mRNA_S-ischiensis_contig10.1588.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig10.1588.1 vs. uniprot
Match: D7G5B8_ECTSI (VHS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B8_ECTSI) HSP 1 Score: 254 bits (649), Expect = 1.930e-78 Identity = 136/279 (48.75%), Postives = 178/279 (63.80%), Query Frame = 3
Query: 114 LSDLGLGG-ELTTPIGSAIEKATSERLIGTDWQANIQICDAINGRPEGPQHAVKALRKRLSNNNPKVVQLTLTLCEACVKNCGRPLHAAMGDREVLGAVVAVTDGGRGWDAQQQALKLIRQWASAFQNQPAWFYRDAYSRLVSQGVRFPEVEEADAPVFTPAAHSQ------------------------PRGSGVAGAAPVPVSAEHVERLGGDLEAVRDKVVLCRQMLKESPGIAQDEALAEVVGFLEACRPRMVDLVEAGMAGKLSEDLFEKCLKV 875
L+++G+ G E TT IGS IEKATSE L+ TDW N+QICD IN + +GP HA KAL++RL ++NPK++ LTLTLCE +KNC RPLH A+G RE L V + +G +G++ + +AL LI+ W AFQ+ + Y + Y RL +QG RFPE +A FTPAA S V AA P + +E+L DL+ V+DK+ LCR+ML ES G+ +D AL+EVVGFLEACRPRMVDLVEAG+ G L ED F KCL++
Sbjct: 4 LANIGIPGTEFTTGIGSLIEKATSESLVNTDWALNMQICDEINHQGDGPSHAAKALKRRLKSDNPKILGLTLTLCETTMKNCSRPLHRALGAREFLAEVAGLCNGQKGYEVRSRALGLIQDWGIAFQSDRSLAYSETYGRLKAQGARFPEATDAATTAFTPAAASYGAXXXXXXXXXXXXXXXXXXXXXXXXXXXVRSAAEAPP--QTMEKLEEDLQMVKDKITLCREMLPESAGVDKDTALSEVVGFLEACRPRMVDLVEAGVGGALGEDTFAKCLQI 280
BLAST of mRNA_S-ischiensis_contig10.1588.1 vs. uniprot
Match: A0A7S2GD13_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GD13_9STRA) HSP 1 Score: 220 bits (561), Expect = 3.960e-67 Identity = 118/246 (47.97%), Postives = 163/246 (66.26%), Query Frame = 3
Query: 144 TTPIGSAIEKATSERLIGTDWQANIQICDAINGRPEGPQHAVKALRKRLSNNNPKVVQLTLTLCEACVKNCGRPLHAAMGDREVLGAVVAVTDGGRGWDAQQQALKLIRQWASAFQNQPAWF--YRDAYSRLVSQGVRFPEVEEADAPVFTPAAHSQPRGSGVAGAAPVPVSAEHVERLGGDLEAVRDKVVLCRQMLKESPGIAQDEALAEVVGFLEACRPRMVDLVEAGMAGKLSEDLFEKCLKV 875
++PI AI KAT L+ TDW AN++ICD IN P+G A + LR+RL N+N +V+ LTL L +AC+KNC +H+A+ +E +G VVA+TDG +GW+ ++QALKLI+ WA F+++ F + + Y +L ++GV FP+ E APVF +P S A PV + + +L DL V +K+ LCR+ML ES GI D+ALAEVVGFLEAC+PRMVDL+E GM G L EDL + L+V
Sbjct: 5 SSPISDAISKATDSMLMNTDWSANLEICDLINSSPDGSVTASQTLRRRLKNDNMRVLTLTLELTDACIKNCSSDMHSAVASKEFMGDVVALTDGKQGWEVREQALKLIQAWAIEFKDRSGPFVVFTETYVQLKTKGVTFPDPEHT-APVFM----EEPPSSQAA--EPVEPT-DPTMKLAQDLSVVAEKIKLCREMLPESSGIETDDALAEVVGFLEACKPRMVDLIECGMQGMLGEDLVSQTLQV 242
BLAST of mRNA_S-ischiensis_contig10.1588.1 vs. uniprot
