mRNA_S-ischiensis_contig10.1591.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig10.1591.1 vs. uniprot
Match: UPI0018F3DCE6 (tetratricopeptide repeat protein 33 n=1 Tax=Scyliorhinus canicula TaxID=7830 RepID=UPI0018F3DCE6) HSP 1 Score: 99.0 bits (245), Expect = 2.610e-21 Identity = 56/125 (44.80%), Postives = 81/125 (64.80%), Query Frame = 2
Query: 227 LKVSRLRDEGSLLAESGRFREAMGQWSEALQCDPPTKVTAVLYELLAQAYLGVDEDLAAVKVAHRAVELAPEWAEARVTLGNAQRNFGELALAVGSYREALRLSPSLPEAHEGLEDAEELMRRQR 601
+K RL++EG+LL+E+GR+ EA+G+W EA+Q P A LYE+ AQ L ++E AV+ A AV L P+W EA TLG AQ +FGE+++A+ S++ AL + P E + A EL RRQ+
Sbjct: 55 VKSKRLKEEGALLSENGRYWEAIGRWDEAIQLTPDC---AALYEMKAQVLLMLNEVFQAVQAAEMAVRLNPQWWEALQTLGRAQLSFGEISMALRSFQTALHMRPGESSLEEDMAWALELQRRQQ 176
BLAST of mRNA_S-ischiensis_contig10.1591.1 vs. uniprot
Match: UPI0005401AFE (tetratricopeptide repeat protein 33 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI0005401AFE) HSP 1 Score: 95.5 bits (236), Expect = 7.570e-21 Identity = 55/131 (41.98%), Postives = 78/131 (59.54%), Query Frame = 2
Query: 209 PQERTELKVSRLRDEGSLLAESGRFREAMGQWSEALQCDPPTKVTAVLYELLAQAYLGVDEDLAAVKVAHRAVELAPEWAEARVTLGNAQRNFGELALAVGSYREALRLSPSLPEAHEGLEDAEELMRRQR 601
PQ+ + +G+ LAE G++REA+G+W A+ P A+L+E AQ L V E A+K A RA EL P WAEA +TLG AQ NFGE A+ S+ +AL + P L EA E + A +LM++++
Sbjct: 45 PQQSNQTLADAFVQQGNNLAEDGKYREALGKWEAAITLMPEK---AILHEQKAQVLLEVGESWGALKAATRATELDPSWAEAWITLGRAQLNFGEPDSAMESFDKALAIKPELAEAQEDRQTAMQLMKKRK 172
BLAST of mRNA_S-ischiensis_contig10.1591.1 vs. uniprot
Match: UPI001C4FBEC8 (tetratricopeptide repeat protein 33-like n=1 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C4FBEC8) HSP 1 Score: 94.4 bits (233), Expect = 2.340e-20 Identity = 58/128 (45.31%), Postives = 78/128 (60.94%), Query Frame = 2
Query: 221 TELKVSR-LRDEGSLLAESGRFREAMGQWSEALQCDPPTKVTAVLYELLAQAYLGVDEDLAAVKVAHRAVELAPEWAEARVTLGNAQRNFGELALAVGSYREALRLSPSLPEAHEGLEDAEELMRRQR 601
TELK++ + EG+ LAE GRF EA+G+W AL P AVL+E AQ L V + +A+K A RA EL P WAEA +TLG AQ NFGE A+ S+ AL + P EA + + A L++R++
Sbjct: 60 TELKLAESFQSEGNKLAEEGRFHEALGKWEAALTLMPGR---AVLHEQKAQVLLEVGDAWSALKAATRATELEPSWAEAWITLGRAQLNFGEPDTAIESFDRALAIKPDSEEAKDDRKTASHLVKRRK 184
BLAST of mRNA_S-ischiensis_contig10.1591.1 vs. uniprot
Match: UPI001262C48C (tetratricopeptide repeat protein 33 n=1 Tax=Pistacia vera TaxID=55513 RepID=UPI001262C48C) HSP 1 Score: 93.2 bits (230), Expect = 4.920e-20 Identity = 60/149 (40.27%), Postives = 85/149 (57.05%), Query Frame = 2
Query: 170 DDDGTDHEL---GTLPPQE--RTELKVSRLRDEGSLLAESGRFREAMGQWSEALQCDPPTKVTAVLYELLAQAYLGVDEDLAAVKVAHRAVELAPEWAEARVTLGNAQRNFGELALAVGSYREALRLSPSLPEAHEGLEDAEELMRRQR 601
DD G D +L G P+E T+ + +G+ LAE G++REA+G+W AL P AVL+E AQ L + + A+K A RA EL P WAEA +TLG AQ NFGE A+ S+ +AL + P EA + + A L++R++
