACGTGTATCGCCTGGAC
CTGGCCACCCTTGAGTGGACCGCCATCCCGACCAAGGGCATTGTCCCCCC
GGCGCGCACGGCTCACACCTGCGCAGTGGATCGGGAGGGGCGCGCCGTGT
ACATGTACGGCGGGTTTTCCGCCGACCTCCAGTGCCTCGACACCCTCTGC
CGCCTCGATCTGGACGACATGATGTGGTCGATCGTCGCGCCGGCGGCGGC
GGTGTCTGGTGGCGGGAGCAGTGGCAACGGGCAGGTGGGCGAGCCTGGCG
CCACAGTGTCTTGATGACCTGTTCTCTTTCGACCTGGCCACTCTCCAATG
GGAACGGATAGCGCTCGGCGAGGGCGCGCTCCGCCCCAAGGCGCGGCGTT
CTGCGTCCATGGTGGCGCTGGAGGACGGCAGGCTGCTGCTGTCGGGTGGT
GCCGGCAATGACCCGGACAACGTCCGGCCAGACATGTGGGTGTTTTGTCC
TCGAAGGCGCCAGTGGTCTGTCCTCTTGAGCGGGTCGGCGGCCGCCCCAT
TCCGGCAGTGCGGCCAGTCCGTGTGCGCCGACGGCCGCGGGCGCCTGCTC
TTCTTTGGGGGCTCGACGGGGCTGTCCTACAACAACGACCTCGTCGAGTA
CTGCCTCCGCACCAACAGGTCGCAAAGGCTCGCGACGAGCGGGTGCGGCA
AGCCAACCCCGCGATACAAGCACCAGGCCTTCGTGCTGGGCGACGCCATG
TACGTGATCGGCGGAGGCAGCTTCAAGCCGCCGTGCGCCGGTATCGACGT
GTATCGCCTGGACCTGGCCACCCTTGAGTGGACCGCCATCCCGACCAAGG
GCATTGTCCCCCCGGCGCGCACGGCTCACACCTGCGCAGTGGATCGGGAG
GGGCGCGCCGTGTACATGTACGGCGGGTTTTCCGCCGACCTCCAGTGCCT
CGACACCCTCTGCCGCCTCGATCTGGACGACATGATGTGGTCGATCGTCG
CGCCGGCGGCGGCGGTGTCTGGTGGCGGGAGCAGTGGCAACGGGCAGGTG
GGCGAGCCTGGCGCCACA
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