Match: A0A835Z2K5_9STRA (VHS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2K5_9STRA) HSP 1 Score: 224 bits (572), Expect = 1.960e-66 Identity = 119/271 (43.91%), Postives = 163/271 (60.15%), Query Frame = 3
Query: 78 VPTMDPSKFLPNLSDLGLGGELTTPIGSAIEKATSERLIGTDWQANIQICDAINGRPEGPQHAVKALRKRLSNNNPKVVQLTLTLCEACVKNCGRPLHAAMGDREVLGAVVAVTDGGRGWDAQQQALKLIRQWASAFQNQPAWFYRDAYSRLVSQGVRFPEVEEADAPVF-----TPAAHSQPRGSGVAGAAPVPVSAEHVERLGGDLEAVRDKVVLCRQMLKESPGIAQDEALAEVVGFLEACRPRMVDLVEAGMAGKLSEDLFEKCLKV 875
+PTM S+ + DL GE +T +G + AT+E L+ DW N+ + D I+ EGPQ+A KAL++RL + N KVV LTLTLC+ CVKNC PLHAA+G RE LG V V G G QQQAL+L++QW AF P +Y Y+R+ QG FP E DAP+F PA A+ + +L DL V++K+ LC+Q+L+E+PGI D+ L E++GFLEACRPR+ +L++AG+ G L D+ E CLK+
Sbjct: 24 MPTM--SELSNKVGDLLGTGEFSTYVGEMVMHATAETLVAADWSLNMGVADTIDATVEGPQNAAKALQRRLKSENAKVVSLTLTLCDVCVKNCRPPLHAALGTREFLGHVEDVAGGRLGPQVQQQALELVQQWGEAFAGSPHLYYSSLYTRMREQGAAFPPRPEGDAPLFLPPRAAPAXXXXXXXXXXXXXXXXXXPAQELVKLKLDLVCVQEKLELCQQVLQETPGIEHDDVLRELIGFLEACRPRLHELIQAGIIGHLEPDVLEGCLKI 292
BLAST of mRNA_S-ischiensis_contig10.1588.1 vs. uniprot
Match: A0A7S2W1F0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W1F0_9STRA) HSP 1 Score: 190 bits (483), Expect = 7.360e-53 Identity = 117/277 (42.24%), Postives = 159/277 (57.40%), Query Frame = 3
Query: 147 TPIGSAIEKATSERLIGTDWQANIQICDAIN-GRPEGPQHAVKALRKRLSNNNPKVVQLTLTLCEACVKNCGRPLHAAMGDREVLGAVVAVTDGGRGWDAQQQALKLIRQWASAFQ----NQPAWFYRDAYSRLVSQGVRFPEVEEADAPVFTP---------------------AAHSQPRGSGVAGA-----APVPVSAE---HVERLGGDLEAVRDKVVLCRQMLKESPGIAQDEALAEVVGFLEACRPRMVDLVEAGMAGKLSEDLFEKCLKV 875
+P+ AIE+AT L+ TDW N++ICD IN G A + LR++L ++ PK V L L L +ACVKNC LH A+ + +G VVA+ +G +G++ Q+ +LKLI++W F+ P +F D Y L ++G FPE E+ APVF+P AA S P S + GA AP P +++L DL AV +K+ LCR+ML ESPGI DEAL+EVVGFLEAC+PR+ DL+EAGM LSED+ L V
Sbjct: 16 SPVAQAIERATDPMLLTTDWGKNLEICDMINTGGQAAVTSATRMLRRQLRSDQPKTVMLALELTDACVKNCAFELHRAVASKAFMGDVVALAEGKKGFEPQELSLKLIQEWGKEFKATRSELPGFF--DTYVGLKTKGAAFPE-SESSAPVFSPPPQITAEEPPQTGHASASAPAAASSGPGPSALPGASPGQPAPSPTGGPGEASMDKLRQDLVAVEEKIKLCREMLPESPGIEHDEALSEVVGFLEACQPRLSDLIEAGMQDILSEDILSYTLHV 289
BLAST of mRNA_S-ischiensis_contig10.1588.1 vs. uniprot
Match: F0YK31_AURAN (VHS domain-containing protein n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YK31_AURAN) HSP 1 Score: 182 bits (463), Expect = 1.270e-51 Identity = 103/249 (41.37%), Postives = 148/249 (59.44%), Query Frame = 3