Sbjct: 27 DDSGADQDLQKDGDSEPREPLNTKQLAESFQSQGNKLAEDGKYREALGKWEAALNLMPEN---AVLHEQKAQVLLEIGDAWNALKAATRATELEPSWAEAWITLGRAQLNFGEPDSAMESFDKALAMKPDSEEARDDRKTAFHLVKRRK 172
BLAST of mRNA_S-ischiensis_contig10.1591.1 vs. uniprot
Match: UPI001CFB1131 (tetratricopeptide repeat protein 33 n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFB1131) HSP 1 Score: 93.6 bits (231), Expect = 1.250e-19 Identity = 52/105 (49.52%), Postives = 70/105 (66.67%), Query Frame = 2
Query: 230 KVSRLRDEGSLLAESGRFREAMGQWSEALQCDPPTKVTAVLYELLAQAYLGVDEDLAAVKVAHRAVELAPEWAEARVTLGNAQRNFGELALAVGSYREALRLSPS 544
K RL+DEGSLLAESGR +EA+G+W EA+Q P A LYE+ AQ + ++E AV+ A AV+ +P W AR TLG AQ GE+ LA+ S++ AL ++PS
Sbjct: 58 KSKRLKDEGSLLAESGRHQEAVGRWDEAIQLTPED---AALYEMKAQVLMLLNEAFLAVQAAEMAVQRSPRWWMARQTLGRAQLGIGEVMLALKSFQVALHINPS 159
BLAST of mRNA_S-ischiensis_contig10.1591.1 vs. uniprot
Match: A0A540M7M1_MALBA (Uncharacterized protein n=5 Tax=Maleae TaxID=721813 RepID=A0A540M7M1_MALBA) HSP 1 Score: 91.3 bits (225), Expect = 3.420e-19 Identity = 61/141 (43.26%), Postives = 81/141 (57.45%), Query Frame = 2
Query: 191 ELGTLP----PQERTELKVSRLRDEGSLLAESGRFREAMGQWSEALQCDPPTKVTAVLYELLAQAYLGVDEDLAAVKVAHRAVELAPEWAEARVTLGNAQRNFGELALAVGSYREALRLSPSLPEAHEGLEDAEELMRRQR 601
ELG L P + EL S + +G+ LAE G++REA+G+W AL P AVL+E AQ L V + AVK A RA EL P WAEA VTLG AQ NFGE A+ S+ AL + P EA + A +L+++++
Sbjct: 50 ELGKLADESEPSDAAELFHS-FQAQGTKLAEDGKYREALGKWEAALMLRPEN---AVLHEQKAQVLLEVGDAWNAVKTATRATELEPSWAEAWVTLGRAQLNFGEPDSAIQSFDRALAIKPDSEEARDDRHTAMQLVKKRK 186
BLAST of mRNA_S-ischiensis_contig10.1591.1 vs. uniprot
Match: UPI001CFBF168 (tetratricopeptide repeat protein 33 n=1 Tax=Mangifera indica TaxID=29780 RepID=UPI001CFBF168) HSP 1 Score: 90.9 bits (224), Expect = 3.750e-19 Identity = 55/137 (40.15%), Postives = 79/137 (57.66%), Query Frame = 2
Query: 197 GTLPPQERTELK--VSRLRDEGSLLAESGRFREAMGQWSEALQCDPPTKVTAVLYELLAQAYLGVDEDLAAVKVAHRAVELAPEWAEARVTLGNAQRNFGELALAVGSYREALRLSPSLPEAHEGLEDAEELMRRQR 601
G P E ++K + +G+ LAE G++REA+G+W AL P AVL+E AQ L + + A+K A RA EL P WAEA +TLG AQ NFGEL A+ S+ +AL + P E + + A L++R++
Sbjct: 39 GKSEPPEPLDIKHLAQSFQSQGNKLAEDGKYREALGKWEAALNMMPEN---AVLHEQKAQVLLEIGDAWNALKAATRATELEPSWAEAWITLGRAQLNFGELDSAIESFDKALAIKPDSEEVQDDRKAAFHLVKRRK 172
BLAST of mRNA_S-ischiensis_contig10.1591.1 vs. uniprot
Match: A0A1V9Y6H3_9STRA (Tetratricopeptide repeat domain 33-like n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y6H3_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 4.330e-19 Identity = 51/150 (34.00%), Postives = 84/150 (56.00%), Query Frame = 2
Query: 140 NVAAAFADADDDDGTDHELGTLPPQERTELKVSRLRDEGSLLAESGRFREAMGQWSEALQCDPPTKVTAVLYELLAQAYLGVDEDLAAVKVAHRAVELAPEWAEARVTLGNAQRNFGELALAVGSYREALRLSPSLPEAHEGLEDAEELM 589
