mRNA_S-ischiensis_contig10.1597.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig10.1597.1 vs. uniprot
Match: D7G8K0_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8K0_ECTSI) HSP 1 Score: 233 bits (593), Expect = 2.580e-68 Identity = 140/343 (40.82%), Postives = 176/343 (51.31%), Query Frame = 1
Query: 1 LMEACSCELPDEAQRADISGSGYVGAVTEDLEYFVRLEHVDAGDNSFPFDSFSSLPKLQELRLHCNAIADL----------------GPVQGYASLRRLDLSYNNLGGKDAVSDLCRLXXXXXXXXXXXXXXXLPPSFAELRNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNYFTAVHLAPEDVELKFXXXXXXXXXXXXIVREEDVLSLVYLTRLERVILYGNPLCGPNGEDPLGLCVDELVEAANSSRDGWTDKPLEVVTEMPRKNPRR-----PAHSRRRPYCDIGLTMVQEQVVPSSSAFRAAGNQALFQFE------PGGGEASPQEIVEATL 948
LM+AC C+LPDE +RAD+SG G V V ED+ +FVRL+ VDAGDNS PFDSF LP+L+ELRL CN+I D+ GY LRRLDLSYN+L G A+S L L LP + A L FNYFT ++L + E F I E DV+ +V RL+R+ILYGNPL GP GED LGLCV++LV ++ R + P+EV+TE+PR R RPYCD G+TMV E +P +S FR +GN+ LF+FE G G+A IVEATL
Sbjct: 2 LMDACGCDLPDEGRRADVSGRGLVSVVREDMSFFVRLQAVDAGDNSLPFDSFLDLPRLEELRLPCNSIRDIDGRKILTQLQLGGGDGNSGNGYGQLRRLDLSYNSLSG-GALSVLTHLPSLTDLDLTCNGLVDLPVAMARFPVLQKLSLERNQLESDAVFDVLSRLPGLRELNLAFNYFTGINLDLDIAEQAFPLLEALDLGFNFIGSESDVVVVVLFERLQRLILYGNPLAGPTGEDSLGLCVEKLVAESDRIRGDYASCPIEVITELPRIRQTRGXXXXXXXXXXRPYCDTGVTMVDEGCLPPASTFRDSGNRTLFRFERKPSGSSGDGDAPDDNIVEATL 343
BLAST of mRNA_S-ischiensis_contig10.1597.1 vs. uniprot
Match: A0A836C9W6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9W6_9STRA) HSP 1 Score: 186 bits (473), Expect = 2.740e-50 Identity = 122/326 (37.42%), Postives = 166/326 (50.92%), Query Frame = 1
Query: 1 LMEACSCELPDEAQRADISGSGYVGAVTEDLEYFVRLEHVDAGDNSFPFDSFSSLPKLQELRLHCNAI----ADLGPVQGYASLRRLDLSYNNLGGKDAVSDLCRLXXXXXXXXXXXXXXXLPPSFAELRNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNYFTAVHLAPEDVELKFXXXXXXXXXXXXIVREEDVLSLVYLTRLERVILYGNPLCGPNGEDPLGLCVDELVEAANSSRDGWTDKPLEVVTEMPRKNPRRPA--HSRRRPYCDIG---LTMVQEQVVPSSSAFRAAGNQALFQFEPGGGE-ASPQEIVEATL 948
++E +LPD A+R+DISG + V +DL YF +L+ +DAGDNS F+ L +L ELRL CN I A P Y +L RLDLSYN L G A++ L +L LP A L L FNYF A+ E ++L F I + D + LV L +L RVILYGNPLCGP+GED G+ ++ L +AA+ +RDGW+ LE +TEMPR R +SRRR YC++ +T+V E VP+S +A GN+A+F+FE + A+ +I ATL
Sbjct: 162 ILEGSGVDLPDGARRSDISGGNFTEVVQDDLGYFNKLQELDAGDNSLSLSCFACLQQLHELRLQCNGITAPPAPPLPPASYPALTRLDLSYNALSGA-AIAQLAQLPVLKYLDLSCNGLTSLPAELAALPCLECLVLERNQLEGGEVMATLATLPVLRELSLAFNYFAAI----EALDLAFNY----------IGAQADAMPLVLLPKLARVILYGNPLCGPSGEDLSGITIEGLEDAADRARDGWSVPLLEFITEMPRPKHERAGLKNSRRRMYCEMTRAPITLVSEAPVPASRDLKATGNKAVFKFEEARSDNAAAMDIATATL 472
BLAST of mRNA_S-ischiensis_contig10.1597.1 vs. uniprot
Match: A0A7S3XTX8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTX8_HETAK) HSP 1 Score: 170 bits (430), Expect = 1.890e-44 Identity = 107/299 (35.79%), Postives = 139/299 (46.49%), Query Frame = 1
Query: 1 LMEACSCELPDEAQRADISGSGYVGAVTEDLEYFVRLEHVDAGDNSFPFDSFSSLPKLQELRLHCNAIADLGPVQGYASLRRLDLSYNNLGGKDAVSDLCRLXXXXXXXXXXXXXXXLPPSFAELRNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNYFTAVHLAPED--VELKFXXXXXXXXXXXXIVREEDVLSLVYLTRLERVILYGNPLCGPNGEDPLGLCVDELVEAANSSRDGWTDKPLEVVTEMPRKNPRRPAHSRRRPYCDIGLTMVQEQVVPSSSAFRAAGNQALF 891