Query: 165 IEKATSERLIG-TDWQANIQICDAINGRPEGPQHAVKALRKRLSNNNPKVVQLTLTLCEACVKNCGRPLHAAMGDREVLGAVVAVTDGGRGWDAQQQALKLIRQWASAFQNQPAW-FYRDAYSRLVSQGVRFPEVEEADAPVFTPAAHSQPRGSG-------VAGAAPVPVSAEHVERLG---GDLEAVRDKVVLCRQMLKESPGIAQDEALAEVVGFLEACRPRMVDLVEAGMAGKLSEDLFEKCLKV 875
+E ATS+ +G D+ N++ICDA+ P A++KRL N+ V L+LTL E CVKNCG +HAA+G +++L + + +GG G + ++QAL L++QW AF+++ A + D Y+ L +G FP E +APVFTP PR G V AA S + L D+E V +K+ LC++M+ SPGI D+ALAEVVGFLEACRPR+ LVE+G++G ++ CLKV
Sbjct: 5 VESATSDVRMGLVDFGVNLEICDALERNPSDAVTMAFAVKKRLGKNDAHVTALSLTLLEMCVKNCGEAVHAAVGQQQILSEIAKLCEGGSGEEVKRQALALVQQWGVAFESRDALPAFADTYTALKVKGFEFPTGNEENAPVFTP-----PRQDGTVVQDDAVYAAALADGSLDRANALAKVRADVEIVAEKIRLCKEMVPNSPGIDHDDALAEVVGFLEACRPRLAILVESGLSGAFGDETLTSCLKV 248
BLAST of mRNA_S-ischiensis_contig10.1588.1 vs. uniprot
Match: A0A6H5L7N0_9PHAE (VHS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7N0_9PHAE) HSP 1 Score: 178 bits (452), Expect = 2.110e-51 Identity = 86/165 (52.12%), Postives = 116/165 (70.30%), Query Frame = 3
Query: 114 LSDLGLGG-ELTTPIGSAIEKATSERLIGTDWQANIQICDAINGRPEGPQHAVKALRKRLSNNNPKVVQLTLTLCEACVKNCGRPLHAAMGDREVLGAVVAVTDGGRGWDAQQQALKLIRQWASAFQNQPAWFYRDAYSRLVSQGVRFPEVEEADAPVFTPAAHS 605
L+++G+ G E TT IGS IEKATSE L+ TDW N+QICD IN + +GP HA KAL++RL ++NPK+++LTLTLCE +KNC RPLH A+G RE L V + +G +G++ + +AL LI+ W AFQ+ + Y + Y RL +QG RFPE +A FTPAA S
Sbjct: 4 LANIGIPGTEFTTGIGSLIEKATSESLVNTDWALNMQICDEINHQGDGPSHAAKALKRRLKSDNPKILELTLTLCETTMKNCSRPLHRALGAREFLAEVAGLCNGQKGYEVRSRALGLIQDWGIAFQSDRSLAYSETYGRLKAQGARFPEATDAATTAFTPAAAS 168
BLAST of mRNA_S-ischiensis_contig10.1588.1 vs. uniprot
Match: A0A812V5W7_SYMMI (TOL1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812V5W7_SYMMI) HSP 1 Score: 178 bits (452), Expect = 8.720e-51 Identity = 105/261 (40.23%), Postives = 153/261 (58.62%), Query Frame = 3
Query: 138 ELTTPIGSAIEKATSERLIGTDWQANIQICDAINGRPEGPQHAVKALRKRLSNNNPKVVQLTLTLCEACVKNC-GRPLHAAMGDREVLGAVVAVTDGGRGWDAQQQALKLIRQWASAFQNQ----PAWFYRDAYSRLVSQGVRFPEVEE----------ADAPVFTPAAHSQPRGSGVAGAAPVPVSAEHVERLGGDLEAVRDKVVLCRQMLKESPGIAQDEALAEVVGFLEACRPRMVDLVEAGMAGKLSEDLFEKCLKV 875
EL+T IG ++ T L+G DW NI+ICD IN G AVKA+ +L +++PKVV L LT+ E C KNC P + +R + +V ++ G +G+D Q+ ALK+I+ W +++ + P +F + Y L ++G+RFPE E+ +D+ P + S +G ++ +L DL V +K+ LCR+ML ESPGI QDE LAEVVGFLEAC+ RM+DL+E G G L+ED+FE CL+V
