mRNA_S-ischiensis_contig10.1614.1 (mRNA) Schizocladia ischiensis KU_0333
|
Overview
Homology
BLAST of mRNA_S-ischiensis_contig10.1614.1 vs. uniprot
Match: D8LFI3_ECTSI (CobW C-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFI3_ECTSI) HSP 1 Score: 103 bits (257), Expect = 3.260e-21 Identity = 48/102 (47.06%), Postives = 67/102 (65.69%), Query Frame = 1
Query: 367 GGSMALQVLGAWWAAVSRDRWPPGQESAIVEDFEGEFGDRRQELVFIGLGVSEGEARDIITSALNACLLSDDEIQAYQQNMKEERGDKGLMELFPSPFPIEY 672
G S + LG WW ++ R+ WPPG A++EDFEG++GDRRQELVFIG+G+ E R I AL+ CLL+D+E++ Y+ E D+ L E FPSP + +
Sbjct: 499 GASFEVLCLGRWWDSLERELWPPGSAEAVMEDFEGKYGDRRQELVFIGMGMCEESTRGPIVKALDGCLLTDEEMEVYES--VRETADE-LPEAFPSPLRVRF 597
BLAST of mRNA_S-ischiensis_contig10.1614.1 vs. uniprot
Match: A0A836CKL1_9STRA (CobW/HypB/UreG, nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKL1_9STRA) HSP 1 Score: 102 bits (254), Expect = 9.060e-21 Identity = 52/102 (50.98%), Postives = 66/102 (64.71%), Query Frame = 1
Query: 367 GGSMALQVLGAWWAAVSRDRWPPGQESAIVEDFEGEFGDRRQELVFIGLGVSEGEARDIITSALNACLLSDDEIQAYQQNMKEERGDKGLMELFPSPFPIEY 672
G +Q LG WWA+V R WP GQE+AI EDFE GDRRQELVFIGL V+ + + II SAL+ CLL+D+E Y+ + K++ K L E FP+ I Y
Sbjct: 593 GRHFEMQCLGRWWASVPRPAWPQGQEAAITEDFEEPHGDRRQELVFIGLDVANQKVQSIIASALDECLLTDEEWAVYEASRKDQ---KKLDEAFPNFIAIRY 691
BLAST of mRNA_S-ischiensis_contig10.1614.1 vs. uniprot
Match: A0A0G4HWR3_9ALVE (CobW C-terminal domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HWR3_9ALVE) HSP 1 Score: 89.0 bits (219), Expect = 9.590e-18 Identity = 47/117 (40.17%), Postives = 67/117 (57.26%), Query Frame = 1
Query: 367 GGSMALQVLGAWWAAVSRDRWPPGQESAIVEDFEGEFGDRRQELVFIGLGVSEGEARDIITSALNACLLSDDEIQAYQQNM---------KEERG----DKGLMELFPSPFPIEYAV 678
G + +Q+LG WW R+ WP E I+ DFEGEFGDRRQ+LVFIG V++ + R+ + AL+A LL+D E++AY Q K +RG G +LFP P + ++
Sbjct: 72 GRTFEMQLLGLWWDVRDREDWPEEFEEQILRDFEGEFGDRRQQLVFIGTSVADPKLRNELEDALDAALLTDAELEAYTQEREKGGQGGKGKAKRGRPRKSDGFQKLFPMPSLLAESI 188
BLAST of mRNA_S-ischiensis_contig10.1614.1 vs. uniprot
Match: A0A0G4F4G2_VITBC (CobW C-terminal domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F4G2_VITBC) HSP 1 Score: 91.3 bits (225), Expect = 5.530e-17 Identity = 44/95 (46.32%), Postives = 61/95 (64.21%), Query Frame = 1
Query: 367 GGSMALQVLGAWWAAVSRDRWPPGQESAIVEDFEGEFGDRRQELVFIGLGVSEGEARDIITSALNACLLSDDEIQAYQQNMKEERGDKGLMELFP 651
G + + G WWA+VS WP + I+EDF+GEFGDRRQE+VFIG V++ + R + SAL+ LLSD+E+ Y+ N K+ D LM+ FP
Sbjct: 508 GRHLDFETFGRWWASVSAKDWPEQWKGKILEDFDGEFGDRRQEIVFIGREVAQSDNRQQLESALDDALLSDEELSVYRSNAKD---DAELMKAFP 599
BLAST of mRNA_S-ischiensis_contig10.1614.1 vs. uniprot
Match: A0A8J2SRV0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SRV0_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 6.100e-16 Identity = 45/96 (46.88%), Postives = 61/96 (63.54%), Query Frame = 1
Query: 367 GGSMALQVLGAWWAAVSRDRWPPGQESAIVEDFEGEFGDRRQELVFIGLGVSEGEARDIITSALNACLLSDDEIQAYQQNMKEERGDKGLMELFPS 654
G A +++G WWA + DR+P ++I+ DF+GE GDRRQE+VFIG+G +A IT AL+ACLL+DDE+ AY+ D ELFPS
Sbjct: 528 GNHFAAELMGRWWATLPEDRYPEDMRASILSDFDGEDGDRRQEIVFIGVGAVAQQAA--ITEALDACLLTDDEMAAYRA-----ADDDARPELFPS 616
BLAST of mRNA_S-ischiensis_contig10.1614.1 vs. uniprot
Match: A0A6S8CKI4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8CKI4_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 1.000e-13 Identity = 39/90 (43.33%), Postives = 53/90 (58.89%), Query Frame = 1
Query: 388 VLGAWWAAVSRDRWPPGQESAIVEDFEGEFGDRRQELVFIGLGVSEGEARDIITSALNACLLSDDEIQAYQQNMKEERGDKGLMELFPSP 657