N + + AD + + E K RL++EG++LA + RFR A+ +W +A++C P VLYEL+AQA+L +DE +++A +A AP+W E VTL Q N+GEL +A+ S +A+ LS E +++ ++L+
Sbjct: 29 NAMSEYEYADSSSAPERPRKVIASLEDVMQKSKRLQEEGNVLANADRFRAAIDRWRQAIECTPEN---GVLYELIAQAHLALDEFFEGIQMAQKATLFAPQWNEGYVTLARCQLNYGELDMALQSMNKAIELSNDKDELQMEVQEIQQLI 175
BLAST of mRNA_S-ischiensis_contig10.1591.1 vs. uniprot
Match: UPI001CC77762 (tetratricopeptide repeat protein 33 n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC77762) HSP 1 Score: 90.9 bits (224), Expect = 4.890e-19 Identity = 55/128 (42.97%), Postives = 79/128 (61.72%), Query Frame = 2
Query: 221 TELKVSR-LRDEGSLLAESGRFREAMGQWSEALQCDPPTKVTAVLYELLAQAYLGVDEDLAAVKVAHRAVELAPEWAEARVTLGNAQRNFGELALAVGSYREALRLSPSLPEAHEGLEDAEELMRRQR 601
+ELK++ + EG+ LAE GRF+EA+G+W AL P AVL+E AQ L + + +++K A RA EL P WAEA +TLG AQ NFGE A+ S+ AL + P EA + + A L++R++
Sbjct: 60 SELKLAESFQSEGNKLAEEGRFQEALGKWEAALTLMPKR---AVLHEQKAQVLLEIGDAWSSLKAATRATELEPSWAEAWITLGRAQLNFGEPDTAIESFDRALAIKPDSEEAKDDRKTALNLVKRRK 184
BLAST of mRNA_S-ischiensis_contig10.1591.1 vs. uniprot
Match: UPI0002C365A0 (tetratricopeptide repeat protein 33 n=1 Tax=Fragaria vesca subsp. vesca TaxID=101020 RepID=UPI0002C365A0) HSP 1 Score: 90.1 bits (222), Expect = 1.210e-18 Identity = 52/117 (44.44%), Postives = 72/117 (61.54%), Query Frame = 2
Query: 251 EGSLLAESGRFREAMGQWSEALQCDPPTKVTAVLYELLAQAYLGVDEDLAAVKVAHRAVELAPEWAEARVTLGNAQRNFGELALAVGSYREALRLSPSLPEAHEGLEDAEELMRRQR 601
+G+ LAE G++REA+G+W AL P + AVL+E AQ + + + A+K A RA EL P WAEA VTLG AQ NFGE AV S+ +AL + P EA + A L++R++
Sbjct: 82 QGTKLAEDGKYREALGKWESALMLMPKS---AVLHEQKAQVLIEIGDAWNAIKAATRATELEPSWAEAWVTLGRAQLNFGEPDSAVQSFDKALAIKPDSEEARDDRHTAMNLLKRRK 195 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig10.1591.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig10.1591.1 >prot_S-ischiensis_contig10.1591.1 ID=prot_S-ischiensis_contig10.1591.1|Name=mRNA_S-ischiensis_contig10.1591.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=183bp MMHFKLGKKRPRRAPNVAAAFADADDDDGTDHELGTLPPQERTELKVSRLback to top mRNA from alignment at S-ischiensis_contig10:2942735..2944893+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig10.1591.1 ID=mRNA_S-ischiensis_contig10.1591.1|Name=mRNA_S-ischiensis_contig10.1591.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2159bp|location=Sequence derived from alignment at S-ischiensis_contig10:2942735..2944893+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig10:2942735..2944893+ >mRNA_S-ischiensis_contig10.1591.1 ID=mRNA_S-ischiensis_contig10.1591.1|Name=mRNA_S-ischiensis_contig10.1591.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1098bp|location=Sequence derived from alignment at S-ischiensis_contig10:2942735..2944893+ (Schizocladia ischiensis KU_0333)back to top |