Sbjct: 11 ELSTRIGVLVKSGTDPLLLGPDWAKNIEICDHINSHNNGAD-AVKAILHQLKSSDPKVVALALTMIETCTKNCVSVPQNI---NRSFMDEMVNISTGRKGFDNQEDALKMIQMWGLSYERRRNELPLFF--ETYMTLKTRGIRFPEPEDQPTSPQSRGNSDSACAHPLSRSVDMAAGN--------QSDDSTKLRNDLGVVMEKIRLCREMLPESPGIQQDEILAEVVGFLEACQERMIDLIETGTQGLLAEDVFELCLRV 257
BLAST of mRNA_S-ischiensis_contig10.1588.1 vs. uniprot
Match: A0A4D9D0H1_9STRA (VHS domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0H1_9STRA) HSP 1 Score: 171 bits (433), Expect = 2.870e-46 Identity = 109/285 (38.25%), Postives = 157/285 (55.09%), Query Frame = 3
Query: 138 ELTTPIGSAIEKATSERLIGTDWQANIQICDAINGRPE-GPQHAVKALRKRLSNNNPKVVQLTLTLCEACVKNCGRP-----LHAAMGDREVLGAVVAVTDGGRGWDAQQQALKLIRQWASAFQNQ-PAWFYRDAYSRLVSQGVRFPEVEEADAPVFTPAAH---------SQPRGSGVAGA----------APVPVSAEHVE-------RLGGDLEAVRDKVVLCRQMLKESPGIAQ-DEALAEVVGFLEACRPRMVDLVEAGMAG-----KLSEDLFEKCLKV 875
+L TP+G I+ ATSE L+ DW N+ +CDA+N E + A++A R++L NPKV+QLTLTL E +KN +P HA +G + L + ++TDG RGW+ ++QAL L++QW +F+++ + Y L QGV+FP +E A +P+FTP A + P GV A A +P +A +L DL VR++ C ML S GI DEALAE VGFLEAC+ R+ +++EAGM G L+E + E L+V
Sbjct: 15 DLLTPVGRLIDDATSETLVTPDWSLNLAVCDAVNSDDEFAGEQAMRAFRRKLREANPKVLQLTLTLLETVIKNADQPGRESRFHALVGSPDFLAKISSLTDGKRGWEVKEQALALLQQWGLSFESRRDTLAFYSTYMDLRLQGVQFPRLE-ASSPIFTPPAQPSPATLPASTTPTSEGVFNAETTEIDKGVPASLPSAAPRARTADRDLTKLQQDLGEVRERARACFAMLSHSEGIESGDEALAEAVGFLEACKERLTEVIEAGMGGGEESITLTEAVLELALEV 298
BLAST of mRNA_S-ischiensis_contig10.1588.1 vs. uniprot
Match: A0A8K1FHN9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHN9_PYTOL) HSP 1 Score: 166 bits (421), Expect = 2.770e-45 Identity = 100/249 (40.16%), Postives = 136/249 (54.62%), Query Frame = 3
Query: 153 IGSAIEKATSERLIGTDWQANIQICDAINGRPEGPQHAVKALRKRLSNNNPKVVQLTLTLCEACVKNCGRPLHAAMGDREVLGAVVAVTDGGRGWDAQQQALKLIRQWASAFQNQPAWFYRDAYSRLVSQGVRFPEVEEADAPVFTPAAHSQPRGSGVAGAAPVPVSA------EHVERLGGDLEAVRDKVVLCRQMLKESPGIAQDEALAEVVGFLEACRPRMVDLVEAGMAGKLSEDLFEKCLKVGG 881
IG IEKAT L +W N+ ICD N V+AL ++L + +P+ +TL L E VKN P+H +G R L V +TDG G+D Q +AL+LI+QWA AF ++D Y L QGV FP+VE D PVFTP S P GS +A AAP ++ + + +L DL V +K+ L R + ++ G EA+ +V+ FL C+PRM L+E G+ GKL E E CL V G