+LG WWA + R+ WP Q AI DF+G+FGDRRQE+VFIG+ + +I AL+ACLL+DDE Y + E+ F +P
Sbjct: 531 ILGRWWATLPREYWPADQVEAIEADFDGQFGDRRQEIVFIGMDALSNQK--LIEDALDACLLTDDEFSVYTELDSEDARKARFPSYFENP 618
BLAST of mRNA_S-ischiensis_contig10.1614.1 vs. uniprot
Match: A0A656HBS0_THINJ (Cobalamin synthesis protein P47K n=2 Tax=Thiothrix TaxID=1030 RepID=A0A656HBS0_THINJ) HSP 1 Score: 80.1 bits (196), Expect = 2.170e-13 Identity = 48/112 (42.86%), Postives = 63/112 (56.25%), Query Frame = 1
Query: 337 SAGRLSACRPGGSMALQVLGAWWAAVSRDRWPPGQE--SAIVEDFEGEFGDRRQELVFIGLGVSEGEARDIITSALNACLLSDDEIQAYQQNMKEERGDKGLMELFPSPFPI 666
SAG S + GG + L G WWAAV RD WP E I+ FEG++GDRRQ+LVFIG G+ + IT+AL++ LL DDE+Q ++ K FP P P+
Sbjct: 305 SAGEWS--QAGGLLRLGKAGFWWAAVHRDDWPDDAEYREHILAQFEGDYGDRRQQLVFIGQGLDKAR----ITAALDSALLDDDEMQLGPESWKR----------FPDPMPV 400
BLAST of mRNA_S-ischiensis_contig10.1614.1 vs. uniprot
Match: A0A7S4F334_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F334_CHRCT) HSP 1 Score: 77.0 bits (188), Expect = 2.850e-13 Identity = 36/69 (52.17%), Postives = 48/69 (69.57%), Query Frame = 1
Query: 367 GGSMALQVLGAWWAAVSRDRWPPGQESAIVEDFEGEFGDRRQELVFIGLGVSEGEARDIITSALNACLL 573
G + L +G WWA++ R+RWP E AI+EDF+G GDRRQELVFIG + E E I++AL+ACL+
Sbjct: 136 GKRLDLSEMGRWWASIERERWPSLHEDAILEDFDGPNGDRRQELVFIGTALQEAE----ISAALDACLV 200
BLAST of mRNA_S-ischiensis_contig10.1614.1 vs. uniprot
Match: A0A7S2Y1P1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1P1_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 2.360e-12 Identity = 42/113 (37.17%), Postives = 61/113 (53.98%), Query Frame = 1
Query: 367 GGSMALQVLGAWWAAVSRDRWPPGQESAIVEDFEGEFGDRRQELVFIGL-----GVSEGEA------RDIITSALNACLLSDDEIQAYQQNMKEERGDKGLMELFPSPFPIEY 672
G +Q G WWA V R+ WPP I++DFEG+ GDRRQE+VFIG+ V +GE ++II AL++CL +D+E++ + +G + E F I Y
Sbjct: 394 GSQFEMQCQGQWWAGVPREMWPPENIEVILQDFEGDGGDRRQEIVFIGMLGANIAVEDGEPSESKTPQEIIEDALDSCLATDEEMEVLKT-----QGIREATEAFRGNMKIRY 501
BLAST of mRNA_S-ischiensis_contig10.1614.1 vs. uniprot
Match: A0A7S4F2B8_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F2B8_CHRCT) HSP 1 Score: 77.0 bits (188), Expect = 2.400e-12 Identity = 36/69 (52.17%), Postives = 48/69 (69.57%), Query Frame = 1
Query: 367 GGSMALQVLGAWWAAVSRDRWPPGQESAIVEDFEGEFGDRRQELVFIGLGVSEGEARDIITSALNACLL 573
G + L +G WWA++ R+RWP E AI+EDF+G GDRRQELVFIG + E E I++AL+ACL+
Sbjct: 329 GKRLDLSEMGRWWASIERERWPSLHEDAILEDFDGPNGDRRQELVFIGTALQEAE----ISAALDACLV 393 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig10.1614.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig10.1614.1 >prot_S-ischiensis_contig10.1614.1 ID=prot_S-ischiensis_contig10.1614.1|Name=mRNA_S-ischiensis_contig10.1614.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=138bp MTAKAIVPRYKLFESQPKPVTVSAGRLSACRPGGSMALQVLGAWWAAVSRback to top mRNA from alignment at S-ischiensis_contig10:3132559..3135694- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig10.1614.1 ID=mRNA_S-ischiensis_contig10.1614.1|Name=mRNA_S-ischiensis_contig10.1614.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3136bp|location=Sequence derived from alignment at S-ischiensis_contig10:3132559..3135694- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig10:3132559..3135694- >mRNA_S-ischiensis_contig10.1614.1 ID=mRNA_S-ischiensis_contig10.1614.1|Name=mRNA_S-ischiensis_contig10.1614.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=828bp|location=Sequence derived from alignment at S-ischiensis_contig10:3132559..3135694- (Schizocladia ischiensis KU_0333)back to top |