L++A + PDEA+RAD SG GY T DL YFVRL +D +N + F LP+L++LRL N + LGP +GY +L RLDLSYN + A+ L L LP + A L + F + AP + E +F + E DVL L L L RVILYGNPL GP GEDP G CV + A +R GW+ +PLEVV E PR+ R RRPY D+ +V E +P+ FR AGN+ +
Sbjct: 105 LLQAAGVQFPDEARRADASGKGYEEVNTADLGYFVRLATLDVSENHLALEWFCRLPRLKDLRLAYNGLTALGPQEGYPALMRLDLSYNAVEPA-ALGCLAALPRLRALDLTSNGLAELPDALAGFHTLEILTLEHNQFDGEIPLVLAEIPKLREL----YLAFNFIDTAPAECAAEGQFPALDLLDLAFNYVAAERDVLPLAALPVLTRVILYGNPLAGPTGEDPAGACVRRFLHLAERARQGWSARPLEVVLEQPRR--RAAERVNRRPYRDVETVVVDEAPLPTGGEFREAGNRLML 396
BLAST of mRNA_S-ischiensis_contig10.1597.1 vs. uniprot
Match: F0YEQ3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEQ3_AURAN) HSP 1 Score: 130 bits (326), Expect = 4.250e-30 Identity = 125/320 (39.06%), Postives = 158/320 (49.38%), Query Frame = 1
Query: 1 LMEACSCELPDEAQRADISGSGYVGAVTEDLEYFVRLEHVDAGDNSFPFDSFSSLPKLQELRLHCNAIADLGPVQGYASLRRL---DLSYNNLGGKDAVSDLCRLXXXXXXXXXXXXXXXLPPSFAELRNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNYFTAVH----------LAPEDVELK----FXXXXXXXXXXXXIVREEDVLSLVYLTRLERVILYGNPLCGPNGEDPLGLCVDELVEAANSSRDGWTDKPLEVVTEMPRKNPRRPAHSRR------RPYCDIGLTMVQEQVVPSSSAFRAAGNQALF 891
L+EAC E PDE RAD+SG DLEYF RL +D DN P F LP+L+ELR N + QG ++ +RL DLSYN LG + AV++L +XXXXXXXXXXXXXXX XXXXXXXXXXXX + H E ++ F I E DV+ L L +LE + LYGNPL GP ED G V E A +RDGWTD+ LEV TE+PR+ R + + R + ++ LT V E +P+++ FRA GN+AL
Sbjct: 75 LLEACGVEFPDEGHRADVSGYAASSVSETDLEYFPRLATLDCSDNCLPLAPFGKLPRLKELRFAANGLERFDWPQGSSAWQRLQVLDLSYNALGVQ-AVTNLAGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDAQDDCGNVCALSGLTRLRELSLAHNKLTGFPTLDAVAEATKVSETAIFVELVALNLAWNKIHTEGDVMGLTLLPKLEHLALYGNPLLGPAKEDASGGSVRNFAECAADARDGWTDRLLEVSTEVPRRRAPRGSMAAATNARGDRRFRNVSLTRVPEPPIPTAAEFRARGNRALL 393
BLAST of mRNA_S-ischiensis_contig10.1597.1 vs. uniprot
Match: A0A7S2Y223_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y223_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 1.260e-20 Identity = 44/101 (43.56%), Postives = 65/101 (64.36%), Query Frame = 1
Query: 592 SLVYLTRLERVILYGNPLCGPNGEDPLGLCVDELVEAANSSRDGWTDKPLEVVTEMPRKNPRRPAHSRRRPYCDIGLTMVQEQVVPSSSAFRAAGNQALFQ 894
+L L ++ R+ILYGNP+ GP+GEDP G CV + A R GW ++PLEVV E PR+ + RRPY D+ +V E+ +PS++ F+ AGN+ L++
Sbjct: 1 ALAKLPQVTRIILYGNPIAGPSGEDPSGACVQGFLATAEQFRHGWIERPLEVVLEEPRQKVSERVN--RRPYRDVETVVVNEKPIPSAAQFKEAGNKRLYE 99
BLAST of mRNA_S-ischiensis_contig10.1597.1 vs. uniprot
Match: A0A7S0JFT0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JFT0_9EUKA) HSP 1 Score: 78.2 bits (191), Expect = 7.390e-13 Identity = 37/91 (40.66%), Postives = 52/91 (57.14%), Query Frame = 1
Query: 1 LMEACSCELPDEAQRADISGSGYVGAVTEDLEYFVRLEHVDAGDNSFPFDSFSSLPKLQELRLHCNAIADLG-PVQGYASLRRLDLSYNNL 270
+++A E P EA++ + G G +TEDL YF +L H+D GDN + + LP L EL L CN ++ L P G+ L L+LSYN L
Sbjct: 86 MLQAAHVEDPAEAEKVVLEGCGITAVITEDLNYFTQLTHLDLGDNRVQLSALAYLPALHELHLDCNGLSQLAVPAGGFPQLEVLNLSYNGL 176