Sbjct: 13 IGELIEKATDASLHEPEWHLNLLICDTANSNAAMCDSIVRALHQKLQSGSPRTSLMTLILAETLVKNGSTPVHTQVGSRAFLQEVAGLTDGSMGFDVQNKALELIKQWADAFGGSSLTAFQDTYRMLKIQGVAFPDVEN-DVPVFTPPT-SVPSGS-MASAAPASSASRPSTREQQIAKLHSDLRVVSEKMELYRDL--KARGETTTEAMEDVLDFLRQCQPRMNTLIEGGIMGKLDERTLEDCLNVSG 256
BLAST of mRNA_S-ischiensis_contig10.1588.1 vs. uniprot
Match: A0A2D4BCX1_PYTIN (VHS domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BCX1_PYTIN) HSP 1 Score: 166 bits (419), Expect = 3.680e-45 Identity = 97/249 (38.96%), Postives = 135/249 (54.22%), Query Frame = 3
Query: 165 IEKATSERLIGTDWQANIQICDAINGRPEGPQHAVKALRKRLSNNNPKVVQLTLTLCEACVKNCGRPLHAAMGDREVLGAVVAVTDGGRGWDAQQQALKLIRQWASAFQNQPAWFYRDAYSRLVSQGVRFPEVEEADAPVFTPAAHSQPRGSGVAGAAPVPVSA------------EHVERLGGDLEAVRDKVVLCRQMLKESPGIAQDEALAEVVGFLEACRPRMVDLVEAGMAGKLSEDLFEKCLKV 875
IEKAT++ L G +W N+ ICDA+N P V L+++L + +P+V L L + E VKN LH + R L + A+TDG G+D Q +AL+LI+QWA AF ++D Y L QGV FPEVE DAPVFTP S P SG + + S + + +L DL+ V +K+ L R + S G E + +V+ F+ C+PRM L+E G+ GKL E FE+CL V
Sbjct: 15 IEKATADHLSGPEWHLNLMICDAVNANPAISDDVVHILQRKLQSGSPRVALLALIVVETLVKNGSSALHTQVASRTFLQEIAAMTDGSLGFDVQNKALELIKQWADAFGGSNLTAFQDTYRMLKIQGVAFPEVEH-DAPVFTPPT-SVPHQSGSSRSINSAASGHATSRNRGSTREQQIAKLHSDLKVVLEKIKLFRDL--RSSGQQDSETMEDVLDFMRQCQPRMNTLIEGGVMGKLDERTFEECLNV 259 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig10.1588.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig10.1588.1 >prot_S-ischiensis_contig10.1588.1 ID=prot_S-ischiensis_contig10.1588.1|Name=mRNA_S-ischiensis_contig10.1588.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=273bp MDPSKFLPNLSDLGLGGELTTPIGSAIEKATSERLIGTDWQANIQICDAIback to top mRNA from alignment at S-ischiensis_contig10:2923901..2930890+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig10.1588.1 ID=mRNA_S-ischiensis_contig10.1588.1|Name=mRNA_S-ischiensis_contig10.1588.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=6990bp|location=Sequence derived from alignment at S-ischiensis_contig10:2923901..2930890+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig10:2923901..2930890+ >mRNA_S-ischiensis_contig10.1588.1 ID=mRNA_S-ischiensis_contig10.1588.1|Name=mRNA_S-ischiensis_contig10.1588.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1638bp|location=Sequence derived from alignment at S-ischiensis_contig10:2923901..2930890+ (Schizocladia ischiensis KU_0333)back to top |