BLAST of mRNA_S-ischiensis_contig10.1597.1 vs. uniprot
Match: A0A7S2S8V5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S8V5_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 8.210e-12 Identity = 34/97 (35.05%), Postives = 55/97 (56.70%), Query Frame = 1
Query: 478 FNYFTAVHLAPEDVELKFXXXXXXXXXXXXIVREEDVLSLVYLTRLERVILYGNPLCGPNGEDPLGLCVDELVEAANSSRDGWTDKPLEVVTEMPRK 768
FNY T A V+ +F I E+D++ +V+L +LE +++YGNPL GP GEDP G ++ L + R G++ + L+++TE P+K
Sbjct: 10 FNYLTVFPRAATGVD-RFPCLHTLNLAFNYIASEDDLVPVVHLHKLEMLVIYGNPLLGPTGEDPSGTSIEYLAQCLLDVRTGYSTRALDILTEKPKK 105
BLAST of mRNA_S-ischiensis_contig10.1597.1 vs. uniprot
Match: A0A7S1QEK3_NEODS (Hypothetical protein (Fragment) n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1QEK3_NEODS) HSP 1 Score: 74.7 bits (182), Expect = 3.650e-11 Identity = 60/130 (46.15%), Postives = 76/130 (58.46%), Query Frame = 1
Query: 1 LMEACSCELPDEAQRADISGSGYVGAVTEDLEYFVRLEHVDAGDNSFPFDSFSSLPKLQELRLHCNAIADLG--PVQGYASLRRLDLSYNNLGGKDAVSDLCRLXXXXXXXXXXXXXXXLPPSFAELRNL 384
+++A P +A IS S VGAV EDL YF+ + D G+NS L L+ L LHCN + DLG P + L L+LS+N L + ++ L XXXXXXXXXXXXXXXLP FAELR+L
Sbjct: 96 MLDATGVRDPADATAVTISDSNVVGAVAEDLSYFINVTTADFGENSLTMAELVPLTGLEALHLHCNCLGDLGGIPAGSFPKLHTLNLSFNQLR-PEQLAALAAXXXXXXXXXXXXXXXXLPNEFAELRSL 224
BLAST of mRNA_S-ischiensis_contig10.1597.1 vs. uniprot
Match: A0A5B8MU43_9CHLO (Uncharacterized protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MU43_9CHLO) HSP 1 Score: 62.8 bits (151), Expect = 2.810e-7 Identity = 42/104 (40.38%), Postives = 56/104 (53.85%), Query Frame = 1
Query: 1 LMEACSCELPDEAQRADISGSGYVGAVTEDLEYFVRLEHVDAGDNSFPFDSFSSLPKLQELRLHCNAIADLG-PVQG-YASLRRLDLSYNNLGGKDAVSDLCRL 306
++ A LP+E AD+SG GY EDLEYF L +D DN S +L ELR N + +L +G +ASL+ LD+SYN LG K A+ +L L
Sbjct: 74 ILAAARARLPEEVHVADLSGQGYDTFEEEDLEYFHNLRLLDLSDNRLGSVEELSRLRLTELRAPVNNLRELNVSFRGAFASLKVLDVSYNELGPK-ALEELSTL 176 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig10.1597.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig10.1597.1 >prot_S-ischiensis_contig10.1597.1 ID=prot_S-ischiensis_contig10.1597.1|Name=mRNA_S-ischiensis_contig10.1597.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=319bp MEACSCELPDEAQRADISGSGYVGAVTEDLEYFVRLEHVDAGDNSFPFDSback to top mRNA from alignment at S-ischiensis_contig10:2983653..2984905- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig10.1597.1 ID=mRNA_S-ischiensis_contig10.1597.1|Name=mRNA_S-ischiensis_contig10.1597.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1253bp|location=Sequence derived from alignment at S-ischiensis_contig10:2983653..2984905- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig10:2983653..2984905- >mRNA_S-ischiensis_contig10.1597.1 ID=mRNA_S-ischiensis_contig10.1597.1|Name=mRNA_S-ischiensis_contig10.1597.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1914bp|location=Sequence derived from alignment at S-ischiensis_contig10:2983653..2984905- (Schizocladia ischiensis KU_0333)back to top |